Citrus Sinensis ID: 035655

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670
Protein Sequence
MALTVSFALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEIISTDNITTSQLSSSFGVISSNSIEAGR
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHcccccccEEEccccccccccccEEEccccccccccEEEcccccccEEEEEEEcccccccccccccccccccccEEEEEEEEEEccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEEEccccccccccccccEEEEEEcccEEEcccccccccccccccccccccccEEEEEEEEcccEEEEEEEEEccccccccccccccccccccccccccccccccEEEEEEccccccccccEEEcccccccccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccEEcHHHHHHHHHccccccccccccccEEEEEEcccHHHHHHHHHHHHHcccccccccEEEEEccccEEEEEEEccccccHHHHccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEccccccccccccccEEEccccccccccccccccccHHHHHHccccccccccccHHHHHHHHHccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccccccccccccccEEcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccEEccEEEEccccEEEEEcccccccccEccccccEEEcccccccccccEEEEEEEEEEEEEcccccccccEEEEEEEcccccccccHHHHcEEEccccccccccEEEEEEEEcccccccccccccccEEEEEccccccccccccEEcccccEEEEEEccccEEEEEEcccccEEEEEEEcccccccccccccccccccEEEEEEccHHHccccEEEEEEccccccccEEEEEEEEEccccccccccHHHccccccccccccccHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcEEEccccccHHHEEEcHHHcEEEccccccccccccccEEEccEEEcHHHccHHHHHHccccHHHHHHHHHHHHHHHHccccccccccEEHHHHHHHHHHcccHHHHccHHHcccccHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccccccccccccEEccccccccc
Coil and Loop (DISEMBL)
MALTVSFALRLFFFPVIAALSQQKEEFIFNgfnetktnqglitrerasilkpsgalrltdnahnvighafynkpiqmldkstslsskpnassfstCFVFQIvtpnsgqggfglaftvspqpsfpggkaehylgilnstndhkpsnhlfaiefdtvngynetsdsqgnhvginvnsmksiklepaayyengtkedftlesgdpvqawidydgvnrLVNVTIcpmnkknklsfhfgkpsqpllslpldlspafqetmyvgfsastgrkvsshFILGwsfsmngaapslnlsqipslpiersssnsFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILedweldcphrfrysdlytatkgfkqsevigtggfgevykgvlpTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVydyipngsldsllfdnenfVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDvksgnvlidadmnarlgdfglarlfdhgkishttnvvgtigyiapelartgkascstdvFAYGVLLLEIatgrrpidsdhfILVDWVLEFQHLGQvldvvdpnlgssYVVAEMELVLQLGLLcshqkaearPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEIIstdnittsqlsssfgvissnsieagr
Flexible Loop (DISEMBL)
MALTVSFALRLFFFPVIAALSQQKEEFIFNGFnetktnqgliTRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATkgfkqsevigtggfGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEIISTdnittsqlsssfgvissnsieagr
Low Complexity Region (SEG)
MALTVSFALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKpsqpllslpldlspAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEIISTDNITTSQLsssfgvissnsIEAGR
Disordered region (IsUnstruct)
**LTVSFALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQM***************FSTCFVFQIVTPNSGQGGFGLAFTVS*******GKAEHYLGILNSTN****SNHLFAIEFDTVNGYN********HVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAA********************FSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSS***********YLEIIST************************
Disordered Region (DISOPRED)
*ALTVSFALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLD**********ASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKL*****KPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNL*****************LQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIID***************************************NS*EAGR
Disordered Region (DISEMBL)
MALTVSFALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLD***********SSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEIISTDNITTSQLSSSFGVISSNSIEAGR
Disordered Region (DISPRO)
MALTVSFALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEI**T************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALTVSFALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEIISTDNITTSQLSSSFGVISSNSIEAGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	670	2.2.26 [Sep-21-2011]
Q9M020	688	Lectin-domain containing	yes	no	0.944	0.920	0.511	0.0
Q66GN2	691	Lectin-domain containing	no	no	0.941	0.913	0.509	0.0
Q9SR87	693	Probable L-type lectin-do	no	no	0.910	0.880	0.523	1e-180
Q9M021	682	L-type lectin-domain cont	no	no	0.919	0.903	0.512	1e-176
Q9M345	677	L-type lectin-domain cont	no	no	0.862	0.853	0.461	1e-154
O80939	675	L-type lectin-domain cont	no	no	0.883	0.877	0.457	1e-153
O81292	674	L-type lectin-domain cont	no	no	0.894	0.888	0.454	1e-152
O81291	669	L-type lectin-domain cont	no	no	0.865	0.866	0.455	1e-151
Q9SZD5	669	L-type lectin-domain cont	no	no	0.859	0.860	0.457	1e-150
Q9M2S4	684	L-type lectin-domain cont	no	no	0.867	0.849	0.452	1e-148

>sp|Q9M020|LRK63_ARATH Lectin-domain containing receptor kinase VI.3 OS=Arabidopsis thaliana GN=LECRK63 PE=2 SV=1

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/680 (51%), Positives = 450/680 (66%), Gaps = 47/680 (6%)

Query: 9   LRLFFFPVIAALSQQ------KEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA 62
           L LF    I   +Q+      K EFIF GF+  ++N   I    A+ +K  G LRLTD  
Sbjct: 2   LVLFLLLTIPTRAQRTTTETPKTEFIFRGFSGNQSN---IVTTGAATIKLDGLLRLTDRN 58

Query: 63  HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS 122
            NV G +FY+KP+++L+ +TS S+     SFST FVF I+  +S  GGFG  FT+SP P 
Sbjct: 59  SNVTGTSFYHKPVRLLETNTS-STNSTIRSFSTSFVFVIIPTSSSNGGFGFTFTLSPTPD 117

Query: 123 FPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLE 182
             G ++  YLG+LN  ND   +NH+FA+EFDTV G+ + +D  GNH+G+N NS+ S   E
Sbjct: 118 RTGAESAQYLGLLNKANDGNSTNHVFAVEFDTVQGFKDGADRTGNHIGLNFNSLTSDVQE 177

Query: 183 PAAYYEN---GTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQP 239
           P  YY+N     KEDF L+SGDP++A +DYDG  + +N+T+ P N K++       P +P
Sbjct: 178 PVVYYDNEDPNRKEDFPLQSGDPIRAILDYDGPTQTLNLTVYPANLKSR-------PVRP 230

Query: 240 LLSLPL-DLSPAFQETMYVGFSASTGRKVSS-HFILGWSFSMNGAAPSLNLSQI---PSL 294
           L+S P+  LS   QE MYVGF+A+TGR  SS H+++GWSFS  G   + +   +   P  
Sbjct: 231 LISRPVPKLSQIVQEEMYVGFTAATGRDQSSAHYVMGWSFSSGGDLLTEDTLDLLELPRP 290

Query: 295 PIERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYR-RIAQFEILEDWELDCPHRFR 353
           P   +    ++ Q+  LI ALS V VILL  L  F +Y+ R+ Q E+LEDWE++ PHR R
Sbjct: 291 PPNTAKKRGYNSQVLALIVALSGVTVILLALLFFFVMYKKRLQQGEVLEDWEINHPHRLR 350

Query: 354 YSDLYTATKGFKQSEVIGTGGFGEVYKG--------------VLPTRM---REFAAEIES 396
           Y DLY AT GFK++ ++GTGGFG V++G              + P  M   REF AEIES
Sbjct: 351 YKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIES 410

Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD---NENFVLSWEQRFNIIKG 453
           LGRLRHK+LVNLQGWCK+K DLLL+YDYIPNGSLDSLL+        VLSW  RF I KG
Sbjct: 411 LGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKG 470

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA+GLLYLHEEWE+VVIHRD+K  NVLI+ DMN RLGDFGLARL++ G  S+TT VVGTI
Sbjct: 471 IASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTI 530

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV 573
           GY+APELAR GK+S ++DVFA+GVLLLEI +GRRP DS  F L DWV+E    G++L  V
Sbjct: 531 GYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTFFLADWVMELHARGEILHAV 590

Query: 574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDN-WSSLDSQ 632
           DP LG  Y   E  L L +GLLC HQ+  +RP+MR VLRYLNGD+ +P IDN W   DS 
Sbjct: 591 DPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDVPEIDNDWGYSDSS 650

Query: 633 RSEMNSRYLEIISTDNITTS 652
           RS++ S +   +S+D  ++S
Sbjct: 651 RSDLGSNFEGYVSSDRASSS 670

Involved in negative regulation of abscisic acid response in seed germination.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q66GN2|LRK64_ARATH Lectin-domain containing receptor kinase VI.4 OS=Arabidopsis thaliana GN=LECRK64 PE=2 SV=1

 Score =  638 bits (1646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/675 (50%), Positives = 453/675 (67%), Gaps = 44/675 (6%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSS 86
           FIF+GF   K NQ  I  +  S +  +G LRLTD   +V+G AFY+KP+++LD   S S+
Sbjct: 30  FIFHGF---KGNQSEIHMQGDSTITSNGLLRLTDRNSDVVGTAFYHKPVRLLD---SNST 83

Query: 87  KPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNH 146
                SFST F+F I + ++  GGFG  FT+SP P+      E Y+G+LN  ND   SNH
Sbjct: 84  NTTVRSFSTSFIFIIPSSSTSNGGFGFTFTLSPTPNRTDADPEQYMGLLNERNDGNSSNH 143

Query: 147 LFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYEN--GTKEDFTLESGDPVQ 204
           +FA+EFDTV G+ + ++  GNH+G+N NS+ S   EP AY+ N    KE+F L SG+P+Q
Sbjct: 144 VFAVEFDTVQGFKDGTNRIGNHIGLNFNSLSSDVQEPVAYFNNNDSQKEEFQLVSGEPIQ 203

Query: 205 AWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPL-DLSPAFQETMYVGFSAST 263
            ++DY G  + +N+T+ P     +L +   KP  PL+S  +  LS    + M+VGF+A+T
Sbjct: 204 VFLDYHGPTKTLNLTVYP----TRLGY---KPRIPLISREVPKLSDIVVDEMFVGFTAAT 256

Query: 264 GR--KVSSHFILGWSFSMNGAAP---SLNLSQIPSLPIERSSSNSFSLQIKILIAALSTV 318
           GR  + S+H+++GWSF+  G  P    L++SQ+P  P  ++    ++ ++  LI ALSTV
Sbjct: 257 GRHGQSSAHYVMGWSFASGGEHPLAAMLDISQLPPPPPNKAKKRGYNGKVIALIVALSTV 316

Query: 319 AVILLGTLLIFKLYR-RIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGE 377
             I+L  L +F +Y+ R+ Q EILEDWE+D PHRFRY DLY AT+GFK++ V+GTGGFG 
Sbjct: 317 ISIMLVLLFLFMMYKKRMQQEEILEDWEIDHPHRFRYRDLYKATEGFKENRVVGTGGFGI 376

Query: 378 VYKG-------------VLPTRM---REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV 421
           VY+G             + P  M   REF AEIESLGRLRHK+LVNLQGWCK + DLLL+
Sbjct: 377 VYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLI 436

Query: 422 YDYIPNGSLDSLLFDN---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN 478
           YDYIPNGSLDSLL+        VLSW  RF I KGIA+GLLYLHEEWEQ+VIHRDVK  N
Sbjct: 437 YDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSN 496

Query: 479 VLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVL 538
           VLID+DMN RLGDFGLARL++ G  S TT VVGTIGY+APELAR G +S ++DVFA+GVL
Sbjct: 497 VLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVL 556

Query: 539 LLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSH 598
           LLEI +GR+P DS  F + DWV+E Q  G++L  +DP LGS Y   E  L L +GLLC H
Sbjct: 557 LLEIVSGRKPTDSGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCH 616

Query: 599 QKAEARPTMRQVLRYLNGDELLPII-DNWSSLDSQRSEMNSRYLEIISTDNITTSQLSSS 657
            K E+RP MR VLRYLN DE +P I DNW   DS R+++ S+ +  IS+D  ++S   +S
Sbjct: 617 HKPESRPLMRMVLRYLNRDEDVPEIHDNWGYSDSSRTDLGSKLVGYISSDRASSSHSHTS 676

Query: 658 FGV--ISSNSIEAGR 670
             +  ISS S+ +GR
Sbjct: 677 SSLTRISSTSLISGR 691

Involved in negative regulation of abscisic acid response in seed germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SR87|LRK61_ARATH Probable L-type lectin-domain containing receptor kinase VI.1 OS=Arabidopsis thaliana GN=LECRK61 PE=2 SV=1

 Score =  631 bits (1628), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 339/648 (52%), Positives = 444/648 (68%), Gaps = 38/648 (5%)

Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLS 85
           +F F GF E +T+  + T   ++I   +  LRLT+   NV G AFY KPI++  +  + S
Sbjct: 35  KFTFIGFKENQTD--IQTEGASTIQHDNDLLRLTNRKQNVTGTAFYRKPIRL--RELTNS 90

Query: 86  SKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSN 145
           S     SFST FVF I+  + G GGFG  FT+SP P+ PG ++  YLG+LN TN+  PSN
Sbjct: 91  SDIKVCSFSTSFVFVILPSSPGNGGFGFTFTLSPTPNRPGAESAQYLGLLNRTNNGNPSN 150

Query: 146 HLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYEN-GTKEDFTLESGDPVQ 204
           H+FA+EFDTV G+ + +D +GNH+G+N N++ S   EP  YY+    KEDF LESG+P++
Sbjct: 151 HVFAVEFDTVQGFKDGADRRGNHIGLNFNNLSSNVQEPLIYYDTEDRKEDFQLESGEPIR 210

Query: 205 AWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPL-DLSPAFQETMYVGFSAST 263
             IDYDG +  +NVTI P     +L F   KP +PL+S  + +LS   ++ MYVGF+A+T
Sbjct: 211 VLIDYDGSSETLNVTIYP----TRLEF---KPKKPLISRRVSELSEIVKDEMYVGFTAAT 263

Query: 264 GRKVSS-HFILGWSFSMNGAAPS---LNLSQIPSLPIERSSSNSFSLQIKILIAALSTVA 319
           G+  SS H+++GWSFS  G  P    L +S++P  P   S+   ++ Q+ +LI ALS V 
Sbjct: 264 GKDQSSAHYVMGWSFSSCGENPMADWLEISRLPP-PPRLSNKKGYNSQVIVLIVALSIVT 322

Query: 320 VILLGTLLIFKLY-RRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEV 378
           ++LL  L IF +Y RRI + + LEDWE+D PHRFRY DLY ATK FK+SE+IGTGGFG V
Sbjct: 323 LVLLVLLFIFVMYKRRIQEEDTLEDWEIDYPHRFRYRDLYLATKKFKESEIIGTGGFGIV 382

Query: 379 YKGVLPTR---------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD 423
           Y+G L +                +REF AEIESLGRL HK+LVNLQGWCK K +LLL+YD
Sbjct: 383 YRGNLSSSGPIAVKKITSNSLQGVREFMAEIESLGRLGHKNLVNLQGWCKHKNELLLIYD 442

Query: 424 YIPNGSLDSLLFDN---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVL 480
           YIPNGSLDSLL+        VL W+ RF IIKGIA+GLLYLHEEWEQ+V+HRDVK  NVL
Sbjct: 443 YIPNGSLDSLLYQTPRRNGIVLPWDVRFEIIKGIASGLLYLHEEWEQIVVHRDVKPSNVL 502

Query: 481 IDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLL 540
           ID DMNA+LGDFGLARL++ G ++ TT +VGT+GY+APEL R GK S ++DVFA+GVLLL
Sbjct: 503 IDEDMNAKLGDFGLARLYERGTLTQTTKIVGTLGYMAPELTRNGKGSTASDVFAFGVLLL 562

Query: 541 EIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQK 600
           EI  G +P ++++F L DWV+EF   G +L VVD NLGSS+   E +L L +GLLC HQK
Sbjct: 563 EIVCGNKPTNAENFFLADWVMEFHTNGGILCVVDQNLGSSFNGREAKLALVVGLLCCHQK 622

Query: 601 AEARPTMRQVLRYLNGDELLPIID-NWSSLDSQRSEMNSRYLEIISTD 647
            + RP+MR VLRYLNG+E +P ID NW   DS R +  S  +  +S+D
Sbjct: 623 PKFRPSMRMVLRYLNGEENVPQIDENWGFSDSSRDDHKSNVVGYVSSD 670

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M021|LRK62_ARATH L-type lectin-domain containing receptor kinase VI.2 OS=Arabidopsis thaliana GN=LECRK62 PE=2 SV=1

 Score =  619 bits (1595), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 339/662 (51%), Positives = 438/662 (66%), Gaps = 46/662 (6%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSS 86
           F F GFN    NQ  I  E A+++KP G LRLTD   NV G AFY+KP+++L+++   S+
Sbjct: 33  FAFRGFN---GNQSKIRIEGAAMIKPDGLLRLTDRKSNVTGTAFYHKPVRLLNRN---ST 86

Query: 87  KPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNH 146
                SFST FVF I+  +S   GFG  FT+SP P      +  YLG+ N  N+  P NH
Sbjct: 87  NVTIRSFSTSFVFVIIPSSSSNKGFGFTFTLSPTPYRLNAGSAQYLGVFNKENNGDPRNH 146

Query: 147 LFAIEFDTVNG-YNETSDSQGNHVGINVNSMKSIKLEPAAYYEN---GTKEDFTLESGDP 202
           +FA+EFDTV G  ++ +D  GN +G+N NS  S   EP  YY N     KEDF LESG+P
Sbjct: 147 VFAVEFDTVQGSRDDNTDRIGNDIGLNYNSRTSDLQEPVVYYNNDDHNKKEDFQLESGNP 206

Query: 203 VQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPL-DLSPAFQETMYVGFSA 261
           +QA ++YDG  +++NVT+ P     +L F   KP++PL+S  +  L    QE MYVGF+A
Sbjct: 207 IQALLEYDGATQMLNVTVYPA----RLGF---KPTKPLISQHVPKLLEIVQEEMYVGFTA 259

Query: 262 STGR-KVSSHFILGWSFSMNGAAP---SLNLSQIPSLPIERSSSNSFSLQIKILIAALST 317
           STG+ + S+H+++GWSFS  G  P    L LS++P  P  ++     + Q+ ++I ALS 
Sbjct: 260 STGKGQSSAHYVMGWSFSSGGERPIADVLILSELPPPPPNKAKKEGLNSQVIVMIVALSA 319

Query: 318 VAVILLGTLLIFKLYR-RIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFG 376
           V +++L  L  F +Y+ R+ Q E LEDWE+D P R RY DLY AT GFK++ +IGTGGFG
Sbjct: 320 VMLVMLVLLFFFVMYKKRLGQEETLEDWEIDHPRRLRYRDLYVATDGFKKTGIIGTGGFG 379

Query: 377 EVYKGVLPTR---------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV 421
            V+KG LP                 +REF AEIESLG+LRHK+LVNLQGWCK K DLLL+
Sbjct: 380 TVFKGKLPNSDPIAVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLI 439

Query: 422 YDYIPNGSLDSLLFD---NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN 478
           YDYIPNGSLDSLL+        VLSW  RF I KGIA+GLLYLHEEWE++VIHRDVK  N
Sbjct: 440 YDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSN 499

Query: 479 VLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVL 538
           VLID+ MN RLGDFGLARL++ G +S TT +VGTIGY+APEL+R G  S ++DVFA+GVL
Sbjct: 500 VLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVL 559

Query: 539 LLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSH 598
           LLEI  GR+P DS  F LVDWV+E    G++L  +DP LGS Y   E  L L +GLLC H
Sbjct: 560 LLEIVCGRKPTDSGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCH 619

Query: 599 QKAEARPTMRQVLRYLNGDELLPIIDN-WSSLDSQRSEMNSRYLEIISTDNIT----TSQ 653
           QK  +RP+MR VLRYLNG+E +P ID+ W    S RSE  S+ +  +S+ +IT    TS+
Sbjct: 620 QKPASRPSMRIVLRYLNGEENVPEIDDEWGYSKSSRSEFGSKLVGYVSSTSITRVSSTSR 679

Query: 654 LS 655
           +S
Sbjct: 680 IS 681

Involved in negative regulation of abscisic acid response in seed germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M345|LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1

 Score =  545 bits (1404), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 290/629 (46%), Positives = 400/629 (63%), Gaps = 51/629 (8%)

Query: 21  SQQKEEFIFNGFNETKTN---QGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQM 77
           S Q   F +NGF+   T+   QGL T      + P+G L+LT+ +    GHAF  + I+ 
Sbjct: 21  SSQNLNFTYNGFHPPLTDISLQGLAT------VTPNGLLKLTNTSVQKTGHAFCTERIRF 74

Query: 78  LDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNS 137
            D     S   N SSFST FVF I +      G G+AF V+P    P      Y+G+ N 
Sbjct: 75  KD-----SQNGNVSSFSTTFVFAIHSQIPTLSGHGIAFVVAPTLGLPFALPSQYIGLFNI 129

Query: 138 TNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTK-EDFT 196
           +N+   +NH+FA+EFDT+   +E  D   NHVGI++N ++S     A Y ++  K ++ +
Sbjct: 130 SNNGNDTNHIFAVEFDTIQS-SEFGDPNDNHVGIDLNGLRSANYSTAGYRDDHDKFQNLS 188

Query: 197 LESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY 256
           L S   +Q WIDYD  +  ++VT+ P +          KP +PL+S   DLS    E MY
Sbjct: 189 LISRKRIQVWIDYDNRSHRIDVTVAPFDSD--------KPRKPLVSYVRDLSSILLEDMY 240

Query: 257 VGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALS 316
           VGFS++TG  +S HF++GWSF +NG AP L+LS++P LP       S   +I + + +LS
Sbjct: 241 VGFSSATGSVLSEHFLVGWSFRLNGEAPMLSLSKLPKLPRFEPRRISEFYKIGMPLISLS 300

Query: 317 TVAVILLGTLLIFKLYRRIAQFEI-LEDWELD-CPHRFRYSDLYTATKGFKQSEVIGTGG 374
            +  I+    L F + RR  ++E  L+DWE +   +RFR+ +LY ATKGFK+ +++G+GG
Sbjct: 301 LIFSIIF---LAFYIVRRKKKYEEELDDWETEFGKNRFRFKELYHATKGFKEKDLLGSGG 357

Query: 375 FGEVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDL 418
           FG VY+G+LPT                 M+EF AEI S+GR+ H++LV L G+C+R+ +L
Sbjct: 358 FGRVYRGILPTTKLEVAVKRVSHDSKQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGEL 417

Query: 419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN 478
           LLVYDY+PNGSLD  L++N    L W+QR  IIKG+A+GL YLHEEWEQVVIHRDVK+ N
Sbjct: 418 LLVYDYMPNGSLDKYLYNNPETTLDWKQRSTIIKGVASGLFYLHEEWEQVVIHRDVKASN 477

Query: 479 VLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVL 538
           VL+DAD N RLGDFGLARL+DHG    TT+VVGT+GY+APE +RTG+A+ +TDV+A+G  
Sbjct: 478 VLLDADFNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHSRTGRATTTTDVYAFGAF 537

Query: 539 LLEIATGRRPID-----SDHFILVDWVLEFQHLGQVLDVVDPNLGSS-YVVAEMELVLQL 592
           LLE+ +GRRPI+      D F+LV+WV      G +++  DP LGSS Y + E+E+VL+L
Sbjct: 538 LLEVVSGRRPIEFHSASDDTFLLVEWVFSLWLRGNIMEAKDPKLGSSGYDLEEVEMVLKL 597

Query: 593 GLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           GLLCSH    ARP+MRQVL+YL GD  LP
Sbjct: 598 GLLCSHSDPRARPSMRQVLQYLRGDMALP 626

Required during pollen development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=1 SV=1

 Score =  541 bits (1394), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 293/641 (45%), Positives = 397/641 (61%), Gaps = 49/641 (7%)

Query: 21  SQQKEEFIFN-GFNETK--TNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQM 77
           S Q   F +N GFN     + QG+ T      + P+G L+LT+      GHAFY KPI+ 
Sbjct: 21  SSQSLNFAYNNGFNPPTDLSIQGITT------VTPNGLLKLTNTTVQKTGHAFYTKPIRF 74

Query: 78  LDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNS 137
            D     S     SSFST FVF I +  +   G G+AF V+P  S P G    Y+G+ N 
Sbjct: 75  KD-----SPNGTVSSFSTSFVFAIHSQIAILSGHGIAFVVAPNASLPYGNPSQYIGLFNL 129

Query: 138 TNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYY-ENGTKEDFT 196
            N+   +NH+FA+E DT+    E +D+  NHVGI++NS+KS++  PA Y+ E G  ++ T
Sbjct: 130 ANNGNETNHVFAVELDTILS-TEFNDTNDNHVGIDINSLKSVQSSPAGYWDEKGQFKNLT 188

Query: 197 LESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY 256
           L S  P+Q W+DYDG    ++VT+ P N+         KP++PL++   DLS    + MY
Sbjct: 189 LISRKPMQVWVDYDGRTNKIDVTMAPFNED--------KPTRPLVTAVRDLSSVLLQDMY 240

Query: 257 VGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALS 316
           VGFS++TG  +S H+ILGWSF +N  AP L LS++P LP       S   +I + + +L 
Sbjct: 241 VGFSSATGSVLSEHYILGWSFGLNEKAPPLALSRLPKLPRFEPKRISEFYKIGMPLISLF 300

Query: 317 TVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFG 376
            +   +     I +  R+ A+     + E    +RFR+ DLY ATKGFK+  ++GTGGFG
Sbjct: 301 LIFSFIFLVCYIVRRRRKFAEELEEWEKEFG-KNRFRFKDLYYATKGFKEKGLLGTGGFG 359

Query: 377 EVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL 420
            VYKGV+P                  M+EF AEI S+GR+ H++LV L G+C+R+ +LLL
Sbjct: 360 SVYKGVMPGTKLEIAVKRVSHESRQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGELLL 419

Query: 421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVL 480
           VYDY+PNGSLD  L++     L+W+QR  +I G+A+GL YLHEEWEQVVIHRDVK+ NVL
Sbjct: 420 VYDYMPNGSLDKYLYNTPEVTLNWKQRIKVILGVASGLFYLHEEWEQVVIHRDVKASNVL 479

Query: 481 IDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLL 540
           +D ++N RLGDFGLARL+DHG    TT+VVGT+GY+APE  RTG+A+ +TDVFA+G  LL
Sbjct: 480 LDGELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHTRTGRATMATDVFAFGAFLL 539

Query: 541 EIATGRRPID-----SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLL 595
           E+A GRRPI+      + F+LVDWV    + G +L   DPN+GS     E+E+VL+LGLL
Sbjct: 540 EVACGRRPIEFQQETDETFLLVDWVFGLWNKGDILAAKDPNMGSECDEKEVEMVLKLGLL 599

Query: 596 CSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEM 636
           CSH    ARP+MRQVL YL GD  LP +   S LD   S M
Sbjct: 600 CSHSDPRARPSMRQVLHYLRGDAKLPEL---SPLDLSGSGM 637

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81292|LRK43_ARATH L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana GN=LECRK43 PE=2 SV=1

 Score =  537 bits (1384), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/656 (45%), Positives = 398/656 (60%), Gaps = 57/656 (8%)

Query: 21  SQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDK 80
           S Q   F +N F+   TN   I+ +  + +  +G L+LTD      GHAFY +PI+  D 
Sbjct: 23  SSQSLNFTYNSFHRPPTN---ISIQGIATVTSNGILKLTDKTVISTGHAFYTEPIRFKD- 78

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
               S     SSFST FV  I +      G G+AF ++P P      A  YLG+ +STN+
Sbjct: 79  ----SPNDTVSSFSTTFVIGIYSGIPTISGHGMAFFIAPNPVLSSAMASQYLGLFSSTNN 134

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTK-EDFTLES 199
              +NH+ A+EFDT+    E  D+  NHVGIN+NS+ S+K     Y++   +  + TL S
Sbjct: 135 GNDTNHILAVEFDTIMN-PEFDDTNDNHVGININSLTSVKSSLVGYWDEINQFNNLTLIS 193

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF 259
              +Q W+DYD     ++VT+ P  +         KP + L+S+  DLS  F + MY+GF
Sbjct: 194 RKRMQVWVDYDDRTNQIDVTMAPFGEV--------KPRKALVSVVRDLSSVFLQDMYLGF 245

Query: 260 SASTGRKVSSHFILGWSFSMNG-AAPSLNLSQIPSLP------IERSSSNSFSLQIKILI 312
           SA+TG  +S HF+ GWSF + G  AP L LS++P  P      ++R   N   L   +LI
Sbjct: 246 SAATGYVLSEHFVFGWSFMVKGKTAPPLTLSKVPKFPRVGPTSLQRFYKNRMPLFSLLLI 305

Query: 313 AALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDC-PHRFRYSDLYTATKGFKQSEVIG 371
             L  V++I L   + F + RR    E  EDWE +   +R R+ DLY ATKGFK  +++G
Sbjct: 306 PVLFVVSLIFL---VRFIVRRRRKFAEEFEDWETEFGKNRLRFKDLYYATKGFKDKDLLG 362

Query: 372 TGGFGEVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +GGFG VY+GV+PT                 ++EF AEI S+GR+ H++LV L G+C+R+
Sbjct: 363 SGGFGRVYRGVMPTTKKEIAVKRVSNESRQGLKEFVAEIVSIGRMSHRNLVPLLGYCRRR 422

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
            +LLLVYDY+PNGSLD  L+D     L W+QRFN+I G+A+GL YLHEEWEQVVIHRD+K
Sbjct: 423 DELLLVYDYMPNGSLDKYLYDCPEVTLDWKQRFNVIIGVASGLFYLHEEWEQVVIHRDIK 482

Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + NVL+DA+ N RLGDFGLARL DHG    TT VVGT GY+AP+  RTG+A+ +TDVFA+
Sbjct: 483 ASNVLLDAEYNGRLGDFGLARLCDHGSDPQTTRVVGTWGYLAPDHVRTGRATTATDVFAF 542

Query: 536 GVLLLEIATGRRPID-----SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
           GVLLLE+A GRRPI+      +  +LVD V  F   G +LD  DPNLGS Y   E+E VL
Sbjct: 543 GVLLLEVACGRRPIEIEIESDESVLLVDSVFGFWIEGNILDATDPNLGSVYDQREVETVL 602

Query: 591 QLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRS----EMNSRYLE 642
           +LGLLCSH   + RPTMRQVL+YL GD  LP   + S LD + S     MN R+ E
Sbjct: 603 KLGLLCSHSDPQVRPTMRQVLQYLRGDATLP---DLSPLDFRGSGKMLGMNHRFSE 655

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81291|LRK44_ARATH L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana GN=LECRK44 PE=3 SV=1

 Score =  536 bits (1382), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 286/628 (45%), Positives = 389/628 (61%), Gaps = 48/628 (7%)

Query: 21  SQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDK 80
           S Q  +F +NGF    T+  ++     + + P+G L+LT+      GHAFY KPI+  D 
Sbjct: 22  SSQIIDFTYNGFRPPPTDISILG---IATITPNGLLKLTNTTMQSTGHAFYTKPIRFKD- 77

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
               S     SSFST FVF I +        G+AF ++P P  P G    YLG+ N TN+
Sbjct: 78  ----SPNGTVSSFSTTFVFAIHS--QIPIAHGMAFVIAPNPRLPFGSPLQYLGLFNVTNN 131

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYY-ENGTKEDFTLES 199
               NH+FA+E DT+    E +D+  NHVGI++NS+ S+K  PA Y+ EN    + TL S
Sbjct: 132 GNVRNHVFAVELDTIMNI-EFNDTNNNHVGIDINSLNSVKSSPAGYWDENDQFHNLTLIS 190

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF 259
              +Q W+D+DG   L++VT+ P  +         KP +PL+S+  DLS    + M+VGF
Sbjct: 191 SKRMQVWVDFDGPTHLIDVTMAPFGEV--------KPRKPLVSIVRDLSSVLLQDMFVGF 242

Query: 260 SASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNS----FSLQIKILIAAL 315
           S++TG  VS  F+LGWSF +NG A  L LS++P LP+           +   + ++   L
Sbjct: 243 SSATGNIVSEIFVLGWSFGVNGEAQPLALSKLPRLPVWDLKPTRVYRFYKNWVPLISLLL 302

Query: 316 STVAVILLGTLLIFKLYRRIAQFEILEDWELDC-PHRFRYSDLYTATKGFKQSEVIGTGG 374
               +I+     I K  R+ A  E +EDWE +   +R R+ DLY ATKGFK   ++G+GG
Sbjct: 303 IPFLLIIFLVRFIMKRRRKFA--EEVEDWETEFGKNRLRFKDLYYATKGFKDKNILGSGG 360

Query: 375 FGEVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDL 418
           FG VYKG++P                  ++EF AEI S+G++ H++LV L G+C+R+ +L
Sbjct: 361 FGSVYKGIMPKTKKEIAVKRVSNESRQGLKEFVAEIVSIGQMSHRNLVPLVGYCRRRDEL 420

Query: 419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN 478
           LLVYDY+PNGSLD  L+++    L W+QRF +I G+A+ L YLHEEWEQVVIHRDVK+ N
Sbjct: 421 LLVYDYMPNGSLDKYLYNSPEVTLDWKQRFKVINGVASALFYLHEEWEQVVIHRDVKASN 480

Query: 479 VLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVL 538
           VL+DA++N RLGDFGLA+L DHG    TT VVGT GY+AP+  RTG+A+ +TDVFA+GVL
Sbjct: 481 VLLDAELNGRLGDFGLAQLCDHGSDPQTTRVVGTWGYLAPDHIRTGRATTTTDVFAFGVL 540

Query: 539 LLEIATGRRPID-----SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           LLE+A GRRPI+      +  +LVDWV  F     +LD  DPNLGS Y   E+E+VL+LG
Sbjct: 541 LLEVACGRRPIEINNQSGERVVLVDWVFRFWMEANILDAKDPNLGSEYDQKEVEMVLKLG 600

Query: 594 LLCSHQKAEARPTMRQVLRYLNGDELLP 621
           LLCSH    ARPTMRQVL+YL GD +LP
Sbjct: 601 LLCSHSDPLARPTMRQVLQYLRGDAMLP 628

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SZD5|LRK59_ARATH L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana GN=LECRK59 PE=2 SV=1

 Score =  533 bits (1374), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 289/632 (45%), Positives = 391/632 (61%), Gaps = 56/632 (8%)

Query: 19  ALSQQKE-EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQM 77
           ALSQ +E EF FNG+     N G+      +I    G ++LT+++    GH FYN P++ 
Sbjct: 19  ALSQSEEGEFGFNGY--LYDNSGI------AITNSKGLMKLTNSSEFSYGHVFYNSPVR- 69

Query: 78  LDKSTSLSSKPNA--SSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGIL 135
                   + PN   SSFST FVF IV+  +   G GLAF +SP    P   +  YLG+ 
Sbjct: 70  ------FKNSPNGTVSSFSTTFVFAIVSNVNALDGHGLAFVISPTKGLPYSSSSQYLGLF 123

Query: 136 NSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYEN--GTKE 193
           N TN+  PSNH+ A+EFDT     E  D   NHVGI++NS+ S K   A YYE+  GT +
Sbjct: 124 NLTNNGDPSNHIVAVEFDTFQN-QEFDDMDNNHVGIDINSLSSEKASTAGYYEDDDGTFK 182

Query: 194 DFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQE 253
           +  L +  P+QAWI+YD   R +NVTI P+        H  KP  PLLSL  DLSP   +
Sbjct: 183 NIRLINQKPIQAWIEYDSSRRQLNVTIHPI--------HLPKPKIPLLSLTKDLSPYLFD 234

Query: 254 TMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIA 313
           +MYVGF+++TGR  SSH+ILGW+F +NG A ++++S++P LP  R S ++   +I  +  
Sbjct: 235 SMYVGFTSATGRLRSSHYILGWTFKLNGTASNIDISRLPKLP--RDSRSTSVKKILAISL 292

Query: 314 ALSTVAVILLGTLLIFKLYRRIAQFEILEDWELD-CPHRFRYSDLYTATKGFKQSEVIGT 372
           +L+++A+++  T+      +R    E+LEDWE+   PHRF Y DLY ATKGF+ SE++G 
Sbjct: 293 SLTSLAILVFLTISYMLFLKRKKLMEVLEDWEVQFGPHRFAYKDLYIATKGFRNSELLGK 352

Query: 373 GGFGEVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKR 416
           GGFG+VYKG L T                 MREF AEI ++GRLRH +LV L G+C+RK 
Sbjct: 353 GGFGKVYKGTLSTSNMDIAVKKVSHDSRQGMREFVAEIATIGRLRHPNLVRLLGYCRRKG 412

Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L LVYD +P GSLD  L+      L W QRF IIK +A+GL YLH +W QV+IHRD+K 
Sbjct: 413 ELYLVYDCMPKGSLDKFLYHQPEQSLDWSQRFKIIKDVASGLCYLHHQWVQVIIHRDIKP 472

Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
            NVL+D  MN +LGDFGLA+L +HG    T+NV GT GYI+PEL+RTGKAS S+DVFA+G
Sbjct: 473 ANVLLDDSMNGKLGDFGLAKLCEHGFDPQTSNVAGTFGYISPELSRTGKASTSSDVFAFG 532

Query: 537 VLLLEIATGRRPI-----DSDHFILVDWVLEFQHLGQVLDVVDPNL--GSSYVVAEMELV 589
           +L+LEI  GRRP+          +L DWVL+      +L VVD  +     Y+  ++ LV
Sbjct: 533 ILMLEITCGRRPVLPRASSPSEMVLTDWVLDCWE-DDILQVVDERVKQDDKYLEEQVALV 591

Query: 590 LQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           L+LGL CSH  A  RP+M  V+++L+G   LP
Sbjct: 592 LKLGLFCSHPVAAVRPSMSSVIQFLDGVAQLP 623

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana GN=LECRKS4 PE=1 SV=1

 Score =  524 bits (1350), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 290/641 (45%), Positives = 399/641 (62%), Gaps = 60/641 (9%)

Query: 25  EEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSL 84
           ++F F GF +   N   +T    + + P+GA+RLT     VIGHAFY+ PI+        
Sbjct: 24  QDFSFIGFKKASPN---LTLNGVAEIAPTGAIRLTTETQRVIGHAFYSLPIRF------- 73

Query: 85  SSKP----NASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
             KP     A SFST F   +V      GG GLAF ++P P   G     YLG+LNS+  
Sbjct: 74  --KPIGVNRALSFSTSFAIAMVPEFVTLGGHGLAFAITPTPDLRGSLPSQYLGLLNSSRV 131

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYY-ENGTKEDFTLES 199
           +  S+H FA+EFDTV    E  D   NHVGI++NSM+S    PA Y+  N TK++  L+ 
Sbjct: 132 NF-SSHFFAVEFDTVRDL-EFEDINDNHVGIDINSMESSISTPAGYFLANSTKKELFLDG 189

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF 259
           G  +QAWIDYD   + ++V + P ++K KLS         LLS  +DLS    + MYVGF
Sbjct: 190 GRVIQAWIDYDSNKKRLDVKLSPFSEKPKLS---------LLSYDVDLSSVLGDEMYVGF 240

Query: 260 SASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLP--IERSSSNSFSLQIKI-LIAALS 316
           SASTG   SSH+ILGW+F+M+G A SL+L  +P +P  I++      SL + + L+ +L 
Sbjct: 241 SASTGLLASSHYILGWNFNMSGEAFSLSLPSLPRIPSSIKKRKKKRQSLILGVSLLCSLL 300

Query: 317 TVAVILLGTLLIFKLYRRIAQFEILEDWELD-CPHRFRYSDLYTATKGFKQSEVIGTGGF 375
             AV++  +L +    R++   + +E+WELD  PHRF Y +L  AT GF   E++G+GGF
Sbjct: 301 IFAVLVAASLFVV---RKVKDEDRVEEWELDFGPHRFSYRELKKATNGFGDKELLGSGGF 357

Query: 376 GEVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL 419
           G+VYKG LP                  +REF +E+ S+G LRH++LV L GWC+R+ DLL
Sbjct: 358 GKVYKGKLPGSDEFVAVKRISHESRQGVREFMSEVSSIGHLRHRNLVQLLGWCRRRDDLL 417

Query: 420 LVYDYIPNGSLDSLLFD-NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN 478
           LVYD++PNGSLD  LFD N   +L+W+QRF IIKG+A+GLLYLHE WEQ VIHRD+K+ N
Sbjct: 418 LVYDFMPNGSLDMYLFDENPEVILTWKQRFKIIKGVASGLLYLHEGWEQTVIHRDIKAAN 477

Query: 479 VLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVL 538
           VL+D++MN R+GDFGLA+L++HG     T VVGT GY+APEL ++GK + STDV+A+G +
Sbjct: 478 VLLDSEMNGRVGDFGLAKLYEHGSDPGATRVVGTFGYLAPELTKSGKLTTSTDVYAFGAV 537

Query: 539 LLEIATGRRPIDS----DHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           LLE+A GRRPI++    +  ++VDWV      G + DVVD  L   +   E+ +V++LGL
Sbjct: 538 LLEVACGRRPIETSALPEELVMVDWVWSRWQSGDIRDVVDRRLNGEFDEEEVVMVIKLGL 597

Query: 595 LCSHQKAEARPTMRQVLRYLNGD----ELLPIIDNWSSLDS 631
           LCS+   E RPTMRQV+ YL       E++P  D   + DS
Sbjct: 598 LCSNNSPEVRPTMRQVVMYLEKQFPSPEVVPAPDFLDANDS 638

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	670
332083027	668	lectin receptor-like kinase [Gossypium h	0.940	0.943	0.636	0.0
224087800	660	predicted protein [Populus trichocarpa]	0.943	0.957	0.587	0.0
255571419	675	kinase, putative [Ricinus communis] gi|2	0.974	0.967	0.598	0.0
224139244	660	predicted protein [Populus trichocarpa]	0.946	0.960	0.604	0.0
224139246	660	predicted protein [Populus trichocarpa]	0.946	0.960	0.601	0.0
356506567	677	PREDICTED: lectin-domain containing rece	0.941	0.932	0.583	0.0
359481281	1435	PREDICTED: uncharacterized protein LOC10	0.941	0.439	0.615	0.0
356566703	683	PREDICTED: lectin-domain containing rece	0.940	0.922	0.560	0.0
356523344	681	PREDICTED: lectin-domain containing rece	0.934	0.919	0.574	0.0
449440251	667	PREDICTED: probable L-type lectin-domain	0.964	0.968	0.554	0.0

>gi|332083027|gb|AEE00746.1| lectin receptor-like kinase [Gossypium hirsutum]

 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/668 (63%), Positives = 502/668 (75%), Gaps = 38/668 (5%)

Query: 5   VSFALRLF-FFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH 63
           ++F L  F FFPVIA    +   FIF+GFN ++     +T + ASI  PSGAL LT+++ 
Sbjct: 1   MAFLLFWFIFFPVIA--QPRPTNFIFHGFNRSEPK---LTLDGASIRSPSGALELTNDSR 55

Query: 64  NVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSF 123
           + IGHAFY++PIQMLD  +S S K  +SSFST FV  IVTP+SG+GG GLAFT+SP   F
Sbjct: 56  DAIGHAFYSEPIQMLDDKSSPSPK--SSSFSTTFVLAIVTPSSGRGGHGLAFTLSPSKQF 113

Query: 124 PGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEP 183
           PG   EHY+GI NS  D   SNH+ A+EFDTVNGYN+  DS+GNHVGIN+N+M S   EP
Sbjct: 114 PGALPEHYMGIFNSETDGSSSNHIVAVEFDTVNGYNDRLDSKGNHVGININTMYSNATEP 173

Query: 184 AAYYENGT--KEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLL 241
           AAYY N T  KED  LESGD +QAWI+YDG    VNVTICP        FH  KPS+PL+
Sbjct: 174 AAYYVNNTELKEDMILESGDAIQAWIEYDG--NFVNVTICP--------FHLNKPSKPLI 223

Query: 242 SLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSS 301
           S P+DL+P  QETMYVGFSASTG+K SSH+ILGWSFS NG A  LN S+IP  P +++  
Sbjct: 224 SHPIDLTPFVQETMYVGFSASTGQKSSSHYILGWSFSTNGTAAQLNTSRIPMAPSKQNDG 283

Query: 302 NSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTAT 361
           +SF  ++  LI ALSTV V+LLG L+ F LY+R A++E LEDWELDCPHRFR  DLY AT
Sbjct: 284 SSFDTRVIGLIVALSTVTVLLLGILIYFTLYKRNAKYEDLEDWELDCPHRFRCKDLYAAT 343

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTR----------------MREFAAEIESLGRLRHKHL 405
           +GF+ SE+IG GGF  VYKGVLPT                 +REF AEIESLGRLRHK+L
Sbjct: 344 RGFQLSEIIGVGGFAAVYKGVLPTTGTEVAVKKITQSSIQGLREFVAEIESLGRLRHKNL 403

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHEE 464
           V LQGWCKRK DLLLVYDYIPNGSL SLLF+ E  FVLSWE+RFNIIKGIAAGLLYLHEE
Sbjct: 404 VYLQGWCKRKNDLLLVYDYIPNGSLYSLLFNQEQGFVLSWEKRFNIIKGIAAGLLYLHEE 463

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
           WE VVIHRDVKS NVLIDADMNARLGDFGLARL+DHG  SHTTN+VGT+GYIAPELAR G
Sbjct: 464 WELVVIHRDVKSSNVLIDADMNARLGDFGLARLYDHGTDSHTTNIVGTVGYIAPELARNG 523

Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA 584
           KAS S+DVFAYGVLLLEI  GR+P+DS +F LVDWV+E   +G +LD +DP L SSYV  
Sbjct: 524 KASTSSDVFAYGVLLLEIVCGRKPVDSRNFFLVDWVIECHQMGHILDAMDPKLNSSYVTE 583

Query: 585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEII 644
           E++LVL LGLLCSH K E RP+M +++RYLNGDE +P IDNW + DS   E   ++LE +
Sbjct: 584 EVKLVLLLGLLCSHPKPEVRPSMSKIVRYLNGDERIPSIDNWEAFDSS-DETYLKFLETV 642

Query: 645 STDNITTS 652
           S+D+IT S
Sbjct: 643 SSDSITKS 650

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087800|ref|XP_002308233.1| predicted protein [Populus trichocarpa] gi|222854209|gb|EEE91756.1| predicted protein [Populus trichocarpa]

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/671 (58%), Positives = 510/671 (76%), Gaps = 39/671 (5%)

Query: 23  QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKST 82
           Q  EF+FNGFN ++ N   +T ++ SI+KPSG LRLT+   N +GHAFY++ +QML++S+
Sbjct: 6   QDVEFLFNGFNGSEAN---LTLDKVSIIKPSGLLRLTNKTQNAVGHAFYSEKVQMLNRSS 62

Query: 83  SLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHK 142
           S S    ASSFST FVFQI++P+ G+GGFG AFT+SP    PG +A HYLG+ NSTND  
Sbjct: 63  SSSPN--ASSFSTAFVFQIISPSKGEGGFGFAFTLSPSDRLPGAEARHYLGLFNSTNDGS 120

Query: 143 PSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTK----EDFTLE 198
            SN++FA+EFDTVNG+N+++DS GNHVGIN+NS+ S   +PA+Y ++  +    E+  L+
Sbjct: 121 SSNYIFAVEFDTVNGFNKSTDSVGNHVGININSVDSKAGKPASYNDDVNRLDSFEELVLD 180

Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVG 258
           SG P+QAW++Y+GV +  NVTI PM+         GKP QPL+S P DLS   +E MYVG
Sbjct: 181 SGKPIQAWVEYNGVTKCTNVTIAPMDH--------GKPIQPLISFPQDLSTYVREDMYVG 232

Query: 259 FSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTV 318
           FSASTG K SSH+ILGWSFS  G AP LNLS++P + ++  +S+SF   + ++IA+L  V
Sbjct: 233 FSASTGNKASSHYILGWSFSTKGEAPPLNLSRLP-IALQEKNSSSFRPSVIVIIASLCGV 291

Query: 319 AVILLGTLLIFKLYR-RIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGE 377
             +L   L    +Y+ +  Q E LEDWEL+CPHRFRY DLYTATKGFK+SE+IG GGFG 
Sbjct: 292 TTLLFVILFFLTVYKIKWRQSEALEDWELECPHRFRYQDLYTATKGFKKSEIIGVGGFGA 351

Query: 378 VYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV 421
           VYKG LPT                 +REF AEIESLGRLRHK+LVNLQGWCK+  DLLLV
Sbjct: 352 VYKGRLPTNGNEVAVKKINNNSIQGLREFTAEIESLGRLRHKNLVNLQGWCKKNNDLLLV 411

Query: 422 YDYIPNGSLDSLLFDN-ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVL 480
           YD+IPNGSL  LLF    NFVLSWEQRFNI+KG+AAGLLYLHEEWEQVVIHRDVKSGNVL
Sbjct: 412 YDFIPNGSLAGLLFSRINNFVLSWEQRFNIVKGVAAGLLYLHEEWEQVVIHRDVKSGNVL 471

Query: 481 IDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLL 540
           IDA+MN RLGDFGLARL+DHG +SHTTN+VGTIGY+APEL RTG++S S+DV+AYG+LLL
Sbjct: 472 IDAEMNGRLGDFGLARLYDHGTMSHTTNIVGTIGYLAPELTRTGQSSTSSDVYAYGILLL 531

Query: 541 EIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQK 600
           E+A GR+P+++ +FIL+D V+E+  +G+++D  DP L S++VV EMELVL LGLLCSH+K
Sbjct: 532 EVACGRKPVETSNFILIDSVIEYHQMGRIIDAADPKLNSAFVVKEMELVLGLGLLCSHRK 591

Query: 601 AEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEI-ISTDNITTSQLSSSFG 659
            +ARPTMRQV RYLN ++ LP+ID+  S DS R   +++++E+ +S++ IT S  SSS G
Sbjct: 592 PKARPTMRQVTRYLNWEDKLPVIDDLGSPDSLRG--STKFMEVSVSSNTITGSYPSSSIG 649

Query: 660 VISSNSIEAGR 670
            ++S+S++AGR
Sbjct: 650 YMTSSSMDAGR 660

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571419|ref|XP_002526657.1| kinase, putative [Ricinus communis] gi|223533957|gb|EEF35679.1| kinase, putative [Ricinus communis]

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/692 (59%), Positives = 508/692 (73%), Gaps = 39/692 (5%)

Query: 1   MALTVSFALRLFFFPVIAALSQ-QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLT 59
           MA +   ++  F F +   + Q Q EEF FNGFN     + L+  +RAS+ KPSGALRLT
Sbjct: 1   MAASSMNSVVWFIFLLYTIVDQAQSEEFTFNGFN---GKEKLLALDRASVFKPSGALRLT 57

Query: 60  DNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP 119
           +   N IGHAFY+  IQM +K++     PN +SF T FVF IV P SG+GGFG  F +SP
Sbjct: 58  NKTKNAIGHAFYSNTIQMFNKTS-----PNPTSFQTTFVFSIVPPASGEGGFGFGFALSP 112

Query: 120 QPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSI 179
               PG  A HYLG+ N+ N+ + +NH+FA+EFDTV G+NET D+ GNH+GIN+NSM S 
Sbjct: 113 TSQIPGAAAGHYLGLFNNLNNGESTNHIFAVEFDTVKGFNETGDTTGNHIGININSMDSN 172

Query: 180 KLEPAAYYE-NGTKED-FTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPS 237
           + + AAY   N T+ED   L  G P+QAW++YDG  ++V VTICPM +         KP 
Sbjct: 173 ETQAAAYISVNDTREDGLNLHDGKPIQAWVEYDGAKKVVTVTICPMGQP--------KPV 224

Query: 238 QPLLSLP-LDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPI 296
            PL++   L+LS   +E  YVGFSASTG   SSH+ILGWSFS  GAAP+LNL ++P  P 
Sbjct: 225 IPLINFTGLNLSEIVKENTYVGFSASTGENASSHYILGWSFSTTGAAPALNLDELPMPPD 284

Query: 297 ERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSD 356
           E+ SS SFS  +  LI+AL  +AV+L+G LL   LY+ +A FE LEDWEL+CPHRF Y D
Sbjct: 285 EKDSS-SFSRTVVALISALCVMAVLLIGILLCLTLYKSMATFESLEDWELECPHRFGYRD 343

Query: 357 LYTATKGFKQSEVIGTGGFGEVYKGVLP-----------TR-----MREFAAEIESLGRL 400
           LYTATKGFK+SE+IG GGFG VYK V+            TR     ++EF+AEIESLGRL
Sbjct: 344 LYTATKGFKESEIIGVGGFGIVYKAVMRNDGNEVAVKKITRNSVQGLKEFSAEIESLGRL 403

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-NENFVLSWEQRFNIIKGIAAGLL 459
           RHKHLVNLQGWCKR+ DL LVYDYIPNGSLDSLLF    N VLSW+QRFNI+KGIAAGLL
Sbjct: 404 RHKHLVNLQGWCKRENDLFLVYDYIPNGSLDSLLFHPKNNSVLSWDQRFNIVKGIAAGLL 463

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           YLHEEW+QVVIHRDVKS NVLIDA+MN RLGDFGLARL+DHG  SHTT+VVGTIGYIAPE
Sbjct: 464 YLHEEWDQVVIHRDVKSSNVLIDAEMNGRLGDFGLARLYDHGINSHTTSVVGTIGYIAPE 523

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
           LARTGKAS S+DVFAYGVLLLE+ATGRRPI S  FILVDWVLE Q +G++LD VDPNL S
Sbjct: 524 LARTGKASTSSDVFAYGVLLLEVATGRRPIGSGQFILVDWVLECQQVGKILDAVDPNLNS 583

Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQR-SEMNS 638
           +Y   E+ELVL+LGLLC+HQ +++RP+MRQV  YLNGD  LP+I++W S +S   SE+NS
Sbjct: 584 NYTAEEVELVLELGLLCAHQNSDSRPSMRQVTTYLNGDYKLPVIEDWGSYESHHLSEINS 643

Query: 639 RYLEIISTDNITTSQLSSSFGVISSNSIEAGR 670
           R L++ + +  +TS  SSS   +S++SI+AGR
Sbjct: 644 RLLKLSNCEMTSTSYRSSSIRYMSTSSIDAGR 675

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139244|ref|XP_002323017.1| predicted protein [Populus trichocarpa] gi|222867647|gb|EEF04778.1| predicted protein [Populus trichocarpa]

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/673 (60%), Positives = 495/673 (73%), Gaps = 39/673 (5%)

Query: 1   MALTVSFALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTD 60
           MA T+   L   F  +I  +  Q  EFIFNGFNE++ N   +T + ASI+KPSG LRLT+
Sbjct: 1   MASTICLFLLYMFISMI--VEAQSVEFIFNGFNESEKN---LTIDGASIIKPSGLLRLTN 55

Query: 61  NAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQ 120
                +GHAFY+KPIQMLD  TS +S PNASSFST FVFQIV+P  G+GG GLAF ++P 
Sbjct: 56  KTQYAVGHAFYSKPIQMLD--TSSNSSPNASSFSTTFVFQIVSPK-GKGGHGLAFALAPS 112

Query: 121 PSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIK 180
             FPG  AEHYLG+ N +N+   SNH+FA+EFDTVNG+NE SD++GNHVG+N+NSM+S  
Sbjct: 113 NQFPGAAAEHYLGLFNPSNNGDSSNHIFAVEFDTVNGFNENSDTEGNHVGVNINSMRSKS 172

Query: 181 LEPAAYYENGTK---EDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPS 237
              A+Y E+      E+ TLESG+P+QAWI+YDG  +LV+VTI PM K         +P 
Sbjct: 173 SRAASYREDDNPDRYEELTLESGEPIQAWIEYDGAAKLVSVTIGPMEKS--------RPI 224

Query: 238 QPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGA-APSLNLSQIPSLPI 296
           +PL+S P+DLS   ++ MY GFS+STG+K SSH+ILGWSFS   A A  LNLS +P  PI
Sbjct: 225 RPLISFPVDLSAVVKDNMYAGFSSSTGKKTSSHYILGWSFSTEKAGARPLNLSLLPRAPI 284

Query: 297 ERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSD 356
              SS+SF   +  +IA+L  V  IL   LL   +YR   Q E LEDWE+DCPHRFRY D
Sbjct: 285 SEESSSSFQPSVIAIIASLCGVTTILFAILLFHAVYRNWPQSEALEDWEVDCPHRFRYQD 344

Query: 357 LYTATKGFKQSEVIGTGGFGEVYKGVLPTR----------------MREFAAEIESLGRL 400
           L+TATKGFK+SE+IG GGFG VYKG LPT                 +R F AEIESLGRL
Sbjct: 345 LHTATKGFKKSEIIGAGGFGAVYKGRLPTNGNEVAVKRITTNSIQGLRGFTAEIESLGRL 404

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-NENFVLSWEQRFNIIKGIAAGLL 459
           RHK+LVNLQGWCKR  DLLLVYDYIPNGSL  LLF    NFVLSWEQRFNI+KGIAAGLL
Sbjct: 405 RHKNLVNLQGWCKRNNDLLLVYDYIPNGSLAGLLFSRGNNFVLSWEQRFNIVKGIAAGLL 464

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           YLHEEWEQVVIHRDVKS NVLIDA MN RLGDFGLARL+DHG +SHTTN+VGTIGYIAPE
Sbjct: 465 YLHEEWEQVVIHRDVKSSNVLIDAGMNGRLGDFGLARLYDHGTMSHTTNIVGTIGYIAPE 524

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
           LARTG+AS S+DV+AYG+LLLE+A GR+P+++ +FIL D+V+E    G+VLD  DP L S
Sbjct: 525 LARTGQASTSSDVYAYGILLLEVACGRKPVETSNFILTDFVIECHQKGRVLDAADPELNS 584

Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSR 639
           ++VV EME+VL LGLLCSH K +ARPTMR+V+RYLN +E LP+ID+  S DS     ++R
Sbjct: 585 AFVVKEMEVVLGLGLLCSHHKPKARPTMREVIRYLNWEEKLPVIDDLGSSDSPCR--STR 642

Query: 640 YLEIISTDNITTS 652
           Y+  +S + IT+S
Sbjct: 643 YMGEVSIEMITSS 655

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139246|ref|XP_002323018.1| predicted protein [Populus trichocarpa] gi|222867648|gb|EEF04779.1| predicted protein [Populus trichocarpa]

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/673 (60%), Positives = 492/673 (73%), Gaps = 39/673 (5%)

Query: 1   MALTVSFALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTD 60
           MA T+   L   F  +I  +  Q  EFIFNGFNE++ N   +T + ASI+KPSG LRLT+
Sbjct: 1   MASTICLFLLYMFISMI--VEAQSVEFIFNGFNESEKN---LTIDGASIIKPSGLLRLTN 55

Query: 61  NAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQ 120
                +GHAFY+KPIQMLD  TS +S PNASSFST FVFQIV+P  G+GG GLAF ++P 
Sbjct: 56  KTQYAVGHAFYSKPIQMLD--TSSNSSPNASSFSTTFVFQIVSPK-GKGGHGLAFALAPS 112

Query: 121 PSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIK 180
             FPG  AEHYLG+ N +N+   SNH+FA+EFDTVNG+NE SD++GNHVG+N+NSM+S  
Sbjct: 113 NQFPGAAAEHYLGLFNPSNNGDSSNHIFAVEFDTVNGFNENSDTEGNHVGVNINSMRSKS 172

Query: 181 LEPAAYYENGTK---EDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPS 237
              A+Y E+      E+ TLESG+P+QAWI+YDG  +LV+VTI PM K         +P 
Sbjct: 173 SRAASYREDDNPDRYEELTLESGEPIQAWIEYDGAAKLVSVTIGPMEKS--------RPI 224

Query: 238 QPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGA-APSLNLSQIPSLPI 296
           +PL+S P+DLS   ++ MY GFS+STG+K SSH+ILGWSFS   A A  LNLS +P  PI
Sbjct: 225 RPLISFPVDLSAVVKDNMYAGFSSSTGKKTSSHYILGWSFSTEKAGARPLNLSLLPRAPI 284

Query: 297 ERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSD 356
              SS+SF   +  +IA+L  V  IL   L    +YR   Q E LEDWE+DCPHRFRY D
Sbjct: 285 SEESSSSFQPSVIAIIASLCGVTTILFAILFFHAVYRNWPQSEALEDWEVDCPHRFRYQD 344

Query: 357 LYTATKGFKQSEVIGTGGFGEVYKGVLPTR----------------MREFAAEIESLGRL 400
           L+TATKGFK+SE+IG GGFG VYKG LPT                 +R F AEIESLGRL
Sbjct: 345 LHTATKGFKKSEIIGAGGFGAVYKGRLPTNGNEVAVKRITPNSIQGLRGFTAEIESLGRL 404

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN-ENFVLSWEQRFNIIKGIAAGLL 459
           RHK+LVNLQGWCKR  DLLLVYDYIPNG L  LLF    NFVLSWEQRFNI+K IAAGLL
Sbjct: 405 RHKNLVNLQGWCKRNNDLLLVYDYIPNGCLAGLLFSRGNNFVLSWEQRFNIVKDIAAGLL 464

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           YLHEEWEQVVIHRDVKS NVLIDA MN RLGDFGLARL+DHG +SHTTN+VGTIGYIAPE
Sbjct: 465 YLHEEWEQVVIHRDVKSSNVLIDAGMNGRLGDFGLARLYDHGTMSHTTNIVGTIGYIAPE 524

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
           LARTG+AS S+DV+AYG+LLLE+A GR+P+++ +FIL D+V+E    G+VLD  DP L S
Sbjct: 525 LARTGQASTSSDVYAYGILLLEVACGRKPVETSNFILTDFVIECHQKGRVLDAADPELNS 584

Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSR 639
           ++VV EME+VL LGLLCSH K +ARPTMR+V+RYLN +E LP+ID+  S DS     +SR
Sbjct: 585 AFVVKEMEVVLGLGLLCSHHKPKARPTMREVIRYLNWEEKLPVIDDLGSSDSPCR--SSR 642

Query: 640 YLEIISTDNITTS 652
           Y+  +S + IT+S
Sbjct: 643 YMGEVSIEMITSS 655

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506567|ref|XP_003522051.1| PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max]

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/667 (58%), Positives = 483/667 (72%), Gaps = 36/667 (5%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSS 86
           F F+GF+ ++ N   +TRE  S + P G L+LT   +N++GHAFYNKPI++L+K+ S   
Sbjct: 24  FQFHGFHNSERN---LTREGDSNVTPQGILQLTKRENNIVGHAFYNKPIKILEKTNSSVP 80

Query: 87  KPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNH 146
           +   SSFSTCFVF IV+PNSG GGFGLAFT++P   FP  +  H+LG+ N++ND   SNH
Sbjct: 81  QTKFSSFSTCFVFSIVSPNSGLGGFGLAFTIAPTTQFPEAEGGHFLGLFNNSNDMNTSNH 140

Query: 147 LFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENG---TKEDFTLESGDPV 203
           +  +EFDTVNGY + +D+ GNHVG+N+N M+S   EPAAY+E G    KE+F++E  D V
Sbjct: 141 ILVVEFDTVNGYKDNTDTVGNHVGVNINGMQSKIAEPAAYFEEGMDAKKEEFSMEKEDAV 200

Query: 204 QAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPL-DLSPAFQETMYVGFSAS 262
            AWI+YDG   ++NVTI P+    K+S    KPS+PL+S  + D+    +ETM+ GFSAS
Sbjct: 201 CAWIEYDGETEILNVTIAPL----KVS----KPSKPLISQAIHDIKFVMKETMFFGFSAS 252

Query: 263 TG-RKVSSHFILGWSFSMNGA-APSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAV 320
           TG RK SSH+ILGWS S+NG  AP LN S +P  P +   ++SF   +K+ +A LS +  
Sbjct: 253 TGKRKASSHYILGWSVSVNGGIAPPLNFSLLPKPPPKEKDASSFPW-VKVAVAMLSALTF 311

Query: 321 ILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYK 380
            LL  L I   Y+R   FE LEDWELDCPHRFRY DL+ ATKGF +S++IG GGFG VYK
Sbjct: 312 TLLCLLFIVTRYKRYMMFETLEDWELDCPHRFRYRDLHIATKGFIESQLIGVGGFGAVYK 371

Query: 381 GVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY 424
           GVLP+                 MREFAAEIESLGRLRHK+LVNLQGWCK K DL+L+YDY
Sbjct: 372 GVLPSTGTEVAVKRIMRSPMQGMREFAAEIESLGRLRHKNLVNLQGWCKHKNDLILIYDY 431

Query: 425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD 484
           IPNGSLDSLLF N+N  L W+QRFNIIKG+AAGLLYLHEEWEQVVIHRDVKS N+LID +
Sbjct: 432 IPNGSLDSLLF-NDNIALDWDQRFNIIKGVAAGLLYLHEEWEQVVIHRDVKSSNILIDGE 490

Query: 485 MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
            NARLGDFGLARL+ H ++SHTT+VVGTIGYIAPEL RTGKAS S+DV+A+GVLLLE+  
Sbjct: 491 FNARLGDFGLARLYSHDQVSHTTSVVGTIGYIAPELTRTGKASASSDVYAFGVLLLEVVA 550

Query: 545 GRRPI-DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEA 603
           G RP+  S  F+LVDWVLE   LGQ+L+VVDP LGS+Y   EMELVL+LGLLCS  KAE 
Sbjct: 551 GTRPVGSSGQFLLVDWVLENCQLGQILEVVDPKLGSAYDEEEMELVLKLGLLCSQYKAEY 610

Query: 604 RPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEIISTDNITTSQLSSSFGVISS 663
           RP+M+QV RYLN D+ LP I +W   DSQ S  +  +LE +ST  I +S   SS G  S+
Sbjct: 611 RPSMKQVARYLNFDDSLPDISDWRYYDSQSSTNSLSFLEAMSTGKIASSYSLSSIGSRST 670

Query: 664 NSIEAGR 670
             I+ GR
Sbjct: 671 LPIKTGR 677

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481281|ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267833 [Vitis vinifera]

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/681 (61%), Positives = 497/681 (72%), Gaps = 50/681 (7%)

Query: 18   AALSQQKE-EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQ 76
            AA SQ    +F++NGFN T+ N    T + A+I+KPSGAL+LT+ + +VIGHAFY  P  
Sbjct: 777  AAQSQSSSLDFVYNGFNRTEKN---FTLKGATIIKPSGALKLTNRSRDVIGHAFYPDP-- 831

Query: 77   MLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILN 136
                   L+S  N SSFST FVF I+   S  GG+GLAF +SP     G  + H+LGILN
Sbjct: 832  ----INLLNSSNNISSFSTSFVFSIIPSGSDGGGYGLAFLLSPSTDLQGADSGHFLGILN 887

Query: 137  STNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGT--KED 194
            STND   SNH+FA+EFDTVNG+NE   S+GNHVGIN+N M SI  EPA+YY N T  KE+
Sbjct: 888  STNDGDESNHIFAVEFDTVNGHNEGKSSEGNHVGININKMDSIASEPASYYVNDTDKKEE 947

Query: 195  FTLESGDPVQAWIDY-DGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQE 253
              L+SG  +QAWIDY DGV   VNVTI P++  +K       P +PL+S  ++L      
Sbjct: 948  VNLDSGH-IQAWIDYADGV---VNVTIAPLSVPDK-------PMKPLMSKEIELPGVVTN 996

Query: 254  TMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIA 313
            +MYVGFSASTG + SSH+ILGWSF +NG A  LNLS +P  PIE  SS S    IK+LI 
Sbjct: 997  SMYVGFSASTGEERSSHYILGWSFCINGTARPLNLSILPVPPIETDSS-SLHTGIKVLIT 1055

Query: 314  ALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTG 373
             L+ + +++ G  LI  LYRR  + E LEDWELD PHRFRY DLYT+TKGFK SEVIG G
Sbjct: 1056 GLAVI-LLVFGAWLIRLLYRRKMKPEDLEDWELDYPHRFRYKDLYTSTKGFKVSEVIGVG 1114

Query: 374  GFGEVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRD 417
            GF  VYKGVLPT                 MREFAAEIESLGRLRHK+LVNLQGWCK K D
Sbjct: 1115 GFATVYKGVLPTNGNEVAVKKIVQNLTHGMREFAAEIESLGRLRHKNLVNLQGWCKHKND 1174

Query: 418  LLLVYDYIPNGSLDSLLFDN-ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
            LLLVYDYIPNGSLDSLLF   +NFVLSW+QRF I++GIAAGLLYLHEEWE+VVIHRDVK+
Sbjct: 1175 LLLVYDYIPNGSLDSLLFHPPDNFVLSWDQRFKILRGIAAGLLYLHEEWEKVVIHRDVKA 1234

Query: 477  GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
             NVLID+DMN RLGDFGLARL+DHGK SHTT+VVGTIGYIAPEL RTGKAS S+DVFAYG
Sbjct: 1235 SNVLIDSDMNGRLGDFGLARLYDHGKNSHTTSVVGTIGYIAPELTRTGKASTSSDVFAYG 1294

Query: 537  VLLLEIATGRRPI------DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
            VLLLE+A G+RPI       SDHFIL+DWV E    GQ+LD VDP + S YVV E+ELVL
Sbjct: 1295 VLLLEVACGKRPIRPADSQSSDHFILMDWVFECYQAGQILDAVDPRMNSVYVVEEVELVL 1354

Query: 591  QLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQR-SEMNSRYLEIISTDNI 649
            +LGL CSH + EARPTMRQV RYL+ D+ LPI+D+W++ DS R S+++ R+L+I+STD I
Sbjct: 1355 RLGLFCSHPRPEARPTMRQVTRYLSRDDPLPIVDDWAAPDSSRFSDISPRFLQIVSTDTI 1414

Query: 650  TTSQLSSSFGVISSNSIEAGR 670
            T+S  SSS G ISS SI AGR
Sbjct: 1415 TSSCRSSSVGYISSGSIRAGR 1435

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566703|ref|XP_003551569.1| PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max]

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/667 (56%), Positives = 479/667 (71%), Gaps = 37/667 (5%)

Query: 28  IFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKS-TSLSS 86
           IF GF+E       +  + +SI+K S  L+LT+ + N++GHAFY  P QML+K+ T+   
Sbjct: 30  IFEGFDENSE----LNLQGSSIIKTSRLLKLTNRSTNIVGHAFYATPFQMLNKNNTNPPL 85

Query: 87  KPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNH 146
           +P A SFST FVF IV+P SG GGFGLAFT++P   FPG +A HYLG++NS ND   SNH
Sbjct: 86  QPYAYSFSTNFVFSIVSPISGSGGFGLAFTIAPSTQFPGAEAGHYLGLVNSANDGNDSNH 145

Query: 147 LFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGT---KEDFTLESGDPV 203
           +FA+EFDTVNGY + SD++GNHVG+N+N M SI  EPAAY E GT   KEDF +   D V
Sbjct: 146 IFAVEFDTVNGYKDDSDTEGNHVGVNINGMDSIITEPAAYIEEGTDNVKEDFRMAKVDAV 205

Query: 204 QAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPL-LSLPLDLSPAFQETMYVGFSAS 262
           Q WI+YDG  + +NVTI P+           +PS+P+ ++  +DL    +E+MYVGFSAS
Sbjct: 206 QVWIEYDGEKKTLNVTIAPLP--------LPRPSKPIIMNHNIDLYNVMEESMYVGFSAS 257

Query: 263 TGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVIL 322
           TG++ SSH++LGWSF +NG AP LN+S +P  P +     SF   + + I  LS +   L
Sbjct: 258 TGQETSSHYLLGWSFVVNGVAPLLNISNLPKPPPKEKEPTSFPW-VNVAIGILSGLTFCL 316

Query: 323 LGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGV 382
           L  L     YRR   FE+LEDWE+DCPHRFRY DL+ ATKGF +S++IG GGFG VYKGV
Sbjct: 317 LCILFCLTCYRRYMDFEVLEDWEMDCPHRFRYKDLHIATKGFIESQLIGVGGFGAVYKGV 376

Query: 383 LPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP 426
           LP+                 MREFAAEIESLG+LRHK+LVNLQGWCK+K DLLLVYD+IP
Sbjct: 377 LPSTGAEVAVKRIVRSPFHGMREFAAEIESLGKLRHKNLVNLQGWCKKKNDLLLVYDFIP 436

Query: 427 NGSLDSLLFD---NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA 483
           NGSLD +L+    N NFVL+W QRFNI+K I+AGLLYLHEEWEQVVIHRDVK+ N+LIDA
Sbjct: 437 NGSLDYVLYKPNNNNNFVLNWGQRFNILKDISAGLLYLHEEWEQVVIHRDVKTSNILIDA 496

Query: 484 DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIA 543
            +NARLGDFGLARL++HG++SHTT+VVGTIGYIAPEL RTGKA  +TDV+++GV+LLE+A
Sbjct: 497 HLNARLGDFGLARLYNHGQVSHTTSVVGTIGYIAPELTRTGKACANTDVYSFGVVLLEVA 556

Query: 544 TGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEA 603
           TG+RP+DSD F LV+WV+E  HLGQ+L+VVDP L S Y   E+ELVL+LGLLC+  +A+ 
Sbjct: 557 TGKRPLDSDQFFLVEWVIENYHLGQILEVVDPKLDSLYDEEEVELVLKLGLLCTQHRADY 616

Query: 604 RPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEIISTDNITTSQLSSSFGVISS 663
           RP+M+QV RYLN D+ LP I +W    S  S ++  +LE+ S+     +    S   +S+
Sbjct: 617 RPSMKQVTRYLNFDDPLPDIADWGHDVSGSSRLSEGFLEVTSSMGTVEALGYLSSISMST 676

Query: 664 NSIEAGR 670
            SI+AGR
Sbjct: 677 KSIDAGR 683

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523344|ref|XP_003530300.1| PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max]

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/667 (57%), Positives = 486/667 (72%), Gaps = 41/667 (6%)

Query: 28  IFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSK 87
           IF GF++  +   L   E +SI+K S  L+LT+ + N++GHAFY  P QML+ +    ++
Sbjct: 27  IFEGFDDENSELNL---EGSSIIKTSRLLKLTNRSTNIVGHAFYATPFQMLNNT----NQ 79

Query: 88  PNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHL 147
           P A SFST FVF IV+P+SG GGFGLAFT++P   FPG +A HYLG++NSTND   SNH+
Sbjct: 80  PYAYSFSTNFVFSIVSPSSGSGGFGLAFTIAPSTQFPGAEAGHYLGLVNSTNDGNESNHI 139

Query: 148 FAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGT---KEDFTLESGDPVQ 204
           FA+EFDT+NGY + SD++GNHVG+N+N M S   EPAAY + GT   KEDF +   D VQ
Sbjct: 140 FAVEFDTMNGYKDDSDTEGNHVGVNINGMDSNITEPAAYIKEGTDKVKEDFRMAKVDAVQ 199

Query: 205 AWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLL-SLPLDLSPAFQETMYVGFSAST 263
           AWI+YDG N+ +NVTI P++K         +PS+P++ +  +DL    +E+MYVGFSAST
Sbjct: 200 AWIEYDGENKTLNVTIAPLSKP--------RPSKPIIKNHIIDLYNVMEESMYVGFSAST 251

Query: 264 GRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILL 323
           G++ SSH++LGWSF++NG AP L +S +P+ P +     SF   + I I  LS     LL
Sbjct: 252 GQETSSHYLLGWSFAVNGVAPQLKISNLPNPPPKEKEPTSFPW-VNIAIGVLSASTFCLL 310

Query: 324 GTLLIFKLYRRI-AQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGV 382
             L     YRR    FE+LEDWE+DCPHRFRY DL+ ATKGF +S +IG GGFG VYKGV
Sbjct: 311 CILFCITCYRRYYMDFEVLEDWEMDCPHRFRYKDLHLATKGFIESHLIGVGGFGAVYKGV 370

Query: 383 LPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP 426
           LP+                 MREFAAEIESLGRLRHK+LVNLQGWC +K DLLLVYD+IP
Sbjct: 371 LPSTGAEVAVKRIVRSPFHGMREFAAEIESLGRLRHKNLVNLQGWCNKKNDLLLVYDFIP 430

Query: 427 NGSLDSLLF--DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD 484
           NGSLD +L+  +N NFVL+W QRFNI+KGI+AGLLYLHEEWEQVVIHRDVK+ N+LIDA 
Sbjct: 431 NGSLDYVLYKPNNNNFVLNWGQRFNILKGISAGLLYLHEEWEQVVIHRDVKTSNILIDAH 490

Query: 485 MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           +NARLGDFGLARL++HG++SHTT+VVGTIGYIAPEL RTGKAS STDV+A+GV+LLE+AT
Sbjct: 491 LNARLGDFGLARLYNHGQLSHTTSVVGTIGYIAPELTRTGKASTSTDVYAFGVVLLEVAT 550

Query: 545 GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEAR 604
           G+RP+DSD F LV+WV+E  HLGQ+L+VVDP L S Y   E+ELVL+LGLLC+  +A+ R
Sbjct: 551 GKRPLDSDQFFLVEWVIEKYHLGQILEVVDPKLDSLYDEEEIELVLKLGLLCTQHRADYR 610

Query: 605 PTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEII-STDNITTSQLSSSFGVISS 663
           PTM+QV RYLN DE LP I +W    S  S ++S +LE+  S   + T    SS   +S+
Sbjct: 611 PTMKQVTRYLNFDEPLPDIVDWGHGVSGSSRLSSGFLEVTYSMGTVETLGYLSSIS-MST 669

Query: 664 NSIEAGR 670
            SI+AGR
Sbjct: 670 KSIDAGR 676

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440251|ref|XP_004137898.1| PREDICTED: probable L-type lectin-domain containing receptor kinase VI.1-like [Cucumis sativus]

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/691 (55%), Positives = 480/691 (69%), Gaps = 45/691 (6%)

Query: 1   MALTVSFAL-RLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLT 59
           MA+    AL  +F F    AL      FI+ GFN T      + RE AS++KP GALRLT
Sbjct: 1   MAIAAHLALLSVFIFFEAHALPSS---FIYPGFNNTS-----LDREGASVVKPYGALRLT 52

Query: 60  DNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP 119
           + + NVIGHAF+    +M ++S+   S PN  SFST FVF I   + GQGG+GLAF ++P
Sbjct: 53  NISQNVIGHAFHPTSFRMFEQSSD--SSPNVLSFSTTFVFAIEPSSPGQGGYGLAFAIAP 110

Query: 120 QPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSI 179
              F G  + HYLG+ NS+N+  PSNH+FAIEFDTVNG+ E  +++GNHVGI++N + S+
Sbjct: 111 STKFSGAGSGHYLGLFNSSNNGNPSNHIFAIEFDTVNGHGEERNTKGNHVGIDINDISSV 170

Query: 180 KLEPAAY--YENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPS 237
             +PA+Y  Y    + D  ++SGDP+  W++YDG  ++VNVTI P+  K K       P+
Sbjct: 171 TSKPASYSDYGEAHEHDLQMDSGDPIIVWVEYDGPKKIVNVTIAPLKHKRK-------PT 223

Query: 238 QPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIE 297
           + LLS P+DL P  +E M+VGFSASTG K SSH+ILGWSF+MN  AP L+ S +P+ P E
Sbjct: 224 KSLLSYPIDLKPFLKEQMFVGFSASTGDKTSSHYILGWSFAMNEPAPPLDYSLLPNPPKE 283

Query: 298 RSS-SNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSD 356
           +   S+S + + K+ +A +S +A+  LG   +   YR+    E LEDWE DCPHRF Y+D
Sbjct: 284 QDPPSSSPNSRYKVFVAVVSVIAI--LGIFFLAFWYRKTWHTERLEDWERDCPHRFHYTD 341

Query: 357 LYTATKGFKQSEVIGTGGFGEVYKGVLPTR----------------MREFAAEIESLGRL 400
           LYTATKGFK SE+IG GGFG VYKG + +                 M+EFAAEIESLGRL
Sbjct: 342 LYTATKGFKSSELIGIGGFGSVYKGQIRSTGIEIAVKRVRRNSGQGMKEFAAEIESLGRL 401

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-NENFVLSWEQRFNIIKGIAAGLL 459
           RHK+LVNLQGWCK+K DLL+VYDYIPNGSL SLL+    N +L+W+QRFNI+KGIAAGLL
Sbjct: 402 RHKNLVNLQGWCKKKNDLLIVYDYIPNGSLYSLLYHPKNNIILNWKQRFNILKGIAAGLL 461

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           YLHEEWEQVVIHRDVK  NVLIDADMN RL DFGLAR +DH + SHTT VVGTIGYIAPE
Sbjct: 462 YLHEEWEQVVIHRDVKPSNVLIDADMNPRLSDFGLARQYDHDEASHTTGVVGTIGYIAPE 521

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
           L RTGKAS STDVF YGVLLLE+A GR+P+ SD+FILVDWV+E    G++L+  DP L  
Sbjct: 522 LVRTGKASKSTDVFGYGVLLLEVACGRKPLKSDNFILVDWVMEQYEKGKILEAADPKLNW 581

Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSR 639
            Y   EM++VL LGL CSHQ AEARPTMR+V+R L+GD+ +  ++ W    S  S+ NSR
Sbjct: 582 EYEAEEMKMVLVLGLHCSHQIAEARPTMRRVMRILDGDDKIAAVEGWDCSQSY-SKSNSR 640

Query: 640 YLEIISTDNITTSQLSSSFGVISSNSIEAGR 670
             E+IS     TS  SSS G IS  SI+AGR
Sbjct: 641 MTEVIS----ATSYRSSSIGDISETSIDAGR 667

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	670
TAIR|locus:2097613	693	AT3G08870 [Arabidopsis thalian	0.594	0.574	0.486	2.5e-188
TAIR|locus:2149780	682	LECRKA4.1 "lectin receptor kin	0.623	0.612	0.468	7.5e-187
TAIR|locus:2149795	688	LECRKA4.2 "lectin receptor kin	0.434	0.422	0.593	1.1e-172
TAIR|locus:2149810	691	LECRKA4.3 "lectin receptor kin	0.407	0.395	0.625	7e-169
TAIR|locus:2040681	675	RLK "receptor lectin kinase" [	0.904	0.897	0.451	1.3e-137
TAIR|locus:2133229	674	LPK1 "lectin-like protein kina	0.905	0.900	0.443	5.4e-134
TAIR|locus:2084375	677	AT3G53810 [Arabidopsis thalian	0.910	0.901	0.435	3e-133
TAIR|locus:2119936	669	AT4G29050 [Arabidopsis thalian	0.862	0.863	0.436	6.8e-127
TAIR|locus:2097533	659	AT3G59740 [Arabidopsis thalian	0.350	0.356	0.530	8.2e-123
TAIR|locus:2168509	674	AT5G59260 [Arabidopsis thalian	0.831	0.826	0.444	4e-122

TAIR|locus:2097613 AT3G08870 [Arabidopsis thaliana (taxid:3702)]

 Score = 969 (346.2 bits), Expect = 2.5e-188, Sum P(2) = 2.5e-188
 Identities = 210/432 (48%), Positives = 277/432 (64%)

Query:    26 EFIFNGFNETKTNQGLITRERASILK-PSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSL 84
             +F F GF E +T+   I  E AS ++  +  LRLT+   NV G AFY KPI++ + + S 
Sbjct:    35 KFTFIGFKENQTD---IQTEGASTIQHDNDLLRLTNRKQNVTGTAFYRKPIRLRELTNSS 91

Query:    85 SSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPS 144
               K    SFST FVF I+  + G GGFG  FT+SP P+ PG ++  YLG+LN TN+  PS
Sbjct:    92 DIK--VCSFSTSFVFVILPSSPGNGGFGFTFTLSPTPNRPGAESAQYLGLLNRTNNGNPS 149

Query:   145 NHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYEN-GTKEDFTLESGDPV 203
             NH+FA+EFDTV G+ + +D +GNH+G+N N++ S   EP  YY+    KEDF LESG+P+
Sbjct:   150 NHVFAVEFDTVQGFKDGADRRGNHIGLNFNNLSSNVQEPLIYYDTEDRKEDFQLESGEPI 209

Query:   204 QAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSAST 263
             +  IDYDG +  +NVTI P     +L F   K                ++ MYVGF+A+T
Sbjct:   210 RVLIDYDGSSETLNVTIYP----TRLEFKPKKPLISRRVSELSEIV--KDEMYVGFTAAT 263

Query:   264 GRKVSS-HFILGWSFSMNGAAPS---LNLSQIPSLPIERSSSNSFSLQIKILIAALSTVA 319
             G+  SS H+++GWSFS  G  P    L +S++P  P   S+   ++ Q+ +LI ALS V 
Sbjct:   264 GKDQSSAHYVMGWSFSSCGENPMADWLEISRLPPPP-RLSNKKGYNSQVIVLIVALSIVT 322

Query:   320 VILLGTLLIFKLY-RRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEV 378
             ++LL  L IF +Y RRI + + LEDWE+D PHRFRY DLY ATK FK+SE+IGTGGFG V
Sbjct:   323 LVLLVLLFIFVMYKRRIQEEDTLEDWEIDYPHRFRYRDLYLATKKFKESEIIGTGGFGIV 382

Query:   379 YKGVLPTR---------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD 423
             Y+G L +                +REF AEIESLGRL HK+LVNLQGWCK K +LLL+YD
Sbjct:   383 YRGNLSSSGPIAVKKITSNSLQGVREFMAEIESLGRLGHKNLVNLQGWCKHKNELLLIYD 442

Query:   424 YIPNGSLDSLLF 435
             YIPNGSLDSLL+
Sbjct:   443 YIPNGSLDSLLY 454

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2149780 LECRKA4.1 "lectin receptor kinase a4.1" [Arabidopsis thaliana (taxid:3702)]

 Score = 966 (345.1 bits), Expect = 7.5e-187, Sum P(2) = 7.5e-187
 Identities = 214/457 (46%), Positives = 280/457 (61%)

Query:     5 VSFALRLFFFPVIAALSQQKE-EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH 63
             VSF  +LF F  +   +Q+    F F GFN    NQ  I  E A+++KP G LRLTD   
Sbjct:    10 VSFLFKLFLFLSVHVRAQRTTTNFAFRGFNG---NQSKIRIEGAAMIKPDGLLRLTDRKS 66

Query:    64 NVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP-S 122
             NV G AFY+KP+++L+++   S+     SFST FVF I+  +S   GFG  FT+SP P  
Sbjct:    67 NVTGTAFYHKPVRLLNRN---STNVTIRSFSTSFVFVIIPSSSSNKGFGFTFTLSPTPYR 123

Query:   123 FPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGY-NETSDSQGNHVGINVNSMKSIKL 181
                G A+ YLG+ N  N+  P NH+FA+EFDTV G  ++ +D  GN +G+N NS  S   
Sbjct:   124 LNAGSAQ-YLGVFNKENNGDPRNHVFAVEFDTVQGSRDDNTDRIGNDIGLNYNSRTSDLQ 182

Query:   182 EPAAYYEN---GTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXX 238
             EP  YY N     KEDF LESG+P+QA ++YDG  +++NVT+ P     +L F   K   
Sbjct:   183 EPVVYYNNDDHNKKEDFQLESGNPIQALLEYDGATQMLNVTVYPA----RLGFKPTKPLI 238

Query:   239 XXXXXXXXXXXAFQETMYVGFSASTGRKVSS-HFILGWSFSMNGAAPS---LNLSQIPSL 294
                          QE MYVGF+ASTG+  SS H+++GWSFS  G  P    L LS++P  
Sbjct:   239 SQHVPKLLEIV--QEEMYVGFTASTGKGQSSAHYVMGWSFSSGGERPIADVLILSELPPP 296

Query:   295 PIERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYR-RIAQFEILEDWELDCPHRFR 353
             P  ++     + Q+ ++I ALS V +++L  L  F +Y+ R+ Q E LEDWE+D P R R
Sbjct:   297 PPNKAKKEGLNSQVIVMIVALSAVMLVMLVLLFFFVMYKKRLGQEETLEDWEIDHPRRLR 356

Query:   354 YSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTR---------------MREFAAEIESLG 398
             Y DLY AT GFK++ +IGTGGFG V+KG LP                 +REF AEIESLG
Sbjct:   357 YRDLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSSRQGVREFVAEIESLG 416

Query:   399 RLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF 435
             +LRHK+LVNLQGWCK K DLLL+YDYIPNGSLDSLL+
Sbjct:   417 KLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLY 453

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0009845 "seed germination" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0052033 "pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2149795 LECRKA4.2 "lectin receptor kinase a4.1" [Arabidopsis thaliana (taxid:3702)]

 Score = 890 (318.4 bits), Expect = 1.1e-172, Sum P(2) = 1.1e-172
 Identities = 177/298 (59%), Positives = 213/298 (71%)

Query:   380 KGVLPTRM---REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD 436
             K + P  M   REF AEIESLGRLRHK+LVNLQGWCK+K DLLL+YDYIPNGSLDSLL+ 
Sbjct:   391 KKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYS 450

Query:   437 N---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG 493
                    VLSW  RF I KGIA+GLLYLHEEWE+VVIHRD+K  NVLI+ DMN RLGDFG
Sbjct:   451 RPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFG 510

Query:   494 LARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
             LARL++ G  S+TT VVGTIGY+APELAR GK+S ++DVFA+GVLLLEI +GRRP DS  
Sbjct:   511 LARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGT 570

Query:   554 FILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
             F L DWV+E    G++L  VDP LG  Y   E  L L +GLLC HQ+  +RP+MR VLRY
Sbjct:   571 FFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRY 630

Query:   614 LNGDELLPIIDN-WSSLDSQRSEMNSRYLEIISTDNITTSQLXXXXXXXXXXXIEAGR 670
             LNGD+ +P IDN W   DS RS++ S +   +S+D  ++S             + +GR
Sbjct:   631 LNGDDDVPEIDNDWGYSDSSRSDLGSNFEGYVSSDRASSSVPSFSVTRVSSSSVISGR 688

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0009845 "seed germination" evidence=IMP

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2149810 LECRKA4.3 "lectin receptor kinase a4.3" [Arabidopsis thaliana (taxid:3702)]

 Score = 891 (318.7 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
 Identities = 175/280 (62%), Positives = 208/280 (74%)

Query:   380 KGVLPTRM---REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD 436
             K + P  M   REF AEIESLGRLRHK+LVNLQGWCK + DLLL+YDYIPNGSLDSLL+ 
Sbjct:   392 KKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYS 451

Query:   437 N---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG 493
                    VLSW  RF I KGIA+GLLYLHEEWEQ+VIHRDVK  NVLID+DMN RLGDFG
Sbjct:   452 KPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFG 511

Query:   494 LARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
             LARL++ G  S TT VVGTIGY+APELAR G +S ++DVFA+GVLLLEI +GR+P DS  
Sbjct:   512 LARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTDSGT 571

Query:   554 FILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
             F + DWV+E Q  G++L  +DP LGS Y   E  L L +GLLC H K E+RP MR VLRY
Sbjct:   572 FFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRY 631

Query:   614 LNGDELLPII-DNWSSLDSQRSEMNSRYLEIISTDNITTS 652
             LN DE +P I DNW   DS R+++ S+ +  IS+D  ++S
Sbjct:   632 LNRDEDVPEIHDNWGYSDSSRTDLGSKLVGYISSDRASSS 671

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0009845 "seed germination" evidence=IMP

TAIR|locus:2040681 RLK "receptor lectin kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
 Identities = 298/660 (45%), Positives = 403/660 (61%)

Query:     3 LTVSFALRLFFFPVIAALSQQKEEFIFN-GFNE-TKTN-QGLITRERASILKPSGALRLT 59
             LT+ F    FFF +I   S Q   F +N GFN  T  + QG+ T      + P+G L+LT
Sbjct:     6 LTIFF---FFFFNLIFQSSSQSLNFAYNNGFNPPTDLSIQGITT------VTPNGLLKLT 56

Query:    60 DNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP 119
             +      GHAFY KPI+  D     S     SSFST FVF I +  +   G G+AF V+P
Sbjct:    57 NTTVQKTGHAFYTKPIRFKD-----SPNGTVSSFSTSFVFAIHSQIAILSGHGIAFVVAP 111

Query:   120 QPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSI 179
               S P G    Y+G+ N  N+   +NH+FA+E DT+    E +D+  NHVGI++NS+KS+
Sbjct:   112 NASLPYGNPSQYIGLFNLANNGNETNHVFAVELDTILS-TEFNDTNDNHVGIDINSLKSV 170

Query:   180 KLEPAAYY-ENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXX 238
             +  PA Y+ E G  ++ TL S  P+Q W+DYDG    ++VT+ P N+         K   
Sbjct:   171 QSSPAGYWDEKGQFKNLTLISRKPMQVWVDYDGRTNKIDVTMAPFNED--------KPTR 222

Query:   239 XXXXXXXXXXXAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLP-IE 297
                           + MYVGFS++TG  +S H+ILGWSF +N  AP L LS++P LP  E
Sbjct:   223 PLVTAVRDLSSVLLQDMYVGFSSATGSVLSEHYILGWSFGLNEKAPPLALSRLPKLPRFE 282

Query:   298 RSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDL 357
                 + F  +I + + +L  +   +     I +  R+ A+ E+ E  +    +RFR+ DL
Sbjct:   283 PKRISEF-YKIGMPLISLFLIFSFIFLVCYIVRRRRKFAE-ELEEWEKEFGKNRFRFKDL 340

Query:   358 YTATKGFKQSEVIGTGGFGEVYKGVLP-TR---------------MREFAAEIESLGRLR 401
             Y ATKGFK+  ++GTGGFG VYKGV+P T+               M+EF AEI S+GR+ 
Sbjct:   341 YYATKGFKEKGLLGTGGFGSVYKGVMPGTKLEIAVKRVSHESRQGMKEFVAEIVSIGRMS 400

Query:   402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
             H++LV L G+C+R+ +LLLVYDY+PNGSLD  L++     L+W+QR  +I G+A+GL YL
Sbjct:   401 HRNLVPLLGYCRRRGELLLVYDYMPNGSLDKYLYNTPEVTLNWKQRIKVILGVASGLFYL 460

Query:   462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
             HEEWEQVVIHRDVK+ NVL+D ++N RLGDFGLARL+DHG    TT+VVGT+GY+APE  
Sbjct:   461 HEEWEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHT 520

Query:   522 RTGKASCSTDVFAYGVLLLEIATGRRPID-----SDHFILVDWVLEFQHLGQVLDVVDPN 576
             RTG+A+ +TDVFA+G  LLE+A GRRPI+      + F+LVDWV    + G +L   DPN
Sbjct:   521 RTGRATMATDVFAFGAFLLEVACGRRPIEFQQETDETFLLVDWVFGLWNKGDILAAKDPN 580

Query:   577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEM 636
             +GS     E+E+VL+LGLLCSH    ARP+MRQVL YL GD  LP +   S LD   S M
Sbjct:   581 MGSECDEKEVEMVLKLGLLCSHSDPRARPSMRQVLHYLRGDAKLPEL---SPLDLSGSGM 637

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2133229 LPK1 "lectin-like protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1313 (467.3 bits), Expect = 5.4e-134, P = 5.4e-134
 Identities = 297/670 (44%), Positives = 397/670 (59%)

Query:    12 FFFPVIAAL----SQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIG 67
             FFF ++ +     S Q   F +N F+   TN   I+ +  + +  +G L+LTD      G
Sbjct:    10 FFFIILLSKPLNSSSQSLNFTYNSFHRPPTN---ISIQGIATVTSNGILKLTDKTVISTG 66

Query:    68 HAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGK 127
             HAFY +PI+  D     S     SSFST FV  I +      G G+AF ++P P      
Sbjct:    67 HAFYTEPIRFKD-----SPNDTVSSFSTTFVIGIYSGIPTISGHGMAFFIAPNPVLSSAM 121

Query:   128 AEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYY 187
             A  YLG+ +STN+   +NH+ A+EFDT+    E  D+  NHVGIN+NS+ S+K     Y+
Sbjct:   122 ASQYLGLFSSTNNGNDTNHILAVEFDTIMN-PEFDDTNDNHVGININSLTSVKSSLVGYW 180

Query:   188 ENGTK-EDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXX 246
             +   +  + TL S   +Q W+DYD     ++VT+ P  +         K           
Sbjct:   181 DEINQFNNLTLISRKRMQVWVDYDDRTNQIDVTMAPFGEV--------KPRKALVSVVRD 232

Query:   247 XXXAFQETMYVGFSASTGRKVSSHFILGWSFSMNG-AAPSLNLSQIPSLP------IERS 299
                 F + MY+GFSA+TG  +S HF+ GWSF + G  AP L LS++P  P      ++R 
Sbjct:   233 LSSVFLQDMYLGFSAATGYVLSEHFVFGWSFMVKGKTAPPLTLSKVPKFPRVGPTSLQRF 292

Query:   300 SSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQF-EILEDWELDC-PHRFRYSDL 357
               N   L   +LI  L  V++I L   ++    RR  +F E  EDWE +   +R R+ DL
Sbjct:   293 YKNRMPLFSLLLIPVLFVVSLIFLVRFIV----RRRRKFAEEFEDWETEFGKNRLRFKDL 348

Query:   358 YTATKGFKQSEVIGTGGFGEVYKGVLPTR----------------MREFAAEIESLGRLR 401
             Y ATKGFK  +++G+GGFG VY+GV+PT                 ++EF AEI S+GR+ 
Sbjct:   349 YYATKGFKDKDLLGSGGFGRVYRGVMPTTKKEIAVKRVSNESRQGLKEFVAEIVSIGRMS 408

Query:   402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
             H++LV L G+C+R+ +LLLVYDY+PNGSLD  L+D     L W+QRFN+I G+A+GL YL
Sbjct:   409 HRNLVPLLGYCRRRDELLLVYDYMPNGSLDKYLYDCPEVTLDWKQRFNVIIGVASGLFYL 468

Query:   462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
             HEEWEQVVIHRD+K+ NVL+DA+ N RLGDFGLARL DHG    TT VVGT GY+AP+  
Sbjct:   469 HEEWEQVVIHRDIKASNVLLDAEYNGRLGDFGLARLCDHGSDPQTTRVVGTWGYLAPDHV 528

Query:   522 RTGKASCSTDVFAYGVLLLEIATGRRPID----SDHFIL-VDWVLEFQHLGQVLDVVDPN 576
             RTG+A+ +TDVFA+GVLLLE+A GRRPI+    SD  +L VD V  F   G +LD  DPN
Sbjct:   529 RTGRATTATDVFAFGVLLLEVACGRRPIEIEIESDESVLLVDSVFGFWIEGNILDATDPN 588

Query:   577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSE- 635
             LGS Y   E+E VL+LGLLCSH   + RPTMRQVL+YL GD  LP +   S LD + S  
Sbjct:   589 LGSVYDQREVETVLKLGLLCSHSDPQVRPTMRQVLQYLRGDATLPDL---SPLDFRGSGK 645

Query:   636 ---MNSRYLE 642
                MN R+ E
Sbjct:   646 MLGMNHRFSE 655

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2084375 AT3G53810 [Arabidopsis thaliana (taxid:3702)]

 Score = 1306 (464.8 bits), Expect = 3.0e-133, P = 3.0e-133
 Identities = 288/661 (43%), Positives = 404/661 (61%)

Query:     5 VSFALRLFFFPV--IAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA 62
             V   L  FFF +  I   S Q   F +NGF+   T+   I+ +  + + P+G L+LT+ +
Sbjct:     3 VKLKLIFFFFLLCQIMISSSQNLNFTYNGFHPPLTD---ISLQGLATVTPNGLLKLTNTS 59

Query:    63 HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS 122
                 GHAF  + I+  D     S   N SSFST FVF I +      G G+AF V+P   
Sbjct:    60 VQKTGHAFCTERIRFKD-----SQNGNVSSFSTTFVFAIHSQIPTLSGHGIAFVVAPTLG 114

Query:   123 FPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLE 182
              P      Y+G+ N +N+   +NH+FA+EFDT+   +E  D   NHVGI++N ++S    
Sbjct:   115 LPFALPSQYIGLFNISNNGNDTNHIFAVEFDTIQS-SEFGDPNDNHVGIDLNGLRSANYS 173

Query:   183 PAAYYENGTK-EDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXX 241
              A Y ++  K ++ +L S   +Q WIDYD  +  ++VT+ P        F   K      
Sbjct:   174 TAGYRDDHDKFQNLSLISRKRIQVWIDYDNRSHRIDVTVAP--------FDSDKPRKPLV 225

Query:   242 XXXXXXXXAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLP-IERSS 300
                        E MYVGFS++TG  +S HF++GWSF +NG AP L+LS++P LP  E   
Sbjct:   226 SYVRDLSSILLEDMYVGFSSATGSVLSEHFLVGWSFRLNGEAPMLSLSKLPKLPRFEPRR 285

Query:   301 SNSFSLQIKILIAALSTV-AVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYT 359
              + F  +I + + +LS + ++I L   ++ +  +   + +  E  E    +RFR+ +LY 
Sbjct:   286 ISEF-YKIGMPLISLSLIFSIIFLAFYIVRRKKKYEEELDDWET-EFG-KNRFRFKELYH 342

Query:   360 ATKGFKQSEVIGTGGFGEVYKGVLPTR----------------MREFAAEIESLGRLRHK 403
             ATKGFK+ +++G+GGFG VY+G+LPT                 M+EF AEI S+GR+ H+
Sbjct:   343 ATKGFKEKDLLGSGGFGRVYRGILPTTKLEVAVKRVSHDSKQGMKEFVAEIVSIGRMSHR 402

Query:   404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
             +LV L G+C+R+ +LLLVYDY+PNGSLD  L++N    L W+QR  IIKG+A+GL YLHE
Sbjct:   403 NLVPLLGYCRRRGELLLVYDYMPNGSLDKYLYNNPETTLDWKQRSTIIKGVASGLFYLHE 462

Query:   464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
             EWEQVVIHRDVK+ NVL+DAD N RLGDFGLARL+DHG    TT+VVGT+GY+APE +RT
Sbjct:   463 EWEQVVIHRDVKASNVLLDADFNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHSRT 522

Query:   524 GKASCSTDVFAYGVLLLEIATGRRPID-----SDHFILVDWVLEFQHLGQVLDVVDPNLG 578
             G+A+ +TDV+A+G  LLE+ +GRRPI+      D F+LV+WV      G +++  DP LG
Sbjct:   523 GRATTTTDVYAFGAFLLEVVSGRRPIEFHSASDDTFLLVEWVFSLWLRGNIMEAKDPKLG 582

Query:   579 SS-YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLD-SQRSEM 636
             SS Y + E+E+VL+LGLLCSH    ARP+MRQVL+YL GD  LP +   + LD S  S M
Sbjct:   583 SSGYDLEEVEMVLKLGLLCSHSDPRARPSMRQVLQYLRGDMALPEL---TPLDLSAGSVM 639

Query:   637 N 637
             N
Sbjct:   640 N 640

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2119936 AT4G29050 [Arabidopsis thaliana (taxid:3702)]

 Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
 Identities = 275/630 (43%), Positives = 375/630 (59%)

Query:    19 ALSQQKE-EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQM 77
             ALSQ +E EF FNG+     N G+      +I    G ++LT+++    GH FYN P++ 
Sbjct:    19 ALSQSEEGEFGFNGY--LYDNSGI------AITNSKGLMKLTNSSEFSYGHVFYNSPVRF 70

Query:    78 LDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNS 137
              +     S     SSFST FVF IV+  +   G GLAF +SP    P   +  YLG+ N 
Sbjct:    71 KN-----SPNGTVSSFSTTFVFAIVSNVNALDGHGLAFVISPTKGLPYSSSSQYLGLFNL 125

Query:   138 TNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYEN--GTKEDF 195
             TN+  PSNH+ A+EFDT     E  D   NHVGI++NS+ S K   A YYE+  GT ++ 
Sbjct:   126 TNNGDPSNHIVAVEFDTFQN-QEFDDMDNNHVGIDINSLSSEKASTAGYYEDDDGTFKNI 184

Query:   196 TLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETM 255
              L +  P+QAWI+YD   R +NVTI P+        H  K                 ++M
Sbjct:   185 RLINQKPIQAWIEYDSSRRQLNVTIHPI--------HLPKPKIPLLSLTKDLSPYLFDSM 236

Query:   256 YVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIE-RSSSNSFSLQIKILIAA 314
             YVGF+++TGR  SSH+ILGW+F +NG A ++++S++P LP + RS+S    L I + + +
Sbjct:   237 YVGFTSATGRLRSSHYILGWTFKLNGTASNIDISRLPKLPRDSRSTSVKKILAISLSLTS 296

Query:   315 LSTVAVILLGTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGG 374
             L+ +  + +  +L  K  + +   E  E  +   PHRF Y DLY ATKGF+ SE++G GG
Sbjct:   297 LAILVFLTISYMLFLKRKKLMEVLEDWEV-QFG-PHRFAYKDLYIATKGFRNSELLGKGG 354

Query:   375 FGEVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDL 418
             FG+VYKG L T                 MREF AEI ++GRLRH +LV L G+C+RK +L
Sbjct:   355 FGKVYKGTLSTSNMDIAVKKVSHDSRQGMREFVAEIATIGRLRHPNLVRLLGYCRRKGEL 414

Query:   419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN 478
              LVYD +P GSLD  L+      L W QRF IIK +A+GL YLH +W QV+IHRD+K  N
Sbjct:   415 YLVYDCMPKGSLDKFLYHQPEQSLDWSQRFKIIKDVASGLCYLHHQWVQVIIHRDIKPAN 474

Query:   479 VLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVL 538
             VL+D  MN +LGDFGLA+L +HG    T+NV GT GYI+PEL+RTGKAS S+DVFA+G+L
Sbjct:   475 VLLDDSMNGKLGDFGLAKLCEHGFDPQTSNVAGTFGYISPELSRTGKASTSSDVFAFGIL 534

Query:   539 LLEIATGRRPI-----DSDHFILVDWVLEFQHLGQVLDVVDPNL--GSSYVVAEMELVLQ 591
             +LEI  GRRP+          +L DWVL+      +L VVD  +     Y+  ++ LVL+
Sbjct:   535 MLEITCGRRPVLPRASSPSEMVLTDWVLDCWE-DDILQVVDERVKQDDKYLEEQVALVLK 593

Query:   592 LGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
             LGL CSH  A  RP+M  V+++L+G   LP
Sbjct:   594 LGLFCSHPVAAVRPSMSSVIQFLDGVAQLP 623

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2097533 AT3G59740 [Arabidopsis thaliana (taxid:3702)]

 Score = 647 (232.8 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
 Identities = 129/243 (53%), Positives = 169/243 (69%)

Query:   387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF---DNENFV-L 442
             M EF AEI ++GRLRH +LV L G+CK K +L LVYD++PNGSLD  L     NEN   L
Sbjct:   372 MSEFLAEISTIGRLRHPNLVRLLGYCKHKENLYLVYDFMPNGSLDRCLTRSNTNENQERL 431

Query:   443 SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK 502
             +WEQRF IIK +A  LL+LH+EW QV++HRD+K  NVL+D  MNARLGDFGLA+L+D G 
Sbjct:   432 TWEQRFKIIKDVATALLHLHQEWVQVIVHRDIKPANVLLDHGMNARLGDFGLAKLYDQGF 491

Query:   503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID----SDHFILVD 558
                T+ V GT+GYIAPEL RTG+A+ STDV+A+G+++LE+  GRR I+     +  +LVD
Sbjct:   492 DPQTSRVAGTLGYIAPELLRTGRATTSTDVYAFGLVMLEVVCGRRLIERRAAENEAVLVD 551

Query:   559 WVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE 618
             W+LE    G++ D  + ++       E+ELVL+LGLLC+H     RP M  VL+ LNG  
Sbjct:   552 WILELWESGKLFDAAEESIRQEQNRGEIELVLKLGLLCAHHTELIRPNMSAVLQILNGVS 611

Query:   619 LLP 621
              LP
Sbjct:   612 HLP 614

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2168509 AT5G59260 [Arabidopsis thaliana (taxid:3702)]

 Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
 Identities = 265/596 (44%), Positives = 360/596 (60%)

Query:    54 GALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGL 113
             G L LT+N +   GHAFYN PI+    ++SLSS     SFST FVF I        G G+
Sbjct:    51 GPLHLTNNTNTGTGHAFYNIPIKFT--ASSLSS----FSFSTEFVFAIFPLQKSTYGHGM 104

Query:   114 AFTVSPQPSF-PGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGIN 172
             AF VSP       G A   LGI N  ND+K + H+FA+E DT N  +E+ D  GN VGI+
Sbjct:   105 AFVVSPTKDLRSNGSANSNLGIFNRANDNKTATHIFAVELDT-NQNSESFDKGGNDVGID 163

Query:   173 VNSMKSIKLEPAAYYE--NGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLS 230
             +NS+ S++   A+Y+    G      L SG  +  WIDYDG+ +++NVT+ P+      S
Sbjct:   164 INSIVSVESADASYFNARKGKNISLPLASGKSILVWIDYDGIEKVLNVTLAPVQTPKPDS 223

Query:   231 FHFG---KXXXXXXXXXXXXXXAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLN 287
              +F    K               F ETMYVGFS STG   S+ +ILGWSF   G A SL+
Sbjct:   224 PYFSSFIKPKVPLLSRSINLSEIFTETMYVGFSGSTGSIKSNQYILGWSFKQGGKAESLD 283

Query:   288 LSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILLGTLLIFKLYRRIAQFEILEDWELD 347
             +S++ + P    S   F L+ ++L A +ST+A + LG ++     ++ A+     + E  
Sbjct:   284 ISRLSNPP---PSPKRFPLK-EVLGATISTIAFLTLGGIVYLYKKKKYAEVLEQWEKEYS 339

Query:   348 CPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTR---------------MREFAA 392
              P R+ +  LY ATKGF++++++G GGFG+VYKG+LP+                M+++ A
Sbjct:   340 -PQRYSFRILYKATKGFRENQLLGAGGFGKVYKGILPSGTQIAVKRVYHDAEQGMKQYVA 398

Query:   393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV-LSWEQRFNII 451
             EI S+GRLRHK+LV+L G+C+RK +LLLVYDY+PNGSLD  LF       L+W QR NII
Sbjct:   399 EIASMGRLRHKNLVHLLGYCRRKGELLLVYDYMPNGSLDDYLFHKNKLKDLTWSQRVNII 458

Query:   452 KGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG 511
             KG+A+ LLYLHEEWEQVV+HRD+K+ N+L+DAD+N +LGDFGLAR  D G     T VVG
Sbjct:   459 KGVASALLYLHEEWEQVVLHRDIKASNILLDADLNGKLGDFGLARFHDRGVNLEATRVVG 518

Query:   512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD----HFILVDWVLEFQHLG 567
             TIGY+APEL   G  +  TDV+A+G  +LE+  GRRP+D D      ILV WV       
Sbjct:   519 TIGYMAPELTAMGVTTTCTDVYAFGAFILEVVCGRRPVDPDAPREQVILVKWVASCGKRD 578

Query:   568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPII 623
              + D VD  L   + V E +L+L+LG+LCS    E RP+MRQ+L+YL G+  +P I
Sbjct:   579 ALTDTVDSKL-IDFKVEEAKLLLKLGMLCSQINPENRPSMRQILQYLEGNVSVPAI 633

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M020	LRK63_ARATH	2, ., 7, ., 1, 1, ., 1	0.5117	0.9447	0.9200	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.946
3rd Layer	2.7.11	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_VI000363 hypothetical protein (660 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	670
cd06899	236	cd06899, lectin_legume_LecRK_Arcelin_ConA, legume	5e-85
pfam00139	231	pfam00139, Lectin_legB, Legume lectin domain	4e-79
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	8e-47
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-42
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-41
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-40
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-39
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-38
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-37
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-33
cd01951	223	cd01951, lectin_L-type, legume lectins	3e-29
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-28
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	6e-28
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	8e-28
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-27
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-26
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-26
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-25
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-25
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-25
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-25
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-25
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-25
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-24
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-24
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-24
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	9e-24
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	9e-23
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-22
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-22
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-22
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	8e-22
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-21
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	4e-21
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	4e-21
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	4e-21
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	5e-21
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-20
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-20
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-20
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-20
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-19
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	4e-19
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	6e-19
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-19
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	7e-19
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	7e-19
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	7e-19
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	9e-19
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-18
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-18
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-18
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-18
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	3e-18
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	4e-18
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-18
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	7e-18
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	7e-18
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-17
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-17
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-17
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-17
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	6e-17
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-17
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	6e-17
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	7e-17
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	8e-17
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	9e-17
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	9e-17
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	9e-17
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-16
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-16
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-16
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-16
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-16
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-16
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-16
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-16
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-16
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-16
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-16
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-16
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	4e-16
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	5e-16
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	5e-16
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	6e-16
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-16
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-15
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-15
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-15
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-15
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-15
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	2e-15
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-15
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-15
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-15
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	4e-15
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-15
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	5e-15
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	6e-15
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	6e-15
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	7e-15
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	9e-15
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-14
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-14
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-14
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	2e-14
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-14
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	3e-14
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-14
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-14
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-14
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	5e-14
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-14
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-14
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	5e-14
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	6e-14
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	9e-14
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-13
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-13
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-13
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-13
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-13
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-13
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-13
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-13
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-13
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-13
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-13
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-13
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-13
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	4e-13
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	5e-13
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	5e-13
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	6e-13
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	6e-13
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	7e-13
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	7e-13
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	8e-13
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	8e-13
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	8e-13
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-12
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-12
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-12
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-12
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-12
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-12
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-12
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-12
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-12
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-12
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-12
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-12
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-12
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	4e-12
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-12
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	4e-12
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	4e-12
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-12
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-12
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	4e-12
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-12
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-12
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	6e-12
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	8e-12
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	8e-12
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	9e-12
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	9e-12
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-11
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-11
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-11
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-11
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-11
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	3e-11
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	3e-11
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-11
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-11
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-11
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	5e-11
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-11
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-11
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	5e-11
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	5e-11
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	6e-11
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	8e-11
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	9e-11
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	9e-11
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	9e-11
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	9e-11
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	1e-10
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-10
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-10
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-10
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-10
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-10
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-10
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-10
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-10
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-10
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-10
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	2e-10
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-10
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-10
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-10
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	3e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	4e-10
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	4e-10
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-10
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	5e-10
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	5e-10
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	6e-10
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	6e-10
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	7e-10
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	8e-10
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	8e-10
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	9e-10
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	9e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-09
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	1e-09
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-09
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-09
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	4e-09
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	4e-09
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	4e-09
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	4e-09
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-09
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-09
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	5e-09
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	5e-09
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	7e-09
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	8e-09
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-08
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-08
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	1e-08
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-08
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-08
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-08
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	3e-08
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-08
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-08
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-08
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-08
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-08
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	4e-08
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-08
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-08
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	5e-08
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	6e-08
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	6e-08
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	6e-08
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	6e-08
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	7e-08
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	7e-08
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	8e-08
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-07
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-07
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-07
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	1e-07
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-07
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-07
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-07
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	3e-07
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	3e-07
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-07
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	4e-07
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-07
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	5e-07
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	6e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-07
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	7e-07
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	8e-07
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-06
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	1e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-06
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-06
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	3e-06
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-06
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	5e-06
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	6e-06
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	6e-06
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	6e-06
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	1e-05
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-05
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	4e-05
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	5e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	7e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	9e-05
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-04
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	1e-04
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	0.001
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.001
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	0.001
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.002
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.002

>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

 Score =  266 bits (682), Expect = 5e-85
 Identities = 107/258 (41%), Positives = 151/258 (58%), Gaps = 25/258 (9%)

Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV--IGHAFYNKPIQMLDKSTS 83
            F FNGF+  ++N   +T +  + +  +GAL+LT++      +G A Y+KP+++ D +T 
Sbjct: 2   SFNFNGFSSDQSN---LTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTG 58

Query: 84  LSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKP 143
                  +SFST F F I  PN   GG GLAF ++P  S P   +  YLG+ NS+N+   
Sbjct: 59  -----KVASFSTSFSFSITPPNPSLGGDGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNS 113

Query: 144 SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPV 203
           SNH+ A+EFDT     E  D   NHVGI+VNS+ S+K   A Y+++   +   L+SG P+
Sbjct: 114 SNHIVAVEFDTFQN-PEFGDPDDNHVGIDVNSLVSVK---AGYWDD---DGGKLKSGKPM 166

Query: 204 QAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAST 263
           QAWIDYD  ++ ++VT+              KP +PLLS P+DLS    E +YVGFSAST
Sbjct: 167 QAWIDYDSSSKRLSVTLAYSGVA--------KPKKPLLSYPVDLSKVLPEEVYVGFSAST 218

Query: 264 GRKVSSHFILGWSFSMNG 281
           G     H+IL WSFS NG
Sbjct: 219 GLLTELHYILSWSFSSNG 236

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236

>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain

 Score =  251 bits (642), Expect = 4e-79
 Identities = 107/254 (42%), Positives = 146/254 (57%), Gaps = 27/254 (10%)

Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLS 85
            F +NGF+       L  +  A++L P+G L+LT+  +N  G A Y+KPI++ D ST   
Sbjct: 4   SFNYNGFS---NVSNLTLQGDATVL-PNGLLQLTNVTNNSAGRALYSKPIRLWDSSTG-- 57

Query: 86  SKPNASSFSTCFVFQIV-TPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPS 144
                +SFST FVF I   P S  GG GLAF ++P  + PG  +  YLG+ NS+N+   S
Sbjct: 58  ---KVASFSTSFVFAIKNIPKSTNGGDGLAFFLAPSGTQPGASSGGYLGLFNSSNNGNSS 114

Query: 145 NHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQ 204
           NH+ A+EFDT     E +D   NHVGI+VNS+ S+  E A      +     L SG P+Q
Sbjct: 115 NHIVAVEFDTFLN-PEFNDIDDNHVGIDVNSIISVASESA------SFVPLDLNSGKPIQ 167

Query: 205 AWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTG 264
            WIDYDG ++ ++VT+           +  KP +PLLS  +DLS    E +YVGFSASTG
Sbjct: 168 VWIDYDGSSKRLSVTL----------AYPNKPKRPLLSASVDLSTVLPEWVYVGFSASTG 217

Query: 265 RKVSSHFILGWSFS 278
               SH++L WSFS
Sbjct: 218 GATESHYVLSWSFS 231

Length = 231

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  165 bits (421), Expect = 8e-47
 Identities = 73/267 (27%), Positives = 111/267 (41%), Gaps = 31/267 (11%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA------------------AEIESLGRLRHKHL 405
           ++    +G+G FG VYK       +  A                   EI  L RL H ++
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V L    + K  L LV +Y   G L   L       LS ++   I   I  GL YLH   
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHSNG 118

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              +IHRD+K  N+L+D +   ++ DFGLA+       S  T  VGT  Y+APE+   G 
Sbjct: 119 ---IIHRDLKPENILLDENGVVKIADFGLAKKL-LKSSSSLTTFVGTPWYMAPEVLLGGN 174

Query: 526 -ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA 584
                 DV++ GV+L E+ TG+ P   ++ +    ++      ++L             +
Sbjct: 175 GYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIR-----RILG-PPLEFDEPKWSS 228

Query: 585 EMELVLQLGLLCSHQKAEARPTMRQVL 611
             E    L   C ++    RPT  ++L
Sbjct: 229 GSEEAKDLIKKCLNKDPSKRPTAEEIL 255

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  154 bits (392), Expect = 1e-42
 Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 24/207 (11%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-----------------EIESLGRLRHKHLV 406
           ++  E +G G FG+VY        +  A                  EI+ L +L+H ++V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L    + +  L LV +Y   G L  LL           +    ++ I + L YLH +  
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARF--YLRQILSALEYLHSKG- 117

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
             ++HRD+K  N+L+D D + +L DFGLAR  D G     T  VGT  Y+APE+      
Sbjct: 118 --IVHRDLKPENILLDEDGHVKLADFGLARQLDPG--EKLTTFVGTPEYMAPEVLLGKGY 173

Query: 527 SCSTDVFAYGVLLLEIATGRRPIDSDH 553
             + D+++ GV+L E+ TG+ P   D 
Sbjct: 174 GKAVDIWSLGVILYELLTGKPPFPGDD 200

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  149 bits (378), Expect = 9e-41
 Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 43/272 (15%)

Query: 368 EVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHKHLV 406
           + +G G FGEVYKG L                       ++ EF  E   + +L H ++V
Sbjct: 5   KKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIV 64

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G C  +  L++V +Y+P G L   L  N    LS     +    IA G+ YL     
Sbjct: 65  KLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---S 121

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
           +  IHRD+ + N L+  ++  ++ DFGL+R                I ++APE  + GK 
Sbjct: 122 KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKF 181

Query: 527 SCSTDVFAYGVLLLEIAT-GRRP---IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
           +  +DV+++GVLL EI T G  P   + +    +++++ +   L +      P      +
Sbjct: 182 TSKSDVWSFGVLLWEIFTLGEEPYPGMSNAE--VLEYLKKGYRLPK------PPNCPPEL 233

Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
              M       L C  +  E RPT  +++  L
Sbjct: 234 YKLM-------LQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  146 bits (372), Expect = 2e-40
 Identities = 68/192 (35%), Positives = 98/192 (51%), Gaps = 24/192 (12%)

Query: 370 IGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGRLRHKHLVNLQGWC 412
           +G GGFG VY                      + + E   EIE L +L H ++V L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHR 472
           + +  L LV +Y   GSL  LL +NE   LS ++   I+  I  GL YLH      +IHR
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEG-KLSEDEILRILLQILEGLEYLH---SNGIIHR 116

Query: 473 DVKSGNVLIDAD-MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR-TGKASCST 530
           D+K  N+L+D+D    +L DFGL++L    K S    +VGT  Y+APE+    G  S  +
Sbjct: 117 DLKPENILLDSDNGKVKLADFGLSKLLTSDK-SLLKTIVGTPAYMAPEVLLGKGYYSEKS 175

Query: 531 DVFAYGVLLLEI 542
           D+++ GV+L E+
Sbjct: 176 DIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  144 bits (365), Expect = 5e-39
 Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 44/273 (16%)

Query: 367 SEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHKHL 405
            + +G G FGEVYKG L                       ++ EF  E   + +L H ++
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V L G C  +  L +V +Y+  G L S L  N    LS     +    IA G+ YL    
Sbjct: 64  VKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRP-KLSLSDLLSFALQIARGMEYLE--- 119

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
            +  IHRD+ + N L+  ++  ++ DFGL+R                I ++APE  + GK
Sbjct: 120 SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGK 179

Query: 526 ASCSTDVFAYGVLLLEIAT-GRRP---IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY 581
            +  +DV+++GVLL EI T G +P   + ++   +++++     L Q      P      
Sbjct: 180 FTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEE--VLEYLKNGYRLPQ------PPNCPPE 231

Query: 582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           +   M       L C  +  E RPT  +++  L
Sbjct: 232 LYDLM-------LQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  143 bits (362), Expect = 2e-38
 Identities = 79/277 (28%), Positives = 121/277 (43%), Gaps = 46/277 (16%)

Query: 368 EVIGTGGFGEVYKGVLPTR--------------------MREFAAEIESLGRLRHKHLVN 407
           + +G G FGEVYKG L  +                     ++F  E   + +L H ++V 
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLL-------FDNENFVLSWEQRFNIIKGIAAGLLY 460
           L G C  +  L LV +Y+  G L   L          E   LS +   +    IA G+ Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPE 519
           L     +  +HRD+ + N L+  D+  ++ DFGL+R ++D       T     I ++APE
Sbjct: 121 LA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPE 177

Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
             + G  +  +DV+++GVLL EI T G  P      +  + VLE+   G  L    P   
Sbjct: 178 SLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG---LSNEEVLEYLRKGYRLP--KP--- 229

Query: 579 SSYVVAEM-ELVLQLGLLCSHQKAEARPTMRQVLRYL 614
             Y   E+ EL+L     C     E RPT  +++  L
Sbjct: 230 -EYCPDELYELMLS----CWQLDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  139 bits (352), Expect = 4e-37
 Identities = 71/285 (24%), Positives = 114/285 (40%), Gaps = 61/285 (21%)

Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
            +  + +G G FGEVYKG L                          EF  E   + +L H
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V L G C +   L +V +Y+P G L   L  +    L+ +    +   IA G+ YL 
Sbjct: 61  PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGE-KLTLKDLLQMALQIAKGMEYLE 119

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI-----A 517
               +  +HRD+ + N L+  ++  ++ DFGL+R                 G +     A
Sbjct: 120 ---SKNFVHRDLAARNCLVTENLVVKISDFGLSRD----IYEDDYYRKRGGGKLPIKWMA 172

Query: 518 PELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVD-- 574
           PE  + GK +  +DV+++GVLL EI T G +P             E     +VL++++  
Sbjct: 173 PESLKDGKFTSKSDVWSFGVLLWEIFTLGEQP-------YPGMSNE-----EVLELLEDG 220

Query: 575 -----PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
                P      +   M       L C     E RPT  +++  L
Sbjct: 221 YRLPRPENCPDELYELM-------LQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  128 bits (324), Expect = 2e-33
 Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 40/213 (18%)

Query: 364 FKQSEVIGTGGFGEVYKG------------------VLPTRMREFAAEIESLGRLRHKHL 405
           + + E++G G FG VY                         +     EI  L  L+H ++
Sbjct: 2   WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNI 61

Query: 406 VNLQGWCKRKRD---LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN--IIKG----IAA 456
           V   G  +R  +   L +  +Y+  GSL SLL   + F      +    +I+     I  
Sbjct: 62  VRYYG-SERDEEKNTLNIFLEYVSGGSLSSLL---KKF-----GKLPEPVIRKYTRQILE 112

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGY 515
           GL YLH      ++HRD+K  N+L+D+D   +L DFG A+     +    T  V GT  +
Sbjct: 113 GLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYW 169

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           +APE+ R  +   + D+++ G  ++E+ATG+ P
Sbjct: 170 MAPEVIRGEEYGRAADIWSLGCTVIEMATGKPP 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins

 Score =  115 bits (290), Expect = 3e-29
 Identities = 65/256 (25%), Positives = 92/256 (35%), Gaps = 41/256 (16%)

Query: 28  IFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSK 87
           +                  A++   SG LRLT +  N  G A+Y  PI +          
Sbjct: 3   LNFSNFSNNNQSNWQLNGSATLTTDSGVLRLTPDTGNQAGSAWYKTPIDLSK-------- 54

Query: 88  PNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEH-----YLGILNSTNDHK 142
                F+T F F + T  +  G  G+AF +   P+   G         Y GI NS     
Sbjct: 55  ----DFTTTFKFYLGTKGTN-GADGIAFVLQNDPAGALGGGGGGGGLGYGGIGNS----- 104

Query: 143 PSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDP 202
                 A+EFDT     + +D  GNH+ I+VN   +      A              G+ 
Sbjct: 105 -----VAVEFDTYKND-DNNDPNGNHISIDVNGNGN--NTALATSLGSASLPNGTGLGNE 156

Query: 203 VQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAS 262
               I YD     + V          L       S   +++P+DL        Y GF+AS
Sbjct: 157 HTVRITYDPTTNTLTVY---------LDNGSTLTS-LDITIPVDLIQLGPTKAYFGFTAS 206

Query: 263 TGRKVSSHFILGWSFS 278
           TG   + H IL WSF+
Sbjct: 207 TGGLTNLHDILNWSFT 222

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 223

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  114 bits (287), Expect = 2e-28
 Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 21/197 (10%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMR---------------EFAAEIESLGRLRHKHLVNL 408
           F     +G+G FGEV++G+   R+R               +F  E+++L RLRHKHL++L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
              C     + ++ + +  GSL + L   E  VL      ++   +A G+ YL    EQ 
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQN 124

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHTTNVVGTIGYIAPELARTGKAS 527
            IHRD+ + N+L+  D+  ++ DFGLARL  +   +S    +     + APE A  G  S
Sbjct: 125 SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI--PYKWTAPEAASHGTFS 182

Query: 528 CSTDVFAYGVLLLEIAT 544
             +DV+++G+LL E+ T
Sbjct: 183 TKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  113 bits (284), Expect = 6e-28
 Identities = 73/275 (26%), Positives = 134/275 (48%), Gaps = 50/275 (18%)

Query: 368 EVIGTGGFGEVYKGVLPTRMR--------------------EFAAEIESLGRLRHKHLVN 407
           +VIG G FGEV +G L    +                    +F  E   +G+  H +++ 
Sbjct: 10  KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L+G   + R ++++ +Y+ NGSLD  L +N+    +  Q   +++GIA+G+ YL    E 
Sbjct: 70  LEGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLS---EM 125

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG---TIGYIAPELARTG 524
             +HRD+ + N+L+++++  ++ DFGL+R  +  + ++TT   G    I + APE     
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTK--GGKIPIRWTAPEAIAYR 183

Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY-V 582
           K + ++DV+++G+++ E+ + G RP          W +  Q    V+  V+      Y +
Sbjct: 184 KFTSASDVWSFGIVMWEVMSYGERPY---------WDMSNQ---DVIKAVE----DGYRL 227

Query: 583 VAEM---ELVLQLGLLCSHQKAEARPTMRQVLRYL 614
              M     + QL L C  +    RPT  Q++  L
Sbjct: 228 PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTL 262

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  112 bits (282), Expect = 8e-28
 Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 34/207 (16%)

Query: 364 FKQSEVIGTGGFGEVYKG------------VLP----TRMREFAAEIESLGRLRHKHLVN 407
           F+  E IG GGFGEVYK             V+      +  +   EI+ L + +H ++V 
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLLYL 461
             G   +K +L +V ++   GSL  LL        S  Q         + K +  GL YL
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKDLL-------KSTNQTLTESQIAYVCKELLKGLEYL 114

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H      +IHRD+K+ N+L+ +D   +L DFGL+      K  +T   VGT  ++APE+ 
Sbjct: 115 HS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTM--VGTPYWMAPEVI 169

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
                    D+++ G+  +E+A G+ P
Sbjct: 170 NGKPYDYKADIWSLGITAIELAEGKPP 196

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  110 bits (278), Expect = 3e-27
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 34/208 (16%)

Query: 364 FKQSEVIGTGGFGEVYKGV------------------LPTRMREFAAEIESLGRLRHKHL 405
           ++  ++IG G FG VYKG+                      ++    EI+ L  L+H ++
Sbjct: 2   YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI 61

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLL--FD--NENFVLSWEQRFNIIKGIAAGLLYL 461
           V   G  +    L ++ +Y  NGSL  ++  F    E+ V  +      +  +  GL YL
Sbjct: 62  VKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVY------VYQVLQGLAYL 115

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVGTIGYIAPEL 520
           HE   Q VIHRD+K+ N+L   D   +L DFG+A +L D  K   +  VVGT  ++APE+
Sbjct: 116 HE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS--VVGTPYWMAPEV 170

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRP 548
                AS ++D+++ G  ++E+ TG  P
Sbjct: 171 IEMSGASTASDIWSLGCTVIELLTGNPP 198

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  110 bits (276), Expect = 3e-26
 Identities = 76/304 (25%), Positives = 118/304 (38%), Gaps = 30/304 (9%)

Query: 363 GFKQSEVIGTGGFGEVYKGVL----------------PTRMREFAAEIESLGRLRH-KHL 405
            ++    +G G FGEVY                       +  F  EI+ L  L H  ++
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF-VLSWEQRFNIIKGIAAGLLYLHEE 464
           V L  + + +  L LV +Y+  GSL+ LL        LS  +   I+  I + L YLH  
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS- 119

Query: 465 WEQVVIHRDVKSGNVLIDADMN-ARLGDFGLARLFDHGKISHTTN-----VVGTIGYIAP 518
             + +IHRD+K  N+L+D D    +L DFGLA+L      + +        VGT GY+AP
Sbjct: 120 --KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177

Query: 519 ELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP 575
           E+        AS S+D+++ G+ L E+ TG  P + +             L      +  
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237

Query: 576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSE 635
            L  S      +    L      +  + R +    L +     L     + S L      
Sbjct: 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDS 297

Query: 636 MNSR 639
              R
Sbjct: 298 APLR 301

Length = 384

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  106 bits (268), Expect = 7e-26
 Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 40/218 (18%)

Query: 364 FKQSEVIGTGGFGEVY-------------KGVLPTRM----REFA-AEIESLGRLRHKHL 405
           ++  + IG G FG+VY             K +  + M    RE A  E++ L +L H ++
Sbjct: 2   YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNI 61

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLL---------FDNENFVLSW-EQRFNIIKGIA 455
           +      + K  L +V +Y   G L   +         F  E  +L W  Q       + 
Sbjct: 62  IKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFP-EEQILDWFVQ-------LC 113

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
             L YLH    + ++HRD+K  N+ + ++   +LGDFG++++     +     VVGT  Y
Sbjct: 114 LALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS-TVDLAKTVVGTPYY 169

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           ++PEL +    +  +D+++ G +L E+ T + P + ++
Sbjct: 170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score =  105 bits (264), Expect = 2e-25
 Identities = 63/209 (30%), Positives = 115/209 (55%), Gaps = 29/209 (13%)

Query: 365 KQSEVIGTGGFGEVYKGVL--PTRM------------------REFAAEIESLGRLRHKH 404
           K  EVIG G FGEV +G L  P +                   R+F +E   +G+  H +
Sbjct: 7   KIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 66

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +++L+G   + R ++++ +++ NG+LDS L  N+    +  Q   +++GIAAG+ YL   
Sbjct: 67  IIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLS-- 123

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVG---TIGYIAPEL 520
            E   +HRD+ + N+L+++++  ++ DFGL+R  +      T T+ +G    I + APE 
Sbjct: 124 -EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA 182

Query: 521 ARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
               K + ++DV++YG+++ E+ + G RP
Sbjct: 183 IAYRKFTSASDVWSYGIVMWEVMSYGERP 211

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  104 bits (262), Expect = 3e-25
 Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 34/267 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAA-EIESLGRLRHKHL 405
           F+    IG G FG V+K V                 +  R RE A  E   L +L   ++
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +        K  L +V +Y  NG L  LL       L  +Q +     I  GL +LH   
Sbjct: 62  IRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS-- 119

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
            + ++HRD+KS N+ +DA  N ++GD G+A+L         T +VGT  Y++PEL     
Sbjct: 120 -KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT-IVGTPYYLSPELCEDKP 177

Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
            +  +DV+A GV+L E  TG+ P D+++        +   + +++  V P +   Y    
Sbjct: 178 YNEKSDVWALGVVLYECCTGKHPFDANN--------QGALILKIIRGVFPPVSQMYSQQL 229

Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLR 612
            +L+ Q    C  +    RP   Q+LR
Sbjct: 230 AQLIDQ----CLTKDYRQRPDTFQLLR 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  105 bits (264), Expect = 3e-25
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 41/215 (19%)

Query: 365 KQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHK 403
           K  + +G G FG+V                               +F  EIE L  L H+
Sbjct: 7   KFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHE 66

Query: 404 HLVNLQGWC--KRKRDLLLVYDYIPNGSLDSLL------FDNENFVLSWEQRFNIIKGIA 455
           ++V  +G C     R L L+ +Y+P+GSL   L       + +  +L   Q       I 
Sbjct: 67  NIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQ-------IC 119

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--I 513
            G+ YL     Q  IHRD+ + N+L++++   ++ DFGLA++    K  +     G   I
Sbjct: 120 KGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPI 176

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
            + APE  RT K S ++DV+++GV L E+ T   P
Sbjct: 177 FWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDP 211

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  105 bits (263), Expect = 4e-25
 Identities = 75/255 (29%), Positives = 111/255 (43%), Gaps = 36/255 (14%)

Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH  LV L   C  +
Sbjct: 14  LGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE 73

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L   E   L   Q  ++   IA G+ YL     +  IHRD+ 
Sbjct: 74  EPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLA 130

Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELARTGKASCSTDV 532
           + N+L+  ++  ++ DFGLARL    +    T   G    I + APE A  G+ +  +DV
Sbjct: 131 ARNILVGENLVCKIADFGLARLI---EDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDV 187

Query: 533 FAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQ 591
           +++G+LL EI T GR P                   +VL+ V+            E +  
Sbjct: 188 WSFGILLTEIVTYGRVPYPG------------MTNREVLEQVERGYRMPRPPNCPEELYD 235

Query: 592 LGLLCSHQKAEARPT 606
           L L C  +  E RPT
Sbjct: 236 LMLQCWDKDPEERPT 250

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  104 bits (262), Expect = 4e-25
 Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 18/194 (9%)

Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV++G+             P  M  ++F AE + + +LRH  L+ L   C  +
Sbjct: 14  LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE 73

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V + +  GSL   L       L   Q  ++   +A+G+ YL     Q  IHRD+ 
Sbjct: 74  EPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLA 130

Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + NVL+  +   ++ DFGLAR+               I + APE A   + S  +DV+++
Sbjct: 131 ARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSF 190

Query: 536 GVLLLEIAT-GRRP 548
           G+LL EI T GR P
Sbjct: 191 GILLTEIVTYGRMP 204

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  104 bits (261), Expect = 6e-25
 Identities = 66/223 (29%), Positives = 93/223 (41%), Gaps = 28/223 (12%)

Query: 363 GFKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHK 403
            F+   VIG G FG+V                    K V    +R    E   L  L H 
Sbjct: 1   HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ-RFNIIKGIAAGLLYLH 462
            LVNL    + + ++ LV D +  G L   L     F  S EQ +F  I  I   L YLH
Sbjct: 61  FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKF--SEEQVKF-WICEIVLALEYLH 117

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
               + +IHRD+K  N+L+D   +  + DF +A       +  TT+  GT GY+APE+  
Sbjct: 118 S---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL--TTSTSGTPGYMAPEVLC 172

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQH 565
               S + D ++ GV   E   G+RP       + D +   Q 
Sbjct: 173 RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE 215

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  102 bits (257), Expect = 1e-24
 Identities = 63/200 (31%), Positives = 94/200 (47%), Gaps = 29/200 (14%)

Query: 367 SEVIGTGGFGEVYKGVL-------------PTRMREFAAEIESLGRLRHKHLVNLQGWCK 413
              IG G FG+V  G                T  + F AE   +  LRH +LV L G   
Sbjct: 11  GATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVL 70

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
           +   L +V +Y+  GSL   L      V++  Q+      +  G+ YL    E+  +HRD
Sbjct: 71  QGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRD 127

Query: 474 VKSGNVLIDADMNARLGDFGLARL----FDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           + + NVL+  D+ A++ DFGLA+      D GK+         + + APE  R  K S  
Sbjct: 128 LAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP--------VKWTAPEALREKKFSTK 179

Query: 530 TDVFAYGVLLLEI-ATGRRP 548
           +DV+++G+LL EI + GR P
Sbjct: 180 SDVWSFGILLWEIYSFGRVP 199

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score =  103 bits (257), Expect = 2e-24
 Identities = 57/206 (27%), Positives = 112/206 (54%), Gaps = 27/206 (13%)

Query: 366 QSEVIGTGGFGEVYKGVLPTRMR--------------------EFAAEIESLGRLRHKHL 405
           + +VIG G FGEV++G+L    R                    +F +E   +G+  H ++
Sbjct: 9   KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNI 68

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           + L+G   + +  +++ +Y+ NG+LD  L D++    S+ Q   +++GIAAG+ YL    
Sbjct: 69  IRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSY-QLVGMLRGIAAGMKYLS--- 124

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELART 523
           +   +HRD+ + N+L+++++  ++ DFGL+R+ +       T   G I   + APE    
Sbjct: 125 DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY 184

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRP 548
            K + ++DV+++G+++ E+ + G RP
Sbjct: 185 RKFTSASDVWSFGIVMWEVMSFGERP 210

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  103 bits (258), Expect = 2e-24
 Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 38/265 (14%)

Query: 369 VIGTGGFGEVYKGVL-----------------PTRMREFAAEIESLGRLRHKHLVNLQGW 411
           V+G G  G VYK                        ++   E+++L      ++V   G 
Sbjct: 8   VLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGA 67

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA----GLLYLHEEWEQ 467
             ++ ++ +V +Y+  GSL  LL          E    ++  IA     GL YLH +   
Sbjct: 68  FYKEGEISIVLEYMDGGSLADLLKKVGKIP---EP---VLAYIARQILKGLDYLHTKRHI 121

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
             IHRD+K  N+LI++    ++ DFG++++ ++      T  VGT+ Y++PE  +    S
Sbjct: 122 --IHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTF-VGTVTYMSPERIQGESYS 178

Query: 528 CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME 587
            + D+++ G+ LLE A G+ P          +   F+ +  + D   P+L +     E  
Sbjct: 179 YAADIWSLGLTLLECALGKFPFLPPG--QPSF---FELMQAICDGPPPSLPAEEFSPEFR 233

Query: 588 LVLQLGLLCSHQKAEARPTMRQVLR 612
             +     C  +  + RP+  ++L+
Sbjct: 234 DFIS---ACLQKDPKKRPSAAELLQ 255

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  100 bits (252), Expect = 9e-24
 Identities = 63/205 (30%), Positives = 93/205 (45%), Gaps = 31/205 (15%)

Query: 370 IGTGGFGEVY------------------KGVLPTRMREFA-AEIESLGRLRHKHLVNLQG 410
           +G G FG+V                   K ++  +  E    E   L R+ H  +V L  
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL-- 58

Query: 411 WC--KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ-RFNIIKGIAAGLLYLHEEWEQ 467
               + +  L LV +Y P G L S L  ++    S E+ RF     I   L YLH     
Sbjct: 59  HYAFQTEEKLYLVLEYAPGGELFSHL--SKEGRFSEERARF-YAAEIVLALEYLHS---L 112

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
            +I+RD+K  N+L+DAD + +L DFGLA+       S T    GT  Y+APE+       
Sbjct: 113 GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCGTPEYLAPEVLLGKGYG 171

Query: 528 CSTDVFAYGVLLLEIATGRRPIDSD 552
            + D ++ GVLL E+ TG+ P  ++
Sbjct: 172 KAVDWWSLGVLLYEMLTGKPPFYAE 196

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 98.3 bits (246), Expect = 9e-23
 Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 45/212 (21%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           +++ E +G G +G VYK                      G+  T +RE    I  L  L+
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALRE----ISLLKELK 56

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA----AG 457
           H ++V L      +R L LV++Y     L   L D     LS     N+IK I      G
Sbjct: 57  HPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYL-DKRPGPLS----PNLIKSIMYQLLRG 110

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
           L Y H      ++HRD+K  N+LI+ D   +L DFGLAR F     ++T  VV T+ Y A
Sbjct: 111 LAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV-TLWYRA 166

Query: 518 PEL---ARTGKASCSTDVFAYGVLLLEIATGR 546
           PE+   ++    S + D+++ G +  E+ TG+
Sbjct: 167 PEILLGSK--HYSTAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 97.7 bits (243), Expect = 1e-22
 Identities = 59/208 (28%), Positives = 113/208 (54%), Gaps = 29/208 (13%)

Query: 365 KQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKH 404
           K  +VIG G FGEV  G L                      + R+F +E   +G+  H +
Sbjct: 7   KIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPN 66

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHE 463
           +++L+G   + + +++V +Y+ NGSLD+ L  ++  F +   Q   +++GIA+G+ YL  
Sbjct: 67  IIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVI--QLVGMLRGIASGMKYLS- 123

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELA 521
             +   +HRD+ + N+L+++++  ++ DFGL+R+ +    +  T   G I   + APE  
Sbjct: 124 --DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 181

Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRP 548
              K + ++DV++YG+++ E+ + G RP
Sbjct: 182 AYRKFTSASDVWSYGIVMWEVMSYGERP 209

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 96.9 bits (242), Expect = 2e-22
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 25/205 (12%)

Query: 368 EVIGTGGFGEVYK-----------------GVLPTRMRE-FAAEIESLGRLRHKHLVNLQ 409
           E IG G FG V K                 G +  + ++   +E+  L  L+H ++V   
Sbjct: 6   ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65

Query: 410 GWC--KRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLH--E 463
                +  + L +V +Y   G L  L+     E   +  E  + I+  +   L   H   
Sbjct: 66  DRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRS 125

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
           +    V+HRD+K  N+ +DA+ N +LGDFGLA++  H   S     VGT  Y++PE    
Sbjct: 126 DPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD-SSFAKTYVGTPYYMSPEQLNH 184

Query: 524 GKASCSTDVFAYGVLLLEIATGRRP 548
                 +D+++ G L+ E+     P
Sbjct: 185 MSYDEKSDIWSLGCLIYELCALSPP 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 96.7 bits (241), Expect = 3e-22
 Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 43/219 (19%)

Query: 368 EVIGTGGFGEVYKGVL----------------------PTRMREFAAEIESLGRLRHKHL 405
             +G G FG+V+ G                            ++F  E E L   +H+++
Sbjct: 11  RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI 70

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLL------------FDNENFVLSWEQRFNIIKG 453
           V   G C      ++V++Y+ +G L+  L             D+    L+  Q   I   
Sbjct: 71  VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ 130

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR---LFDHGKISHTTNVV 510
           IA+G++YL     Q  +HRD+ + N L+  D+  ++GDFG++R     D+ ++   T + 
Sbjct: 131 IASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTML- 186

Query: 511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
             I ++ PE     K +  +DV+++GV+L EI T G++P
Sbjct: 187 -PIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQP 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 94.8 bits (236), Expect = 8e-22
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 23/196 (11%)

Query: 368 EVIGTGGFGEVYKGVLPTRM----------------REFAAEIESLGRLRHKHLVNLQGW 411
           E IG G FG+VYKGVL                    R+F  E E L +  H ++V L G 
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH 471
           C +K+ + +V + +P GSL + L   +N  L+ ++   +    AAG+ YL     +  IH
Sbjct: 61  CVQKQPIYIVMELVPGGSLLTFLRKKKN-RLTVKKLLQMSLDAAAGMEYLES---KNCIH 116

Query: 472 RDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI--GYIAPELARTGKASCS 529
           RD+ + N L+  +   ++ DFG++R  + G I   ++ +  I   + APE    G+ +  
Sbjct: 117 RDLAARNCLVGENNVLKISDFGMSRE-EEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSE 175

Query: 530 TDVFAYGVLLLEIATG 545
           +DV++YG+LL E  + 
Sbjct: 176 SDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 94.9 bits (237), Expect = 2e-21
 Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 33/204 (16%)

Query: 370 IGTGGFGEVYKG-------------VLPTRMRE-----FAAEIESLGRLRHKHLVNLQGW 411
           IG G +G+VYK              +     +E        EI+ L +LRH ++V L+  
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEI 66

Query: 412 C--KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
              K K  + +V++Y+ +  L  LL D+     +  Q    +K +  GL YLH      +
Sbjct: 67  VTSKGKGSIYMVFEYMDH-DLTGLL-DSPEVKFTESQIKCYMKQLLEGLQYLHS---NGI 121

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL----ARTGK 525
           +HRD+K  N+LI+ D   +L DFGLAR +     +  TN V T+ Y  PEL     R G 
Sbjct: 122 LHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGP 181

Query: 526 ASCSTDVFAYGVLLLEIATGRRPI 549
                D+++ G +L E+  G +PI
Sbjct: 182 EV---DMWSVGCILAELFLG-KPI 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 93.3 bits (232), Expect = 4e-21
 Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 47/268 (17%)

Query: 370 IGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G+G FG V+ G       V    +RE       F  E + + +L H +LV L G C ++
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ 71

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           R + +V +Y+ NG L + L + +   L  E   ++   +   + YL        IHRD+ 
Sbjct: 72  RPIFIVTEYMANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLA 127

Query: 476 SGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGT---IGYIAPELARTGKASCSTD 531
           + N L+  D   ++ DFGLAR + D       T+  GT   + +  PE+    + S  +D
Sbjct: 128 ARNCLVGEDNVVKVSDFGLARYVLD----DQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD 183

Query: 532 VFAYGVLLLEIAT-GRRPIDSDHFILVDW----VLEFQHLGQVLDVVDPNLGSSYVVAEM 586
           V+++GVL+ E+ + G+ P +        +    V+E    G  L    P L  + V   M
Sbjct: 184 VWSFGVLMWEVFSEGKMPYER-------FSNSEVVESVSAGYRLY--RPKLAPTEVYTIM 234

Query: 587 ELVLQLGLLCSHQKAEARPTMRQVLRYL 614
                    C H+K E RP  +++L  L
Sbjct: 235 Y-------SCWHEKPEDRPAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 93.0 bits (231), Expect = 4e-21
 Identities = 78/261 (29%), Positives = 128/261 (49%), Gaps = 39/261 (14%)

Query: 370 IGTGGFGEV----YKGVLPTRMR----------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +GTG FG V    ++G     ++          EF  E + + +L H+ LV L G C ++
Sbjct: 12  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ 71

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           R + +V +Y+ NG L + L ++        Q   + K +  G+ YL  E +Q  IHRD+ 
Sbjct: 72  RPIYIVTEYMSNGCLLNYLREHGKR-FQPSQLLEMCKDVCEGMAYL--ESKQ-FIHRDLA 127

Query: 476 SGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGT---IGYIAPELARTGKASCSTD 531
           + N L+D     ++ DFGL+R + D       T+ VG+   + +  PE+    K S  +D
Sbjct: 128 ARNCLVDDQGCVKVSDFGLSRYVLD----DEYTSSVGSKFPVRWSPPEVLLYSKFSSKSD 183

Query: 532 VFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
           V+A+GVL+ E+ + G+ P +       +     + + Q L +  P+L S  V A M    
Sbjct: 184 VWAFGVLMWEVYSLGKMPYE-----RFNNSETVEKVSQGLRLYRPHLASEKVYAIM---- 234

Query: 591 QLGLLCSHQKAEARPTMRQVL 611
                C H+KAE RPT +Q+L
Sbjct: 235 ---YSCWHEKAEERPTFQQLL 252

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 93.1 bits (231), Expect = 4e-21
 Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 19/194 (9%)

Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH  LV L       
Sbjct: 14  LGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE- 72

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L D E   L      ++   +AAG+ Y+        IHRD++
Sbjct: 73  EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLR 129

Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           S N+L+   +  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 130 SANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 189

Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 190 GILLTELVTKGRVP 203

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 93.2 bits (232), Expect = 5e-21
 Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 40/217 (18%)

Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
            ++ +V+G+G FG VYKGV                      P   +E   E   +  + H
Sbjct: 9   LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH 68

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNEN-----FVLSW-EQRFNIIKGIAA 456
            H+V L G C   + + L+   +P G L   + ++++     ++L+W  Q       IA 
Sbjct: 69  PHVVRLLGICLSSQ-VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ-------IAK 120

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG-KISHTTNVVGTIGY 515
           G+ YL E   + ++HRD+ + NVL+    + ++ DFGLA+L D   K  H       I +
Sbjct: 121 GMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKW 177

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDS 551
           +A E       +  +DV++YGV + E+ T G +P + 
Sbjct: 178 MALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEG 214

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 90.8 bits (226), Expect = 2e-20
 Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 27/199 (13%)

Query: 368 EVIGTGGFGEVYKG------------VLPTR--MREFAAEIESLGRLRHKHLVNLQGWCK 413
           E +G G +G VYK             V+P    ++E   EI  L +    ++V   G   
Sbjct: 9   EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYF 68

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
           +  DL +V +Y   GS+  ++    N  L+ E+   I+     GL YLH       IHRD
Sbjct: 69  KNTDLWIVMEYCGAGSVSDIM-KITNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRD 124

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTT----NVVGTIGYIAPELARTGKASCS 529
           +K+GN+L++ +  A+L DFG++     G+++ T      V+GT  ++APE+ +    +  
Sbjct: 125 IKAGNILLNEEGQAKLADFGVS-----GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNK 179

Query: 530 TDVFAYGVLLLEIATGRRP 548
            D+++ G+  +E+A G+ P
Sbjct: 180 ADIWSLGITAIEMAEGKPP 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 91.2 bits (227), Expect = 3e-20
 Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 33/203 (16%)

Query: 360 ATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL 419
           A K FK+SE        +V K    T +RE    ++ L +LRH+++VNL+   +RK  L 
Sbjct: 30  AIKKFKESE-----DDEDVKK----TALRE----VKVLRQLRHENIVNLKEAFRRKGRLY 76

Query: 420 LVYDYIPNGSLDSLLFDNENFVLSWEQR---FNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           LV++Y+    L+ LL  +   +     R   + +++ IA    Y H      +IHRD+K 
Sbjct: 77  LVFEYVERTLLE-LLEASPGGLPPDAVRSYIWQLLQAIA----YCHS---HNIIHRDIKP 128

Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL----ARTGKASCSTDV 532
            N+L+      +L DFG AR       S  T+ V T  Y APEL       GK     DV
Sbjct: 129 ENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKP---VDV 185

Query: 533 FAYGVLLLEIATGRR--PIDSDH 553
           +A G ++ E+  G    P DSD 
Sbjct: 186 WAIGCIMAELLDGEPLFPGDSDI 208

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 91.1 bits (227), Expect = 3e-20
 Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 52/228 (22%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-------------------ESLGRL-RHK 403
           FK  ++IG G F  V         +E+A +I                   E L RL  H 
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL---- 459
            ++ L    + + +L  V +Y PNG L   +    +            +  AA +L    
Sbjct: 63  GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSL------DEKCTRFYAAEILLALE 116

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS--------------- 504
           YLH    + +IHRD+K  N+L+D DM+ ++ DFG A++ D                    
Sbjct: 117 YLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIE 173

Query: 505 ----HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
                  + VGT  Y++PEL     A  S+D++A G ++ ++ TG+ P
Sbjct: 174 KNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 89.4 bits (222), Expect = 7e-20
 Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 50/276 (18%)

Query: 365 KQSEVIGTGGFGEVYKGV---------------------LPTRMREFAAEIESLGRLRHK 403
           ++ E++G+G FG VY+G+                         +++   EI  L +L+H 
Sbjct: 3   RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHP 62

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++V   G  + + +L +  + +P GSL  LL    +F           + I  GL YLH 
Sbjct: 63  NIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSF--PEPVIRLYTRQILLGLEYLH- 119

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LAR 522
             ++  +HRD+K  N+L+D +   +L DFG+A+     + S   +  G+  ++APE +A+
Sbjct: 120 --DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV--EFSFAKSFKGSPYWMAPEVIAQ 175

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
            G    + D+++ G  +LE+ATG+ P          W  + + +  V       +G S  
Sbjct: 176 QGGYGLAADIWSLGCTVLEMATGKPP----------WS-QLEGVAAVF-----KIGRSKE 219

Query: 583 VAEMELVLQLG-----LLCSHQKAEARPTMRQVLRY 613
           +  +   L        L C  +    RPT  ++L +
Sbjct: 220 LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 93.0 bits (231), Expect = 2e-19
 Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 42/324 (12%)

Query: 318 VAVILLGTLLIFKLYRRIAQFEILED----WELD-----CPHRFRYSDLYTATKGFKQSE 368
           + + L+    +F   R   + + +E+    WEL             +D+ ++ K   +  
Sbjct: 640 LVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLK---EEN 696

Query: 369 VIGTGGFGEVYKGVLPTRMREF------------AAEIESLGRLRHKHLVNLQGWCKRKR 416
           VI  G  G  YKG       +F            ++EI  +G+L+H ++V L G C+ ++
Sbjct: 697 VISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEK 756

Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
              L+++YI   +L  +L +     LSWE+R  I  GIA  L +LH      V+  ++  
Sbjct: 757 GAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSP 811

Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
             ++ID      L      RL   G +   T    +  Y+APE   T   +  +D++ +G
Sbjct: 812 EKIIIDGKDEPHL------RLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFG 865

Query: 537 VLLLEIATGRRPIDSD---HFILVDWVLEFQHLGQVLDV-VDPNLGSSYVVAEMELV--L 590
           ++L+E+ TG+ P D++   H  +V+W   + +    LD+ +DP++     V + E+V  +
Sbjct: 866 LILIELLTGKSPADAEFGVHGSIVEWA-RYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVM 924

Query: 591 QLGLLCSHQKAEARPTMRQVLRYL 614
            L L C+     ARP    VL+ L
Sbjct: 925 NLALHCTATDPTARPCANDVLKTL 948

Length = 968

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 87.4 bits (216), Expect = 4e-19
 Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 31/260 (11%)

Query: 370 IGTGGFGEVYKG------------VLPTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G            + P  M    F  E + + +LRH+ LV L      +
Sbjct: 14  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 72

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 73  EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 129

Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 130 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 189

Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 190 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 237

Query: 595 LCSHQKAEARPTMRQVLRYL 614
            C  ++ E RPT   +  +L
Sbjct: 238 QCWRKEPEERPTFEYLQAFL 257

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 86.8 bits (215), Expect = 6e-19
 Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 39/226 (17%)

Query: 364 FKQSEVIGTGGFGEVY----------------------KGVLPTRMREFAAEIESLGRLR 401
           + + + +GTG F   Y                             +     EI  + RL 
Sbjct: 2   WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN 61

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H H++ + G         L  +++  GS+  LL     F  +    +   + +  GL YL
Sbjct: 62  HPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINY--TEQLLRGLSYL 119

Query: 462 HEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLA-RLFDHGKISHTT----NVVGTIGY 515
           HE     +IHRDVK  N+LID+     R+ DFG A RL    K +        ++GTI +
Sbjct: 120 HE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARL--AAKGTGAGEFQGQLLGTIAF 174

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRPID----SDHFILV 557
           +APE+ R  +   S DV++ G +++E+AT + P +    S+H  L+
Sbjct: 175 MAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI 220

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 87.3 bits (217), Expect = 7e-19
 Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 20/200 (10%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA---------------EIESLGRLRHKHLVNL 408
           +K  E IG G  GEVYK       +E A                EI  +   +H ++V+ 
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDY 80

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
                   +L +V +Y+  GSL  ++       ++  Q   + + +  GL YLH    Q 
Sbjct: 81  YDSYLVGDELWVVMEYMDGGSLTDII-TQNFVRMNEPQIAYVCREVLQGLEYLHS---QN 136

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
           VIHRD+KS N+L+  D + +L DFG A      K S   +VVGT  ++APE+ +      
Sbjct: 137 VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-SKRNSVVGTPYWMAPEVIKRKDYGP 195

Query: 529 STDVFAYGVLLLEIATGRRP 548
             D+++ G++ +E+A G  P
Sbjct: 196 KVDIWSLGIMCIEMAEGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 86.3 bits (214), Expect = 7e-19
 Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 50/272 (18%)

Query: 369 VIGTGGFGE-------------VYKGVLPTR-----MREFAAEIESLGRLRHKHLVNLQG 410
           V+G G FGE             V+K V  TR      R+   EI  L  L+H +++    
Sbjct: 7   VLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYN 66

Query: 411 WCKRKRDLLLVYDYIPNGSL-------DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
                  LL+  +Y   G+L          LF+ E  +    Q       I + + Y+H+
Sbjct: 67  HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQ-------IVSAVSYIHK 119

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
                ++HRD+K+ N+ +      +LGDFG++++    + S    VVGT  Y++PEL + 
Sbjct: 120 A---GILHRDIKTLNIFLTKAGLIKLGDFGISKILG-SEYSMAETVVGTPYYMSPELCQG 175

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYV 582
            K +  +D++A G +L E+ T +R  D+ + + LV  +++    G    VV       Y 
Sbjct: 176 VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ----GNYTPVVSV-----YS 226

Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
              + LV         Q  E RPT  +VL   
Sbjct: 227 SELISLVHS----LLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 86.8 bits (215), Expect = 7e-19
 Identities = 60/198 (30%), Positives = 85/198 (42%), Gaps = 24/198 (12%)

Query: 370 IGTGGFGEVY-----------------KGVLPTRMREFAA--EIESLGRLRHKHLVNLQG 410
           +G GGFGEV                  K  L  R  E  A  E + L ++  + +V+L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             + K DL LV   +  G L   +++         +       I  GL +LH+     ++
Sbjct: 61  AFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IV 117

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           +RD+K  NVL+D   N R+ D GLA     GK        GT GY+APE+ +      S 
Sbjct: 118 YRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIKGRAGTPGYMAPEVLQGEVYDFSV 175

Query: 531 DVFAYGVLLLEIATGRRP 548
           D FA G  L E+  GR P
Sbjct: 176 DWFALGCTLYEMIAGRSP 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 86.6 bits (215), Expect = 7e-19
 Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 37/211 (17%)

Query: 366 QSEVIGTGGFGEVYKGV------------------LPTRMREFAAEIESLGRLRHKHLVN 407
           +   IG G FG+VY  V                   P  ++E A E++ L  L+H +LV 
Sbjct: 4   RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVK 63

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLL----FDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
             G    +  + +  +Y   G+L+ LL      +E+ +    + +     +  GL YLH 
Sbjct: 64  YYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVI----RVY--TLQLLEGLAYLHS 117

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTT--NVVGTIGYIAPEL 520
                ++HRD+K  N+ +D +   +LGDFG A +L ++         ++ GT  Y+APE+
Sbjct: 118 ---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV 174

Query: 521 ARTGKASC---STDVFAYGVLLLEIATGRRP 548
              GK      + D+++ G ++LE+ATG+RP
Sbjct: 175 ITGGKGKGHGRAADIWSLGCVVLEMATGKRP 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 86.7 bits (215), Expect = 9e-19
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 26/200 (13%)

Query: 370 IGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCK 413
           +G G FG+VYK                      + +F  EI+ L   +H ++V L     
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF 72

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
            +  L ++ ++   G+LDS++ + E   L+  Q   + + +   L +LH      VIHRD
Sbjct: 73  YENKLWILIEFCDGGALDSIMLELER-GLTEPQIRYVCRQMLEALNFLHS---HKVIHRD 128

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA-----RTGKASC 528
           +K+GN+L+  D + +L DFG++           T  +GT  ++APE+      +      
Sbjct: 129 LKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDT-FIGTPYWMAPEVVACETFKDNPYDY 187

Query: 529 STDVFAYGVLLLEIATGRRP 548
             D+++ G+ L+E+A    P
Sbjct: 188 KADIWSLGITLIELAQMEPP 207

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 86.6 bits (215), Expect = 1e-18
 Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 31/199 (15%)

Query: 370 IGTGGFGEVYKG--------VLPTRMREFAA----------EIESLGRLRHKHLVNLQGW 411
           IG G +G VYK         V   +++              EI+ L  L H +++ L   
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDV 66

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLF---DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            + K DL LV+++     +D+ L+    +    L      + +  +  GL + H      
Sbjct: 67  FRHKGDLYLVFEF-----MDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG--- 118

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTGKAS 527
           ++HRD+K  N+LI+ +   +L DFGLAR F    +   T+ V T  Y APE L      S
Sbjct: 119 ILHRDLKPENLLINTEGVLKLADFGLARSFG-SPVRPYTHYVVTRWYRAPELLLGDKGYS 177

Query: 528 CSTDVFAYGVLLLEIATGR 546
              D+++ G +  E+ + R
Sbjct: 178 TPVDIWSVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 86.3 bits (214), Expect = 1e-18
 Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 19/168 (11%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSL-LFDNE-NFVLSWEQRFNI 450
           EI  L +LRH++LVNL    +RK+ L LV++++ +  LD L  + N  +     +  F I
Sbjct: 50  EIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQI 109

Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV 510
           ++GI     + H      +IHRD+K  N+L+      +L DFG AR        + T+ V
Sbjct: 110 LRGIE----FCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY-TDYV 161

Query: 511 GTIGYIAPEL----ARTGKASCSTDVFAYGVLLLEIATGRR--PIDSD 552
            T  Y APEL     + G+A    D++A G L+ E+ TG    P DSD
Sbjct: 162 ATRWYRAPELLVGDTKYGRA---VDIWAVGCLVTEMLTGEPLFPGDSD 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 85.3 bits (211), Expect = 2e-18
 Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 19/199 (9%)

Query: 365 KQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQG 410
           K  + +G G FGEV+ G       V    +++       F AE   + +L+H  LV L  
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYA 68

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
               +  + ++ +Y+ NGSL   L   E   L+  +  ++   IA G+ ++     +  I
Sbjct: 69  -VVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYI 124

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           HRD+++ N+L+   +  ++ DFGLARL +  + +        I + APE    G  +  +
Sbjct: 125 HRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 184

Query: 531 DVFAYGVLLLEIAT-GRRP 548
           DV+++G+LL EI T GR P
Sbjct: 185 DVWSFGILLTEIVTYGRIP 203

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 85.3 bits (211), Expect = 2e-18
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 18/190 (9%)

Query: 370 IGTGGFGEVYKGVLP---------------TRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 14  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 73

Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL    ++  IHRD+
Sbjct: 74  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 130

Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 131 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 190

Query: 535 YGVLLLEIAT 544
           +GVLL EIAT
Sbjct: 191 FGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 84.6 bits (209), Expect = 3e-18
 Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 25/208 (12%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVL--PTRM------------------REFAAEIESLGRLR 401
           K  K   ++GTG FGE+ +G L  P++                   R F AE  +LG+  
Sbjct: 5   KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD 64

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H ++V L+G   R   +++V +Y+ NG+LDS L  +E   L   Q   ++ G+A+G+ YL
Sbjct: 65  HSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEG-QLVAGQLMGMLPGLASGMKYL 123

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
               E   +H+ + +  VL+++D+  ++  F   +      I  T +    + + APE  
Sbjct: 124 S---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAI 180

Query: 522 RTGKASCSTDVFAYGVLLLEI-ATGRRP 548
           +    S ++DV+++G+++ E+ + G RP
Sbjct: 181 QYHHFSSASDVWSFGIVMWEVMSYGERP 208

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 84.8 bits (210), Expect = 4e-18
 Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 50/218 (22%)

Query: 368 EVIGTGGFGEVYKGV--------------LPTRMRE------------FAAEIESLGRLR 401
           E+IG G +G VY  +              LP  +                +EIE+L  L 
Sbjct: 7   ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD 66

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL-----FDNENFVLSWEQRFNIIKGIAA 456
           H ++V   G+   +  L +  +Y+P GS+ S L     F+ E  V  + ++      +  
Sbjct: 67  HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFE-EQLVRFFTEQ------VLE 119

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR----LFDHGKISHTTNVVGT 512
           GL YLH    + ++HRD+K+ N+L+DAD   ++ DFG+++    ++D+       ++ G+
Sbjct: 120 GLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDN---DQNMSMQGS 173

Query: 513 IGYIAPELARTGKASCS--TDVFAYGVLLLEIATGRRP 548
           + ++APE+  +     S   D+++ G ++LE+  GRRP
Sbjct: 174 VFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 84.3 bits (209), Expect = 5e-18
 Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 47/218 (21%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGRLRHKHLV 406
           ++  EVIG G    VY  +                   T + E   E++++ +  H ++V
Sbjct: 3   YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVV 62

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLL--------FDNENFVLSWEQRFNIIKGIAAGL 458
                     +L LV  Y+  GSL  ++         D E  + +      ++K +  GL
Sbjct: 63  KYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLD-EAIIAT------VLKEVLKGL 115

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL-ARLFDHGKISHT--TNVVGTIGY 515
            YLH       IHRD+K+GN+L+  D + ++ DFG+ A L D G  +       VGT  +
Sbjct: 116 EYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCW 172

Query: 516 IAPEL--ARTG---KASCSTDVFAYGVLLLEIATGRRP 548
           +APE+     G   KA    D++++G+  +E+ATG  P
Sbjct: 173 MAPEVMEQVHGYDFKA----DIWSFGITAIELATGAAP 206

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 83.5 bits (206), Expect = 7e-18
 Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 20/190 (10%)

Query: 368 EVIGTGGFGEVYKGVL---------------PTRMR-EFAAEIESLGRLRHKHLVNLQGW 411
           E++G G FGEV+KG L               P  ++ +F +E   L +  H ++V L G 
Sbjct: 1   ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGV 60

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH 471
           C +++ + +V + +P G   S L   ++  L  +Q        AAG+ YL     +  IH
Sbjct: 61  CTQRQPIYIVMELVPGGDFLSFLRKKKD-ELKTKQLVKFALDAAAGMAYLES---KNCIH 116

Query: 472 RDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTD 531
           RD+ + N L+  +   ++ DFG++R  D G  S +      I + APE    G+ S  +D
Sbjct: 117 RDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESD 176

Query: 532 VFAYGVLLLE 541
           V++YG+LL E
Sbjct: 177 VWSYGILLWE 186

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 83.4 bits (206), Expect = 7e-18
 Identities = 67/261 (25%), Positives = 121/261 (46%), Gaps = 33/261 (12%)

Query: 370 IGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G+G FG V+ G       V    + E       F  E + + +L H  LV L G C ++
Sbjct: 12  LGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ 71

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           + L +V +++ NG L + L   +   LS +   ++ + +  G+ YL        IHRD+ 
Sbjct: 72  KPLYIVTEFMENGCLLNYLRQRQG-KLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLA 127

Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L+ +    ++ DFG+ R     + + ++     + +  PE+    K S  +DV+++
Sbjct: 128 ARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSF 187

Query: 536 GVLLLEIAT-GRRPIDS-DHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           GVL+ E+ T G+ P +   ++ +V+ +     L +      P L S  V   M       
Sbjct: 188 GVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR------PKLASMTVYEVM------- 234

Query: 594 LLCSHQKAEARPTMRQVLRYL 614
             C H+K E RPT  ++LR +
Sbjct: 235 YSCWHEKPEGRPTFAELLRAI 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 83.4 bits (207), Expect = 1e-17
 Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 38/209 (18%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA-----------------AEIESLGRLRHKHLV 406
           F   E IG G FGEVYK +     +  A                  EI+ L + R  ++ 
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLL---FDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
              G   +   L ++ +Y   GS   LL     +E ++        I++ +  GL YLHE
Sbjct: 63  KYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAF------ILREVLLGLEYLHE 116

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN----VVGTIGYIAPE 519
              +  IHRD+K+ N+L+  + + +L DFG++     G+++ T +     VGT  ++APE
Sbjct: 117 ---EGKIHRDIKAANILLSEEGDVKLADFGVS-----GQLTSTMSKRNTFVGTPFWMAPE 168

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRP 548
           + +        D+++ G+  +E+A G  P
Sbjct: 169 VIKQSGYDEKADIWSLGITAIELAKGEPP 197

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 82.7 bits (204), Expect = 2e-17
 Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 31/265 (11%)

Query: 365 KQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQG 410
              + IG+G FG V+ G       V    +RE       F  E + + +L H  LV L G
Sbjct: 7   TLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYG 66

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            C  +  + LV++++ +G L   L   +    S E    +   +  G+ YL       VI
Sbjct: 67  VCTERSPICLVFEFMEHGCLSDYL-RAQRGKFSQETLLGMCLDVCEGMAYLES---SNVI 122

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           HRD+ + N L+  +   ++ DFG+ R     + + +T     + + +PE+    K S  +
Sbjct: 123 HRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKS 182

Query: 531 DVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELV 589
           DV+++GVL+ E+ + G+ P ++        V+E  + G  L    P L S  V   M+  
Sbjct: 183 DVWSFGVLMWEVFSEGKTPYENRS---NSEVVETINAGFRL--YKPRLASQSVYELMQ-- 235

Query: 590 LQLGLLCSHQKAEARPTMRQVLRYL 614
                 C  ++ E RP+   +L  L
Sbjct: 236 -----HCWKERPEDRPSFSLLLHQL 255

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 82.0 bits (202), Expect = 2e-17
 Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 19/194 (9%)

Query: 370 IGTGGFGEVYKG------------VLPTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G            + P  M    F  E + + +LRH  LV L      +
Sbjct: 14  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYA-VVSE 72

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +++  GSL   L + +   L   Q  ++   IA G+ Y+        IHRD++
Sbjct: 73  EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLR 129

Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 130 AANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 189

Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 190 GILLTELVTKGRVP 203

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 81.5 bits (201), Expect = 5e-17
 Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 10/156 (6%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRD--LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
           EI  L  L H+++V  +G C  +    L L+ +Y+P GSL   L  ++   L+  Q    
Sbjct: 56  EINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK---LNLAQLLLF 112

Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV 510
            + I  G+ YLH    Q  IHRD+ + NVL+D D   ++GDFGLA+    G   +     
Sbjct: 113 AQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 169

Query: 511 GT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           G   + + A E  +  K S ++DV+++GV L E+ T
Sbjct: 170 GDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 80.8 bits (199), Expect = 6e-17
 Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 18/194 (9%)

Query: 370 IGTGGFGEVYKG------------VLPTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G            + P  M  + F  E   +  L+H  LV L     ++
Sbjct: 14  LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 73

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + ++ +Y+  GSL   L  +E   +   +  +    IA G+ Y+     +  IHRD++
Sbjct: 74  EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLR 130

Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + NVL+   +  ++ DFGLAR+ +  + +        I + APE    G  +  +DV+++
Sbjct: 131 AANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 190

Query: 536 GVLLLEIAT-GRRP 548
           G+LL EI T G+ P
Sbjct: 191 GILLYEIVTYGKIP 204

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 81.4 bits (202), Expect = 6e-17
 Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 37/204 (18%)

Query: 368 EVIGTGGFGEVYKG--------VLPTRM-REFAA--------EIESLGRL-RHKHLVNLQ 409
           + +G G FG VY          V   +M ++F +        E++SL +L  H ++V L+
Sbjct: 5   KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLK 64

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
              +   +L  V++Y+  G+L  L+ D +    S     +II  I  GL ++H+      
Sbjct: 65  EVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGF 120

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT------TNVVGTIGYIAPE-LAR 522
            HRD+K  N+L+      ++ DFGLAR                T+ V T  Y APE L R
Sbjct: 121 FHRDLKPENLLVSGPEVVKIADFGLAR--------EIRSRPPYTDYVSTRWYRAPEILLR 172

Query: 523 TGKASCSTDVFAYGVLLLEIATGR 546
           +   S   D++A G ++ E+ T R
Sbjct: 173 STSYSSPVDIWALGCIMAELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 81.3 bits (200), Expect = 6e-17
 Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 36/267 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGRLRHKHLV 406
           F + E IG G FGEV+KG+                     + +   EI  L +    ++ 
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
              G   +   L ++ +Y+  GS   LL   E   L   Q   I++ I  GL YLH E +
Sbjct: 66  KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 122

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
              IHRD+K+ NVL+      +L DFG+A      +I      VGT  ++APE+ +    
Sbjct: 123 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPEVIKQSAY 178

Query: 527 SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM 586
               D+++ G+  +E+A G  P    H + V +++   +         P L  +Y     
Sbjct: 179 DSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN--------PPTLEGNYSKPLK 230

Query: 587 ELVLQLGLLCSHQKAEARPTMRQVLRY 613
           E V      C +++   RPT +++L++
Sbjct: 231 EFVEA----CLNKEPSFRPTAKELLKH 253

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 81.2 bits (200), Expect = 7e-17
 Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 44/271 (16%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHL 405
           F + E IG G FGEVYKG+   R +E  A                  EI  L +    ++
Sbjct: 6   FTKLERIGKGSFGEVYKGI-DNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 64

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD---NENFVLSWEQRFNIIKGIAAGLLYLH 462
               G   +   L ++ +Y+  GS   LL      E ++ +      I++ I  GL YLH
Sbjct: 65  TRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIAT------ILREILKGLDYLH 118

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
            E +   IHRD+K+ NVL+    + +L DFG+A      +I   T  VGT  ++APE+ +
Sbjct: 119 SERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIK 174

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
                   D+++ G+  +E+A G  P    H + V +++             P L   Y 
Sbjct: 175 QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS--------PPTLEGQYS 226

Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
               E V      C ++    RPT +++L++
Sbjct: 227 KPFKEFVEA----CLNKDPRFRPTAKELLKH 253

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 81.6 bits (202), Expect = 8e-17
 Identities = 68/230 (29%), Positives = 101/230 (43%), Gaps = 47/230 (20%)

Query: 359 TATKGFKQSEVIGTGGFGEVYKGV---------------------LP-TRMREFAAEIES 396
           +  + ++    +G G FGEVYK                        P T +RE    I+ 
Sbjct: 5   SKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALRE----IKI 60

Query: 397 LGRLRHKHLVNLQGWC-----KRKRDLLLVYDYIPNGSLD-SLLFDNENFVLSWEQRFNI 450
           L +L+H ++V L         K KR    VY   P    D S L +N +  L+  Q    
Sbjct: 61  LKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCY 120

Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-------HGKI 503
           +  +  G+ YLHE     ++HRD+K+ N+LID     ++ DFGLAR +D        G  
Sbjct: 121 MLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGG 177

Query: 504 SHT---TNVVGTIGYIAPEL-ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
             T   TN+V T  Y  PEL     + + + D++  G +  E+ T RRPI
Sbjct: 178 GGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFT-RRPI 226

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 80.4 bits (199), Expect = 9e-17
 Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 43/274 (15%)

Query: 362 KGFKQSEVIGTGGFGEVYK-----------------GVLPTRMREFAAEIESLGRLRHKH 404
              +    +G G  G V K                  +     ++   E++ L +    +
Sbjct: 1   DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPY 60

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGL 458
           +V   G      D+ +  +Y+  GSLD +L          + R        I   +  GL
Sbjct: 61  IVGFYGAFYNNGDISICMEYMDGGSLDKIL-------KEVQGRIPERILGKIAVAVLKGL 113

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVGTIGYIA 517
            YLHE+ +  +IHRDVK  N+L+++    +L DFG++ +L +    S     VGT  Y+A
Sbjct: 114 TYLHEKHK--IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN----SLAKTFVGTSSYMA 167

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           PE  +    S  +D+++ G+ L+E+ATGR P              F+ L  +++   P L
Sbjct: 168 PERIQGNDYSVKSDIWSLGLSLIELATGRFPYPP---ENDPPDGIFELLQYIVNEPPPRL 224

Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
            S     + +  +    LC  +    RP+ +++L
Sbjct: 225 PSGKFSPDFQDFVN---LCLIKDPRERPSYKELL 255

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 80.4 bits (199), Expect = 9e-17
 Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 26/202 (12%)

Query: 370 IGTGGFGEVYKGVLPTRMREFA-------------------AEIESLGRLRHKHLVNLQG 410
           +G GGFG V    + ++ R FA                   +E E L    H  +V L  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             K K+ + ++ +Y   G L ++L D   F   +  RF  I  +     YLH    + +I
Sbjct: 61  TFKDKKYIYMLMEYCLGGELWTILRDRGLFD-EYTARF-YIACVVLAFEYLHN---RGII 115

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           +RD+K  N+L+D++   +L DFG A+    G+ + T    GT  Y+APE+        S 
Sbjct: 116 YRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT--FCGTPEYVAPEIILNKGYDFSV 173

Query: 531 DVFAYGVLLLEIATGRRPIDSD 552
           D ++ G+LL E+ TGR P   D
Sbjct: 174 DYWSLGILLYELLTGRPPFGED 195

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 80.6 bits (199), Expect = 9e-17
 Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 44/215 (20%)

Query: 367 SEVIGTGGFGEVYKGVL----------------------PTRMREFAAEIESLGRLRHKH 404
            E +G G FG+VYKG L                      P   +EF  E E +  L+H +
Sbjct: 10  LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPN 69

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNI 450
           +V L G C +++   ++++Y+ +G L   L  N                  L      +I
Sbjct: 70  IVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHI 129

Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF---DHGKISHTT 507
              IAAG+ YL        +HRD+ + N L+   +  ++ DFGL+R     D+ ++    
Sbjct: 130 AIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQS-- 184

Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
             +  + ++ PE    GK +  +D++++GV+L EI
Sbjct: 185 KSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 80.7 bits (200), Expect = 1e-16
 Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 34/211 (16%)

Query: 364 FKQSEVIGTGGFGEV----YKG--------VLP----TRMREFA---AEIESLGRLRHKH 404
           F+  + +GTG FG V    +KG        +L      ++++      E   L  +RH  
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPF 62

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LVNL G  +   +L LV +Y+P G L S L  +  F      RF   + +   L YLH  
Sbjct: 63  LVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPV-ARFYAAQ-VVLALEYLHSL 120

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART- 523
               +++RD+K  N+L+D+D   ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 121 ---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVK----GRTYTLCGTPEYLAPEIILSK 173

Query: 524 --GKASCSTDVFAYGVLLLEIATGRRPIDSD 552
             GKA    D +A G+L+ E+  G  P   D
Sbjct: 174 GYGKAV---DWWALGILIYEMLAGYPPFFDD 201

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 68/272 (25%), Positives = 107/272 (39%), Gaps = 57/272 (20%)

Query: 370 IGTGGFGEVYKGV--------------------LPTRMREFAAEIESLGRLRHKHLVNLQ 409
           +G G FG V KGV                    +    +EF  E   + +L H  +V L 
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENF----VLSWEQRFNIIKGIAAGLLYLHEEW 465
           G CK +  L+LV +  P G L   L          +     +      +A G+ YL    
Sbjct: 63  GVCKGEP-LMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQ------VAMGMAYLES-- 113

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELART 523
            +  +HRD+ + NVL+     A++ DFG++R    G   +     G   + + APE    
Sbjct: 114 -KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY 172

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRPI----DSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
           GK S  +DV++YGV L E  + G +P      ++       V+     G+ L    P   
Sbjct: 173 GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE-------VIAMLESGERLP--RPEEC 223

Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQV 610
              + + M       L C   + E RPT  ++
Sbjct: 224 PQEIYSIM-------LSCWKYRPEDRPTFSEL 248

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 79.6 bits (196), Expect = 1e-16
 Identities = 77/267 (28%), Positives = 116/267 (43%), Gaps = 33/267 (12%)

Query: 362 KGFKQSEVIGTGGFGEV----YKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQ 409
           K  K  + IG G FG+V    Y+G              + F AE   + +LRH +LV L 
Sbjct: 6   KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 65

Query: 410 G-WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
           G   + K  L +V +Y+  GSL   L      VL  +        +   + YL       
Sbjct: 66  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NN 122

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+  D  A++ DFGL +  +      T  +   + + APE  R  K S 
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFST 178

Query: 529 STDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME 587
            +DV+++G+LL EI + GR P      I +  V+     G  +D  D   G   VV   +
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPR---IPLKDVVPRVEKGYKMDAPD---GCPPVV--YD 230

Query: 588 LVLQLGLLCSHQKAEARPTMRQVLRYL 614
           ++ Q    C H  A  RP+  Q+   L
Sbjct: 231 VMKQ----CWHLDAATRPSFLQLREQL 253

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 79.6 bits (196), Expect = 2e-16
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 368 EVIGTGGFGEVYKG-VLPTRM-----------REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           E+IG G FG V +G     ++           + F  E   + +L HK+LV L G     
Sbjct: 12  EIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLG-VILH 70

Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             L +V + +  G+L + L      ++S  Q       +A G+ YL     + ++HRD+ 
Sbjct: 71  NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLA 127

Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  D  A++ DFGLAR+   G      N    + + APE  +  K S  +DV++Y
Sbjct: 128 ARNILVSEDGVAKVSDFGLARVGSMG----VDNSKLPVKWTAPEALKHKKFSSKSDVWSY 183

Query: 536 GVLLLEI-ATGRRP 548
           GVLL E+ + GR P
Sbjct: 184 GVLLWEVFSYGRAP 197

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 20/171 (11%)

Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWC--KRKRDLLLVYDYIPNGSLDSLL------F 435
              +R+F  EIE L  L+H ++V  +G C    +R+L LV +Y+P GSL   L       
Sbjct: 46  AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERL 105

Query: 436 DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA 495
           D+   +L   Q       I  G+ YL     +  +HRD+ + N+L++++   ++GDFGL 
Sbjct: 106 DHRKLLLYASQ-------ICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLT 155

Query: 496 RLFDHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           ++    K  +     G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 31/206 (15%)

Query: 368 EVIGTGGFGEVYKG--------------------VLPTRMREFAAEIESLGRLRHKHLVN 407
           + +G G FG V +G                     L   M +F  E   +  L H++L+ 
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIKGIAAGLLYLHEEW 465
           L G       L++V +  P GSL   L  +    F++S    + +   IA G+ YL    
Sbjct: 61  LYG-VVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAV--QIANGMRYLES-- 115

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT--NVVGTIGYIAPELART 523
            +  IHRD+ + N+L+ +D   ++GDFGL R     +  +    ++     + APE  RT
Sbjct: 116 -KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT 174

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRP 548
              S ++DV+ +GV L E+ T G  P
Sbjct: 175 RTFSHASDVWMFGVTLWEMFTYGEEP 200

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 34/209 (16%)

Query: 364 FKQSEVIGTGGFGEVYKGV-LPTR----------------MREFAAEIESLGRLRH---K 403
           +++ E+IG G +G VY+G  +PT                 + +   E+  L +LR     
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62

Query: 404 HLVNLQG-WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN--IIKGIAAGLLY 460
           ++    G + K  R L ++ +Y   GS+ +L+           +++   II+ +   L Y
Sbjct: 63  NITKYYGSYLKGPR-LWIIMEYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKY 116

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           +H+     VIHRD+K+ N+L+    N +L DFG+A L +      +T  VGT  ++APE+
Sbjct: 117 IHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRST-FVGTPYWMAPEV 172

Query: 521 ARTGKA-SCSTDVFAYGVLLLEIATGRRP 548
              GK      D+++ G+ + E+ATG  P
Sbjct: 173 ITEGKYYDTKADIWSLGITIYEMATGNPP 201

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 79.7 bits (196), Expect = 3e-16
 Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 32/212 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGV---------LPTRMR------------EFAAEIESLGRLRH 402
            K+ +V+G+G FG VYKG+         +P  ++            EF  E   +  + H
Sbjct: 9   LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 68

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            HLV L G C     + LV   +P+G L   + ++++ + S +   N    IA G++YL 
Sbjct: 69  PHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGS-QLLLNWCVQIAKGMMYLE 126

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG---TIGYIAPE 519
           E   + ++HRD+ + NVL+ +  + ++ DFGLARL +  +  +  N  G    I ++A E
Sbjct: 127 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY--NADGGKMPIKWMALE 181

Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                K +  +DV++YGV + E+ T G +P D
Sbjct: 182 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 213

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 80.0 bits (198), Expect = 3e-16
 Identities = 68/233 (29%), Positives = 96/233 (41%), Gaps = 78/233 (33%)

Query: 370 IGTGGFGEVYKGVL--PTRMREFAA-------------------EIESLGRLRHKHLVNL 408
           IG G +G VYK         +E+A                    EI  L  L+H+++V+L
Sbjct: 8   IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67

Query: 409 QGWC--KRKRDLLLVYDY-------------------IPNGSLDSLLFDNENFVLSWEQR 447
                    + + L++DY                   IP   + SLL+          Q 
Sbjct: 68  VEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLW----------QI 117

Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR----LGDFGLARLFDH--G 501
            N       G+ YLH  W   V+HRD+K  N+L+  +   R    +GD GLARLF+    
Sbjct: 118 LN-------GVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLK 167

Query: 502 KISHTTNVVGTIGYIAPEL---AR--TGKASCSTDVFAYGVLLLEIATGRRPI 549
            ++    VV TI Y APEL   AR  T KA    D++A G +  E+ T   PI
Sbjct: 168 PLADLDPVVVTIWYRAPELLLGARHYT-KA---IDIWAIGCIFAELLT-LEPI 215

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 79.1 bits (195), Expect = 3e-16
 Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 39/212 (18%)

Query: 369 VIGTGGFGEVYKGV--------------LPT-------RMRE----FAAEIESLGRLRHK 403
           +IG+G FG VY G+              LP+       R R      A EI  L  L+H+
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF--NIIKGIAAGLLYL 461
           ++V   G       L +  +Y+P GS+ +LL    N   ++E+    N ++ I  GL YL
Sbjct: 67  NIVQYLGSSLDADHLNIFLEYVPGGSVAALL----NNYGAFEETLVRNFVRQILKGLNYL 122

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-----VVGTIGYI 516
           H    + +IHRD+K  N+L+D     ++ DFG+++  +   +S  TN     + G++ ++
Sbjct: 123 HN---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWM 179

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           APE+ +    +   D+++ G L++E+ TG+ P
Sbjct: 180 APEVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 79.4 bits (196), Expect = 3e-16
 Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 57/221 (25%)

Query: 369 VIGTGGFGEVYKGV---------------------LP-TRMREFAAEIESLGRLRHKHLV 406
            IG G +G+VYK                        P T +R    EI+ L +L H+++V
Sbjct: 14  QIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIR----EIKILRQLNHRNIV 69

Query: 407 NLQ----------GWCKRKRDLLLVYDYIPN---GSLDSLLFD-NENFVLSWEQRFNIIK 452
           NL+           + K K    LV++Y+ +   G L+S L   +E+ + S       +K
Sbjct: 70  NLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKS------FMK 123

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            +  GL Y H   ++  +HRD+K  N+L++     +L DFGLARL++  +    TN V T
Sbjct: 124 QLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVIT 180

Query: 513 IGYIAPEL----ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
           + Y  PEL     R G A    DV++ G +L E+ T ++PI
Sbjct: 181 LWYRPPELLLGEERYGPA---IDVWSCGCILGELFT-KKPI 217

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 78.8 bits (194), Expect = 3e-16
 Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 41/276 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRH 402
           + + EV+G G +G VY G+                           +   E++ L  L+H
Sbjct: 2   WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH 61

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V   G C     + +  +++P GS+ S+L            ++   K I  G+ YLH
Sbjct: 62  VNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYT--KQILDGVAYLH 119

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD----HGKISHT-TNVVGTIGYIA 517
                 V+HRD+K  NV++  +   +L DFG AR       HG  S+   ++ GT  ++A
Sbjct: 120 N---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMA 176

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           PE+         +D+++ G  + E+ATG+ P+ S     +D +    ++G    ++ P L
Sbjct: 177 PEVINESGYGRKSDIWSIGCTVFEMATGKPPLAS-----MDRLAAMFYIGAHRGLM-PRL 230

Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
             S+  A ++ V      C  +    RP+  Q+LR+
Sbjct: 231 PDSFSAAAIDFV----TSCLTRDQHERPSALQLLRH 262

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 78.9 bits (194), Expect = 4e-16
 Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 23/179 (12%)

Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDS----------LLFDN 437
           ++F  E E L  L+H+H+V   G C     L++V++Y+ +G L+           +L D 
Sbjct: 52  KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 111

Query: 438 E----NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG 493
           +       L   Q  +I   IA+G++YL     Q  +HRD+ + N L+ A++  ++GDFG
Sbjct: 112 QPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFG 168

Query: 494 LARLF---DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           ++R     D+ ++   T +   I ++ PE     K +  +DV+++GV+L EI T G++P
Sbjct: 169 MSRDVYSTDYYRVGGHTML--PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 225

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 78.9 bits (195), Expect = 5e-16
 Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 36/208 (17%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           +K    IG G  G V+K                      G+    +RE    I++L   +
Sbjct: 2   YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALRE----IKALQACQ 57

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H ++V L          +LV +Y+P   L  +L D E   L   Q  + ++ +  G+ Y+
Sbjct: 58  HPYVVKLLDVFPHGSGFVLVMEYMP-SDLSEVLRDEER-PLPEAQVKSYMRMLLKGVAYM 115

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL- 520
           H      ++HRD+K  N+LI AD   ++ DFGLARLF   +    ++ V T  Y APEL 
Sbjct: 116 HAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELL 172

Query: 521 --ARTGKASCSTDVFAYGVLLLEIATGR 546
             AR  K     D++A G +  E+  G 
Sbjct: 173 YGAR--KYDPGVDLWAVGCIFAELLNGS 198

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 78.8 bits (195), Expect = 5e-16
 Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 19/189 (10%)

Query: 370 IGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS 429
           I  G   E   G+  T +RE    I+ L  L+H +++ L      K ++ LV++++    
Sbjct: 33  IKLGERKEAKDGINFTALRE----IKLLQELKHPNIIGLLDVFGHKSNINLVFEFME-TD 87

Query: 430 LDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL 489
           L+ ++  +++ VL+     + +     GL YLH  W   ++HRD+K  N+LI +D   +L
Sbjct: 88  LEKVI-KDKSIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKL 143

Query: 490 GDFGLARLFDHGKISHTTNVVGTIGYIAPEL---ARTGKASCSTDVFAYGVLLLEIATGR 546
            DFGLAR F       T  VV T  Y APEL   AR        D+++ G +  E+   R
Sbjct: 144 ADFGLARSFGSPNRKMTHQVV-TRWYRAPELLFGAR--HYGVGVDMWSVGCIFAELLL-R 199

Query: 547 RPI---DSD 552
            P    DSD
Sbjct: 200 VPFLPGDSD 208

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 78.6 bits (193), Expect = 6e-16
 Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 20/176 (11%)

Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF-----------D 436
           ++F  E E L  L+H+H+V   G C     L++V++Y+ +G L+  L             
Sbjct: 52  KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 111

Query: 437 NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR 496
           N    L+  Q  +I + IAAG++YL     Q  +HRD+ + N L+  ++  ++GDFG++R
Sbjct: 112 NRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSR 168

Query: 497 LF---DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
                D+ ++   T +   I ++ PE     K +  +DV++ GV+L EI T G++P
Sbjct: 169 DVYSTDYYRVGGHTML--PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 222

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 77.7 bits (192), Expect = 7e-16
 Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 26/205 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-----------------EIESLGRLRHKHLV 406
           ++  + IG+G +G+VYK        E  A                 EI  L   RH ++V
Sbjct: 5   YELIQRIGSGTYGDVYKARD-IATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIV 63

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
              G   R+  L +V +Y   GSL  + +      LS  Q   + +    GL YLHE   
Sbjct: 64  AYFGSYLRRDKLWIVMEYCGGGSLQDI-YQVTRGPLSELQIAYVCRETLKGLAYLHE--- 119

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA---RT 523
              IHRD+K  N+L+  D + +L DFG++       I+   + +GT  ++APE+A   R 
Sbjct: 120 TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTA-TIAKRKSFIGTPYWMAPEVAAVERK 178

Query: 524 GKASCSTDVFAYGVLLLEIATGRRP 548
           G      D++A G+  +E+A  + P
Sbjct: 179 GGYDGKCDIWALGITAIELAELQPP 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 77.6 bits (191), Expect = 1e-15
 Identities = 65/200 (32%), Positives = 92/200 (46%), Gaps = 25/200 (12%)

Query: 370 IGTGGFGEVY-----------------KGVLPTRMREFAAEIES--LGRLRHKHLVNLQG 410
           +G GGFGEV                  K  L  R     A +E   L ++  + +V+L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLF--DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
             + K DL LV   +  G L   ++  D EN      +       I +GL +LH+   + 
Sbjct: 61  AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RR 117

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
           +I+RD+K  NVL+D D N R+ D GLA     G+ S T    GT G++APEL +  +   
Sbjct: 118 IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-SKTKGYAGTPGFMAPELLQGEEYDF 176

Query: 529 STDVFAYGVLLLEIATGRRP 548
           S D FA GV L E+   R P
Sbjct: 177 SVDYFALGVTLYEMIAARGP 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 77.3 bits (191), Expect = 1e-15
 Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 14/142 (9%)

Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENF-VLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
           K++L LV +Y+P G L SLL   EN   L  +     I  I   L YLH      +IHRD
Sbjct: 65  KKNLYLVMEYLPGGDLASLL---ENVGSLDEDVARIYIAEIVLALEYLHS---NGIIHRD 118

Query: 474 VKSGNVLIDADMNARLGDFGLAR-------LFDHGKISHTTNVVGTIGYIAPELARTGKA 526
           +K  N+LID++ + +L DFGL++       +  +        +VGT  YIAPE+      
Sbjct: 119 LKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGH 178

Query: 527 SCSTDVFAYGVLLLEIATGRRP 548
           S + D ++ G +L E   G  P
Sbjct: 179 SKTVDWWSLGCILYEFLVGIPP 200

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 77.1 bits (190), Expect = 2e-15
 Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 7/150 (4%)

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L    +    L L+ DY+  G L + L+  E+F  S E R  I + + A L +LH+ 
Sbjct: 67  LVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTES-EVRVYIAEIVLA-LDHLHQ- 123

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+L+D++ +  L DFGL++ F   +     +  GTI Y+APE+ R G
Sbjct: 124 --LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGG 181

Query: 525 KA--SCSTDVFAYGVLLLEIATGRRPIDSD 552
                 + D ++ GVL  E+ TG  P   D
Sbjct: 182 SGGHDKAVDWWSLGVLTFELLTGASPFTVD 211

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 76.5 bits (188), Expect = 2e-15
 Identities = 60/198 (30%), Positives = 86/198 (43%), Gaps = 24/198 (12%)

Query: 370 IGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHK-------------------HLVNLQG 410
           +G GGFGEV    +    + +A +     RL+ K                    +VNL  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAY 60

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             + K  L LV   +  G L   +++     L  E+  +    I  G+L+LH      ++
Sbjct: 61  AFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIV 117

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           +RD+K  NVL+D   N RL D GLA     GK    T   GT GY+APE+ +    S   
Sbjct: 118 YRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRAGTNGYMAPEILKEEPYSYPV 175

Query: 531 DVFAYGVLLLEIATGRRP 548
           D FA G  + E+  GR P
Sbjct: 176 DWFAMGCSIYEMVAGRTP 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 76.6 bits (189), Expect = 2e-15
 Identities = 61/200 (30%), Positives = 85/200 (42%), Gaps = 35/200 (17%)

Query: 370 IGTGGFGEVYKGVLPTRMREFAA----------------------EIESLGRLRHKHLVN 407
           IG G +G V+K     R RE                         EI  L +L+H +LVN
Sbjct: 9   IGEGSYGVVFK----CRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVN 64

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L    +RKR L LV++Y  +  L+ L  +     +       II      + + H+    
Sbjct: 65  LIEVFRRKRKLHLVFEYCDHTVLNEL--EKNPRGVPEHLIKKIIWQTLQAVNFCHK---H 119

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG--K 525
             IHRDVK  N+LI      +L DFG AR+       + T+ V T  Y APEL   G  +
Sbjct: 120 NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY-TDYVATRWYRAPELL-VGDTQ 177

Query: 526 ASCSTDVFAYGVLLLEIATG 545
                DV+A G +  E+ TG
Sbjct: 178 YGPPVDVWAIGCVFAELLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 43/216 (19%)

Query: 365 KQSEVIGTGGFGEVYKGVLPT----------RM---------REFAAEIESLGRL-RHKH 404
           K  +VIG G FG+V K  +            RM         R+FA E+E L +L  H +
Sbjct: 10  KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 69

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF--------------VLSWEQRFNI 450
           ++NL G C+ +  L L  +Y P+G+L   L  +                  LS +Q  + 
Sbjct: 70  IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 129

Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV 510
              +A G+ YL +   +  IHRD+ + N+L+  +  A++ DFGL+R    G+  +    +
Sbjct: 130 AADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTM 182

Query: 511 G--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           G   + ++A E       + ++DV++YGVLL EI +
Sbjct: 183 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 218

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 76.2 bits (188), Expect = 3e-15
 Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 39/213 (18%)

Query: 368 EVIGTGGFGEVYKGVL---------------PTRMREFAAEIESLGRL-RHKHLVNLQGW 411
           EVIG G +G+VYK                       E   E   L +   H ++    G 
Sbjct: 12  EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYG- 70

Query: 412 CKRKRD-------LLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLH 462
              K++       L LV +    GS+  L+     +   L  E    I++    GL YLH
Sbjct: 71  AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH 130

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE--- 519
           E     VIHRD+K  N+L+  +   +L DFG++   D   +      +GT  ++APE   
Sbjct: 131 E---NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDS-TLGRRNTFIGTPYWMAPEVIA 186

Query: 520 ----LARTGKASCSTDVFAYGVLLLEIATGRRP 548
                  +  A    DV++ G+  +E+A G+ P
Sbjct: 187 CDEQPDASYDARS--DVWSLGITAIELADGKPP 217

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 76.2 bits (187), Expect = 3e-15
 Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 49/220 (22%)

Query: 370 IGTGGFGEVY----KGVLPTRMR-----------------EFAAEIESLGRLRHKHLVNL 408
           +G G FG+V+      +LP + +                 +F  E E L  L+H+H+V  
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 409 QGWCKRKRDLLLVYDYIPNGSL---------DSLLFDNENFV----LSWEQRFNIIKGIA 455
            G C   R LL+V++Y+ +G L         D+ +      V    L+  Q   I   IA
Sbjct: 73  YGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIA 132

Query: 456 AGLLY---LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF---DHGKISHTTNV 509
           +G++Y   LH       +HRD+ + N L+   +  ++GDFG++R     D+ ++   T +
Sbjct: 133 SGMVYLASLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 186

Query: 510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
              I ++ PE     K +  +D++++GV+L EI T G++P
Sbjct: 187 --PIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 76.2 bits (187), Expect = 3e-15
 Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 32/211 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGRLRHKHLV 406
           F + E IG G FGEV+KG+                     + +   EI  L +    ++ 
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLL----FDNENFVLSWEQRFNIIKGIAAGLLYLH 462
              G   +   L ++ +Y+  GS   LL    FD         Q   ++K I  GL YLH
Sbjct: 66  KYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEF-------QIATMLKEILKGLDYLH 118

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
            E +   IHRD+K+ NVL+    + +L DFG+A      +I   T  VGT  ++APE+ +
Sbjct: 119 SEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIQ 174

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
                   D+++ G+  +E+A G  P    H
Sbjct: 175 QSAYDSKADIWSLGITAIELAKGEPPNSDMH 205

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 75.8 bits (186), Expect = 4e-15
 Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 19/200 (9%)

Query: 364 FKQSEVIGTGGFGEVY------------KGVLPTRM--REFAAEIESLGRLRHKHLVNLQ 409
            K  + +G G FGEV+            K + P  M    F AE   +  L+H  LV L 
Sbjct: 8   LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 67

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
               ++  + ++ +++  GSL   L  +E       +  +    IA G+ ++ +   +  
Sbjct: 68  AVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNY 123

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+++ N+L+ A +  ++ DFGLAR+ +  + +        I + APE    G  +  
Sbjct: 124 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 183

Query: 530 TDVFAYGVLLLEIAT-GRRP 548
           +DV+++G+LL+EI T GR P
Sbjct: 184 SDVWSFGILLMEIVTYGRIP 203

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 76.0 bits (187), Expect = 4e-15
 Identities = 57/242 (23%), Positives = 113/242 (46%), Gaps = 21/242 (8%)

Query: 378 VYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN 437
           V+ G   +  ++   E++ +   R  ++V+  G    + ++ +  +++  GSLD +    
Sbjct: 38  VHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIY--K 95

Query: 438 ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL 497
           +   +  E    I   +  GL YL+      ++HRD+K  N+L+++    +L DFG++  
Sbjct: 96  KGGPIPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNSRGQIKLCDFGVS-- 151

Query: 498 FDHGKI--SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP-----ID 550
              G++  S     VGT  Y++PE  + GK +  +DV++ G+ ++E+A G+ P     ID
Sbjct: 152 ---GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208

Query: 551 SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQV 610
            D       +L+     Q++    P L SS    ++   +     C  +    RPT +Q+
Sbjct: 209 DDGQDDPMGILDLLQ--QIVQEPPPRLPSSDFPEDLRDFVD---ACLLKDPTERPTPQQL 263

Query: 611 LR 612
             
Sbjct: 264 CA 265

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 75.4 bits (185), Expect = 5e-15
 Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 25/207 (12%)

Query: 368 EVIGTGGFGEVY--KG---------------VLPTRMREFAA-EIESLGRLRHKHLVNLQ 409
           + IG G FG++Y  K                 +P + +E +  E+  L +++H ++V   
Sbjct: 6   KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF 65

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
              +    L +V +Y   G L   +      + S +Q  +    I+ GL ++H+   + +
Sbjct: 66  ASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKI 122

Query: 470 IHRDVKSGNVLIDAD-MNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
           +HRD+KS N+ +  + M A+LGDFG+AR L D  ++++T   VGT  Y++PE+ +    +
Sbjct: 123 LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT--CVGTPYYLSPEICQNRPYN 180

Query: 528 CSTDVFAYGVLLLEIATGRRPIDSDHF 554
             TD+++ G +L E+ T + P + ++ 
Sbjct: 181 NKTDIWSLGCVLYELCTLKHPFEGNNL 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 74.7 bits (183), Expect = 6e-15
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 22/192 (11%)

Query: 368 EVIGTGGFGEVYKG----------------VLPTRMR-EFAAEIESLGRLRHKHLVNLQG 410
           E IG G FGEV+ G                 LP  ++ +F  E   L +  H ++V L G
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            C +K+ + +V + +  G   + L   E   L  ++   +++  AAG+ YL     +  I
Sbjct: 61  VCTQKQPIYIVMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLES---KHCI 116

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT-IGYIAPELARTGKASCS 529
           HRD+ + N L+      ++ DFG++R  + G  + T  +    + + APE    G+ S  
Sbjct: 117 HRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSE 176

Query: 530 TDVFAYGVLLLE 541
           +DV+++G+LL E
Sbjct: 177 SDVWSFGILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 75.4 bits (185), Expect = 6e-15
 Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 24/204 (11%)

Query: 364 FKQSEVIGTGGFGEV-----------------YKGVLPTRMREFAA--EIESLGRLRHKH 404
           F+Q  V+G GGFGEV                  K  +  R  E  A  E + L ++  + 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +VNL    + K  L LV   +  G L   +++  N     E+       I  GL  LH E
Sbjct: 62  VVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
                ++RD+K  N+L+D   + R+ D GLA     G+       VGT+GY+APE+    
Sbjct: 122 ---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES--IRGRVGTVGYMAPEVLNNQ 176

Query: 525 KASCSTDVFAYGVLLLEIATGRRP 548
           + + S D +  G L+ E+  G+ P
Sbjct: 177 RYTLSPDYWGLGCLIYEMIEGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 75.1 bits (185), Expect = 7e-15
 Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 53/280 (18%)

Query: 370 IGTGGFGEVYKGVLP----------------------TRMREFAAEIESLGRLRHKHLVN 407
           +G G FG VY+G+                            EF  E   +      H+V 
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNENF----VLSWEQRFNIIKGIAAGLL 459
           L G     +  L+V + +  G L S L     + EN       + ++   +   IA G+ 
Sbjct: 74  LLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL     +  +HRD+ + N ++  D+  ++GDFG+ R +++          +  + ++AP
Sbjct: 134 YLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 190

Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRP-IDSDHFILVDWVLEFQHLGQVLDVVD-- 574
           E  + G  +  +DV+++GV+L E+AT   +P     +    + VL+F   G  LD+ +  
Sbjct: 191 ESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN----EEVLKFVIDGGHLDLPENC 246

Query: 575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           P+            +L+L  +C     + RPT  +++  L
Sbjct: 247 PD-----------KLLELMRMCWQYNPKMRPTFLEIVSSL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 74.4 bits (183), Expect = 9e-15
 Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 31/222 (13%)

Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFA-------------------AEIESLGRLR 401
              FK  + IG G F  VYK +     R  A                    EI+ L +L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLL 459
           H +++          +L +V +    G L  ++  F  +  ++     +     + + L 
Sbjct: 61  HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALE 120

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT---NVVGTIGYI 516
           ++H    + ++HRD+K  NV I A    +LGD GL R F     S TT   ++VGT  Y+
Sbjct: 121 HMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFS----SKTTAAHSLVGTPYYM 173

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVD 558
           +PE       +  +D+++ G LL E+A  + P   D   L  
Sbjct: 174 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS 215

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 75.1 bits (185), Expect = 1e-14
 Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 34/186 (18%)

Query: 364 FKQSEVIGTGGFGEVYKG-------------VLPTRMRE-FAA----EIESLGRLRHKHL 405
           +++   IG G FGEV+K              VL    +E F      EI+ L  L+H+++
Sbjct: 14  YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENV 73

Query: 406 VNLQGWCKRKR--------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAG 457
           VNL   C+ K            LV+++  +  L  LL  N+N   +  +   ++K +  G
Sbjct: 74  VNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLL-SNKNVKFTLSEIKKVMKMLLNG 131

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT---TNVVGTIG 514
           L Y+H      ++HRD+K+ N+LI  D   +L DFGLAR F   K S     TN V T+ 
Sbjct: 132 LYYIHR---NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLW 188

Query: 515 YIAPEL 520
           Y  PEL
Sbjct: 189 YRPPEL 194

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 74.1 bits (182), Expect = 1e-14
 Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 36/206 (17%)

Query: 369 VIGTGGFGEVYKG------------VLPTR-MRE---FAAEIESLGRLRHKHLVNLQGWC 412
           V+G G +G VY               +P R  R       EI     L+H+++V   G  
Sbjct: 15  VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD 74

Query: 413 KRKRDLLLVYDYIPNGSLDSLL-------FDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                  +  + +P GSL +LL        DNE  ++ +       K I  GL YLH   
Sbjct: 75  SENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYT------KQILEGLKYLH--- 125

Query: 466 EQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
           +  ++HRD+K  NVL++      ++ DFG ++    G    T    GT+ Y+APE+   G
Sbjct: 126 DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL-AGINPCTETFTGTLQYMAPEVIDKG 184

Query: 525 KA--SCSTDVFAYGVLLLEIATGRRP 548
                   D+++ G  ++E+ATG+ P
Sbjct: 185 PRGYGAPADIWSLGCTIVEMATGKPP 210

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 75.2 bits (185), Expect = 1e-14
 Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 32/201 (15%)

Query: 370 IGTGGFGEVYKGVLPTRMREFA-----------------AEIESLGRLRHKHLVNLQGWC 412
           IG+G  G VYK +     R +A                  EIE L  + H ++V      
Sbjct: 82  IGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF 141

Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHR 472
               ++ ++ +++  GSL+     +E F+       ++ + I +G+ YLH    + ++HR
Sbjct: 142 DHNGEIQVLLEFMDGGSLEGTHIADEQFLA------DVARQILSGIAYLHR---RHIVHR 192

Query: 473 DVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART----GKAS- 527
           D+K  N+LI++  N ++ DFG++R+     +    + VGTI Y++PE   T    G    
Sbjct: 193 DIKPSNLLINSAKNVKIADFGVSRILAQ-TMDPCNSSVGTIAYMSPERINTDLNHGAYDG 251

Query: 528 CSTDVFAYGVLLLEIATGRRP 548
            + D+++ GV +LE   GR P
Sbjct: 252 YAGDIWSLGVSILEFYLGRFP 272

Length = 353

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 74.1 bits (182), Expect = 2e-14
 Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 58/219 (26%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMR---EFAA------------------EIESLGRLRH 402
           FKQ E +G G +  VYKG    R R   E  A                  EI  +  L+H
Sbjct: 2   FKQLEKLGEGTYATVYKG----RNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH 57

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPN------------GSLDSLLFDNENFVLSWEQRFNI 450
           +++V L      +  L+LV++Y+              G+LD      ++F       + +
Sbjct: 58  ENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTV--KSFT------YQL 109

Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV 510
           +KGIA    + HE     V+HRD+K  N+LI+     +L DFGLAR F    ++  +N V
Sbjct: 110 LKGIA----FCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGI-PVNTFSNEV 161

Query: 511 GTIGYIAPEL---ARTGKASCSTDVFAYGVLLLEIATGR 546
            T+ Y AP++   +RT   S S D+++ G ++ E+ TGR
Sbjct: 162 VTLWYRAPDVLLGSRT--YSTSIDIWSVGCIMAEMITGR 198

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 77.2 bits (190), Expect = 2e-14
 Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 20/178 (11%)

Query: 384 PTRMREFA---AEIESLGRLRHKHLVNL--QGWCKRKRDLLLVYDYIPNGSLDSLLFDNE 438
           P    + A    E     RL H ++V L   G       L  V++Y+P  +L  +L   +
Sbjct: 16  PEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGL-LFAVFEYVPGRTLREVL-AAD 73

Query: 439 NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLA 495
              L   +   ++  +   L   H    Q ++HRD+K  N+++       +A++ DFG+ 
Sbjct: 74  G-ALPAGETGRLMLQVLDALACAHN---QGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIG 129

Query: 496 RLF------DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRR 547
            L       D   ++ TT V+GT  Y APE  R    + ++D++A+G++ LE  TG+R
Sbjct: 130 TLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQR 187

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 73.1 bits (179), Expect = 2e-14
 Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 32/211 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA---------------------EIESLGRLRH 402
           ++  +++G G FGEVY        RE A                      EI+ L  LRH
Sbjct: 4   WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRH 63

Query: 403 KHLVNLQGWCKR---KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
             +V   G C R   ++ L +  +Y+P GS+   L        +  +R+   + I  G+ 
Sbjct: 64  DRIVQYYG-CLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYT--RQILQGVS 120

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT--TNVVGTIGYIA 517
           YLH     +++HRD+K  N+L D+  N +LGDFG ++      +S T   +V GT  +++
Sbjct: 121 YLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMS 177

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           PE+          DV++    ++E+ T + P
Sbjct: 178 PEVISGEGYGRKADVWSVACTVVEMLTEKPP 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 73.5 bits (180), Expect = 3e-14
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 43/213 (20%)

Query: 368 EVIGTGGFGEVYKGVL---------PTRM----------REFAAEIESLGRL-RHKHLVN 407
           +VIG G FG+V + ++           +M          R+FA E+E L +L  H +++N
Sbjct: 8   DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIIN 67

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLL-----------FDNEN---FVLSWEQRFNIIKG 453
           L G C+ +  L +  +Y P G+L   L           F  E+     L+ +Q       
Sbjct: 68  LLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASD 127

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG-- 511
           +A G+ YL E   +  IHRD+ + NVL+  ++ +++ DFGL+R    G+  +    +G  
Sbjct: 128 VATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSR----GEEVYVKKTMGRL 180

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
            + ++A E       +  +DV+++GVLL EI +
Sbjct: 181 PVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 72.8 bits (178), Expect = 3e-14
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 32/211 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA---------------------EIESLGRLRH 402
           +++ +++G G FG VY        RE AA                     EI+ L  L+H
Sbjct: 4   WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQH 63

Query: 403 KHLVNLQGWCKR---KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
           + +V   G C R   ++ L +  +Y+P GS+   L        S  +++   + I  G+ 
Sbjct: 64  ERIVQYYG-CLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYT--RQILEGMS 120

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT--TNVVGTIGYIA 517
           YLH     +++HRD+K  N+L D+  N +LGDFG ++      +S T   +V GT  +++
Sbjct: 121 YLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMS 177

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           PE+          DV++ G  ++E+ T + P
Sbjct: 178 PEVISGEGYGRKADVWSLGCTVVEMLTEKPP 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 72.8 bits (179), Expect = 4e-14
 Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 56/221 (25%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           + + E IG G +G VYK                      GV  T +RE    I  L  L+
Sbjct: 2   YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIRE----ISLLKELQ 57

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYI------------PNGSLDSLLFDNENFVLSWEQRFN 449
           H ++V LQ    ++  L L+++++                +D+ L      V S+     
Sbjct: 58  HPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAEL------VKSY----- 106

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
            +  I  G+L+ H    + V+HRD+K  N+LID     +L DFGLAR F      +T  V
Sbjct: 107 -LYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEV 162

Query: 510 VGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGRRPI 549
           V T+ Y APE L  + + S   D+++ G +  E+AT ++P+
Sbjct: 163 V-TLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMAT-KKPL 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 72.7 bits (178), Expect = 4e-14
 Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 24/204 (11%)

Query: 364 FKQSEVIGTGGFGEV-----------------YKGVLPTRMREFAA--EIESLGRLRHKH 404
           F+Q  V+G GGFGEV                  K  +  R  E  A  E + L ++  + 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +V+L    + K  L LV   +  G L   ++          +       I  GL  LH+E
Sbjct: 62  VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE 121

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +++RD+K  N+L+D   + R+ D GLA     G+       VGT+GY+APE+ +  
Sbjct: 122 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNE 176

Query: 525 KASCSTDVFAYGVLLLEIATGRRP 548
           + + S D +A G LL E+  G+ P
Sbjct: 177 RYTFSPDWWALGCLLYEMIAGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 72.3 bits (177), Expect = 5e-14
 Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 21/232 (9%)

Query: 385 TRMREFAAEIES--LGRLRHKHLVNL-QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           +R    AAE E+  L +L+H ++V   + W      L +V  +   G L   L + +  +
Sbjct: 39  SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKL 98

Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG 501
           L   Q       IA  L YLHE+    ++HRD+K+ NV +      ++GD G+AR+ ++ 
Sbjct: 99  LPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN- 154

Query: 502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWV 560
           +    + ++GT  Y++PEL      +  +DV+A G  + E+AT +   ++ D   LV  +
Sbjct: 155 QCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRI 214

Query: 561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
           +E + L  +     P LG   ++A M        L   ++ E RP+++ +LR
Sbjct: 215 IEGK-LPPMPKDYSPELGE--LIATM--------LS--KRPEKRPSVKSILR 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 72.9 bits (179), Expect = 5e-14
 Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 50/218 (22%)

Query: 370 IGTGGFGEVYK----GVLPTR------------------MREFAAEIESLGRLRHKHLVN 407
           IG G FG V++    G+LP                      +F  E   +    H ++V 
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV--------------------LSWEQR 447
           L G C   + + L+++Y+  G L+  L                           LS  ++
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132

Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR---LFDHGKIS 504
             I K +AAG+ YL E   +  +HRD+ + N L+  +M  ++ DFGL+R     D+ K S
Sbjct: 133 LCIAKQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAS 189

Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
              N    I ++ PE     + +  +DV+AYGV+L EI
Sbjct: 190 E--NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 72.2 bits (177), Expect = 5e-14
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 24/207 (11%)

Query: 364 FKQSEVIGTGGFGEVY--------KGVL--------PTRMREFAA--EIESLGRLRHKHL 405
           +++  V+G G FG V+        K V+         T+    AA  E + L  L H ++
Sbjct: 2   YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI 61

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +         + L++V +Y P G+L   +    N +L  +    I+      LL LH   
Sbjct: 62  IEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDT---ILHFFVQILLALHHVH 118

Query: 466 EQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
            ++++HRD+K+ N+L+D   M  ++GDFG++++      S    VVGT  YI+PEL    
Sbjct: 119 TKLILHRDLKTQNILLDKHKMVVKIGDFGISKIL--SSKSKAYTVVGTPCYISPELCEGK 176

Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDS 551
             +  +D++A G +L E+A+ +R  ++
Sbjct: 177 PYNQKSDIWALGCVLYELASLKRAFEA 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 72.7 bits (178), Expect = 5e-14
 Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 28/222 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGV---------LPTRMR------------EFAAEIESLGRLRH 402
            ++ +++G+G FG V+KG+         +P  ++            E    + ++G L H
Sbjct: 9   LRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDH 68

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V L G C     L LV    P GSL   +  + +  L  ++  N    IA G+ YL 
Sbjct: 69  AYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRD-SLDPQRLLNWCVQIAKGMYYLE 126

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT-IGYIAPELA 521
           E     ++HR++ + N+L+ +D   ++ DFG+A L       +  +   T I ++A E  
Sbjct: 127 E---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESI 183

Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLE 562
             G+ +  +DV++YGV + E+ + G  P        V  +LE
Sbjct: 184 LFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE 225

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 72.1 bits (177), Expect = 6e-14
 Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 57/278 (20%)

Query: 368 EVIGTGGFGEVYKG-VLPTRMREFAAEIESLGR-------------------LRHKHLVN 407
            VIG G FG VY G ++ +  ++    ++SL R                     H ++++
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60

Query: 408 LQGWCKRKRDL-LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG-------IAAGLL 459
           L G C       L+V  Y+ +G L        NF+ S E     +K        +A G+ 
Sbjct: 61  LLGICLPSEGSPLVVLPYMKHGDL-------RNFIRS-ETHNPTVKDLIGFGLQVAKGME 112

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYI 516
           YL     +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++
Sbjct: 113 YLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWM 169

Query: 517 APELARTGKASCSTDVFAYGVLLLEIAT-GRRPI-DSDHFILVDWVLEFQHLGQVLDVVD 574
           A E  +T K +  +DV+++GVLL E+ T G  P  D D F +  ++L+ + L Q     D
Sbjct: 170 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPD 229

Query: 575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
           P             + ++ L C H K E RPT  +++ 
Sbjct: 230 P-------------LYEVMLSCWHPKPEMRPTFSELVS 254

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 71.4 bits (175), Expect = 9e-14
 Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 38/213 (17%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA---------------------EIESLGRLRH 402
           +++ +++G G FG VY        RE A                      EI+ L  L+H
Sbjct: 4   WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH 63

Query: 403 KHLVNLQGWCKRKRDLLLVY-DYIPNGSLDSLLFD----NENFVLSWEQRFNIIKGIAAG 457
           + +V   G C R  + L ++ +Y+P GS+   L       E     + ++      I  G
Sbjct: 64  ERIVQYYG-CLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQ------ILEG 116

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD--HGKISHTTNVVGTIGY 515
           + YLH     +++HRD+K  N+L D+  N +LGDFG ++         +   +V GT  +
Sbjct: 117 VEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYW 173

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           ++PE+          DV++ G  ++E+ T + P
Sbjct: 174 MSPEVISGEGYGRKADVWSVGCTVVEMLTEKPP 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 55/220 (25%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           +++ E IG G +G VYK                      GV  T +RE    I  L  L 
Sbjct: 1   YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIRE----ISLLKELN 56

Query: 402 HKHLVNLQGWCKRKRDLLLVYDY-----------IPNGSLDSLLFDNENFVLSWEQRFNI 450
           H ++V L      +  L LV+++            P   LD  L   ++++      + +
Sbjct: 57  HPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLI--KSYL------YQL 108

Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV 510
           ++GIA    Y H      V+HRD+K  N+LID +   +L DFGLAR F     ++T  VV
Sbjct: 109 LQGIA----YCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVV 161

Query: 511 GTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPI 549
            T+ Y APE+    +  S   D+++ G +  E+   RRP+
Sbjct: 162 -TLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVN-RRPL 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 71.6 bits (175), Expect = 1e-13
 Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 9/151 (5%)

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG-IAAGLLYLHE 463
           LV L    +    L L+ DYI  G L + L   E F    EQ   I  G I   L +LH+
Sbjct: 67  LVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFK---EQEVQIYSGEIVLALEHLHK 123

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
                +I+RD+K  N+L+D++ +  L DFGL++ F   ++    +  GTI Y+AP++ R 
Sbjct: 124 ---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRG 180

Query: 524 GKASC--STDVFAYGVLLLEIATGRRPIDSD 552
           G      + D ++ GVL+ E+ TG  P   D
Sbjct: 181 GDGGHDKAVDWWSMGVLMYELLTGASPFTVD 211

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 48/253 (18%)

Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV------- 441
           +F  E++ L RL   ++  L G C     L ++ +Y+ NG L+  L  +           
Sbjct: 65  DFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNS 124

Query: 442 --LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LF 498
             LS+     +   IA+G+ YL        +HRD+ + N L+  +   ++ DFG++R L+
Sbjct: 125 KSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLY 181

Query: 499 --DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI 555
             D+ ++         I ++A E    GK +  +DV+A+GV L EI T  R         
Sbjct: 182 SSDYYRVQ--GRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQ------- 232

Query: 556 LVDWVLEFQHLG--QVLDVVDPNLGSSYVVAEMELVLQ-----------LGLLCSHQKAE 602
                  ++HL   QV++    N G  +     ++ L            L L C  +  E
Sbjct: 233 ------PYEHLTDQQVIE----NAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEE 282

Query: 603 ARPTMRQVLRYLN 615
            RPT R++  +L 
Sbjct: 283 DRPTFREIHLFLQ 295

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 71.6 bits (175), Expect = 1e-13
 Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 26/200 (13%)

Query: 370 IGTGGFGEVYKG------------VLPTR----MREFAAEIESLGRLRHKHLVNLQGWCK 413
           +G G FG+VYK             V+ T+    + ++  EIE L    H ++V L G   
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
               L ++ ++ P G++D+++ + +   L+  Q   I + +   L YLH      +IHRD
Sbjct: 80  WDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVICRQMLEALQYLHS---MKIIHRD 135

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE--LARTGKAS---C 528
           +K+GNVL+  D + +L DFG++   +   +    + +GT  ++APE  +  T K +    
Sbjct: 136 LKAGNVLLTLDGDIKLADFGVSAK-NVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDY 194

Query: 529 STDVFAYGVLLLEIATGRRP 548
             D+++ G+ L+E+A    P
Sbjct: 195 KADIWSLGITLIEMAQIEPP 214

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 71.4 bits (175), Expect = 2e-13
 Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 40/217 (18%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           F++ E IG G +G VYK                      GV  T +RE    I  L  L 
Sbjct: 2   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELN 57

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNG---SLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           H ++V L      +  L LV++++       +D+         L     F +++G+A   
Sbjct: 58  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLA--- 114

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y AP
Sbjct: 115 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 169

Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSD 552
           E+    K  S + D+++ G +  E+ T R   P DS+
Sbjct: 170 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 71.6 bits (176), Expect = 2e-13
 Identities = 63/201 (31%), Positives = 88/201 (43%), Gaps = 33/201 (16%)

Query: 370 IGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLRHKHLVNL-- 408
           IG G +G VY+    T   E  A                   EI  L  LRH ++V L  
Sbjct: 15  IGEGTYGIVYRA-RDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKE 73

Query: 409 --QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
              G  K    + LV +Y     L SLL DN     S  Q   ++  +  GL YLHE + 
Sbjct: 74  VVVG--KHLDSIFLVMEYCEQ-DLASLL-DNMPTPFSESQVKCLMLQLLRGLQYLHENF- 128

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTGK 525
             +IHRD+K  N+L+      ++ DFGLAR +       T  VV T+ Y APE L     
Sbjct: 129 --IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVV-TLWYRAPELLLGCTT 185

Query: 526 ASCSTDVFAYGVLLLEIATGR 546
            + + D++A G +L E+   +
Sbjct: 186 YTTAIDMWAVGCILAELLAHK 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 70.9 bits (173), Expect = 2e-13
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 43/213 (20%)

Query: 368 EVIGTGGFGEVYKGVL---------PTRM----------REFAAEIESLGRL-RHKHLVN 407
           +VIG G FG+V K  +           +           R+FA E+E L +L  H +++N
Sbjct: 1   DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 60

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLL-----------FDNEN---FVLSWEQRFNIIKG 453
           L G C+ +  L L  +Y P+G+L   L           F   N     LS +Q  +    
Sbjct: 61  LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG-- 511
           +A G+ YL +   +  IHRD+ + N+L+  +  A++ DFGL+R    G+  +    +G  
Sbjct: 121 VARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRL 173

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
            + ++A E       + ++DV++YGVLL EI +
Sbjct: 174 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 70.9 bits (174), Expect = 2e-13
 Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 22/179 (12%)

Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRD--LLLVYDYIPNGSLDSLLFDNENFV 441
           P   ++   E+E     +  ++V   G    +    + +  +Y   GSLDS+       V
Sbjct: 40  PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKK----V 95

Query: 442 LSWEQRFN------IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA 495
                R        I + +  GL YLH    + +IHRD+K  N+L+      +L DFG++
Sbjct: 96  KKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVS 152

Query: 496 RLFDHGKI--SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
                G++  S      GT  Y+APE  +    S ++DV++ G+ LLE+A  R P   +
Sbjct: 153 -----GELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 26/206 (12%)

Query: 363 GFKQSEVIGTGGFGEVYK-----------------GVLPTRMREFAA-EIESLGRLRHKH 404
            FK  + +G G +G VYK                 G +  + RE A  EI  L  + H +
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF--VLSWEQRFNIIKGIAAGLLYLH 462
           +++ +        L +V +Y P G L   +   +    ++  ++ + I   +  GL  LH
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
           E   Q ++HRD+KS N+L+ A+   ++GD G++++    K +     +GT  Y+APE+ +
Sbjct: 121 E---QKILHRDLKSANILLVANDLVKIGDLGISKVL---KKNMAKTQIGTPHYMAPEVWK 174

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP 548
               S  +D+++ G LL E+AT   P
Sbjct: 175 GRPYSYKSDIWSLGCLLYEMATFAPP 200

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 70.6 bits (173), Expect = 3e-13
 Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 41/218 (18%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           +++ E IG G +G VYK                      GV  T +RE    I  L  ++
Sbjct: 4   YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIRE----ISLLKEMQ 59

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIP---NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           H ++V LQ     ++ L LV++Y+       +DS     +N  L     + I++GIA   
Sbjct: 60  HGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIA--- 116

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            Y H      V+HRD+K  N+LID   NA +L DFGLAR F     + T  VV T+ Y A
Sbjct: 117 -YCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVV-TLWYRA 171

Query: 518 PELARTGKA-SCSTDVFAYGVLLLEIATGRR--PIDSD 552
           PE+    +  S   D+++ G +  E+   +   P DS+
Sbjct: 172 PEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE 209

Length = 294

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 69.9 bits (171), Expect = 3e-13
 Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 22/193 (11%)

Query: 370 IGTGGFGE-------------VYKGVLPTRMR-----EFAAEIESLGRLRHKHLVNLQGW 411
           IG G FG+             V K +  ++M      E   E+  L  ++H ++V  Q  
Sbjct: 8   IGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQES 67

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH 471
            +   +L +V DY   G L   +      +   +Q  +    I   L ++H+   + ++H
Sbjct: 68  FEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILH 124

Query: 472 RDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTD 531
           RD+KS N+ +  D   +LGDFG+AR+  +  +      +GT  Y++PE+      +  +D
Sbjct: 125 RDIKSQNIFLTKDGTIKLGDFGIARVL-NSTVELARTCIGTPYYLSPEICENRPYNNKSD 183

Query: 532 VFAYGVLLLEIAT 544
           ++A G +L E+ T
Sbjct: 184 IWALGCVLYEMCT 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 70.4 bits (172), Expect = 3e-13
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 26/200 (13%)

Query: 370 IGTGGFGEVYKG------------VLPTR----MREFAAEIESLGRLRHKHLVNLQGWCK 413
           +G G FG+VYK             V+ T+    + ++  EI+ L    H ++V L     
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
            + +L ++ ++   G++D+++ + E   L+  Q   + K     L YLHE     +IHRD
Sbjct: 73  YENNLWILIEFCAGGAVDAVMLELER-PLTEPQIRVVCKQTLEALNYLHE---NKIIHRD 128

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE--LARTGKA---SC 528
           +K+GN+L   D + +L DFG++   +   I    + +GT  ++APE  +  T K      
Sbjct: 129 LKAGNILFTLDGDIKLADFGVSAK-NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 187

Query: 529 STDVFAYGVLLLEIATGRRP 548
             DV++ G+ L+E+A    P
Sbjct: 188 KADVWSLGITLIEMAQIEPP 207

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 70.8 bits (174), Expect = 4e-13
 Identities = 66/231 (28%), Positives = 91/231 (39%), Gaps = 52/231 (22%)

Query: 369 VIGTGGFGEVY-------KGVLPT-RMRE-----------FAAEIESLGRLRHKHLVNLQ 409
           VIG G FGEV+         V     +R+             AE + L       +V L 
Sbjct: 8   VIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLY 67

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
              + +  L LV +Y+P G L +LL   + F      RF I + + A    L    +   
Sbjct: 68  YSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEET-ARFYIAELVLA----LDSVHKLGF 122

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLA------------------RLFDHGKISHTTN--- 508
           IHRD+K  N+LIDAD + +L DFGL                    LF    +    +   
Sbjct: 123 IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQ 182

Query: 509 -------VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
                   VGT  YIAPE+ R        D ++ GV+L E+  G  P  SD
Sbjct: 183 RRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 69.9 bits (171), Expect = 4e-13
 Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 48/279 (17%)

Query: 370 IGTGGFGEVYKGVLPTRMR-------------------EFAAEIESLGRLRHKHLVNLQG 410
           IG G FG+V  G     M                     F  E++    L H +++   G
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK---GIAAGLLYLHEEWEQ 467
            C      LLV ++ P G L + L  N   V    Q+  + +    +A+GLL+LH+    
Sbjct: 63  QCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---A 119

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLA--RLFDHGKISHTTNVVGTIGYIAPELA---- 521
             IH D+   N  + AD++ ++GD+GLA  +  +   I+   + V  + ++APEL     
Sbjct: 120 DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAV-PLRWLAPELVEIRG 178

Query: 522 ---RTGKASCSTDVFAYGVLLLEIAT-GRRPID--SDHFILVDWVLEFQHLGQVLDVVDP 575
                   +  +++++ GV + E+ T   +P    SD  +L   V E     Q + +  P
Sbjct: 179 QDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE-----QDIKLPKP 233

Query: 576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            L   Y     E V+Q   L      E RPT  +V   L
Sbjct: 234 QLDLKYSDRWYE-VMQFCWLDP----ETRPTAEEVHELL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 69.4 bits (170), Expect = 5e-13
 Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 25/196 (12%)

Query: 367 SEVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHLV 406
              IG G FG+VY+GV                     P+   +F  E   + +  H H+V
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G    +  + +V +  P G L S L  N+   L           ++  L YL     
Sbjct: 71  KLIGVIT-ENPVWIVMELAPLGELRSYLQVNKYS-LDLASLILYSYQLSTALAYLES--- 125

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
           +  +HRD+ + NVL+ +    +LGDFGL+R  +       +     I ++APE     + 
Sbjct: 126 KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRF 185

Query: 527 SCSTDVFAYGVLLLEI 542
           + ++DV+ +GV + EI
Sbjct: 186 TSASDVWMFGVCMWEI 201

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 70.2 bits (172), Expect = 5e-13
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 8/99 (8%)

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR--LFDHGKISHTTNVVG 511
           IA GL +LH    + +I+RD+K  NV++DA+ + ++ DFG+ +  +F  GK + T    G
Sbjct: 110 IAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG-GKTTRT--FCG 163

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID 550
           T  YIAPE+        S D +A+GVLL E+  G+ P D
Sbjct: 164 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 202

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 69.6 bits (170), Expect = 6e-13
 Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 8/156 (5%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
           EIE L  L H+++V  +G C       + L+ +++P+GSL   L  N+N + + +Q+   
Sbjct: 56  EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKI-NLKQQLKY 114

Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT--N 508
              I  G+ YL     +  +HRD+ + NVL++++   ++GDFGL +  +  K  +T   +
Sbjct: 115 AVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDD 171

Query: 509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           +   + + APE     K   ++DV+++GV L E+ T
Sbjct: 172 LDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 69.2 bits (170), Expect = 6e-13
 Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 37/214 (17%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           +++   IG G +G VYK                      G+  + +RE A  ++ L    
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIAL-LKQLESFE 59

Query: 402 HKHLVNLQGWC-----KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA 456
           H ++V L   C      R+  L LV++++ +  L + L       L  E   ++++ +  
Sbjct: 60  HPNIVRLLDVCHGPRTDRELKLTLVFEHV-DQDLATYLSKCPKPGLPPETIKDLMRQLLR 118

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
           G+ +LH      ++HRD+K  N+L+ +D   ++ DFGLAR++        T+VV T+ Y 
Sbjct: 119 GVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE--MALTSVVVTLWYR 173

Query: 517 APE-LARTGKASCSTDVFAYGVLLLEIATGRRPI 549
           APE L ++  A+   D+++ G +  E+   RRP+
Sbjct: 174 APEVLLQSSYAT-PVDMWSVGCIFAELFR-RRPL 205

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 69.1 bits (169), Expect = 7e-13
 Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 40/215 (18%)

Query: 370 IGTGGFGEVYKGVL---------PTRM--------------REFAAEIESLGRLRHKHLV 406
           +G+G FGEVY+G           P R+              +EF  E   +    H ++V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENF---VLSWEQRFNIIKGIAAGLLYL 461
            L G C       ++ + +  G L S L D   E F   +L+ ++  +I   +A G +YL
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122

Query: 462 HEEWEQV-VIHRDVKSGNVLI-----DADMNARLGDFGLAR-LFDHGKISHTTNVVGTIG 514
               EQ+  IHRD+ + N L+     DAD   ++GDFGLAR ++           +  + 
Sbjct: 123 ----EQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVR 178

Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           ++APE    GK +  +DV+++GVL+ EI T G++P
Sbjct: 179 WMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 69.4 bits (170), Expect = 7e-13
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 30/205 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA--------------------EIESLGRLRHK 403
            ++ + +GTG FG V+  V       + A                    E   L  + H 
Sbjct: 3   LERIKTVGTGTFGRVHL-VRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHP 61

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
            ++ L      +R L ++ +Y+P G L S L ++  F  S    F   + I   L YLH 
Sbjct: 62  FIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNS-TGLFYASE-IVCALEYLHS 119

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
              + +++RD+K  N+L+D + + +L DFG A+         T  + GT  Y+APE+ ++
Sbjct: 120 ---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKL----RDRTWTLCGTPEYLAPEVIQS 172

Query: 524 GKASCSTDVFAYGVLLLEIATGRRP 548
              + + D +A G+L+ E+  G  P
Sbjct: 173 KGHNKAVDWWALGILIYEMLVGYPP 197

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 69.7 bits (171), Expect = 8e-13
 Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 40/216 (18%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQ--GWCKRKRDLL 419
           K F+    +G GG+G+V+      + ++   EI +L R++   L  L        +RD+L
Sbjct: 1   KDFQILTQVGQGGYGQVFLA----KKKD-TGEIVALKRMKKSLLFKLNEVRHVLTERDIL 55

Query: 420 ----------LVY------------DYIPNGSLDSLLFDNENFVLSWEQ-RFNIIKGIAA 456
                     L+Y            +Y+P G   +LL  N   VLS +  RF + +   A
Sbjct: 56  TTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLL--NNLGVLSEDHARFYMAEMFEA 113

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
            +  LHE      IHRD+K  N LIDA  + +L DFGL++    G +++  +VVG+  Y+
Sbjct: 114 -VDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSK----GIVTYANSVVGSPDYM 165

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           APE+ R      + D ++ G +L E   G  P    
Sbjct: 166 APEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS 201

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 69.3 bits (170), Expect = 8e-13
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +H  L  L    + K  L  V +Y+  G L   +  +  F      RF   + I  GL +
Sbjct: 54  KHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEP-RARFYAAE-IVLGLQF 111

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR--LFDHGKISHTTNVVGTIGYIAP 518
           LHE   + +I+RD+K  NVL+D++ + ++ DFG+ +  +        T+   GT  YIAP
Sbjct: 112 LHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT---TSTFCGTPDYIAP 165

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           E+        + D +A GVLL E+  G+ P + D
Sbjct: 166 EILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD 199

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 68.9 bits (168), Expect = 8e-13
 Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 44/214 (20%)

Query: 368 EVIGTGGFGEVYKGVL-------PTRM---------------REFAAEIESLGRLRHKHL 405
           E +G   FG+VYKG L        T+                 EF  E     RL+H ++
Sbjct: 11  EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNI 70

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLF-----------DNENFV---LSWEQRFNII 451
           V L G   +++ L +++ Y  +  L   L            D++  V   L      +I+
Sbjct: 71  VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV 130

Query: 452 KGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF---DHGKISHTTN 508
             IAAG+ +L       V+H+D+ + NVL+   +N ++ D GL R     D+ K+    N
Sbjct: 131 TQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKL--MGN 185

Query: 509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
            +  I +++PE    GK S  +D+++YGV+L E+
Sbjct: 186 SLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEV 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 70.3 bits (172), Expect = 1e-12
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 11/99 (11%)

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF------DHGKISHTTNVVG 511
           LL +H    + +IHRD+KS N+L+ ++   +LGDFG ++++      D G+        G
Sbjct: 153 LLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGR-----TFCG 207

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID 550
           T  Y+APE+ R    S   D+F+ GVLL E+ T +RP D
Sbjct: 208 TPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD 246

Length = 496

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 68.3 bits (167), Expect = 1e-12
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 24/204 (11%)

Query: 364 FKQSEVIGTGGFGEV-------------YKGVLPTRMREFAAEIESLG------RLRHKH 404
           F+   V+G GGFGEV              K +   R+++   E  +L       ++  + 
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 61

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +V+L    + K  L LV   +  G L   +++  N     E+       I  GL  LH E
Sbjct: 62  VVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE 121

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +++RD+K  N+L+D   + R+ D GLA     G+       VGT+GY+APE+ +  
Sbjct: 122 ---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET--IRGRVGTVGYMAPEVVKNE 176

Query: 525 KASCSTDVFAYGVLLLEIATGRRP 548
           + + S D +  G L+ E+  G+ P
Sbjct: 177 RYTFSPDWWGLGCLIYEMIEGKSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 36/269 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFA--------------AEIESLGRLRHKH 404
           F+  + IG G F EVY+       +P  +++                 EI+ L +L H +
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLH 462
           ++          +L +V +    G L  ++  F  +  ++  +  +     + + L ++H
Sbjct: 64  VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH 123

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
               + V+HRD+K  NV I A    +LGD GL R F   K +   ++VGT  Y++PE   
Sbjct: 124 S---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERIH 179

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD-PNLGSSY 581
               +  +D+++ G LL E+A  + P   D        +    L + ++  D P L S +
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-------MNLYSLCKKIEQCDYPPLPSDH 232

Query: 582 VVAEMELVLQLGLLCSHQKAEARPTMRQV 610
              E+    QL  +C +   E RP +  V
Sbjct: 233 YSEELR---QLVNMCINPDPEKRPDITYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 68.2 bits (166), Expect = 2e-12
 Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 31/217 (14%)

Query: 364 FKQSEVIGTGGFGEVYKG---------------VLPTRMREFAAEIESLGRL-RHKHLVN 407
           F+  E++G G +G+VYKG               V      E   EI  L +   H+++  
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67

Query: 408 LQGWCKRKR------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
             G   +K        L LV ++   GS+  L+ + +   L  E    I + I  GL +L
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H+     VIHRD+K  NVL+  +   +L DFG++   D   +      +GT  ++APE+ 
Sbjct: 128 HQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-TVGRRNTFIGTPYWMAPEVI 183

Query: 522 RTGKASCST-----DVFAYGVLLLEIATGRRPIDSDH 553
              +   +T     D+++ G+  +E+A G  P+   H
Sbjct: 184 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 220

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 67.8 bits (165), Expect = 2e-12
 Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 30/210 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA---------------------EIESLGRLRH 402
           ++  +++G G FG VY        RE A                      EI+ L  L H
Sbjct: 4   WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH 63

Query: 403 KHLVNLQGWCK--RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           + +V   G  +   +R L +  +++P GS+   L        +  +++   + I  G+ Y
Sbjct: 64  ERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYT--RQILEGVSY 121

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT--TNVVGTIGYIAP 518
           LH     +++HRD+K  N+L D+  N +LGDFG ++      +S T   +V GT  +++P
Sbjct: 122 LHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSP 178

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           E+          D+++ G  ++E+ T + P
Sbjct: 179 EVISGEGYGRKADIWSVGCTVVEMLTEKPP 208

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L +++H ++V  +   +    L +V +Y   G L   +      +   +        +  
Sbjct: 52  LAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCL 111

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
           G+ ++HE   + V+HRD+KS N+ +  +   +LGDFG ARL      ++    VGT  Y+
Sbjct: 112 GVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS-PGAYACTYVGTPYYV 167

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD---HFIL 556
            PE+      +  +D+++ G +L E+ T + P  ++   + IL
Sbjct: 168 PPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLIL 210

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 17/133 (12%)

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTN 508
           I   I   L YLH +    VIHRDVK  NVLI+ +   +L DFG++  L D   ++ T +
Sbjct: 108 IAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD--SVAKTID 163

Query: 509 VVGTIGYIAPEL---ARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ 564
             G   Y+APE        K     +DV++ G+ ++E+ATGR P DS       W   FQ
Sbjct: 164 -AGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS-------WKTPFQ 215

Query: 565 HLGQVLDVVDPNL 577
            L QV++   P L
Sbjct: 216 QLKQVVEEPSPQL 228

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 68.2 bits (167), Expect = 2e-12
 Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 58/289 (20%)

Query: 368 EVIGTGGFGEVYKG------------VLPTRM-------REFA---AEIESLGRL-RHKH 404
           + +G G FG+V K              +  +M       ++ +   +E+E +  + +HK+
Sbjct: 18  KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 77

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN------ENFVLSWEQRFNIIK------ 452
           ++NL G C ++  L +V +Y  +G+L   L          +          + +      
Sbjct: 78  IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSF 137

Query: 453 --GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH---TT 507
              +A G+ +L     +  IHRD+ + NVL+  D   ++ DFGLAR  D   I +   TT
Sbjct: 138 AYQVARGMEFLAS---KKCIHRDLAARNVLVTEDHVMKIADFGLAR--DIHHIDYYRKTT 192

Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
           N    + ++APE       +  +DV+++GVLL EI T G  P      I V+ + +    
Sbjct: 193 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG---IPVEELFKLLKE 249

Query: 567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           G  ++   P   +  +   M         C H+    RPT +Q++  L+
Sbjct: 250 GYRME--KPQNCTQELYHLM-------RDCWHEVPSQRPTFKQLVEDLD 289

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 31/217 (14%)

Query: 364 FKQSEVIGTGGFGEVYKG---------------VLPTRMREFAAEIESLGRL-RHKHLVN 407
           F+  EV+G G +G+VYKG               V      E   EI  L +   H+++  
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIAT 77

Query: 408 LQGWCKRKR------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
             G   +K        L LV ++   GS+  L+ + +   L  +    I + I  GL +L
Sbjct: 78  YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL 137

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H      VIHRD+K  NVL+  +   +L DFG++   D   +      +GT  ++APE+ 
Sbjct: 138 HA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-TVGRRNTFIGTPYWMAPEVI 193

Query: 522 RTGKASCST-----DVFAYGVLLLEIATGRRPIDSDH 553
              +   +T     D+++ G+  +E+A G  P+   H
Sbjct: 194 ACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 30/217 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI----ESLGR-----LRHKHLVNLQGWCK- 413
           F+  +VIG G FGEV    +    R +A +I    E L R      R +  V + G C+ 
Sbjct: 3   FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQW 62

Query: 414 ---------RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
                     +  L LV DY   G L +LL   E+ +     RF I    A  +L +H  
Sbjct: 63  ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYI----AEMVLAIHSI 118

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFG-LARLFDHGKISHTTNVVGTIGYIAPELART 523
            +   +HRD+K  NVL+D + + RL DFG   ++   G +  +   VGT  YI+PE+ + 
Sbjct: 119 HQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSV-AVGTPDYISPEILQA 177

Query: 524 -----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
                GK     D ++ GV + E+  G  P  ++  +
Sbjct: 178 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 214

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 67.6 bits (166), Expect = 3e-12
 Identities = 46/164 (28%), Positives = 86/164 (52%), Gaps = 23/164 (14%)

Query: 393 EIESLGRLRHKHLVNLQ----GWCKRKRDLLLVYDYIPNGSLDSLLFDN-ENFVLSWEQR 447
           EI  L +L+H ++V ++    G       + +V +Y+ +  L SL+    + F+ S  + 
Sbjct: 54  EINILLKLQHPNIVTVKEVVVG--SNLDKIYMVMEYVEH-DLKSLMETMKQPFLQS--EV 108

Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR----LGDFGLARLFDHGKI 503
             ++  + +G+ +LH+ W   ++HRD+K+ N+L    +N R    + DFGLAR +     
Sbjct: 109 KCLMLQLLSGVAHLHDNW---ILHRDLKTSNLL----LNNRGILKICDFGLAREYGSPLK 161

Query: 504 SHTTNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
            +T  VV T+ Y APE L    + S + D+++ G +  E+ T +
Sbjct: 162 PYTQLVV-TLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 67.7 bits (165), Expect = 3e-12
 Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 42/213 (19%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR----------------------LRHKHL 405
           +V+G G FG+V    L  +   FA  +++L +                        +  L
Sbjct: 1   KVLGKGSFGKVLLAELKGKGEYFA--VKALKKDVVLIDDDVECTMVEKRVLALAWENPFL 58

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAGLL 459
            +L    + K  L  V +++  G L         F +  + RF++ +       I  GL 
Sbjct: 59  THLYCTFQTKEHLFFVMEFLNGGDL--------MFHIQDKGRFDLYRATFYAAEIVCGLQ 110

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           +LH +    +I+RD+K  NV++D D + ++ DFG+ +    G  +  +   GT  YIAPE
Sbjct: 111 FLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRASTFCGTPDYIAPE 166

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           + +  K + S D +++GVLL E+  G+ P   D
Sbjct: 167 ILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 66/281 (23%), Positives = 108/281 (38%), Gaps = 51/281 (18%)

Query: 369 VIGTGGFGEVYKGV----------LPTRMR------------EFAAEIESLGRLRHKHLV 406
            +G G FGEVY+G+          L   ++            +F  E   + +  H+++V
Sbjct: 13  ALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIV 72

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNEN-----FVLSWEQRFNIIKGIAAGLLYL 461
            L G    +    ++ + +  G L S L +N         L+ +      + +A G  YL
Sbjct: 73  RLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132

Query: 462 HEEWEQVVIHRDVKSGNVLID---ADMNARLGDFGLARLF---DHGKISHTTNVVGTIGY 515
            E      IHRD+ + N L+        A++ DFG+AR      + +      +   I +
Sbjct: 133 EENH---FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAML--PIKW 187

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD 574
           + PE    G  +  TDV+++GVLL EI + G  P           V+EF   G  LD   
Sbjct: 188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT---NQEVMEFVTGGGRLDPPK 244

Query: 575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
              G  Y         ++   C     E RP    +L  + 
Sbjct: 245 GCPGPVY---------RIMTDCWQHTPEDRPNFATILERIQ 276

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 68.3 bits (167), Expect = 4e-12
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 7/158 (4%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI+ L  + H+ ++NL    + K  + +V   +P    D   + + +  L  EQ   I +
Sbjct: 136 EIDILKTISHRAIINLIHAYRWKSTVCMV---MPKYKCDLFTYVDRSGPLPLEQAITIQR 192

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVG 511
            +   L YLH    + +IHRDVK+ N+ +D   NA LGDFG A +L  H          G
Sbjct: 193 RLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSG 249

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
           T+   +PEL         TD+++ G++L E++     +
Sbjct: 250 TLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287

Length = 392

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 67.5 bits (165), Expect = 4e-12
 Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 29/216 (13%)

Query: 362 KGFKQSEVIGTGGFGEVY-----------------KGVLPTR--MREFAAEIESLGRLRH 402
           K F    ++G G FGEV                  K VL  +  +  F  E + L     
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS 60

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
             +  LQ   + K +L LV +Y P G L SLL   E+       +F + + + A    +H
Sbjct: 61  PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLA----IH 116

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
              +   +HRD+K  NVLID   + +L DFG A      K+ ++   VGT  YIAPE+  
Sbjct: 117 SVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLT 176

Query: 523 T--GKASCSTDV----FAYGVLLLEIATGRRPIDSD 552
           T  G    +  V    ++ GV+  E+  GR P    
Sbjct: 177 TMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG 212

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 4e-12
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           K  L LV +Y+  G   SL+         W +++  I  +  G+  LH+     +IHRD+
Sbjct: 69  KDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQY--IAEVVLGVEDLHQRG---IIHRDI 123

Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
           K  N+LID   + +L DFGL+R     K       VGT  Y+APE          +D ++
Sbjct: 124 KPENLLIDQTGHLKLTDFGLSRNGLENK-----KFVGTPDYLAPETILGVGDDKMSDWWS 178

Query: 535 YGVLLLEIATGRRPIDSD 552
            G ++ E   G  P  ++
Sbjct: 179 LGCVIFEFLFGYPPFHAE 196

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 67.5 bits (165), Expect = 4e-12
 Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 16/139 (11%)

Query: 415 KRDLLLVYDYIPNGSL-----DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
           K  L  V +Y+  G L      S  FD          RF   + I  GL +LH++    +
Sbjct: 68  KEHLFFVMEYLNGGDLMFHIQSSGRFDEA------RARFYAAE-IICGLQFLHKKG---I 117

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           I+RD+K  NVL+D D + ++ DFG+ +   +G+    +   GT  YIAPE+ +  K + S
Sbjct: 118 IYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKASTFCGTPDYIAPEILKGQKYNES 176

Query: 530 TDVFAYGVLLLEIATGRRP 548
            D +++GVLL E+  G+ P
Sbjct: 177 VDWWSFGVLLYEMLIGQSP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 67.5 bits (165), Expect = 4e-12
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ-RFNIIKGIAAGLLY 460
           H  LV L    + +  L  V +++  G L  +        L  E  RF   + I+  L +
Sbjct: 55  HPFLVGLHSCFQTESRLFFVIEFVSGGDL--MFHMQRQRKLPEEHARFYSAE-ISLALNF 111

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           LHE   + +I+RD+K  NVL+DA+ + +L D+G+ +         T+   GT  YIAPE+
Sbjct: 112 LHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE-GIRPGDTTSTFCGTPNYIAPEI 167

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPID 550
            R      S D +A GVL+ E+  GR P D
Sbjct: 168 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 67.4 bits (164), Expect = 4e-12
 Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 6/146 (4%)

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L    +    L LV +Y+  G L  +        L  E        I   L +LHE 
Sbjct: 58  LVGLHSCFQTTSRLFLVIEYVNGGDL--MFHMQRQRKLPEEHARFYAAEICIALNFLHE- 114

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
             + +I+RD+K  NVL+DAD + +L D+G+ +    G    T+   GT  YIAPE+ R  
Sbjct: 115 --RGIIYRDLKLDNVLLDADGHIKLTDYGMCKE-GLGPGDTTSTFCGTPNYIAPEILRGE 171

Query: 525 KASCSTDVFAYGVLLLEIATGRRPID 550
           +   S D +A GVL+ E+  GR P D
Sbjct: 172 EYGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 67.7 bits (165), Expect = 4e-12
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 14/149 (9%)

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG-IAAGLLYLHE 463
           LV L    + +  L L+ DY+  G + + L+  +NF    E       G I   L +LH+
Sbjct: 67  LVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFS---EDEVRFYSGEIILALEHLHK 123

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
                +++RD+K  N+L+D++ +  L DFGL++ F   +   T +  GTI Y+APE+ R 
Sbjct: 124 ---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRG 180

Query: 524 ----GKASCSTDVFAYGVLLLEIATGRRP 548
               GKA    D ++ G+L+ E+ TG  P
Sbjct: 181 KGGHGKA---VDWWSLGILIFELLTGASP 206

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 67.4 bits (164), Expect = 4e-12
 Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 9/167 (5%)

Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLS 443
           P    +   E++ L      ++V   G      ++ +  +++  GSLD +L + +     
Sbjct: 44  PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE 103

Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGK 502
              + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D   
Sbjct: 104 ILGKVSI--AVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 156

Query: 503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
            S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 157 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPI 202

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 67.1 bits (164), Expect = 5e-12
 Identities = 35/101 (34%), Positives = 60/101 (59%), Gaps = 7/101 (6%)

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTN 508
           I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D    S   +
Sbjct: 104 ISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANS 157

Query: 509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
            VGT  Y++PE  +    +  +D+++ G+ L+E+A GR PI
Sbjct: 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPI 198

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 67.0 bits (163), Expect = 6e-12
 Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 34/261 (13%)

Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 61  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYS 120

Query: 435 FDN---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
           FD        L+++   +    +A G+ YL     Q  IHRD+ + NVL+  D   ++ D
Sbjct: 121 FDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVTEDNVMKIAD 177

Query: 492 FGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR + +      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 178 FGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 237

Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 238 PG---IPVEELFKLLKEGHRMD------KPANCTHELYMIMR---ECWHAVPSQRPTFKQ 285

Query: 610 VLRYLNGDELLPIIDNWSSLD 630
           ++  L  D +L +      LD
Sbjct: 286 LVEDL--DRVLTVTSTDEYLD 304

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 66.2 bits (161), Expect = 8e-12
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 20/201 (9%)

Query: 346 LDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHL 405
           L C H+   +    A K FK SE        EV +    T +RE    ++ L  L+ +++
Sbjct: 18  LKCRHK--ETKEIVAIKKFKDSE-----ENEEVKE----TTLRE----LKMLRTLKQENI 62

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V L+   +R+  L LV++Y+    L+ LL +  N V   + R  I + I A    +H   
Sbjct: 63  VELKEAFRRRGKLYLVFEYVEKNMLE-LLEEMPNGVPPEKVRSYIYQLIKA----IHWCH 117

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  ++HRD+K  N+LI  +   +L DFG AR    G  ++ T  V T  Y +PEL     
Sbjct: 118 KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAP 177

Query: 526 ASCSTDVFAYGVLLLEIATGR 546
              + D+++ G +L E++ G+
Sbjct: 178 YGKAVDMWSVGCILGELSDGQ 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 66.4 bits (162), Expect = 8e-12
 Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 20/160 (12%)

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------I 454
           +H  L  L    + K  L  V +Y+  G L         F +   ++F+  +       +
Sbjct: 54  KHPFLTALHCCFQTKDRLFFVMEYVNGGDL--------MFQIQRSRKFDEPRSRFYAAEV 105

Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTI 513
              L++LH      VI+RD+K  N+L+DA+ + +L DFG+ +    +G    TT   GT 
Sbjct: 106 TLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT--TTTFCGTP 160

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
            YIAPE+ +  +   S D +A GVL+ E+  G+ P ++D+
Sbjct: 161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN 200

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 66.6 bits (162), Expect = 9e-12
 Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 69  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 126

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           E   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 127 E---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESI 183

Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 184 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 213

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 65.8 bits (160), Expect = 9e-12
 Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 40/212 (18%)

Query: 368 EVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHKHLV 406
           E +G   FG++YKG L                     P +  EF  E   +  L H ++V
Sbjct: 11  EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIV 70

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLF------------DNENFV---LSWEQRFNII 451
            L G   +++ + ++++Y+  G L   L             D +  V   L      +I 
Sbjct: 71  CLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIA 130

Query: 452 KGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVV 510
             IAAG+ YL   +    +H+D+ + N+LI   ++ ++ D GL+R ++           +
Sbjct: 131 IQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSL 187

Query: 511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
             I ++ PE    GK S  +D++++GV+L EI
Sbjct: 188 LPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 65.6 bits (160), Expect = 1e-11
 Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 32/205 (15%)

Query: 369 VIGTGGFGEVYKG-----------------VLPTR-----MREFAAEIESLGRLRHKHLV 406
            +G G FGEV+                    L          EF  E++   +L HK++V
Sbjct: 12  TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVV 71

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV-------LSWEQRFNIIKGIAAGLL 459
            L G C+      ++ +Y   G L   L   ++         LS +Q+  +   IA G+ 
Sbjct: 72  RLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMD 131

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           +L        +HRD+ + N L+ +    ++    L++   + +     N +  + ++APE
Sbjct: 132 HLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPE 188

Query: 520 LARTGKASCSTDVFAYGVLLLEIAT 544
             +    S  +DV+++GVL+ E+ T
Sbjct: 189 AVQEDDFSTKSDVWSFGVLMWEVFT 213

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 14/174 (8%)

Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL------- 434
           V  T   +F  EI+ + RL++ +++ L G C     L ++ +Y+ NG L+  L       
Sbjct: 56  VTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIES 115

Query: 435 -FDNENFV--LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
            F + N +  +S      +   IA+G+ YL        +HRD+ + N L+      ++ D
Sbjct: 116 TFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIAD 172

Query: 492 FGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           FG++R L+           V  I ++A E    GK + ++DV+A+GV L E+ T
Sbjct: 173 FGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 65.5 bits (159), Expect = 2e-11
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H  LV L    + +  L  V +Y+  G L  +        L  E        I+  L YL
Sbjct: 55  HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYL 112

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-VGTIGYIAPEL 520
           HE   + +I+RD+K  NVL+D++ + +L D+G+ +  +  +   TT+   GT  YIAPE+
Sbjct: 113 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEI 167

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPID 550
            R      S D +A GVL+ E+  GR P D
Sbjct: 168 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 64.9 bits (158), Expect = 2e-11
 Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 46/272 (16%)

Query: 370 IGTGGFGEVYKGVL--PT----------------RMREFAAEIESLGRLRHKHLVNLQGW 411
           +G G +G VYK VL  PT                +  +   E++ L +    ++V+  G 
Sbjct: 9   LGKGNYGSVYK-VLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGA 67

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA----GLLYLHEEWEQ 467
              +  + +  +Y+  GSLD L           E   ++++ I      GL +L EE   
Sbjct: 68  FFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPE---DVLRRITYAVVKGLKFLKEEHN- 123

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA- 526
            +IHRDVK  NVL++ +   +L DFG++       ++ T   +G   Y+APE  ++G   
Sbjct: 124 -IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV-ASLAKTN--IGCQSYMAPERIKSGGPN 179

Query: 527 -----SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY 581
                +  +DV++ G+ +LE+A GR P   + +  +     F  L  ++D   P L S Y
Sbjct: 180 QNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-----FAQLSAIVDGDPPTLPSGY 234

Query: 582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
                + V      C ++    RPT  Q+L +
Sbjct: 235 SDDAQDFV----AKCLNKIPNRRPTYAQLLEH 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 65.1 bits (158), Expect = 3e-11
 Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)

Query: 362 KGFKQSEVIGTGGFGEVY--------KGVLPTRM-----------REFAAEIESLGRLRH 402
           K F     IG G FG VY        + V   +M           ++   E+  L +LRH
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            + +  +G   R+    LV +Y    + D  L +     L   +   +  G   GL YLH
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLH 132

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL-- 520
                 +IHRDVK+GN+L+      +LGDFG A +     ++     VGT  ++APE+  
Sbjct: 133 S---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI-----MAPANXFVGTPYWMAPEVIL 184

Query: 521 -ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
               G+     DV++ G+  +E+A  + P+
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPL 214

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 65.0 bits (158), Expect = 3e-11
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 4/99 (4%)

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           I+ GL +LH    + +I+RD+K  NV++D++ + ++ DFG+ +      ++ T    GT 
Sbjct: 110 ISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT-TRTFCGTP 165

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
            YIAPE+        S D +AYGVLL E+  G+ P D +
Sbjct: 166 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 204

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 64.6 bits (157), Expect = 3e-11
 Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 24/204 (11%)

Query: 364 FKQSEVIGTGGFGEV-----------------YKGVLPTRMREFAA--EIESLGRLRHKH 404
           F+   V+G GGFGEV                  K  +  R  E  A  E   L ++  + 
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRF 61

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +V+L    + K  L LV   +  G L   +++  N     ++       +  GL  L  E
Sbjct: 62  VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE 121

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +++RD+K  N+L+D   + R+ D GLA     G+       VGT+GY+APE+    
Sbjct: 122 ---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET--VRGRVGTVGYMAPEVINNE 176

Query: 525 KASCSTDVFAYGVLLLEIATGRRP 548
           K + S D +  G L+ E+  G+ P
Sbjct: 177 KYTFSPDWWGLGCLIYEMIQGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 25/210 (11%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA-------------------AEIESLGRLRHKH 404
           F+  + IG G F EVY+       +  A                    EI+ L +L H +
Sbjct: 4   FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPN 63

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLH 462
           ++          +L +V +    G L  ++  F  +  ++     +     + + + ++H
Sbjct: 64  VIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH 123

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
               + V+HRD+K  NV I A    +LGD GL R F   K +   ++VGT  Y++PE   
Sbjct: 124 S---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERIH 179

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
               +  +D+++ G LL E+A  + P   D
Sbjct: 180 ENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 64.1 bits (156), Expect = 3e-11
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 29/198 (14%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFA-----------------AEIESLGRLRHKHLVNLQG 410
           E++G G  G VYK       R  A                 +E+E L +    +++   G
Sbjct: 7   EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYG 66

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
               +  + +  +++  GSLD      E+ VL       I   +  GL YL   W   ++
Sbjct: 67  AFFVENRISICTEFMDGGSLDVYRKIPEH-VLG-----RIAVAVVKGLTYL---WSLKIL 117

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           HRDVK  N+L++     +L DFG++    +   S     VGT  Y+APE     +    +
Sbjct: 118 HRDVKPSNMLVNTRGQVKLCDFGVSTQLVN---SIAKTYVGTNAYMAPERISGEQYGIHS 174

Query: 531 DVFAYGVLLLEIATGRRP 548
           DV++ G+  +E+A GR P
Sbjct: 175 DVWSLGISFMELALGRFP 192

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 64.4 bits (157), Expect = 4e-11
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 14/147 (9%)

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H+++VNL G C     +L++ +Y   G L + L       L+ E   +    +A G+ +L
Sbjct: 98  HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL 157

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT------IGY 515
                +  IHRD+ + NVL+      ++ DFGLAR      I + +N V        + +
Sbjct: 158 AS---KNCIHRDLAARNVLLTHGKIVKICDFGLAR-----DIMNDSNYVVKGNARLPVKW 209

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEI 542
           +APE       +  +DV++YG+LL EI
Sbjct: 210 MAPESIFNCVYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 64.3 bits (157), Expect = 4e-11
 Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 12/121 (9%)

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKIS-HTTNVV 510
           I  GL Y+H      V+HRD+K GN+L++AD   ++ DFGLAR F  + G+ +   T  V
Sbjct: 114 ILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYV 170

Query: 511 GTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV 569
            T  Y APE+  + ++ + + DV++ G +L E+  GR+P+    F   D+V +   + QV
Sbjct: 171 ATRWYRAPEIMLSFQSYTKAIDVWSVGCILAEL-LGRKPV----FKGKDYVDQLNQILQV 225

Query: 570 L 570
           L
Sbjct: 226 L 226

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 63.9 bits (155), Expect = 5e-11
 Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
            K+ +V+G+G FG VYKG+                      P   +E   E   +  +  
Sbjct: 9   LKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 68

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++  L G C     + LV   +P G L   + +N++ + S +   N    IA G+ YL 
Sbjct: 69  PYVCRLLGIC-LTSTVQLVTQLMPYGCLLDYVRENKDRIGS-QDLLNWCVQIAKGMSYLE 126

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELA 521
           E     ++HRD+ + NVL+ +  + ++ DFGLARL D  +   H       I ++A E  
Sbjct: 127 E---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 183

Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPIDS 551
              + +  +DV++YGV + E+ T G +P D 
Sbjct: 184 LHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 63.6 bits (155), Expect = 5e-11
 Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 45/211 (21%)

Query: 368 EVIGTGGFGEVYKG--------VLPTRMR---------EFAA-EIESLGRLRHKHLVNLQ 409
           E IG G +G V+K         V   R+R           A  EI  L  L+HK++V L 
Sbjct: 6   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLY 65

Query: 410 GWCKRKRDLLLVYDYIP----------NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                 + L LV++Y            NG +D         V S+   F ++KG+A    
Sbjct: 66  DVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDP------EIVKSF--MFQLLKGLA---- 113

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           + H      V+HRD+K  N+LI+ +   +L DFGLAR F      ++  VV T+ Y  P+
Sbjct: 114 FCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPD 169

Query: 520 LARTGKA-SCSTDVFAYGVLLLEIATGRRPI 549
           +    K  S S D+++ G +  E+A   RP+
Sbjct: 170 VLFGAKLYSTSIDMWSAGCIFAELANAGRPL 200

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 63.3 bits (154), Expect = 5e-11
 Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 38/216 (17%)

Query: 368 EVIGTGGFGEVYK------GVLPTRMREFAAEIESLGR---------------------- 399
           E +G+G FG VYK      G     ++E      + G+                      
Sbjct: 6   EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ 65

Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL----DSLLFDNENFVLSWEQRFNIIKGIA 455
           LRH ++V           L +V D I    L    +SL    + F  + E+ +NI   + 
Sbjct: 66  LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRF--TEERIWNIFVQMV 123

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
             L YLH+E  + ++HRD+   N+++  D    + DFGLA+       S  T+VVGTI Y
Sbjct: 124 LALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAK--QKQPESKLTSVVGTILY 179

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS 551
             PE+ +        DV+A+G +L ++ T + P  S
Sbjct: 180 SCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYS 215

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 63.9 bits (156), Expect = 5e-11
 Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 17/129 (13%)

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVGT 512
           I   L YL E+    VIHRDVK  N+L+DA  N +L DFG++ RL D    + T +  G 
Sbjct: 123 IVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD--SKAKTRS-AGC 177

Query: 513 IGYIAPEL----ARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ 568
             Y+APE         K     DV++ G+ L+E+ATG+ P  +          EF+ L +
Sbjct: 178 AAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK-------TEFEVLTK 230

Query: 569 VLDVVDPNL 577
           +L    P+L
Sbjct: 231 ILQEEPPSL 239

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 63.3 bits (155), Expect = 5e-11
 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 19/157 (12%)

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD---NENFVLSWEQRFNIIKGIAAGL 458
           + + + L       +  +L+ DYI +G     LFD    E  +   E +  II+ +   L
Sbjct: 68  NPNFIKLYYSVTTLKGHVLIMDYIKDGD----LFDLLKKEGKLSEAEVK-KIIRQLVEAL 122

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMN-ARLGDFGLARLFDHGKISHTTNVV-GTIGYI 516
             LH   +  +IH D+K  NVL D   +   L D+GL       KI  T +   GT+ Y 
Sbjct: 123 NDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLC------KIIGTPSCYDGTLDYF 173

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           +PE  +      S D +A GVL  E+ TG+ P   D 
Sbjct: 174 SPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDE 210

Length = 267

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 63.9 bits (155), Expect = 6e-11
 Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 39/241 (16%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI----ESLGRLR---------------HKH 404
           F+  +VIG G FGEV    L    + FA +I    E L R                 ++ 
Sbjct: 3   FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQW 62

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA--GLLYLH 462
           +  L    + + +L LV DY   G L +LL   E+ +     RF + + + A   +  LH
Sbjct: 63  ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH 122

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFG-LARLFDHGKISHTTNVVGTIGYIAPELA 521
                  +HRD+K  N+L+D + + RL DFG   +L + G +  +   VGT  YI+PE+ 
Sbjct: 123 ------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV-AVGTPDYISPEIL 175

Query: 522 RT-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-----LVDWVLEFQHLGQVLD 571
           +      GK     D ++ GV + E+  G  P  ++  +     +++    FQ   QV D
Sbjct: 176 QAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTD 235

Query: 572 V 572
           V
Sbjct: 236 V 236

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 63.5 bits (154), Expect = 8e-11
 Identities = 66/256 (25%), Positives = 115/256 (44%), Gaps = 34/256 (13%)

Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 67  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYC 126

Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                     LS++   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 127 YNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 183

Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 184 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243

Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 244 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 291

Query: 610 VLRYLNGDELLPIIDN 625
           ++  L  D +L +  N
Sbjct: 292 LVEDL--DRILALTSN 305

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 63.4 bits (154), Expect = 9e-11
 Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 25/174 (14%)

Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL-------------- 434
           +F  E++ L RL+  +++ L G C  +  L ++ +Y+ NG L+  L              
Sbjct: 65  DFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGND 124

Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                +    +S+    ++   IA+G+ YL        +HRD+ + N L+  ++  ++ D
Sbjct: 125 AVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIAD 181

Query: 492 FGLAR-LF--DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
           FG++R L+  D+ +I      V  I ++A E    GK + ++DV+A+GV L EI
Sbjct: 182 FGMSRNLYAGDYYRIQ--GRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI 233

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 62.9 bits (153), Expect = 9e-11
 Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 50/225 (22%)

Query: 364 FKQSEVIGTGGFGEVYKGVLP---------------------TRMREFAAEIESLGRLRH 402
            K  +++G G FG V +G L                      + + EF +E   +    H
Sbjct: 1   LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH 60

Query: 403 KHLVNLQGWCKRKRDL------LLVYDYIPNGSLDSLLFDN------ENFVLSWEQRFNI 450
            +++ L G C     L      +++  ++ +G L S L  +      E   L    +F +
Sbjct: 61  PNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMV 120

Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR------LFDHGKIS 504
              IA G+ YL     +  IHRD+ + N ++  DM   + DFGL++       +  G+I+
Sbjct: 121 --DIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIA 175

Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
                   + +IA E       +  +DV+A+GV + EIAT G+ P
Sbjct: 176 KM-----PVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTP 215

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 62.7 bits (152), Expect = 9e-11
 Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 31/203 (15%)

Query: 369 VIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNL------------QGWC---- 412
           +IG GGFGEVY        + +A +     R++ K    L             G C    
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 60

Query: 413 ------KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
                      L  + D +  G L   L  +  F    E RF   + I  GL ++H  + 
Sbjct: 61  CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEK-EMRFYATE-IILGLEHMHNRF- 117

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
             V++RD+K  N+L+D   + R+ D GLA  F   K  H +  VGT GY+APE+ + G A
Sbjct: 118 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTHGYMAPEVLQKGTA 172

Query: 527 -SCSTDVFAYGVLLLEIATGRRP 548
              S D F+ G +L ++  G  P
Sbjct: 173 YDSSADWFSLGCMLFKLLRGHSP 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 62.6 bits (152), Expect = 9e-11
 Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 39/209 (18%)

Query: 368 EVIGTGGFGEVYKG-------------------VLPTRMREF------AAEIESLGRLRH 402
           E +G G F +++KG                   VL    R +      AA + S  +L H
Sbjct: 1   ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMS--QLSH 58

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV-LSWEQRFNIIKGIAAGLLYL 461
           KHLV   G C    + ++V +Y+  GSLD+ L  N+N + +SW  +  + K +A  L +L
Sbjct: 59  KHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KLEVAKQLAWALHFL 116

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN----VVGTIGYIA 517
               ++ + H +V + NVL+  + + + G+    +L D G IS T      ++  I ++ 
Sbjct: 117 E---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG-ISITVLPKEILLERIPWVP 172

Query: 518 PELARTGKA-SCSTDVFAYGVLLLEIATG 545
           PE     +  S + D +++G  L EI +G
Sbjct: 173 PECIENPQNLSLAADKWSFGTTLWEIFSG 201

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 38/258 (14%)

Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 64  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 123

Query: 435 FDNENFV---LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
           +D        ++++   +    +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 124 YDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 180

Query: 492 FGLARLFDHGKISH---TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRR 547
           FGLAR  D   I +   TTN    + ++APE       +  +DV+++GVL+ EI T G  
Sbjct: 181 FGLAR--DVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 238

Query: 548 PIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTM 607
           P      I V+ + +    G  +D        +    E+ ++++    C H     RPT 
Sbjct: 239 PYPG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAIPSHRPTF 286

Query: 608 RQVLRYLNGDELLPIIDN 625
           +Q++  L  D +L +  N
Sbjct: 287 KQLVEDL--DRILTLTTN 302

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 4/99 (4%)

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA GL +LH +    +I+RD+K  NV++D++ + ++ DFG+ +      ++ T    GT 
Sbjct: 110 IAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT-TKTFCGTP 165

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
            YIAPE+        S D +A+GVLL E+  G+ P + +
Sbjct: 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 204

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 62.8 bits (152), Expect = 1e-10
 Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)

Query: 362 KGFKQSEVIGTGGFGEVY--------KGVLPTRM-----------REFAAEIESLGRLRH 402
           K F     IG G FG VY        + V   +M           ++   E++ L R++H
Sbjct: 25  KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH 84

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            + +  +G   R+    LV +Y    + D  L +     L   +   I  G   GL YLH
Sbjct: 85  PNSIEYKGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAITHGALQGLAYLH 142

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL-- 520
                 +IHRD+K+GN+L+      +L DFG A +      S   + VGT  ++APE+  
Sbjct: 143 S---HNMIHRDIKAGNILLTEPGQVKLADFGSASI-----ASPANSFVGTPYWMAPEVIL 194

Query: 521 -ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
               G+     DV++ G+  +E+A  + P+
Sbjct: 195 AMDEGQYDGKVDVWSLGITCIELAERKPPL 224

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 29/211 (13%)

Query: 368 EVIGTGGFGEV----YKGVLPTRMREFAAEIESLGRLRHKHLVN-------------LQG 410
           +VIG G FGEV    +K        +  ++ E + R                     +Q 
Sbjct: 49  KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 108

Query: 411 WCKRKRD--LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
           +C  + D  L +V +Y+P G L +L+  N +    W + +      A  +L L       
Sbjct: 109 FCAFQDDKYLYMVMEYMPGGDLVNLM-SNYDVPEKWAKFYT-----AEVVLALDAIHSMG 162

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART----G 524
           +IHRDVK  N+L+D   + +L DFG     D   +      VGT  YI+PE+ ++    G
Sbjct: 163 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDG 222

Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
                 D ++ GV L E+  G  P  +D  +
Sbjct: 223 YYGRECDWWSVGVFLFEMLVGDTPFYADSLV 253

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 62.7 bits (152), Expect = 1e-10
 Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 18/153 (11%)

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IA 455
           H  L +L    + K +L  V +Y+  G L         F +    +F++ +       I 
Sbjct: 55  HPFLTHLYCTFQTKENLFFVMEYLNGGDL--------MFHIQSCHKFDLPRATFYAAEII 106

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
            GL +LH +    +++RD+K  N+L+D D + ++ DFG+ +    G  + T    GT  Y
Sbjct: 107 CGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCTFCGTPDY 162

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           IAPE+    K + S D +++GVLL E+  G+ P
Sbjct: 163 IAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 62.5 bits (152), Expect = 2e-10
 Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 29/203 (14%)

Query: 368 EVIGTGGFGEVY--------------------KGVLPTRMR-EFAAEIESLGRLRHKHLV 406
           +V+G G FG+V+                    K  L  R R     E + L  + H  +V
Sbjct: 2   KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV 61

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L    + +  L L+ D++  G L + L   E      + +F + + +A  L +LH    
Sbjct: 62  KLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAE-LALALDHLHS--- 116

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
             +I+RD+K  N+L+D + + +L DFGL++   DH K     +  GT+ Y+APE+     
Sbjct: 117 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRG 174

Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
            + S D +++GVL+ E+ TG  P
Sbjct: 175 HTQSADWWSFGVLMFEMLTGSLP 197

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 62.7 bits (152), Expect = 2e-10
 Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 9/167 (5%)

Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLS 443
           P    +   E++ L      ++V   G      ++ +  +++  GSLD +L         
Sbjct: 44  PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ 103

Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGK 502
              + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D   
Sbjct: 104 ILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--- 156

Query: 503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
            S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 157 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPI 202

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 33/212 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGV------------------LPTRMREFAAEIESLGRLRHKHL 405
           +K  E IG+G +G V   +                  +PT  +    E++ L   +H ++
Sbjct: 7   YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNI 66

Query: 406 VNLQGWCKRK----RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           + ++   +      +D+ +V D + +  L  ++  ++       + F  +  +  GL Y+
Sbjct: 67  IAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYF--LYQLLRGLKYI 123

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT---TNVVGTIGYIAP 518
           H      VIHRD+K  N+L++ D   R+GDFG+AR        H    T  V T  Y AP
Sbjct: 124 H---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAP 180

Query: 519 ELART-GKASCSTDVFAYGVLLLEIATGRRPI 549
           EL  +  + + + D+++ G +  E+  GRR +
Sbjct: 181 ELLLSLPEYTTAIDMWSVGCIFAEM-LGRRQL 211

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 62.6 bits (153), Expect = 2e-10
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 10/93 (10%)

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV----VGTIGY 515
           Y+H      VIHRD+K  N+L+++D   +L DFGLAR     + +    V    V T  Y
Sbjct: 122 YIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWY 178

Query: 516 IAPE--LARTGKASCSTDVFAYGVLLLEIATGR 546
            APE  L  T + +   D+++ G +L E+  G+
Sbjct: 179 RAPEILLGST-RYTKGVDMWSVGCILGEMLLGK 210

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 35/202 (17%)

Query: 370 IGTGGFGEVYKGVLPTRMREFAA--------------------EIESLGRLRHKHLVNLQ 409
           IG G FG VY      R  E  A                    E+  L +LRH + +  +
Sbjct: 23  IGHGSFGAVYFAR-DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYK 81

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
           G   R+    LV +Y    + D  + +     L   +   I  G   GL YLH       
Sbjct: 82  GCYLREHTAWLVMEYCLGSASD--ILEVHKKPLQEVEIAAICHGALQGLAYLHS---HER 136

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE--LAR-TGKA 526
           IHRD+K+GN+L+      +L DFG A L     +S   + VGT  ++APE  LA   G+ 
Sbjct: 137 IHRDIKAGNILLTEPGTVKLADFGSASL-----VSPANSFVGTPYWMAPEVILAMDEGQY 191

Query: 527 SCSTDVFAYGVLLLEIATGRRP 548
               DV++ G+  +E+A  R+P
Sbjct: 192 DGKVDVWSLGITCIELAE-RKP 212

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 62.4 bits (152), Expect = 2e-10
 Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 37/215 (17%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA------------EIESL----------GRLR 401
           F+   V+G G FG+V           +A             E+ESL             R
Sbjct: 1   FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER 60

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA----G 457
           H  LVNL    + +  +  V +Y   G  D ++  + +        F      AA    G
Sbjct: 61  HPFLVNLFACFQTEDHVCFVMEYAAGG--DLMMHIHTDVFSEPRAVF-----YAACVVLG 113

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
           L YLHE     +++RD+K  N+L+D +   ++ DFGL +    G    T+   GT  ++A
Sbjct: 114 LQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKE-GMGFGDRTSTFCGTPEFLA 169

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           PE+      + + D +  GVL+ E+  G  P   D
Sbjct: 170 PEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD 204

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 18/159 (11%)

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL-----------FDNENF---VLSWEQ 446
           +HK+++NL G C ++  L ++ +Y   G+L   L           FD        LS++ 
Sbjct: 76  KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135

Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISH 505
             +    +A G+ YL     +  IHRD+ + NVL+  D   ++ DFGLAR + D      
Sbjct: 136 LVSCAYQVARGMEYLES---RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK 192

Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           T+N    + ++APE       +  +DV+++G+L+ EI T
Sbjct: 193 TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 62.0 bits (150), Expect = 2e-10
 Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 7/152 (4%)

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +H+++V +        +L ++ +++  G+L  ++       L+ EQ   + + +   L Y
Sbjct: 76  QHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTR---LNEEQIATVCESVLQALCY 132

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           LH    Q VIHRD+KS ++L+  D   +L DFG         +    ++VGT  ++APE+
Sbjct: 133 LHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKSLVGTPYWMAPEV 188

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
                     D+++ G++++E+  G  P  SD
Sbjct: 189 ISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD 220

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 63.2 bits (153), Expect = 2e-10
 Identities = 45/160 (28%), Positives = 87/160 (54%), Gaps = 17/160 (10%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLV---YDYIPNGSLDSLLFDN----ENFVLSWE 445
           EI +LGRL H++++ ++   + + +  ++   YD+     L S ++D     ++  L  +
Sbjct: 213 EILALGRLNHENILKIEEILRSEANTYMITQKYDF----DLYSFMYDEAFDWKDRPLLKQ 268

Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH 505
            R  I+K +   + Y+H+   + +IHRD+K  N+ ++ D    LGDFG A  F+  + + 
Sbjct: 269 TR-AIMKQLLCAVEYIHD---KKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAF 324

Query: 506 TTNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIAT 544
               VGT+   +PE LA  G     TD+++ G++LL++ +
Sbjct: 325 DYGWVGTVATNSPEILAGDGYCEI-TDIWSCGLILLDMLS 363

Length = 501

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 62.2 bits (151), Expect = 2e-10
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 4/99 (4%)

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           I + L++LH++    +I+RD+K  NVL+D + + +L DFG+ +       + T+   GT 
Sbjct: 105 ITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT-TSTFCGTP 160

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
            YIAPE+ +      S D +A GVLL E+  G  P +++
Sbjct: 161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE 199

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 62.5 bits (152), Expect = 2e-10
 Identities = 72/255 (28%), Positives = 101/255 (39%), Gaps = 76/255 (29%)

Query: 364 FKQSEVIGTGGFGEVY------------------KGVLPTRMREFAAEIES----LGRLR 401
           F + + IG G FGEV                     VL   MR  AA +++    L    
Sbjct: 3   FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL---MRNQAAHVKAERDILAEAD 59

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           ++ +V L    + K +L  V DYIP G + SLL     F      RF I + +   +  +
Sbjct: 60  NEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDL-ARFYIAE-LTCAIESV 117

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-------HGKISHTT------- 507
           H+      IHRD+K  N+LID D + +L DFGL   F        + K  H         
Sbjct: 118 HK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPS 174

Query: 508 ----------------------------NVVGTIGYIAPE-LARTG-KASCSTDVFAYGV 537
                                       ++VGT  YIAPE L RTG    C  D ++ GV
Sbjct: 175 EEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLC--DWWSVGV 232

Query: 538 LLLEIATGRRPIDSD 552
           +L E+  G+ P  +D
Sbjct: 233 ILYEMLVGQPPFLAD 247

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 61.6 bits (149), Expect = 3e-10
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 13/158 (8%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL---FDNENFVLSWEQRFN 449
           E+  L  L+H ++V L      +R L LV++Y     LDS L    DN   ++S      
Sbjct: 53  EVSLLKNLKHANIVTLHDIIHTERCLTLVFEY-----LDSDLKQYLDNCGNLMSMHNVKI 107

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
            +  +  GL Y H+   + ++HRD+K  N+LI+     +L DFGLAR       +++  V
Sbjct: 108 FMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEV 164

Query: 510 VGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           V T+ Y  P+ L  + + S   D++  G +L E+ATGR
Sbjct: 165 V-TLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 62.1 bits (151), Expect = 3e-10
 Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 31/218 (14%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAA-----EIESLGR------------LRHKH 404
           + F   +VIG G FGEV + V     ++  A     + E + R            + H +
Sbjct: 43  EDFDVIKVIGRGAFGEV-QLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN 101

Query: 405 ---LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
              +V L    +  + L +V +Y+P G L +L+  N +    W  RF   + + A L  +
Sbjct: 102 SEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM-SNYDIPEKW-ARFYTAEVVLA-LDAI 158

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H       IHRDVK  N+L+D   + +L DFG     D   +      VGT  YI+PE+ 
Sbjct: 159 HS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVL 215

Query: 522 RT----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           ++    G      D ++ GV L E+  G  P  +D  +
Sbjct: 216 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 253

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 61.4 bits (149), Expect = 4e-10
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 54/217 (24%)

Query: 364 FKQSEVIGTGGFGEV----------YKGVLPTRMREF---------AAEIESLGRLRHKH 404
           F+  E +GTG FG V          Y  +   + RE          A E   L  L H  
Sbjct: 20  FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPF 79

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLL-----FDNE-------NFVLSWEQRFNIIK 452
           +VN+    + +  +  + +++  G L + L     F N+         VL++E       
Sbjct: 80  IVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFE------- 132

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT-NVVG 511
                  YLH    + +I+RD+K  N+L+D   + ++ DFG A+     K+   T  + G
Sbjct: 133 -------YLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAK-----KVPDRTFTLCG 177

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           T  Y+APE+ ++     + D +  GVLL E   G  P
Sbjct: 178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPP 214

Length = 329

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 61.5 bits (149), Expect = 4e-10
 Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 40/230 (17%)

Query: 350 HRFRYSDLYTATKGFKQSEVIGTGGFGEV----YKG--VLPTRMREFA------------ 391
           ++ +Y D       F     +GTG FG V    YK     P  ++ F             
Sbjct: 25  NKMKYED-------FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDH 77

Query: 392 --AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN 449
             +E + L  + H   VNL G  K +  L LV +++  G   + L  N+ F        N
Sbjct: 78  VFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFP-------N 130

Query: 450 IIKGIAAGLLYLHEEWEQV--VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT 507
            +    A  + L  E+ Q   +++RD+K  N+L+D D   ++ DFG A++ D    + T 
Sbjct: 131 DVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD----TRTY 186

Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
            + GT  YIAPE+        + D +  G+ + EI  G  P  ++  +L+
Sbjct: 187 TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI 236

Length = 340

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 60.8 bits (147), Expect = 5e-10
 Identities = 66/276 (23%), Positives = 121/276 (43%), Gaps = 51/276 (18%)

Query: 370 IGTGGFGEVYKGVLP--------TR-----------MRE---FAAEIESLGRLRHKHLVN 407
           +G G FG VY+G+          TR           MRE   F  E   +      H+V 
Sbjct: 14  LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNENFVL----SWEQRFNIIKGIAAGLL 459
           L G   + +  L++ + +  G L S L     + EN  +    S ++   +   IA G+ 
Sbjct: 74  LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMA 133

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+       +HRD+ + N ++  D   ++GDFG+ R +++          +  + +++P
Sbjct: 134 YLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 190

Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVD--P 575
           E  + G  +  +DV+++GV+L EIAT   +P      +  + VL F   G +LD  D  P
Sbjct: 191 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---MSNEQVLRFVMEGGLLDKPDNCP 247

Query: 576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                      +++ +L  +C     + RP+  +++
Sbjct: 248 -----------DMLFELMRMCWQYNPKMRPSFLEII 272

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 61.0 bits (148), Expect = 5e-10
 Identities = 61/214 (28%), Positives = 88/214 (41%), Gaps = 27/214 (12%)

Query: 369 VIGTGGFGEVYKG------------VLP---TRMREFAAEIES-----LGRLRHKHLVNL 408
           VIG G FG+V               VL       ++    I +     L  ++H  LV L
Sbjct: 2   VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGL 61

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
               +    L  V DY+  G L   L   E        RF   + IA+ L YLH      
Sbjct: 62  HYSFQTADKLYFVLDYVNGGELFFHL-QRERSFPEPRARFYAAE-IASALGYLHS---LN 116

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
           +I+RD+K  N+L+D+  +  L DFGL +         T+   GT  Y+APE+ R      
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KTTSTFCGTPEYLAPEVLRKQPYDR 175

Query: 529 STDVFAYGVLLLEIATGRRPIDS-DHFILVDWVL 561
           + D +  G +L E+  G  P  S D   + D +L
Sbjct: 176 TVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL 209

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 60.3 bits (146), Expect = 5e-10
 Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 33/204 (16%)

Query: 369 VIGTGGFGEVY-------------KGVLPTRMREFAAEIESLGRLRHKHLVNLQGWC--- 412
           +IG GGFGEVY             K +   R++    E  +L       LV+  G C   
Sbjct: 1   IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS-TGDCPFI 59

Query: 413 -------KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                       L  + D +  G L   L  +  F  + E RF   + I  GL ++H  +
Sbjct: 60  VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-EMRFYAAE-IILGLEHMHNRF 117

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              V++RD+K  N+L+D   + R+ D GLA  F   K  H +  VGT GY+APE+ + G 
Sbjct: 118 ---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTHGYMAPEVLQKGV 171

Query: 526 A-SCSTDVFAYGVLLLEIATGRRP 548
           A   S D F+ G +L ++  G  P
Sbjct: 172 AYDSSADWFSLGCMLFKLLRGHSP 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 60.3 bits (146), Expect = 6e-10
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 23/203 (11%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHL 405
           K + + E IG G  G VY  +     +E A                 EI  +   +H ++
Sbjct: 19  KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNI 78

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           VN         +L +V +Y+  GSL  ++ +     +   Q   + +     L +LH   
Sbjct: 79  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS-- 133

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              VIHRD+KS N+L+  D + +L DFG        +   +T +VGT  ++APE+     
Sbjct: 134 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKA 191

Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
                D+++ G++ +E+  G  P
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 60.0 bits (145), Expect = 6e-10
 Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 27/201 (13%)

Query: 370 IGTGGFGEVYKGVLPTRMR-------------------EFAAEIESLGRLRHKHLVNLQG 410
           +G+G FG V KGV   R +                   E   E E + +L + ++V + G
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            C+ +  L+LV +    G L+  L   ++  ++      ++  ++ G+ YL     +  +
Sbjct: 63  VCEAE-ALMLVMEMASGGPLNKFLSGKKD-EITVSNVVELMHQVSMGMKYLEG---KNFV 117

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGKASC 528
           HRD+ + NVL+     A++ DFGL++        +     G   + + APE     K S 
Sbjct: 118 HRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSS 177

Query: 529 STDVFAYGVLLLE-IATGRRP 548
            +DV++YG+ + E  + G++P
Sbjct: 178 RSDVWSYGITMWEAFSYGQKP 198

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 60.4 bits (146), Expect = 7e-10
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 49/235 (20%)

Query: 370 IGTGGFGEVYK-----------------------GVLPTRMREFAAEIESLGRLRHKHLV 406
           IG G +G+V+K                       G+  + +RE A  +  L    H ++V
Sbjct: 9   IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVV 67

Query: 407 NLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
            L   C      R+  L LV++++ +  L + L       +  E   +++  +  GL +L
Sbjct: 68  RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 126

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H      V+HRD+K  N+L+ +    +L DFGLAR++        T+VV T+ Y APE+ 
Sbjct: 127 HS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVL 181

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPI---DSDHFILVDWVLEFQHLGQVLDVV 573
                +   D+++ G +  E+   R+P+    SD    VD       LG++LDV+
Sbjct: 182 LQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSD----VD------QLGKILDVI 225

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 60.4 bits (146), Expect = 8e-10
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 7/155 (4%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  L+H ++V L      ++ L LV++Y+ +  L   L D  N +     +  + +
Sbjct: 54  EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMHNVKLFLFQ 112

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            +  GL Y H    + V+HRD+K  N+LI+     +L DFGLAR       +++  VV T
Sbjct: 113 -LLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV-T 167

Query: 513 IGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           + Y  P+ L  +   S   D++  G +  E++TGR
Sbjct: 168 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 60.1 bits (146), Expect = 8e-10
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 16/152 (10%)

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVGTIGYI 516
           L YL EE +  +IHRDVK  N+L+D + N +L DFG++ +L D   I+ T +  G   Y+
Sbjct: 120 LNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD--SIAKTRD-AGCRPYM 174

Query: 517 APE-LARTGKAS--CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV 573
           APE +  + +      +DV++ G+ L E+ATG+ P          W   F  L QV+   
Sbjct: 175 APERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPK-------WNSVFDQLTQVVKGD 227

Query: 574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARP 605
            P L +S         +    LC  +    RP
Sbjct: 228 PPILSNSEEREFSPSFVNFINLCLIKDESKRP 259

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 60.2 bits (147), Expect = 9e-10
 Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 57/219 (26%)

Query: 369 VIGTGGFGEVYKGV--------------LPTRMREFAA----EIESLGRLRHKHLVNLQG 410
            IG+G +G V   V                      A     EI+ L  LRH++++ L  
Sbjct: 7   PIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGL-- 64

Query: 411 WCKRKRDLL------------LVYDYIPNGSLDSLLFDNENFVLSWEQRF--NIIKGIAA 456
                 D+L            +V + +    L  ++   +       Q F   I++G   
Sbjct: 65  -----LDILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRG--- 115

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIG 514
            L YLH      VIHRD+K  N+L++++ + ++ DFGLAR    D  +    T  V T  
Sbjct: 116 -LKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRW 171

Query: 515 YIAPEL----ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
           Y APEL    +R  KA    D+++ G +  E+ T R+P+
Sbjct: 172 YRAPELLLSSSRYTKA---IDIWSVGCIFAELLT-RKPL 206

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 59.7 bits (144), Expect = 9e-10
 Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 27/210 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-----------------EIESLGRLRHKHLV 406
           F+  + IG+G +G+VYK        E AA                 EI  +   +H ++V
Sbjct: 11  FELIQRIGSGTYGDVYKA-RNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIV 69

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
              G   R+  L +  ++   GSL  +   +    LS  Q   + +    GL YLH + +
Sbjct: 70  AYFGSYLRRDKLWICMEFCGGGSLQDIY--HVTGPLSESQIAYVSRETLQGLYYLHSKGK 127

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA---RT 523
              +HRD+K  N+L+  + + +L DFG++       I+   + +GT  ++APE+A   R 
Sbjct: 128 ---MHRDIKGANILLTDNGHVKLADFGVSAQIT-ATIAKRKSFIGTPYWMAPEVAAVERK 183

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           G  +   D++A G+  +E+A  + P+   H
Sbjct: 184 GGYNQLCDIWAVGITAIELAELQPPMFDLH 213

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 60.0 bits (145), Expect = 1e-09
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 32/202 (15%)

Query: 370 IGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQG 410
           IG G FG VY                         + ++   E++ L +L+H + +  +G
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
              ++    LV +Y    + D  L +     L   +   I  G   GL YLH      +I
Sbjct: 89  CYLKEHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMI 143

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL---ARTGKAS 527
           HRD+K+GN+L+      +L DFG A      K S   + VGT  ++APE+      G+  
Sbjct: 144 HRDIKAGNILLTEPGQVKLADFGSA-----SKSSPANSFVGTPYWMAPEVILAMDEGQYD 198

Query: 528 CSTDVFAYGVLLLEIATGRRPI 549
              DV++ G+  +E+A  + P+
Sbjct: 199 GKVDVWSLGITCIELAERKPPL 220

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 59.4 bits (144), Expect = 1e-09
 Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 47/289 (16%)

Query: 357 LYTATKGFKQSEVIGTGGFGEVYKGVL----PTRMREF--------AAEIE--------- 395
           +  +      S+++  G FG ++ G+L    P +  E         A+EI+         
Sbjct: 1   IAISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESC 60

Query: 396 SLGRLRHKHLVNLQGWCKRKRDLLLV-YDYIPNGSLDSLLFD------NENFVLSWEQRF 448
            L  L H++++ +   C    +   V Y Y+  G+L   L        N    LS +Q  
Sbjct: 61  LLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLV 120

Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTT 507
           ++   IA G+ YLH+   + VIH+D+ + N +ID ++  ++ D  L+R LF         
Sbjct: 121 HMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGD 177

Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP-IDSDHFILVDWVLEFQH 565
           N    + ++A E     + S ++DV+++GVLL E+ T G+ P ++ D F +  ++ +   
Sbjct: 178 NENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYR 237

Query: 566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           L Q ++  D          E+  V+     C     E RP+  Q+++ L
Sbjct: 238 LAQPINCPD----------ELFAVM---ACCWALDPEERPSFSQLVQCL 273

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 59.2 bits (143), Expect = 2e-09
 Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 7/155 (4%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  L+H ++V L       + L LV++Y+ +  L   + D  N ++S       + 
Sbjct: 54  EVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYL-DKDLKQYMDDCGN-IMSMHNVKIFLY 111

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            I  GL Y H    + V+HRD+K  N+LI+     +L DFGLAR       +++  VV T
Sbjct: 112 QILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV-T 167

Query: 513 IGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           + Y  P+ L  + + S   D++  G +  E+A+GR
Sbjct: 168 LWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 58.7 bits (142), Expect = 3e-09
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 19/159 (11%)

Query: 393 EIESLGRLRHKHLVNLQG-WCKRKRDLLLVYDYIPNGSLDSLLFD---NENFVLSWEQRF 448
           E++ L  LRH+++++L   +     D+  V + +    L  LL      + F+    Q F
Sbjct: 59  ELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGT-DLHRLLTSRPLEKQFI----QYF 113

Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN 508
             +  I  GL Y+H      V+HRD+K  N+LI+ + + ++ DFGLAR+ D       T 
Sbjct: 114 --LYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQDP----QMTG 164

Query: 509 VVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGR 546
            V T  Y APE+  T  K     D+++ G +  E+  G+
Sbjct: 165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 58.1 bits (140), Expect = 4e-09
 Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 51/282 (18%)

Query: 370 IGTGGFGEVYKGV--------LPTRMR--------------EFAAEIESLGRLRHKHLVN 407
           +G G FG VY+G           TR+               EF  E   +      H+V 
Sbjct: 14  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNEN----FVLSWEQRFNIIKGIAAGLL 459
           L G   + +  L+V + + +G L S L     + EN       + ++   +   IA G+ 
Sbjct: 74  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 133

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+    +  +HRD+ + N ++  D   ++GDFG+ R +++          +  + ++AP
Sbjct: 134 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 190

Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVD--P 575
           E  + G  + S+D++++GV+L EI +   +P      +  + VL+F   G  LD  D  P
Sbjct: 191 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKFVMDGGYLDQPDNCP 247

Query: 576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
                      E V  L  +C     + RPT  +++  L  D
Sbjct: 248 -----------ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 58.0 bits (140), Expect = 4e-09
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 17/168 (10%)

Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL---------FDNEN 439
           +F  EI+ + RL+  +++ L   C     L ++ +Y+ NG L+  L            + 
Sbjct: 65  DFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADV 124

Query: 440 FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LF 498
             +S+     +   IA+G+ YL        +HRD+ + N L+  +   ++ DFG++R L+
Sbjct: 125 VTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLY 181

Query: 499 --DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
             D+ +I      V  I +++ E    GK + ++DV+A+GV L EI T
Sbjct: 182 SGDYYRIQ--GRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 58.5 bits (141), Expect = 4e-09
 Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 29/223 (13%)

Query: 356 DLYTATKGFKQSEVIGTGGFGEV----YKGVLPTRMREFAAEIESLGR------------ 399
           DL    + ++  +VIG G FGEV    +K        +  ++ E + R            
Sbjct: 37  DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 96

Query: 400 ---LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA 456
                   +V L    +  R L +V +Y+P G L +L+  N +    W + +      A 
Sbjct: 97  MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYT-----AE 150

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
            +L L        IHRDVK  N+L+D   + +L DFG     +   +      VGT  YI
Sbjct: 151 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 210

Query: 517 APELART----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           +PE+ ++    G      D ++ GV L E+  G  P  +D  +
Sbjct: 211 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 253

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 58.3 bits (141), Expect = 4e-09
 Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 33/210 (15%)

Query: 369 VIGTGGFGEVY--------------------KGVLPTRMREFA---AEIESLGRLRHKHL 405
           V+G GG+G+V+                    K  +    ++ A   AE   L  ++H  +
Sbjct: 3   VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI 62

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V+L    +    L L+ +Y+  G L   L + E   +     F + + I+  L +LH+  
Sbjct: 63  VDLIYAFQTGGKLYLILEYLSGGELFMHL-EREGIFMEDTACFYLSE-ISLALEHLHQ-- 118

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH-GKISHTTNVVGTIGYIAPE-LART 523
            Q +I+RD+K  N+L+DA  + +L DFGL +   H G ++HT    GTI Y+APE L R+
Sbjct: 119 -QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHT--FCGTIEYMAPEILMRS 175

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           G    + D ++ G L+ ++ TG  P  +++
Sbjct: 176 GHGK-AVDWWSLGALMYDMLTGAPPFTAEN 204

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 57.8 bits (139), Expect = 5e-09
 Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 23/203 (11%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHL 405
           K + + E IG G  G V+  +     +E A                 EI  +  L++ ++
Sbjct: 19  KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI 78

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           VN         +L +V +Y+  GSL  ++ +     +   Q   + +     L +LH   
Sbjct: 79  VNFLDSFLVGDELFVVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHA-- 133

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              VIHRD+KS NVL+  D + +L DFG        + S  + +VGT  ++APE+     
Sbjct: 134 -NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKA 191

Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
                D+++ G++ +E+  G  P
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 58.3 bits (141), Expect = 5e-09
 Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 32/215 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI----ESLGR-----LRHKHLVNLQGWCK- 413
           F+  +VIG G FGEV    +    + +A +I    E L R      R +  V + G  + 
Sbjct: 3   FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRW 62

Query: 414 ---------RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
                     + +L LV DY   G L +LL   E+ +     RF +    A  +L +   
Sbjct: 63  ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYL----AEMVLAIDSV 118

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFG-LARLFDHGKISHTTNV-VGTIGYIAPELAR 522
            +   +HRD+K  NVL+D + + RL DFG   RL   G +   +NV VGT  YI+PE+ +
Sbjct: 119 HQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ--SNVAVGTPDYISPEILQ 176

Query: 523 -----TGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
                 G+     D ++ GV + E+  G  P  ++
Sbjct: 177 AMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 58.3 bits (141), Expect = 5e-09
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 15/106 (14%)

Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL---- 497
           L  +Q   I K I  GL YLH    Q +IHRDVK+ N+ I+      +GD G A+     
Sbjct: 154 LPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210

Query: 498 -FDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
               G       + GT+   APE+    K +   D+++ G++L E+
Sbjct: 211 PAFLG-------LAGTVETNAPEVLARDKYNSKADIWSAGIVLFEM 249

Length = 357

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 59.4 bits (144), Expect = 5e-09
 Identities = 59/230 (25%), Positives = 89/230 (38%), Gaps = 60/230 (26%)

Query: 370 IGTGGFGEVYKGVLPT--------RMREFAAEIESLGR-----------LRHKHLVNLQG 410
           IG GG GEVY    P         ++RE  +E   L +           L H  +V +  
Sbjct: 10  IGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYS 69

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR---------------FNIIKGIA 455
            C     +     YI   +L SLL         W++                 +I   I 
Sbjct: 70  ICSDGDPVYYTMPYIEGYTLKSLLKS------VWQKESLSKELAEKTSVGAFLSIFHKIC 123

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL------------FDHGKI 503
           A + Y+H    + V+HRD+K  N+L+       + D+G A               D   I
Sbjct: 124 ATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNI 180

Query: 504 SHTT-----NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
            +++      +VGT  Y+APE      AS STD++A GV+L ++ T   P
Sbjct: 181 CYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP 230

Length = 932

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 56.9 bits (137), Expect = 7e-09
 Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 29/202 (14%)

Query: 370 IGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHLVNLQ 409
           +G+G FG V KG+                     P    E   E   + +L + ++V + 
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
           G C+ +   +LV +    G L+  L  N++  ++ +    ++  ++ G+ YL E      
Sbjct: 63  GICEAE-SWMLVMELAELGPLNKFLQKNKH--VTEKNITELVHQVSMGMKYLEE---TNF 116

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGKAS 527
           +HRD+ + NVL+     A++ DFGL++     +  +     G   + + APE     K S
Sbjct: 117 VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFS 176

Query: 528 CSTDVFAYGVLLLE-IATGRRP 548
             +DV+++GVL+ E  + G++P
Sbjct: 177 SKSDVWSFGVLMWEAFSYGQKP 198

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 57.0 bits (137), Expect = 8e-09
 Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 7/147 (4%)

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H+++V++        +L +V +++  G+L  ++       ++ EQ   +   +   L YL
Sbjct: 78  HENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYL 134

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H    Q VIHRD+KS ++L+ +D   +L DFG        ++    ++VGT  ++APE+ 
Sbjct: 135 HN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVPKRKSLVGTPYWMAPEVI 190

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
                    D+++ G++++E+  G  P
Sbjct: 191 SRLPYGTEVDIWSLGIMVIEMIDGEPP 217

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 56.9 bits (137), Expect = 1e-08
 Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 48/221 (21%)

Query: 369 VIGTGGFGEVYKGVL----------------------PTRMREFAAEIESLGRLRHKHLV 406
            +G G FG+V K                          + +R+  +E   L ++ H H++
Sbjct: 7   TLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVI 66

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLL----------------------FDNENFVLSW 444
            L G C +   LLL+ +Y   GSL S L                       + +   L+ 
Sbjct: 67  KLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTM 126

Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKI 503
               +    I+ G+ YL E     ++HRD+ + NVL+      ++ DFGL+R +++    
Sbjct: 127 GDLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY 183

Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              +     + ++A E       +  +DV+++GVLL EI T
Sbjct: 184 VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 56.7 bits (136), Expect = 1e-08
 Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 23/203 (11%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKR----- 416
           K + + E IG G  G VY  +     +E A +  +L +   K L+  +    R+      
Sbjct: 19  KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNI 78

Query: 417 -----------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                      +L +V +Y+  GSL  ++ +     +   Q   + +     L +LH   
Sbjct: 79  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHS-- 133

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              VIHRD+KS N+L+  D + +L DFG        + S  + +VGT  ++APE+     
Sbjct: 134 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKA 191

Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
                D+++ G++ +E+  G  P
Sbjct: 192 YGPKVDIWSLGIMAIEMVEGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 50/213 (23%)

Query: 364 FKQSEVIGTGGFGEVYKG----------VLPTRMRE-----FAA--EIESLGRLRHKHLV 406
           +++ E +G G +  VYKG          +   R++E     F A  E   L  L+H ++V
Sbjct: 7   YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIV 66

Query: 407 NLQGWCKRKRDLLLVYDYI-----------PNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
            L      K  L LV++Y+           P G    L  +N    L     F +++G++
Sbjct: 67  LLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGG----LHPENVKLFL-----FQLLRGLS 117

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIG 514
               Y+H+ +   ++HRD+K  N+LI      +L DFGLAR       SHT +N V T+ 
Sbjct: 118 ----YIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARA--KSVPSHTYSNEVVTLW 168

Query: 515 YIAPE--LARTGKASCSTDVFAYGVLLLEIATG 545
           Y  P+  L  T  ++C  D++  G + +E+  G
Sbjct: 169 YRPPDVLLGSTEYSTC-LDMWGVGCIFVEMIQG 200

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 56.3 bits (135), Expect = 2e-08
 Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 23/203 (11%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKR----- 416
           K + + E IG G  G VY  +     +E A    +L +   K L+  +    R+      
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79

Query: 417 -----------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                      +L +V +Y+  GSL  ++ +     +   Q   + +     L +LH   
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS-- 134

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              VIHRD+KS N+L+  D + +L DFG        + S  + +VGT  ++APE+     
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKA 192

Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
                D+++ G++ +E+  G  P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 56.2 bits (136), Expect = 2e-08
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 14/98 (14%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
           GL Y+H      V+HRD+K  N+L++A+ + ++ DFGLAR     K    T  V T  Y 
Sbjct: 120 GLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-EKGDFMTEYVVTRWYR 175

Query: 517 APELARTGKASCS-----TDVFAYGVLLLEIATGRRPI 549
           APEL      +CS      DV++ G +  E+  GR+P+
Sbjct: 176 APELL----LNCSEYTTAIDVWSVGCIFAEL-LGRKPL 208

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 55.5 bits (134), Expect = 2e-08
 Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 52/215 (24%)

Query: 364 FKQSEVIGTGGFGEVYKG----------VLPTRMRE-----FAA--EIESLGRLRHKHLV 406
           +K+ + +G G +  VYKG          +   R+       F A  E   L  L+H ++V
Sbjct: 7   YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIV 66

Query: 407 NLQGWCKRKRDLLLVYDYI-----------PNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
            L      K+ L LV++Y+             G    L   N    L     F +++G+A
Sbjct: 67  TLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGG----LSMHNVRLFL-----FQLLRGLA 117

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI--SHT-TNVVGT 512
               Y H+   + V+HRD+K  N+LI      +L DFGLAR     K   S T +N V T
Sbjct: 118 ----YCHQ---RRVLHRDLKPQNLLISERGELKLADFGLAR----AKSVPSKTYSNEVVT 166

Query: 513 IGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           + Y  P+ L  + + S S D++  G +  E+ATGR
Sbjct: 167 LWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 55.8 bits (135), Expect = 3e-08
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 7/99 (7%)

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD--HGKISHTTNVVG 511
           I  GL Y+H      V+HRD+K  N+L++ + + ++ DFGLAR+ D  H      T  V 
Sbjct: 115 ILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVA 171

Query: 512 TIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPI 549
           T  Y APE+    K  + + D+++ G +L E+ +  RP+
Sbjct: 172 TRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSN-RPL 209

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 48/234 (20%)

Query: 370 IGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLRHKHLVN 407
           IG G +G VYK                      G+  + +RE A  ++ L    H ++V 
Sbjct: 8   IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVAL-LKRLEAFDHPNIVR 66

Query: 408 LQGWC-----KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
           L   C      R+  + LV++++ +  L + L       L  E   ++++    GL +LH
Sbjct: 67  LMDVCATSRTDRETKVTLVFEHV-DQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
                 ++HRD+K  N+L+ +    +L DFGLAR++        T VV T+ Y APE+  
Sbjct: 126 A---NCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA--LTPVVVTLWYRAPEVLL 180

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPI---DSDHFILVDWVLEFQHLGQVLDVV 573
               +   D+++ G +  E+   R+P+   +S          E   LG++ D++
Sbjct: 181 QSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS----------EADQLGKIFDLI 223

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 55.5 bits (134), Expect = 3e-08
 Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 15/136 (11%)

Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L +V +++  G+L  ++       ++ EQ   +   +   L +LH    Q VIHRD+KS
Sbjct: 90  ELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLAVLKALSFLHA---QGVIHRDIKS 143

Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTT----NVVGTIGYIAPELARTGKASCSTDV 532
            ++L+ +D   +L DFG        ++S       ++VGT  ++APE+          D+
Sbjct: 144 DSILLTSDGRVKLSDFGFC-----AQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDI 198

Query: 533 FAYGVLLLEIATGRRP 548
           ++ G++++E+  G  P
Sbjct: 199 WSLGIMVIEMVDGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 55.9 bits (134), Expect = 3e-08
 Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 23/178 (12%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E   L   RH  L +L+   + K  L  V +Y+  G L         F LS E+ F+  +
Sbjct: 45  ESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL--------FFHLSRERVFSEDR 96

Query: 453 G------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
                  I + L YLH      +++RD+K  N+++D D + ++ DFGL +    G     
Sbjct: 97  TRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCK---EGITDAA 150

Query: 507 T--NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
           T     GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 208

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 55.7 bits (134), Expect = 3e-08
 Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 12/160 (7%)

Query: 392 AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII 451
           AE   L ++    +V L+   +    L LV  +I  G L    F +    L  E RF++ 
Sbjct: 42  AERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL----FHH----LQREGRFDLS 93

Query: 452 KG---IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN 508
           +     A  L  L    +  VI+RD+K  N+L+D   +  L DFGL +L +      T  
Sbjct: 94  RARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKL-NMKDDDKTNT 152

Query: 509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
             GT  Y+APEL      + + D +  GVLL E+ TG  P
Sbjct: 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPP 192

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 55.8 bits (134), Expect = 3e-08
 Identities = 65/253 (25%), Positives = 98/253 (38%), Gaps = 76/253 (30%)

Query: 364 FKQSEVIGTGGFGEVYKG-------------------VLPTRMREFAAEIESLGRLRHKH 404
           F + + +G G FGEV                      +L  ++    AE + L    ++ 
Sbjct: 3   FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW 62

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +V L    + K +L  V DYIP G + SLL     F     + +  I  +   +  +H+ 
Sbjct: 63  VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFY--IAELTCAVESVHK- 119

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF------------DHGK---------- 502
                IHRD+K  N+LID D + +L DFGL   F            DH +          
Sbjct: 120 --MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEW 177

Query: 503 --------------------------ISHTTNVVGTIGYIAPE-LARTGKASCSTDVFAY 535
                                     ++H+  +VGT  YIAPE L RTG      D ++ 
Sbjct: 178 GDPANCRCGDRLKPLERRAARQHQRCLAHS--LVGTPNYIAPEVLLRTGYTQL-CDWWSV 234

Query: 536 GVLLLEIATGRRP 548
           GV+L E+  G+ P
Sbjct: 235 GVILYEMLVGQPP 247

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 55.4 bits (134), Expect = 4e-08
 Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 52/233 (22%)

Query: 364 FKQSEVIGTGGFGEVY-------------KGVLPTRMREF------AAEIESLGRLRHKH 404
           FK+ +++G G  G V+             K +    M +         E E L  L H  
Sbjct: 3   FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPF 62

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ-RFNIIKGIAAGLLYLHE 463
           L  L    + +  L LV DY P G L  LL       LS E  RF   + + A L YLH 
Sbjct: 63  LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLA-LEYLHL 121

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGL---------ARLFDHGKISHTTNV----- 509
                +++RD+K  N+L+    +  L DF L                K S  ++V     
Sbjct: 122 ---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPS 178

Query: 510 --------------VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
                         VGT  YIAPE+        + D +  G+LL E+  G  P
Sbjct: 179 ETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP 231

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 55.0 bits (132), Expect = 4e-08
 Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 7/148 (4%)

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +H+++V +        +L +V +++  G+L  ++       ++ EQ   +   +   L  
Sbjct: 75  QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLKALSV 131

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           LH    Q VIHRD+KS ++L+  D   +L DFG        ++    ++VGT  ++APEL
Sbjct: 132 LHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKSLVGTPYWMAPEL 187

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRP 548
                     D+++ G++++E+  G  P
Sbjct: 188 ISRLPYGPEVDIWSLGIMVIEMVDGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 54.7 bits (131), Expect = 5e-08
 Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 27/204 (13%)

Query: 370 IGTGGFGEVYKGVLPTRMREFAA-----------------EIESLGRLRHKHLVNLQGWC 412
           +G+G +G+VYK        E AA                 EI  +   +H ++V   G  
Sbjct: 17  VGSGTYGDVYKA-RNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSY 75

Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHR 472
             +  L +  +Y   GSL  +   +    LS  Q   + +    GL YLH + +   +HR
Sbjct: 76  LSREKLWICMEYCGGGSLQDIY--HVTGPLSELQIAYVCRETLQGLAYLHSKGK---MHR 130

Query: 473 DVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA---RTGKASCS 529
           D+K  N+L+  + + +L DFG+A       I+   + +GT  ++APE+A   + G  +  
Sbjct: 131 DIKGANILLTDNGDVKLADFGVAAKIT-ATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQL 189

Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D++A G+  +E+A  + P+   H
Sbjct: 190 CDIWAVGITAIELAELQPPMFDLH 213

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 54.9 bits (132), Expect = 5e-08
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 11/135 (8%)

Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQR--FNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           DL LV DY+  G L   L     F    E R  F I + + A L +LH+     +++RD+
Sbjct: 70  DLYLVTDYMSGGELFWHLQKEGRFS---EDRAKFYIAELVLA-LEHLHK---YDIVYRDL 122

Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA-SCSTDVF 533
           K  N+L+DA  +  L DFGL++  +      T    GT  Y+APE+    K  +   D +
Sbjct: 123 KPENILLDATGHIALCDFGLSKA-NLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFW 181

Query: 534 AYGVLLLEIATGRRP 548
           + GVL+ E+  G  P
Sbjct: 182 SLGVLVFEMCCGWSP 196

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 54.6 bits (131), Expect = 6e-08
 Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 20/169 (11%)

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------I 454
           RH  L  L+   +    L  V +Y   G L         F LS E+ F+  +       I
Sbjct: 53  RHPFLTALKYSFQTHDRLCFVMEYANGGEL--------FFHLSRERVFSEDRARFYGAEI 104

Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTI 513
            + L YLH E    V++RD+K  N+++D D + ++ DFGL +     G    T    GT 
Sbjct: 105 VSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTP 160

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
            Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 161 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 209

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 54.8 bits (132), Expect = 6e-08
 Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 25/175 (14%)

Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG--- 453
           L   RH  L  L+   +    L  V +Y   G L    F    F LS E+ F+  +    
Sbjct: 49  LQNTRHPFLTALKYSFQTHDRLCFVMEYANGGEL----F----FHLSRERVFSEDRARFY 100

Query: 454 ---IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH---TT 507
              I + L YLH      V++RD+K  N+++D D + ++ DFGL +      IS      
Sbjct: 101 GAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCK----EGISDGATMK 153

Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
              GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 208

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 55.4 bits (133), Expect = 6e-08
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 20/167 (11%)

Query: 392 AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN-- 449
           +E+  L    H  +V      K    LLL+ +Y   G L+  +          +QR    
Sbjct: 114 SELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQI----------KQRLKEH 163

Query: 450 -IIKGIAAGLLY------LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHG 501
              +    GLL+      L E   + ++HRD+KS N+ +      +LGDFG ++ + D  
Sbjct: 164 LPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223

Query: 502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
            +   ++  GT  Y+APEL    + S   D+++ GV+L E+ T  RP
Sbjct: 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRP 270

Length = 478

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 54.2 bits (130), Expect = 6e-08
 Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 12/156 (7%)

Query: 393 EIESLGR-LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII 451
           E  S+ R + HKH+V L G C R  + ++V +++  G LD L    ++ VL+   +F + 
Sbjct: 53  ETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLD-LFMHRKSDVLTTPWKFKVA 111

Query: 452 KGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDHG---KISHTT 507
           K +A+ L YL    ++ ++H +V + N+L+  + ++   G F   +L D G    +    
Sbjct: 112 KQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPF--IKLSDPGIPITVLSRQ 166

Query: 508 NVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEI 542
             V  I +IAPE     K  S + D +++G  L EI
Sbjct: 167 ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 54.2 bits (130), Expect = 7e-08
 Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 6/155 (3%)

Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L  L+H  LV L    +    L  V DY+  G L       E   L    RF   + +A+
Sbjct: 50  LKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGEL-FFHLQRERCFLEPRARFYAAE-VAS 107

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
            + YLH      +I+RD+K  N+L+D+  +  L DFGL +     +   T+   GT  Y+
Sbjct: 108 AIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTSTFCGTPEYL 163

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRPIDS 551
           APE+ R      + D +  G +L E+  G  P  S
Sbjct: 164 APEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS 198

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 53.9 bits (129), Expect = 7e-08
 Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 46/245 (18%)

Query: 368 EVIGTGGFGEVYKGVLP--------------------TRMREFAAEIESLGRLRHKHLVN 407
           + +G G FG V +G L                     + M +F +E   +    H +++ 
Sbjct: 5   KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMR 64

Query: 408 LQGWCKRKRDL------LLVYDYIPNGSLDSLLF----DNENFVLSWEQRFNIIKGIAAG 457
           L G C +  +       +++  ++ +G L S L      +    L  +     +  IA+G
Sbjct: 65  LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR------LFDHGKISHTTNVVG 511
           + YL     +  IHRD+ + N +++ +MN  + DFGL++       +  G+I+       
Sbjct: 125 MEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKM----- 176

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDS-DHFILVDWVLEFQHLGQV 569
            + +IA E       +  +DV+++GV + EIAT G+ P    ++  + D++ +   L Q 
Sbjct: 177 PVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQP 236

Query: 570 LDVVD 574
            D +D
Sbjct: 237 PDCLD 241

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 54.0 bits (130), Expect = 8e-08
 Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 64/226 (28%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFA-----AEIES 396
           +++ E IG G +G+VYK                      G+ PT +RE +     +E   
Sbjct: 3   YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIY 62

Query: 397 LGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-------- 447
           + RL   +H+    G    K  L LV++Y     LDS   D + F+ S  +         
Sbjct: 63  IVRLLDVEHVEEKNG----KPSLYLVFEY-----LDS---DLKKFMDSNGRGPGRPLPAK 110

Query: 448 ------FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDH 500
                 + ++KG+A    + H+     V+HRD+K  N+L+D      ++ D GL R F  
Sbjct: 111 TIKSFMYQLLKGVA----HCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSI 163

Query: 501 GKISHTTNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATG 545
              S+T  +V T+ Y APE L  +   S   D+++ G +  E++  
Sbjct: 164 PVKSYTHEIV-TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRK 208

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 23/178 (12%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E   L   RH  L  L+   +    L  V +Y   G L         F LS E+ F   +
Sbjct: 45  ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--------FFHLSRERVFTEER 96

Query: 453 G------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
                  I + L YLH    + V++RD+K  N+++D D + ++ DFGL +    G     
Sbjct: 97  ARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGA 150

Query: 507 T--NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
           T     GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 208

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 54.4 bits (131), Expect = 1e-07
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           I  GL YLH      ++HRD+K GN+L++++   ++ DFGLAR+ +  +  H T  V T 
Sbjct: 112 ILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQ 168

Query: 514 GYIAPELARTGKA--SCSTDVFAYGVLLLEIATGR 546
            Y APE+   G    + + D+++ G +  E+   R
Sbjct: 169 YYRAPEIL-MGSRHYTSAVDIWSVGCIFAELLGRR 202

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 54.2 bits (130), Expect = 1e-07
 Identities = 72/253 (28%), Positives = 99/253 (39%), Gaps = 76/253 (30%)

Query: 364 FKQSEVIGTGGFGEV------------------YKGVLP-TRMREFAAEIESLGRLRHKH 404
           F + + +G G FGEV                   K VL   ++    AE + L    ++ 
Sbjct: 3   FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEW 62

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF--VLSWEQRFNIIKGIAAGLLYLH 462
           +V L    + K +L  V DYIP G + SLL   E F  VL+   RF I    A   L + 
Sbjct: 63  VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLA---RFYI----AELTLAIE 115

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-------HGKISHTT-------- 507
              +   IHRD+K  N+LID D + +L DFGL   F        + K SH          
Sbjct: 116 SVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSD 175

Query: 508 -------------------------------NVVGTIGYIAPE-LARTGKASCSTDVFAY 535
                                          ++VGT  YIAPE L R G      D ++ 
Sbjct: 176 LWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQL-CDWWSV 234

Query: 536 GVLLLEIATGRRP 548
           GV+L E+  G+ P
Sbjct: 235 GVILFEMLVGQPP 247

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 53.9 bits (130), Expect = 1e-07
 Identities = 67/247 (27%), Positives = 99/247 (40%), Gaps = 65/247 (26%)

Query: 364 FKQSEVIGTGGFGEV-------------YKGVLPTRMRE------FAAEIESLGRLRHKH 404
           F+  +VIG G FGEV              K +  + M E        AE + L    +  
Sbjct: 3   FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPW 62

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +V L    + +  L L+ +Y+P G + +LL   + F    E RF I    A  +L +   
Sbjct: 63  VVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEE-ETRFYI----AETILAIDSI 117

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGL------------ARLFDHGKISHTT----- 507
            +   IHRD+K  N+L+DA  + +L DFGL             R+  H   S+       
Sbjct: 118 HKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISK 177

Query: 508 --------------------NVVGTIGYIAPE-LARTG-KASCSTDVFAYGVLLLEIATG 545
                               + VGT  YIAPE   +TG    C  D ++ GV++ E+  G
Sbjct: 178 PMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKEC--DWWSLGVIMYEMLVG 235

Query: 546 RRPIDSD 552
             P  SD
Sbjct: 236 YPPFCSD 242

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 24/188 (12%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIES---LGRLRHKHLVNLQGWCKRKRDLLLVYDY 424
           +++G G    V   VL +  R+  A  E+   + +L HKHLV L G C R  + ++V +Y
Sbjct: 23  DIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDEN-IMVEEY 81

Query: 425 IPNGSLDSLLFDNENFV-LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVL-ID 482
           +  G LD  L   +N V L W  + ++ K +A+ L YL    ++ ++H +V   N+L   
Sbjct: 82  VKFGPLDVFLHREKNNVSLHW--KLDVAKQLASALHYLE---DKKLVHGNVCGKNILVAR 136

Query: 483 ADMN------ARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST--DVFA 534
             +N       +L D G+        +      V  I +IAPE  R G+AS +   D ++
Sbjct: 137 YGLNEGYVPFIKLSDPGIPI-----TVLSREERVERIPWIAPECIRNGQASLTIAADKWS 191

Query: 535 YGVLLLEI 542
           +G  LLEI
Sbjct: 192 FGTTLLEI 199

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 53.6 bits (129), Expect = 1e-07
 Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 35/211 (16%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLRHKH 404
           +K  EVIG G +G V   +  T   E  A                   EI+ L  LRH  
Sbjct: 2   YKIQEVIGKGSYGVVCSAI-DTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD 60

Query: 405 LVNLQGW----CKRK-RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
           +V ++       +R+ +D+ +V++ +    L  ++  N++      Q F  +  +   L 
Sbjct: 61  IVEIKHIMLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHHQFF--LYQLLRALK 117

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR--LFDHGKISHTTNVVGTIGYIA 517
           Y+H      V HRD+K  N+L +AD   ++ DFGLAR    D       T+ V T  Y A
Sbjct: 118 YIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 174

Query: 518 PELART--GKASCSTDVFAYGVLLLEIATGR 546
           PEL  +   K + + D+++ G +  E+ TG+
Sbjct: 175 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 44/220 (20%)

Query: 368 EVIGTGGFGEVYK------GVL-------PTRM--REFAAEIESLGRL-RHKHLVNLQGW 411
           E IG G +G+VYK      G L       P      E  AE   L  L  H ++V   G 
Sbjct: 28  ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGM 87

Query: 412 CKRKR-----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLLY 460
             +        L LV +    GS+  L+      +L   QR +      I+ G   GL +
Sbjct: 88  FYKADKLVGGQLWLVLELCNGGSVTELV----KGLLICGQRLDEAMISYILYGALLGLQH 143

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           LH      +IHRDVK  N+L+  +   +L DFG++      ++   T+ VGT  ++APE+
Sbjct: 144 LHN---NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS-VGTPFWMAPEV 199

Query: 521 ARTGK-------ASCSTDVFAYGVLLLEIATGRRPIDSDH 553
               +       A C  DV++ G+  +E+  G  P+   H
Sbjct: 200 IACEQQYDYSYDARC--DVWSLGITAIELGDGDPPLFDMH 237

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 52.6 bits (126), Expect = 2e-07
 Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 15/176 (8%)

Query: 385 TRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL------LLVYDYIPNGSLDSLLF--- 435
           + + EF  E   +    H +++ L G   R R        +++  ++ +G L + L    
Sbjct: 43  SDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSR 102

Query: 436 -DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL 494
              E F L  +     +  IA+G+ YL     +  IHRD+ + N +++ +M   + DFGL
Sbjct: 103 IGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFGL 159

Query: 495 ARLFDHGKISHTTNVVG-TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           ++    G            + ++A E       +  +DV+A+GV + EI T G+ P
Sbjct: 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP 215

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 8/156 (5%)

Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L  ++H  LV L    +    L  V DYI  G L   L   E   L    RF   + IA+
Sbjct: 50  LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL-QRERCFLEPRARFYAAE-IAS 107

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGY 515
            L YLH      +++RD+K  N+L+D+  +  L DFGL +   +H     T+   GT  Y
Sbjct: 108 ALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GTTSTFCGTPEY 162

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS 551
           +APE+        + D +  G +L E+  G  P  S
Sbjct: 163 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 52.2 bits (125), Expect = 3e-07
 Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 48/235 (20%)

Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV-LSWEQRFNIIKGIA 455
           + ++ H HL  + G C R  + ++V +++ +G LD  L   +  V ++W  +  + + +A
Sbjct: 70  MSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KITVAQQLA 127

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLG----DFGLARLFDHGKISHTT---- 507
           + L YL    ++ ++H +V + N+L+     ARLG         +L D G +S T     
Sbjct: 128 SALSYLE---DKNLVHGNVCAKNILL-----ARLGLAEGTSPFIKLSDPG-VSFTALSRE 178

Query: 508 NVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIA-------TGRRPIDSDHFILVDW 559
             V  I +IAPE    G + S + D +++G  LLEI          R P + + F     
Sbjct: 179 ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF----- 233

Query: 560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
             E +H  ++ +     L +        L+ Q    C   +   RP+ R +LR L
Sbjct: 234 -YEKKH--RLPEPSCKELAT--------LISQ----CLTYEPTQRPSFRTILRDL 273

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 52.4 bits (125), Expect = 3e-07
 Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 58/242 (23%)

Query: 364 FKQSEVIGTGGFGEV---------YKGVLPTRMREFAAEIESLGRLRHKHLVNLQG---W 411
           F+  +VIG G FGEV         +   +    +    E E +G +R +  + ++    W
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW 62

Query: 412 CKR-------KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
             +       K +L L+ +++P G + +LL   +       Q +     IA  +L +   
Sbjct: 63  VVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFY-----IAETVLAIDSI 117

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLA------------RLFDHGKISHTT----- 507
            +   IHRD+K  N+L+D+  + +L DFGL             R  +H   S  T     
Sbjct: 118 HQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMN 177

Query: 508 -----------------NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID 550
                            + VGT  YIAPE+      +   D ++ GV++ E+  G  P  
Sbjct: 178 SKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237

Query: 551 SD 552
           S+
Sbjct: 238 SE 239

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 52.0 bits (124), Expect = 4e-07
 Identities = 59/232 (25%), Positives = 91/232 (39%), Gaps = 77/232 (33%)

Query: 370 IGTGGFGEVYK--------------------GVLPTRMREFAAEIESLGRLRHKHLVNLQ 409
           +G G +G VYK                    G+  +  RE A     L  L+H ++++LQ
Sbjct: 9   VGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIAL----LRELKHPNVISLQ 64

Query: 410 G--WCKRKRDLLLVYDY-----------------------IPNGSLDSLLFDNENFVLSW 444
                   R + L++DY                       +P G + SLL+         
Sbjct: 65  KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ-------- 116

Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR----LGDFGLARLFDH 500
                    I  G+ YLH  W   V+HRD+K  N+L+  +   R    + D G ARLF+ 
Sbjct: 117 ---------ILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164

Query: 501 --GKISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPI 549
               ++    VV T  Y APEL    +  + + D++A G +  E+ T   PI
Sbjct: 165 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPI 215

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 51.9 bits (124), Expect = 5e-07
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 8/91 (8%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
           GL Y+H      +IHRD+K GN+ ++ D   ++ DFGLAR  D    S  T  V T  Y 
Sbjct: 130 GLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQTD----SEMTGYVVTRWYR 182

Query: 517 APELARTGKASCST-DVFAYGVLLLEIATGR 546
           APE+         T D+++ G ++ E+ TG+
Sbjct: 183 APEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 51.6 bits (123), Expect = 5e-07
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 34/206 (16%)

Query: 370 IGTGGFGEVYKGVLP--TRMREFA--------------AEIESLGRLRHKHLVNLQG--W 411
           +G G +G VYK         +E+A               EI  L  L+H +++ LQ    
Sbjct: 9   VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFL 68

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLF------DNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
               R + L++DY  +     + F      + +   L      +++  I  G+ YLH  W
Sbjct: 69  SHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW 128

Query: 466 EQVVIHRDVKSGNVLIDADMNAR----LGDFGLARLFDH--GKISHTTNVVGTIGYIAPE 519
              V+HRD+K  N+L+  +   R    + D G ARLF+     ++    VV T  Y APE
Sbjct: 129 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 185

Query: 520 LARTGKA-SCSTDVFAYGVLLLEIAT 544
           L    +  + + D++A G +  E+ T
Sbjct: 186 LLLGARHYTKAIDIWAIGCIFAELLT 211

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 51.5 bits (123), Expect = 6e-07
 Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 28/202 (13%)

Query: 368 EVIGTGGFGEVY-----------------KGVLPTRMRE---FAAEIESLGRLRHKHLVN 407
           +VIG G FG+V                  K ++  R  +    A     L  ++H  LV 
Sbjct: 1   KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L    +    L  V D++  G L   L    +F      RF   + IA+ L YLH     
Sbjct: 61  LHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEP-RARFYAAE-IASALGYLHS---I 115

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-VGTIGYIAPELARTGKA 526
            +++RD+K  N+L+D+  +  L DFGL +  +    S TT    GT  Y+APE+ R    
Sbjct: 116 NIVYRDLKPENILLDSQGHVVLTDFGLCK--EGIAQSDTTTTFCGTPEYLAPEVIRKQPY 173

Query: 527 SCSTDVFAYGVLLLEIATGRRP 548
             + D +  G +L E+  G  P
Sbjct: 174 DNTVDWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 51.6 bits (123), Expect = 6e-07
 Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 58/242 (23%)

Query: 364 FKQSEVIGTGGFGEV---------YKGVLPTRMREFAAEIESLGRLRHKH--LVNLQG-W 411
           F+  +VIG G FGEV         +   +    +    E E +  +R +   LV   G W
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW 62

Query: 412 CKR-------KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
             +       KR+L L+ +++P G + +LL   +       Q +     IA  +L +   
Sbjct: 63  VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFY-----IAETVLAIDAI 117

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLA------------RLFDHGKISHTT----- 507
            +   IHRD+K  N+L+DA  + +L DFGL             R   H   S  +     
Sbjct: 118 HQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMN 177

Query: 508 -----------------NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID 550
                            + VGT  YIAPE+      +   D ++ GV++ E+  G  P  
Sbjct: 178 SKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237

Query: 551 SD 552
           S+
Sbjct: 238 SE 239

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 51.3 bits (123), Expect = 7e-07
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 13/104 (12%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFD--HGKISHTTNVVGTI 513
           GL Y+H      V+HRD+K  NV I+  D+  ++GDFGLAR+ D  +    + +  + T 
Sbjct: 126 GLKYIHS---ANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTK 182

Query: 514 GYIAPELART----GKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
            Y +P L  +     KA    D++A G +  E+ TG+      H
Sbjct: 183 WYRSPRLLLSPNNYTKA---IDMWAAGCIFAEMLTGKPLFAGAH 223

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 51.5 bits (123), Expect = 8e-07
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 3/97 (3%)

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           I + +   + YLHE     +IHRD+K+ N+ I+   +  LGDFG A        +     
Sbjct: 187 IERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGW 243

Query: 510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGR 546
            GTI   APEL        + D+++ G++L E+AT  
Sbjct: 244 AGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280

Length = 391

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 50.6 bits (121), Expect = 1e-06
 Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 29/158 (18%)

Query: 411 WC--KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
           +C  + KR L +V +Y+  G   +LL  N   +     R    + + A L YLH      
Sbjct: 67  FCSFETKRHLCMVMEYVEGGDCATLL-KNIGALPVDMARMYFAETVLA-LEYLHNYG--- 121

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-----------------VVG 511
           ++HRD+K  N+LI +  + +L DFGL+++   G +S TTN                 V G
Sbjct: 122 IVHRDLKPDNLLITSMGHIKLTDFGLSKI---GLMSLTTNLYEGHIEKDTREFLDKQVCG 178

Query: 512 TIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGRRP 548
           T  YIAPE + R G      D +A G++L E   G  P
Sbjct: 179 TPEYIAPEVILRQGYGK-PVDWWAMGIILYEFLVGCVP 215

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 62/234 (26%), Positives = 93/234 (39%), Gaps = 48/234 (20%)

Query: 370 IGTGGFG-----EVYKGVLPTRM--------------REFAAEIESLGRLRHKHLVNLQG 410
           IG G FG     EV  G  P ++               +F  E +    L+H +L+   G
Sbjct: 3   IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLL-----FDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
            C      LLV ++ P G L   L      +      +  QR  +   IA GLL+LH+  
Sbjct: 63  QCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQR--MACEIALGLLHLHK-- 118

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT-----IGYIAPEL 520
               IH D+   N L+ AD+  ++GD+GL+    H K      V        + +IAPEL
Sbjct: 119 -NNFIHSDLALRNCLLTADLTVKIGDYGLS----HNKYKEDYYVTPDQLWVPLRWIAPEL 173

Query: 521 AR-------TGKASCSTDVFAYGVL---LLEIATGRRPIDSDHFILVDWVLEFQ 564
                        +  ++V++ GV    L E+ +      SD  +L   V E Q
Sbjct: 174 VDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQ 227

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 50.4 bits (121), Expect = 1e-06
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           ++  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 123 LVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLARHTDD----EMTGY 175

Query: 510 VGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           V T  Y APE +      + + D+++ G ++ E+ TG+
Sbjct: 176 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
           GL Y+H      +IHRD+K  NV ++ D   R+ DFGLAR  D       T  V T  Y 
Sbjct: 130 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQAD----DEMTGYVATRWYR 182

Query: 517 APELARTGKASCST-DVFAYGVLLLEIATGRRPIDSDHFI 555
           APE+         T D+++ G ++ E+  G+     + +I
Sbjct: 183 APEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI 222

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 125 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 177

Query: 510 VGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGR 546
           V T  Y APE+       + + D+++ G ++ E+ TGR
Sbjct: 178 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 49.8 bits (119), Expect = 3e-06
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 15/96 (15%)

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV--GT----IGYIAPELART 523
           IHRDV + NVL+     A++ DFGLAR      I + +N V  G     + ++APE    
Sbjct: 234 IHRDVAARNVLLTDGRVAKICDFGLAR-----DIMNDSNYVVKGNARLPVKWMAPESIFD 288

Query: 524 GKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVD 558
              +  +DV++YG+LL EI + G+ P      ILV+
Sbjct: 289 CVYTVQSDVWSYGILLWEIFSLGKSPYPG---ILVN 321

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 49.1 bits (117), Expect = 3e-06
 Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 37/202 (18%)

Query: 370 IGTGGFGEV---------YKGVLPTRMREFAAEI------ESLGRLRHKHLVNLQGWCKR 414
           +G+G +G V          K  +    R F +EI        L  L+H    N+ G    
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82

Query: 415 K---------RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                     +D  LV  Y+    L  ++       LS ++   ++  +  GL Y+H   
Sbjct: 83  FTSAVSGDEFQDFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG 137

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              +IHRD+K GN+ ++ D   ++ DFGLAR  D    +  T  V T  Y APE+     
Sbjct: 138 ---IIHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRAPEVILNWM 190

Query: 526 ASCST-DVFAYGVLLLEIATGR 546
               T D+++ G ++ E+ TG+
Sbjct: 191 HYNQTVDIWSVGCIMAEMLTGK 212

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 48.4 bits (115), Expect = 5e-06
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 30/200 (15%)

Query: 368 EVIGTGGFGEVYKG------------VLPTRMRE---FAA--EIESLGRLRHKHLVNLQG 410
           E +G G +  VYKG            V+  +  E   F A  E   L  L+H ++V L  
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHD 70

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR---FNIIKGIAAGLLYLHEEWEQ 467
               K  L  V++Y+ +  L   +  +   +  +  R   F +++G+A    Y+H    Q
Sbjct: 71  IIHTKETLTFVFEYM-HTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLA----YIHG---Q 122

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTGKA 526
            ++HRD+K  N+LI      +L DFGLAR       ++++ VV T+ Y  P+ L      
Sbjct: 123 HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV-TLWYRPPDVLLGATDY 181

Query: 527 SCSTDVFAYGVLLLEIATGR 546
           S + D++  G + +E+  G+
Sbjct: 182 SSALDIWGAGCIFIEMLQGQ 201

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 48.9 bits (116), Expect = 6e-06
 Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 14/127 (11%)

Query: 422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI 481
           Y    +  + +LL D+ +  L+     +    +A G+ +L     +  +HRD+ + NVL+
Sbjct: 214 YKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLL 270

Query: 482 DADMNARLGDFGLARLFDHGKISHTTNVVGT------IGYIAPELARTGKASCSTDVFAY 535
                 ++ DFGLAR      I H +N V        + ++APE       +  +DV++Y
Sbjct: 271 AQGKIVKICDFGLAR-----DIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSY 325

Query: 536 GVLLLEI 542
           G+LL EI
Sbjct: 326 GILLWEI 332

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 48.5 bits (115), Expect = 6e-06
 Identities = 63/221 (28%), Positives = 94/221 (42%), Gaps = 46/221 (20%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA------------EIES----LGRLR-HKHLVNLQG 410
           E IG G +G+V+K VL  +    AA            EIE+    L  L  H ++V   G
Sbjct: 24  ETIGKGTYGKVFK-VLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYG 82

Query: 411 WCKRKR-----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLL 459
              +K       L LV +    GS+  L+       L   +R        I+     GL 
Sbjct: 83  MYYKKDVKNGDQLWLVLELCNGGSVTDLV----KGFLKRGERMEEPIIAYILHEALMGLQ 138

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           +LH       IHRDVK  N+L+  +   +L DFG++      ++   T+ VGT  ++APE
Sbjct: 139 HLHV---NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS-VGTPFWMAPE 194

Query: 520 -------LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
                  L  T  A C  DV++ G+  +E+  G  P+   H
Sbjct: 195 VIACEQQLDSTYDARC--DVWSLGITAIELGDGDPPLADLH 233

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 48.6 bits (116), Expect = 6e-06
 Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 30/173 (17%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQR 447
           E++ +  ++H++++ L        D+ +  D+I N  +D +  D     +    L+  Q 
Sbjct: 70  ELKIMNEIKHENIMGL-------VDVYVEGDFI-NLVMDIMASDLKKVVDRKIRLTESQV 121

Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT- 506
             I+  I  GL  LH+ +    +HRD+   N+ I++    ++ DFGLAR + +   S T 
Sbjct: 122 KCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTL 178

Query: 507 ------------TNVVGTIGYIAPELAR-TGKASCSTDVFAYGVLLLEIATGR 546
                       T+ V T+ Y APEL     K   + D+++ G +  E+ TG+
Sbjct: 179 SKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231

Length = 335

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 47.6 bits (113), Expect = 1e-05
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 18/106 (16%)

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT--NVVGTIGYIA 517
           Y+H E    +IHRD+K+ NVL++   +  LGDFG A  F  G  S      + GT+   A
Sbjct: 275 YIHGEG---IIHRDIKTENVLVNGPEDICLGDFG-AACFARGSWSTPFHYGIAGTVDTNA 330

Query: 518 PELARTGKASCSTDVFAYGVLLLEIAT------------GRRPIDS 551
           PE+      + S D+++ G+++ E A              RRP D+
Sbjct: 331 PEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDA 376

Length = 461

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 23/159 (14%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
           G+ Y+H+   + ++HRD+K+ N+ +  ++  ++GDFG++RL   G     T   GT  Y+
Sbjct: 118 GVHYMHQ---RRILHRDLKAKNIFLKNNL-LKIGDFGVSRLL-MGSCDLATTFTGTPYYM 172

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD-- 574
           +PE  +       +D+++ G +L E+       +  +F+ V           VL +V+  
Sbjct: 173 SPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSV-----------VLRIVEGP 221

Query: 575 -PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
            P+L  +Y   ++  ++Q  L   ++    RP+  ++LR
Sbjct: 222 TPSLPETY-SRQLNSIMQSML---NKDPSLRPSAAEILR 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 47.4 bits (112), Expect = 2e-05
 Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 47/241 (19%)

Query: 353 RYSDLYTATKGFKQSEVIGTGGFGEV------------------YKGVLPTRMREFAAEI 394
           +Y D  +    ++  + IG G FGEV                  Y+G+      +   E+
Sbjct: 4   KYDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEV 63

Query: 395 ESLGRLRHKHLVNL--QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR--FNI 450
             +  L+HK++V    +   K  + L ++ ++   G L   +          E+    +I
Sbjct: 64  NVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDI 123

Query: 451 IKGIAAGLLYLHEEWE----QVVIHRDVKSGNVL----------IDADMN-------ARL 489
            + +   L Y H   +    + V+HRD+K  N+           I A  N       A++
Sbjct: 124 TRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKI 183

Query: 490 GDFGLARLFDHGKISHTTNVVGTIGYIAPELA--RTGKASCSTDVFAYGVLLLEIATGRR 547
           GDFGL++      ++H+   VGT  Y +PEL    T      +D++A G ++ E+ +G+ 
Sbjct: 184 GDFGLSKNIGIESMAHS--CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKT 241

Query: 548 P 548
           P
Sbjct: 242 P 242

Length = 1021

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 45.8 bits (108), Expect = 4e-05
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 6/125 (4%)

Query: 422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI 481
           Y              NE+  LS+         +A G+ +L     +  +HRD+ + NVLI
Sbjct: 216 YLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLI 272

Query: 482 DADMNARLGDFGLAR--LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLL 539
                 ++ DFGLAR  + D   IS  +  +  + ++APE       +  +DV+++G+LL
Sbjct: 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFL-PLKWMAPESIFNNLYTTLSDVWSFGILL 331

Query: 540 LEIAT 544
            EI T
Sbjct: 332 WEIFT 336

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 46.0 bits (109), Expect = 5e-05
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 34/152 (22%)

Query: 370 IGTGGFGEVYKGVLPTRMREFA-------------------AEIESLGRLRHKHLVNLQG 410
           I  G FG+VY G      + +A                   AE ++L   +   +V+L  
Sbjct: 12  ISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYY 71

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLL-----FDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
             +   ++ LV +Y+  G + SLL     FD E  V         I  +A  L YLH   
Sbjct: 72  SLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAV-------KYISEVALALDYLHR-- 122

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARL 497
              +IHRD+K  N+LI  + + +L DFGL+++
Sbjct: 123 -HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 45.0 bits (106), Expect = 7e-05
 Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 34/212 (16%)

Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVL---------------PTRMREFAAEIESLGR 399
           +T  K ++Q + IG+G  G V   +  VL                T  +    E+  L  
Sbjct: 17  FTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC 76

Query: 400 LRHKHLVNL------QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
           + HK++++L      Q   +  +D+ LV +      +D+ L    +  L  E+   ++  
Sbjct: 77  VNHKNIISLLNVFTPQKSLEEFQDVYLVMEL-----MDANLCQVIHMELDHERMSYLLYQ 131

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           +  G+ +LH      +IHRD+K  N+++ +D   ++ DFGLAR      +   T  V T 
Sbjct: 132 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTR 186

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATG 545
            Y APE+        + D+++ G ++ E+  G
Sbjct: 187 YYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 44.6 bits (106), Expect = 9e-05
 Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 61/212 (28%)

Query: 370 IGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLR-HKHLVNLQG 410
           IG G F EV K     +  ++ A                  EI++L RL  H +++ L  
Sbjct: 7   IGEGTFSEVLK-AQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRL-- 63

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFD-----------------NENFVLSWEQRFNIIKG 453
                  + +++D    G L +L+F+                  E  V S+   + ++K 
Sbjct: 64  -------IEVLFD-RKTGRL-ALVFELMDMNLYELIKGRKRPLPEKRVKSY--MYQLLKS 112

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
               L ++H      + HRD+K  N+LI  D   +L DFG  R   + K  + T  + T 
Sbjct: 113 ----LDHMHRNG---IFHRDIKPENILIKDD-ILKLADFGSCRGI-YSKPPY-TEYISTR 162

Query: 514 GYIAPE-LARTGKASCSTDVFAYGVLLLEIAT 544
            Y APE L   G      D++A G +  EI +
Sbjct: 163 WYRAPECLLTDGYYGPKMDIWAVGCVFFEILS 194

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 44.8 bits (106), Expect = 1e-04
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 24/154 (15%)

Query: 364 FKQSEVIGTGGFGEV-------------YKGVLPTRM------REFAAEIESLGRLRHKH 404
           F   +VIG G FGEV              K +L + M          AE + L       
Sbjct: 3   FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPW 62

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +V+L    +  + L L+ +++P G L ++L   + F      RF +    A  +L +   
Sbjct: 63  VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSED-VTRFYM----AECVLAIEAV 117

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
            +   IHRD+K  N+LID   + +L DFGL+  F
Sbjct: 118 HKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGF 151

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 49/279 (17%)

Query: 370 IGTGGFG-----EVYKGVLPTR--MREFAAEIESLGR------------LRHKHLVNLQG 410
           IG G FG     E+Y      R  ++E  A   S  +            L+H +++   G
Sbjct: 3   IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG 62

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNE----NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            C      LLV++Y   G L S L   +    N  L   QR      IAAG+ ++H+   
Sbjct: 63  QCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMAC--EIAAGVTHMHK--- 117

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVGTIGYIAPELAR--- 522
              +H D+   N  + +D+  ++GD+G+    +    I    +    + ++APEL     
Sbjct: 118 HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFH 177

Query: 523 ----TGKASCSTDVFAYGVLLLEI---ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP 575
               T + +  ++V+A GV L E+   A       SD  +L   + + Q     + +  P
Sbjct: 178 GGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQ-----VKLFKP 232

Query: 576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            L   Y     E VLQ   L      E R T  +V R L
Sbjct: 233 QLELPYSERWYE-VLQFCWL----SPEKRATAEEVHRLL 266

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 43.1 bits (101), Expect = 4e-04
 Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 51/270 (18%)

Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVLP---------------TRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  +L                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79

Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK+++ L      ++ L    D YI    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAP 194

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
           E+        + D+++ G ++ E+  G                          V+ P  G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGG-------------------------VLFP--G 227

Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMR 608
           + ++    +++ QLG  C     + +PT+R
Sbjct: 228 TDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 43.0 bits (101), Expect = 4e-04
 Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 20/136 (14%)

Query: 434 LFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG 493
           + + +   L  E   +    +A G+ +L     +  IHRD+ + N+L+      ++ DFG
Sbjct: 203 ILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFG 259

Query: 494 LARLFDHGKISHTTNVVGT------IGYIAPELARTGKASCSTDVFAYGVLLLEIAT--- 544
           LAR      I + +N V        + ++APE       +  +DV++YG+LL EI +   
Sbjct: 260 LAR-----DIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS 314

Query: 545 ---GRRPIDSDHFILV 557
                 P+DS  + ++
Sbjct: 315 SPYPGMPVDSKFYKMI 330

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 42.8 bits (100), Expect = 4e-04
 Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 51/270 (18%)

Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVL---------------PTRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  VL                T  +    E+  +  
Sbjct: 13  FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 72

Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK++++L      ++ L    D Y+    +D+ L       L  E+   ++  +  G+
Sbjct: 73  VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 132

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 133 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAP 187

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
           E+        + D+++ G ++ E+          H IL                     G
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVR--------HKILFP-------------------G 220

Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMR 608
             Y+    +++ QLG  C     + +PT+R
Sbjct: 221 RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 41.6 bits (98), Expect = 0.001
 Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 19/169 (11%)

Query: 392 AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII 451
            EI +  +L+H +++          +L +V   +  GS + LL  +    L       I+
Sbjct: 48  QEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFIL 107

Query: 452 KGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGK-----ISH 505
           K +   L Y+H +     IHR VK+ ++L+  D    L     +  +  HGK        
Sbjct: 108 KDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164

Query: 506 TTNVVGTIGYIAPELAR------TGKASCSTDVFAYGVLLLEIATGRRP 548
             + V  + +++PE+ +        K    +D+++ G+   E+A G  P
Sbjct: 165 PKSSVKNLPWLSPEVLQQNLQGYNEK----SDIYSVGITACELANGHVP 209

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 41.2 bits (96), Expect = 0.001
 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 15/148 (10%)

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
           IHRD+ + N+L+  +   ++ DFGLAR ++         +    + ++APE       + 
Sbjct: 201 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 260

Query: 529 STDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVVAEM 586
            +DV+++GVLL EI + G  P        +D   EF + L +   +  P+    Y   EM
Sbjct: 261 QSDVWSFGVLLWEIFSLGASPYPGVK---IDE--EFCRRLKEGTRMRAPD----YTTPEM 311

Query: 587 ELVLQLGLLCSHQKAEARPTMRQVLRYL 614
               Q  L C H +   RPT  +++ +L
Sbjct: 312 ---YQTMLDCWHGEPSQRPTFSELVEHL 336

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 41.6 bits (97), Expect = 0.001
 Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 59/258 (22%)

Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA------------EIESLGRLRHKHLV 406
           +  K +K   +IG G FG VY+ +      + A             E+  +  L H +++
Sbjct: 63  SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINII 122

Query: 407 NLQGW----CKRKRD----LLLVYDYIP-------------NGSLDSLLFDNENFVLSWE 445
            L+ +    C +K +    L +V ++IP             N +L   L    ++ L   
Sbjct: 123 FLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQL--- 179

Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKIS 504
                       L Y+H ++   + HRD+K  N+LID + +  +L DFG A+    G+ S
Sbjct: 180 ---------CRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRS 227

Query: 505 HTTNVVGTIGYIAPELARTGKASCST--DVFAYGVLLLEIATGRRPIDSDHFILVDWVLE 562
              + + +  Y APEL   G  + +T  D+++ G ++ E+  G  PI S    +   V  
Sbjct: 228 --VSYICSRFYRAPELM-LGATNYTTHIDLWSLGCIIAEMILG-YPIFSGQSSVDQLVRI 283

Query: 563 FQHLG----QVLDVVDPN 576
            Q LG      L  ++PN
Sbjct: 284 IQVLGTPTEDQLKEMNPN 301

Length = 440

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 40.6 bits (95), Expect = 0.002
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
           IHRD+ + N+L+  +   ++ DFGLAR ++         +    + ++APE       + 
Sbjct: 195 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTT 254

Query: 529 STDVFAYGVLLLEIAT 544
            +DV+++GVLL EI +
Sbjct: 255 QSDVWSFGVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
           IHRD+ + N+L+  +   ++ DFGLAR ++         +    + ++APE       + 
Sbjct: 196 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTT 255

Query: 529 STDVFAYGVLLLEI 542
            +DV+++GVLL EI
Sbjct: 256 QSDVWSFGVLLWEI 269

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	670
cd06899	236	lectin_legume_LecRK_Arcelin_ConA legume lectins, l	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
PF00139	236	Lectin_legB: Legume lectin domain; InterPro: IPR00	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.98
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.98
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.98
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.98
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.98
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.98
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.98
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.98
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.98
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.98
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.98
KOG0610	459	consensus Putative serine/threonine protein kinase	99.98
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.98
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.98
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.98
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.98
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.98
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.98
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.98
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
KOG0586	596	consensus Serine/threonine protein kinase [General	99.97
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.97
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.96
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.96
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.96
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.96
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.96
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.96
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.96
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.96
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.95
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.94
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.94
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.94
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.94
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.94
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.94
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.93
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
KOG1152	772	consensus Signal transduction serine/threonine kin	99.93
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.93
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.92
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.91
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.91
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.91
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.89
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.89
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.85
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.85
cd07308	218	lectin_leg-like legume-like lectins: ERGIC-53, ERG	99.84
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.84
PRK09188	365	serine/threonine protein kinase; Provisional	99.84
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.81
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.81
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.73
PRK12274	218	serine/threonine protein kinase; Provisional	99.73
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.73
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.72
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.71
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.7
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.69
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.68
PRK10345	210	hypothetical protein; Provisional	99.66
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.66
cd06901	248	lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr	99.65
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.65
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.64
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.64
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.6
PRK14879	211	serine/threonine protein kinase; Provisional	99.59
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.56
cd06902	225	lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran	99.54
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.51
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.51
smart00090	237	RIO RIO-like kinase.	99.51
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.47
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.46
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.4
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.38
cd06903	215	lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem	99.33
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.3
PF03388	229	Lectin_leg-like: Legume-like lectin family; InterP	99.24
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.18
KOG1243	690	consensus Protein kinase [General function predict	99.08
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.05
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.95
KOG3087	229	consensus Serine/threonine protein kinase [General	98.84
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.79
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.75
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.75
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.74
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.72
KOG3839	351	consensus Lectin VIP36, involved in the transport	98.6
cd06900	255	lectin_VcfQ VcfQ bacterial pilus biogenesis protei	98.58
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.54
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.51
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.51
COG4248	637	Uncharacterized protein with protein kinase and he	98.41
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.39
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.28
PRK09902	216	hypothetical protein; Provisional	98.26
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.22
KOG3838	497	consensus Mannose lectin ERGIC-53, involved in gly	98.14
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.14
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.98
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.98
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.8
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.62
PF01636	239	APH: Phosphotransferase enzyme family This family	97.41
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.35
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.31
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.16
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.13
PLN02876	822	acyl-CoA dehydrogenase	97.11
PRK10593	297	hypothetical protein; Provisional	96.97
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.95
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.93
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.92
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.81
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	95.96
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	95.91
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	95.8
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	95.75
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.66
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	95.5
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	95.11
PRK05231	319	homoserine kinase; Provisional	94.92
KOG2268	465	consensus Serine/threonine protein kinase [Signal	94.84
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.8
PRK09550	401	mtnK methylthioribose kinase; Reviewed	94.37
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	94.3
PLN02236	344	choline kinase	93.31
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	92.85
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	91.97
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	90.29
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	90.17
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	89.27
PLN02756	418	S-methyl-5-thioribose kinase	88.18
COG2334	331	Putative homoserine kinase type II (protein kinase	86.87

>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

Probab=100.00  E-value=2.1e-55  Score=443.68  Aligned_cols=233  Identities=45%  Similarity=0.760  Sum_probs=210.1

Q ss_pred             eeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC--CCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEe
Q 035655           25 EEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA--HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIV  102 (670)
Q Consensus        25 ~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~--~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~  102 (670)
                      ++|+|++|.....+   |.++|+|.+.++|.|+||++.  ..++|||+|++||+||++.++     +++||+|+|+|.|.
T Consensus         1 ~~f~f~~f~~~~~~---l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~~~~~~-----~~~sFst~F~F~i~   72 (236)
T cd06899           1 LSFNFNGFSSDQSN---LTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTG-----KVASFSTSFSFSIT   72 (236)
T ss_pred             CceecCCCCCCCCC---EEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEeecCCCC-----CceeEEEEEEEEEE
Confidence            47999999764345   999999999768999999998  899999999999999999988     89999999999999


Q ss_pred             cCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCccccccc
Q 035655          103 TPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLE  182 (670)
Q Consensus       103 ~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~~  182 (670)
                      +.+...+||||||+|+|....++++.|++|||++.++.+.+.+++|||||||++| .+++||++||||||+|++.|..+.
T Consensus        73 ~~~~~~~gdGlAF~i~~~~~~~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n-~~~~D~~~nHigIdvn~~~S~~~~  151 (236)
T cd06899          73 PPNPSLGGDGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQN-PEFGDPDDNHVGIDVNSLVSVKAG  151 (236)
T ss_pred             cCCCCCCCCeEEEEEecCCCCCCCCCcceeeeecCCCCCCcccceEEEEeecccC-cccCCCCCCeEEEEcCCcccceee
Confidence            8766788999999999987766688999999999988777889999999999999 777899999999999999887765


Q ss_pred             ccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEeec
Q 035655          183 PAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAS  262 (670)
Q Consensus       183 ~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsas  262 (670)
                      .+..      ....|.+|+.++|||+||+.+++|+|+|...+.        .+|..|+|+..+||+++|+++||||||||
T Consensus       152 ~~~~------~~~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~--------~~~~~~~ls~~vdL~~~l~~~~~vGFSas  217 (236)
T cd06899         152 YWDD------DGGKLKSGKPMQAWIDYDSSSKRLSVTLAYSGV--------AKPKKPLLSYPVDLSKVLPEEVYVGFSAS  217 (236)
T ss_pred             cccc------ccccccCCCeEEEEEEEcCCCCEEEEEEEeCCC--------CCCcCCEEEEeccHHHhCCCceEEEEEeE
Confidence            5332      234578999999999999999999999998776        58899999999999999999999999999


Q ss_pred             CCceeeeEEEeccccccC
Q 035655          263 TGRKVSSHFILGWSFSMN  280 (670)
Q Consensus       263 tg~~~~~h~i~sW~fs~~  280 (670)
                      ||...|.|+|++|+|+++
T Consensus       218 TG~~~~~h~i~sWsF~s~  235 (236)
T cd06899         218 TGLLTELHYILSWSFSSN  235 (236)
T ss_pred             cCCCcceEEEEEEEEEcC
Confidence            999999999999999975

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-54  Score=460.60  Aligned_cols=270  Identities=45%  Similarity=0.779  Sum_probs=242.0

Q ss_pred             CCCccchhhHHHhhcCccccceEeeeCceeEEEeeccc--------------h-HHHHHHHHHHHhccccCceeeeeeee
Q 035655          348 CPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT--------------R-MREFAAEIESLGRLRHKHLVNLQGWC  412 (670)
Q Consensus       348 ~~~~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~-~~~f~~Ei~~L~~l~H~nIv~l~g~~  412 (670)
                      ..+.|+|.++..||++|...+.||+|+||.||+|.+.+              . .++|.+|+.+|.+++|||+|+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            46789999999999999999999999999999998755              2 57899999999999999999999999


Q ss_pred             eccC-eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEe
Q 035655          413 KRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD  491 (670)
Q Consensus       413 ~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~D  491 (670)
                      .+.+ +.+||||||++|+|.++|+......++|.+|++||.++|+||+|||+.+.++||||||||+|||||+++++||+|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            9998 599999999999999999876543799999999999999999999999888999999999999999999999999


Q ss_pred             ecCceeccC-CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC----CcchhHHHHHHHhhc
Q 035655          492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS----DHFILVDWVLEFQHL  566 (670)
Q Consensus       492 FGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~----~~~~~~~~~~~~~~~  566 (670)
                      ||+|+.... ........ .||.+|+|||++..+..+.|+||||||++|+||+||+++.+.    ....+.+|++.....
T Consensus       221 FGLa~~~~~~~~~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~  299 (361)
T KOG1187|consen  221 FGLAKLGPEGDTSVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE  299 (361)
T ss_pred             ccCcccCCccccceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence            999976544 22111111 899999999999999999999999999999999999999875    344589999999999


Q ss_pred             CCcccccCCCCC-CcccH-HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          567 GQVLDVVDPNLG-SSYVV-AEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       567 ~~~~~~~d~~l~-~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      +++.+++||++. ..++. ++++.+..++++|++.+|.+||+|.||++.|+...
T Consensus       300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            999999999987 66665 78999999999999999999999999999995443

>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported

Probab=100.00  E-value=1.5e-53  Score=431.46  Aligned_cols=233  Identities=43%  Similarity=0.737  Sum_probs=205.1

Q ss_pred             ceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCC-CeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEe
Q 035655           24 KEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH-NVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIV  102 (670)
Q Consensus        24 ~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~-~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~  102 (670)
                      +++|+|+.|.. ..+   +.+.|+|.+..+|+|+||++.. +++|||+|++||+|||..++     +++||+|+|+|.|.
T Consensus         1 ~~~F~~~~F~~-~~~---~~l~G~A~~~~~~~l~LT~~~~~~~~G~~~y~~pi~l~d~~~~-----~~~sF~t~F~f~i~   71 (236)
T PF00139_consen    1 SVSFSFPSFSN-SSN---LTLNGDASISSNGSLQLTPDSTNNQAGRAWYNNPIQLWDSTTG-----NVASFSTSFSFSIT   71 (236)
T ss_dssp             EEEEEESSBTT-GTT---EEEEETEEEETTSEEESSTBETSSEEEEEEESSEEESBETTTT-----EBEEEEEEEEEEEE
T ss_pred             CceEEcCCCCC-CCc---eEEEeeEEeccCCeEEcCCCCCCCcEEEEEECCcEEEeCCCCc-----ceeeeeeEEEEEEe
Confidence            37899999922 356   9999999995589999999987 99999999999999999998     89999999999996


Q ss_pred             cC--CCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCccccc
Q 035655          103 TP--NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIK  180 (670)
Q Consensus       103 ~~--~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~  180 (670)
                      ..  ....+||||||||+|....+.++.|++||+++.++.+.+.+++|||||||++| ++++||++||||||+|++.|..
T Consensus        72 ~~~~~~~~~~dGlAFvi~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~vAVEFDT~~N-~~~~d~~~nHIgI~~n~~~s~~  150 (236)
T PF00139_consen   72 NGPGSSNNGGDGLAFVIQPDPNLPGGSSGGYLGLFNSSTDGNGINNSVAVEFDTYKN-PEYNDPDDNHIGIDVNSVVSNK  150 (236)
T ss_dssp             ESSSSSSS-BEEEEEEEEETTSSTTTSSGGGTTTSSSSSTTGGGGCEEEEEEETSTC-GGGTTTSSSEEEEEESSSSESE
T ss_pred             ccCCCCccCCCceEEEEecCcccccCCCCCccCccccccCCCccCcEEEEEEeeeec-ccccccCCCEEEEECCCCcccc
Confidence            43  45678999999999998777788999999999887777789999999999999 8889999999999999999998


Q ss_pred             ccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEe
Q 035655          181 LEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS  260 (670)
Q Consensus       181 ~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFs  260 (670)
                      +.+++++   .....++.+|+.++|||+||+.+++|+|++....         .+|..|+|+..+||+.+|+++||||||
T Consensus       151 ~~~~~~~---~~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~---------~~~~~~~l~~~vdL~~~l~~~v~vGFs  218 (236)
T PF00139_consen  151 TASAGYY---SSPSFSLSDGKWHTVWIDYDASTKRLSVYLDDNS---------SKPSSPVLSVNVDLSAVLPEQVYVGFS  218 (236)
T ss_dssp             EEE-------EEEEHHHGTTSEEEEEEEEETTTTEEEEEEEETT---------TTSEEEEEEEE--HHHHSCSEEEEEEE
T ss_pred             ccccccc---ccccccccCCcEEEEEEEEcCCccEEEEEEeccc---------CCCcceeEEEEEchHHhcCCCcEEEEE
Confidence            8776654   2356788999999999999999999999999874         478899999999999999999999999


Q ss_pred             ecCCceeeeEEEeccccc
Q 035655          261 ASTGRKVSSHFILGWSFS  278 (670)
Q Consensus       261 astg~~~~~h~i~sW~fs  278 (670)
                      ||||...|.|.|++|+|+
T Consensus       219 asTG~~~~~h~I~sW~F~  236 (236)
T PF00139_consen  219 ASTGGSYQTHDILSWSFS  236 (236)
T ss_dssp             EEESSSSEEEEEEEEEEE
T ss_pred             eecCCCcceEEEEEEEeC
Confidence            999999999999999995

Leguminous plant lectins resemble each other in their physicochemical properties although they differ in their carbohydrate specificities. They consist of two or four subunits with relative molecular mass of 30 kDa and each subunit has one carbohydrate-binding site. The interaction with sugars requires tightly bound calcium and manganese ions. The structural similarities of these lectins are reported by the primary structural analyses and X-ray crystallographic studies. X-ray studies have shown that the folding of the polypeptide chains in the region of the carbohydrate-binding sites is also similar, despite differences in the primary sequences. The carbohydrate-binding sites of these lectins consist of two conserved amino acids on beta pleated sheets. One of these loops contains transition metals, calcium and manganese, which keep the amino acid residues of the sugar-binding site at the required positions. Amino acid sequences of this loop play an important role in the carbohydrate-binding specificities of these lectins. These lectins bind either glucose/mannose or galactose. The exact function of legume lectins is not known but they may be involved in the attachment of nitrogen-fixing bacteria to legumes and in the protection against pathogens. Some legume lectins are proteolytically processed to produce two chains, beta (which corresponds to the N-terminal) and alpha (C-terminal) (IPR000985 from INTERPRO). The lectin concanavalin A (conA) from jack bean is exceptional in that the two chains are transposed and ligated (by formation of a new peptide bond). The N terminus of mature conA thus corresponds to that of the alpha chain and the C terminus to the beta chain.; GO: 0005488 binding; PDB: 1VLN_B 2GDF_C 2JE9_C 2JEC_C 1DGL_B 2P37_B 2CWM_A 2P34_D 2OW4_A 3IPV_B ....

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-44  Score=381.00  Aligned_cols=237  Identities=32%  Similarity=0.502  Sum_probs=198.3

Q ss_pred             ccceEeeeCceeEEEeeccch-----------------HHHHHHHHHHHhccccCceeeeeeeeeccC-eeEEEEeccCC
Q 035655          366 QSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKR-DLLLVYDYIPN  427 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~~-----------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-~~~lV~E~~~~  427 (670)
                      ..+.||+|+||+||+|.+...                 .++|.+|+.+|.+++|||||+++|+|.+.. .+++|+|||++
T Consensus        45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~  124 (362)
T KOG0192|consen   45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG  124 (362)
T ss_pred             hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence            345699999999999987551                 348999999999999999999999999887 79999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce-EEecccCCCcEEecCCC-cEEEEeecCceeccCCCcce
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV-VIHRDVKSGNVLIDADM-NARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~~~~~~  505 (670)
                      |+|.++|++..+..+++..+++++.|||+||.|||+   .+ ||||||||+|||++.++ .+||+|||+++...... ..
T Consensus       125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~  200 (362)
T KOG0192|consen  125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-TS  200 (362)
T ss_pred             CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-cc
Confidence            999999988555689999999999999999999999   66 99999999999999997 99999999998766533 23


Q ss_pred             eeccccCcCCCCccccc--cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          506 TTNVVGTIGYIAPELAR--TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~--~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      .+...||+.|||||++.  ..+|+.|+||||||+++|||+||+.||.......+...  ....+.         +...+.
T Consensus       201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~--v~~~~~---------Rp~~p~  269 (362)
T KOG0192|consen  201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASA--VVVGGL---------RPPIPK  269 (362)
T ss_pred             ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHH--HHhcCC---------CCCCCc
Confidence            34478999999999999  56999999999999999999999999987544222221  111111         112222


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .....+..++..||+.||..||++.+++..|+..
T Consensus       270 ~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~  303 (362)
T KOG0192|consen  270 ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI  303 (362)
T ss_pred             cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence            2446678888899999999999999999999854

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-45  Score=386.43  Aligned_cols=239  Identities=32%  Similarity=0.521  Sum_probs=207.2

Q ss_pred             CccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      .+..++.||+|.||.||.|.+..              ..++|.+|+++|++|+|+|||+++|+|..++.++||+|||++|
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence            34557899999999999998755              2478999999999999999999999999999999999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeec
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      +|.+||+...+..+...+.+.++.|||+||+||++   +++|||||.++|||++++..+||+|||||+...++.......
T Consensus       287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~  363 (468)
T KOG0197|consen  287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG  363 (468)
T ss_pred             cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence            99999998667789999999999999999999999   999999999999999999999999999999666655555555


Q ss_pred             cccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ..-+..|.|||.+..+.++.|||||||||+||||+| |+.|+....  .          .++.+.++...+-..+..++.
T Consensus       364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms--n----------~ev~~~le~GyRlp~P~~CP~  431 (468)
T KOG0197|consen  364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS--N----------EEVLELLERGYRLPRPEGCPD  431 (468)
T ss_pred             CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC--H----------HHHHHHHhccCcCCCCCCCCH
Confidence            566789999999999999999999999999999999 999987522  1          122333334444455556778


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+.+++..||+.+|++|||++.+...|+.
T Consensus       432 ~vY~lM~~CW~~~P~~RPtF~~L~~~l~~  460 (468)
T KOG0197|consen  432 EVYELMKSCWHEDPEDRPTFETLREVLED  460 (468)
T ss_pred             HHHHHHHHHhhCCcccCCCHHHHHHHHHH
Confidence            89999999999999999999999888864

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-44  Score=363.49  Aligned_cols=237  Identities=26%  Similarity=0.400  Sum_probs=198.7

Q ss_pred             cccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccC-eeEEEEeccC
Q 035655          365 KQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR-DLLLVYDYIP  426 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-~~~lV~E~~~  426 (670)
                      +..+.||+|..|+|||+.++.                 ..+++.+|++++++.+||+||.++|.|...+ +..++||||.
T Consensus        82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence            346889999999999998764                 3578899999999999999999999999998 5999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +|||++++...  ..+++...-+|+.+|++||.|||++  .+||||||||+|||++..|++||||||.++.....   ..
T Consensus       162 gGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~a  234 (364)
T KOG0581|consen  162 GGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---IA  234 (364)
T ss_pred             CCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---hc
Confidence            99999999655  4599999999999999999999963  89999999999999999999999999999877664   45


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      .+.+||..|||||.+.+..|+.++||||||+.++|+.+|+-|+........+|..-+.   .+..-..|++...   ...
T Consensus       235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~---~Iv~~ppP~lP~~---~fS  308 (364)
T KOG0581|consen  235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC---AIVDEPPPRLPEG---EFS  308 (364)
T ss_pred             ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH---HHhcCCCCCCCcc---cCC
Confidence            6789999999999999999999999999999999999999999764222222221111   1111123333332   245


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .++..++..||++||.+||+++|+++|-
T Consensus       309 ~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp  336 (364)
T KOG0581|consen  309 PEFRSFVSCCLRKDPSERPSAKQLLQHP  336 (364)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence            6788899999999999999999999864

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.7e-41  Score=363.39  Aligned_cols=234  Identities=26%  Similarity=0.423  Sum_probs=197.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ..|...+.||+|||+.||.+++..                   ..+...+||++.++|+|||||+++++|++.++.|+|.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            568889999999999999998722                   3567889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      |+|++++|..+++  .++.+++.+++.+++||+.||.|||+   .+|+|||||..|++|++++++||+|||||.....+.
T Consensus        98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~  172 (592)
T KOG0575|consen   98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG  172 (592)
T ss_pred             EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence            9999999999996  44679999999999999999999999   999999999999999999999999999999887543


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       ....+.+||+.|+|||++.....+..+||||+|||+|-|++|++||+.....      +....-+.-+-.       ++
T Consensus       173 -Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk------ety~~Ik~~~Y~-------~P  238 (592)
T KOG0575|consen  173 -ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK------ETYNKIKLNEYS-------MP  238 (592)
T ss_pred             -cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH------HHHHHHHhcCcc-------cc
Confidence             3345679999999999999889999999999999999999999999864321      111110111111       11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ........+|+..+|++||.+|||+++|+.+=
T Consensus       239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~  270 (592)
T KOG0575|consen  239 SHLSAEAKDLIRKLLRPNPSERPSLDEVLDHP  270 (592)
T ss_pred             cccCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence            12234567888899999999999999999863

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=7.7e-42  Score=379.02  Aligned_cols=242  Identities=29%  Similarity=0.462  Sum_probs=204.2

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      ...+....+.||+|.||+||+|....                      ..++|.+|+++|..|+|||||+|+|+|.+++.
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P  563 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP  563 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence            34556778899999999999997532                      35789999999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCC------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          418 LLLVYDYIPNGSLDSLLFDNE------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                      +|+|+|||..|+|.+||..+.            ..+|+..+.+.||.|||.||.||-+   +.+|||||.++|+|+.++.
T Consensus       564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l  640 (774)
T KOG1026|consen  564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENL  640 (774)
T ss_pred             eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---Ccccccchhhhhceeccce
Confidence            999999999999999996421            2238999999999999999999999   9999999999999999999


Q ss_pred             cEEEEeecCceeccCCCccee-eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCC-cchhHHHHHH
Q 035655          486 NARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSD-HFILVDWVLE  562 (670)
Q Consensus       486 ~~kL~DFGla~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~-~~~~~~~~~~  562 (670)
                      .|||+||||++.....+..+. ....-..+|||||.+..+++|++||||||||+|||+++ |+.|+.+- +..    +.+
T Consensus       641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E----VIe  716 (774)
T KOG1026|consen  641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE----VIE  716 (774)
T ss_pred             EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH----HHH
Confidence            999999999986554443332 24455789999999999999999999999999999999 99999762 222    233


Q ss_pred             HhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       563 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ....++++         +.+..++.++..|++.||+.+|.+||+++||-..|+..
T Consensus       717 ~i~~g~lL---------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~  762 (774)
T KOG1026|consen  717 CIRAGQLL---------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW  762 (774)
T ss_pred             HHHcCCcc---------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence            33444432         34455668899999999999999999999999999754

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.2e-42  Score=337.61  Aligned_cols=242  Identities=23%  Similarity=0.391  Sum_probs=195.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeee-eeccCe-eEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGW-CKRKRD-LLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~-~~~~~~-~~lV  421 (670)
                      .+|++.++||+|.||+|||+....                  ..++...|+.+|++|+|||||+++++ +.++++ ++||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            357888999999999999987532                  34567899999999999999999995 445555 8999


Q ss_pred             EeccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccccc-eEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          422 YDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ-VVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ||||..|+|.+.++.  ..++.+++..+++++.|++.||..+|..+.. .|+||||||.||+|+.+|.+||+||||++.+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            999999999999864  4456799999999999999999999996643 4899999999999999999999999999988


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .... .-....+|||.||+||.+...+|+.||||||+||++|||+.-+.||.++..  .... .....++.     |++.
T Consensus       179 ~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~--~~L~-~KI~qgd~-----~~~p  249 (375)
T KOG0591|consen  179 SSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL--LSLC-KKIEQGDY-----PPLP  249 (375)
T ss_pred             cchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH--HHHH-HHHHcCCC-----CCCc
Confidence            7644 334567999999999999999999999999999999999999999987632  2211 11222211     1121


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                         +.-....+..++..|+..||+.||+...+++.+.
T Consensus       250 ---~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  250 ---DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             ---HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence               1344567788899999999999998554444443

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-41  Score=344.77  Aligned_cols=236  Identities=23%  Similarity=0.414  Sum_probs=189.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ..+|...+.||+|.|+.||+|++++.                  .+....|+.+|+.++|||||++++++..++.++|||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            35688888899999999999987651                  234568999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC------CcEEEEeecCce
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD------MNARLGDFGLAR  496 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~------~~~kL~DFGla~  496 (670)
                      |||.+|+|.+||+.++  .+++...+.++.|||.||++||+   ++||||||||.||||+..      -.+||+|||+|+
T Consensus        89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR  163 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR  163 (429)
T ss_pred             EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence            9999999999997764  59999999999999999999999   999999999999999765      458999999999


Q ss_pred             eccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ....+.  ...+.+|++-|||||++..++|+.|+|+||+|+++||+++|+.||+....  .+..........+..     
T Consensus       164 ~L~~~~--~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~--~eL~~~~~k~~~~~~-----  234 (429)
T KOG0595|consen  164 FLQPGS--MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP--KELLLYIKKGNEIVP-----  234 (429)
T ss_pred             hCCchh--HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH--HHHHHHHhccccccC-----
Confidence            887543  34567999999999999999999999999999999999999999986322  222222222222111     


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                         ..+......+.++...-++.+|.+|-+..+-..+
T Consensus       235 ---~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~  268 (429)
T KOG0595|consen  235 ---VLPAELSNPLRELLISLLQRNPKDRISFEDFFDH  268 (429)
T ss_pred             ---chhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence               1112222334456666677788888776665544

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-42  Score=374.07  Aligned_cols=252  Identities=28%  Similarity=0.517  Sum_probs=216.1

Q ss_pred             CccchhhHHHhhcC---------ccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhcc
Q 035655          350 HRFRYSDLYTATKG---------FKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRL  400 (670)
Q Consensus       350 ~~~~~~~l~~~t~~---------f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l  400 (670)
                      ..++|+|-..|-+.         ..+.++||.|.||.||+|+++.                    ..++|+.|+.+|.++
T Consensus       608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF  687 (996)
T KOG0196|consen  608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF  687 (996)
T ss_pred             CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence            35677766555444         3567899999999999998753                    467899999999999


Q ss_pred             ccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEE
Q 035655          401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVL  480 (670)
Q Consensus       401 ~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NIL  480 (670)
                      .||||++|.|+.......+||.|||+||+|+.||+.+.+ .+++.+..-++++||.||.||.+   .++|||||.++|||
T Consensus       688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNIL  763 (996)
T KOG0196|consen  688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNIL  763 (996)
T ss_pred             CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhhee
Confidence            999999999999999999999999999999999998875 59999999999999999999998   99999999999999


Q ss_pred             ecCCCcEEEEeecCceeccCCCcceeeccc--cCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhH
Q 035655          481 IDADMNARLGDFGLARLFDHGKISHTTNVV--GTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILV  557 (670)
Q Consensus       481 ld~~~~~kL~DFGla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~  557 (670)
                      ++.+..+|++||||++..+++.....+...  -+.+|.|||.+...++|.+|||||||||+||+++ |.+||=+      
T Consensus       764 VNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd------  837 (996)
T KOG0196|consen  764 VNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD------  837 (996)
T ss_pred             eccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc------
Confidence            999999999999999988766533333332  3468999999999999999999999999999988 9999743      


Q ss_pred             HHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          558 DWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       558 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                            +.+.+++..+...++-..+.+++..|.+|++.|||+|-.+||++.||+..|.+.
T Consensus       838 ------mSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl  891 (996)
T KOG0196|consen  838 ------MSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL  891 (996)
T ss_pred             ------cchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence                  122334445555555566777889999999999999999999999999999764

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.7e-41  Score=345.64  Aligned_cols=241  Identities=25%  Similarity=0.347  Sum_probs=196.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccch-----------------------HHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR-----------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~-----------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      .+.|...+.||+|+||.|-+|..+.+                       .....+|+++|++|+|||||++++++...+.
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            34577789999999999999876441                       1234589999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC---CcEEEEeecC
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---MNARLGDFGL  494 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~---~~~kL~DFGl  494 (670)
                      .|+|+||++||+|.+.+-.+.  .+.+..-.-+++|++.|+.|||+   +||+||||||+|||+..+   ..+||+|||+
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             eEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccch
Confidence            999999999999999997664  47777788999999999999999   999999999999999766   7899999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCC---CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKA---SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD  571 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~  571 (670)
                      |+....  ...+.+.+||+.|.|||++.+...   ..|.|+||+||+||-++||..||........  ..+....+++. 
T Consensus       326 AK~~g~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s--l~eQI~~G~y~-  400 (475)
T KOG0615|consen  326 AKVSGE--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS--LKEQILKGRYA-  400 (475)
T ss_pred             hhcccc--ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc--HHHHHhcCccc-
Confidence            998764  345677899999999999987643   3478999999999999999999986322110  11111122211 


Q ss_pred             ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          572 VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       572 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                           .....+.+..++.++++.++|..||++||++.|+++|-|-
T Consensus       401 -----f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~  440 (475)
T KOG0615|consen  401 -----FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWF  440 (475)
T ss_pred             -----ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhh
Confidence                 1123455677889999999999999999999999998663

>cd01951 lectin_L-type legume lectins

Probab=100.00  E-value=6.8e-39  Score=322.33  Aligned_cols=203  Identities=29%  Similarity=0.418  Sum_probs=170.3

Q ss_pred             eEEccceeeCC-CCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCC
Q 035655           42 ITRERASILKP-SGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQ  120 (670)
Q Consensus        42 ~~~~g~a~~~~-~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~  120 (670)
                      +.+.|+|.+.+ ++.|+||++..+++||++|++||++|            ++|+|+|+|.|.+.. ..+||||||+|+|.
T Consensus        16 ~~~~G~A~~~~~~~~l~Lt~~~~~~~G~~~~~~~i~~~------------~~F~~~F~f~i~~~~-~~~gdG~aF~l~~~   82 (223)
T cd01951          16 WQLNGSATLTTDSGVLRLTPDTGNQAGSAWYKTPIDLS------------KDFTTTFKFYLGTKG-TNGADGIAFVLQND   82 (223)
T ss_pred             cEEcccEEecCCCCEEEECCCCCCcEEEEEECCcEecc------------CCEEEEEEEEEeCCC-CCCCCcEEEEEecC
Confidence            99999999975 78999999989999999999999996            579999999999764 57899999999998


Q ss_pred             CCCCCCCCC--cccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCccccc--ccccccccCCCccccc
Q 035655          121 PSFPGGKAE--HYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIK--LEPAAYYENGTKEDFT  196 (670)
Q Consensus       121 ~~~~~~~~g--~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~--~~~~~~~~~~~~~~~~  196 (670)
                      +..+.+..|  ++||+       .+.++.+||||||++| .+++||+.||||||+|+..+..  ..+.++..    .+..
T Consensus        83 ~~~~~~~~g~~~~lG~-------~~~~~~~aVefDT~~N-~~~~dp~~~higi~~n~~~~~~~~~~~~~~~~----~~~~  150 (223)
T cd01951          83 PAGALGGGGGGGGLGY-------GGIGNSVAVEFDTYKN-DDNNDPNGNHISIDVNGNGNNTALATSLGSAS----LPNG  150 (223)
T ss_pred             CCCccccCCCCCccCc-------cccCCeEEEEEecccc-CCCCCCCCCEEEEEcCCCCCCcccccccceee----CCCc
Confidence            765555555  88887       4567899999999999 7778999999999999987541  12222211    1222


Q ss_pred             cCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEeecCCceeeeEEEeccc
Q 035655          197 LESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWS  276 (670)
Q Consensus       197 l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsastg~~~~~h~i~sW~  276 (670)
                      ..+|+.++|||+||+.+++|+|++....          .|..|.++.++||+..++++||||||||||...+.|+|++|+
T Consensus       151 ~~~g~~~~v~I~Y~~~~~~L~v~l~~~~----------~~~~~~l~~~~~l~~~~~~~~yvGFTAsTG~~~~~h~V~~ws  220 (223)
T cd01951         151 TGLGNEHTVRITYDPTTNTLTVYLDNGS----------TLTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNWS  220 (223)
T ss_pred             cCCCCEEEEEEEEeCCCCEEEEEECCCC----------ccccccEEEeeeecccCCCcEEEEEEcccCCCcceeEEEEEE
Confidence            2239999999999999999999997543          256789999999999999999999999999999999999999


Q ss_pred             ccc
Q 035655          277 FSM  279 (670)
Q Consensus       277 fs~  279 (670)
                      |+.
T Consensus       221 f~~  223 (223)
T cd01951         221 FTS  223 (223)
T ss_pred             ecC
Confidence            973

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7e-40  Score=338.71  Aligned_cols=243  Identities=27%  Similarity=0.442  Sum_probs=194.9

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------h----HHHHHHHHHHHhccccCceeeeeeeeeccC--eeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------R----MREFAAEIESLGRLRHKHLVNLQGWCKRKR--DLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------~----~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~--~~~lV~E  423 (670)
                      .++...+.||+|.||.||++...+            .    .+.+.+|+.+|++|+|||||+++|......  .+++.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            456678899999999999998754            1    344789999999999999999999754444  6999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-CCcEEEEeecCceeccC--
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFDH--  500 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-~~~~kL~DFGla~~~~~--  500 (670)
                      |+++|+|.+++.+... .+++..+..+.+||++||+|||+   ++++||||||+|||++. ++.+||+|||+++....  
T Consensus        97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~  172 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG  172 (313)
T ss_pred             ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence            9999999999988776 79999999999999999999998   99999999999999999 79999999999987663  


Q ss_pred             CCcceeeccccCcCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ..........||+.|||||++..+. ...++|||||||+++||+||+.||... ....++........     .-|    
T Consensus       173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~~-----~~P----  242 (313)
T KOG0198|consen  173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGRED-----SLP----  242 (313)
T ss_pred             ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhccC-----CCC----
Confidence            2222344578999999999998643 345999999999999999999999752 11122221111111     112    


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      ..+........+++..|++.+|++|||+.++++|..-..
T Consensus       243 ~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  243 EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence            223334466778889999999999999999999865443

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-39  Score=326.18  Aligned_cols=228  Identities=26%  Similarity=0.333  Sum_probs=188.3

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ..++|+..++||+|+||+||..+..+                   ..+...+|..+|.+++||.||+++-.|++.+.+|+
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            35689999999999999999987654                   23456689999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |+||+.||.|..+|.+..  .+++..+.-++..|+.||.|||+   ++||||||||+|||||++|.++|+||||++....
T Consensus       103 Vld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~  177 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK  177 (357)
T ss_pred             EEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence            999999999999997654  58999999999999999999999   9999999999999999999999999999985544


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .. ..+.+.+||+.|||||++.+..|+..+|.||+|+++|||++|.+||...+..  .+... ...+++         ..
T Consensus       178 ~~-~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~--~~~~~-I~~~k~---------~~  244 (357)
T KOG0598|consen  178 DG-DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK--KMYDK-ILKGKL---------PL  244 (357)
T ss_pred             CC-CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH--HHHHH-HhcCcC---------CC
Confidence            32 3445589999999999999999999999999999999999999999875422  11111 111110         01


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARP  605 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RP  605 (670)
                      .+.-......+++...++.||++|-
T Consensus       245 ~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  245 PPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             CCccCCHHHHHHHHHHhccCHHHhc
Confidence            1111224556777788999999995

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.6e-38  Score=339.79  Aligned_cols=242  Identities=23%  Similarity=0.377  Sum_probs=191.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc-C
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK-R  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~-~  416 (670)
                      .++|+..++||+|+||.||+|....                      ..+.+.+|+.+++++ +||||++++++|... +
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            4678899999999999999986310                      134678999999999 899999999998764 4


Q ss_pred             eeEEEEeccCCCCchhhcccCC----------------------------------------------------------
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNE----------------------------------------------------------  438 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------  438 (670)
                      ..++||||+++|+|.+++....                                                          
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            6899999999999999986432                                                          


Q ss_pred             --ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc-ceeeccccCcCC
Q 035655          439 --NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGY  515 (670)
Q Consensus       439 --~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y  515 (670)
                        ...+++.++.+++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+++....... .......++..|
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y  242 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW  242 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence              1348889999999999999999998   8999999999999999999999999999986543221 112234567889


Q ss_pred             CCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHH
Q 035655          516 IAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL  594 (670)
Q Consensus       516 ~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~  594 (670)
                      +|||++.+..++.++|||||||++|||++ |+.||....... ... .....+..     +..    +......+.+++.
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~-~~~~~~~~-----~~~----~~~~~~~l~~li~  311 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFC-QRLKDGTR-----MRA----PENATPEIYRIML  311 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHH-HHHhcCCC-----CCC----CCCCCHHHHHHHH
Confidence            99999999999999999999999999997 999997632211 111 11111111     111    1122356788999


Q ss_pred             hhccCCCCCCCCHHHHHHHhcC
Q 035655          595 LCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       595 ~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +||+.||.+||++.|+++.|+.
T Consensus       312 ~cl~~dp~~RPs~~el~~~l~~  333 (338)
T cd05102         312 ACWQGDPKERPTFSALVEILGD  333 (338)
T ss_pred             HHccCChhhCcCHHHHHHHHHH
Confidence            9999999999999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-39  Score=344.14  Aligned_cols=258  Identities=26%  Similarity=0.422  Sum_probs=204.5

Q ss_pred             hhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       355 ~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      .+-....+.+.....||+|.||+||+|.+-+               ..+.|++|+.++++-||.||+-+.|||..... .
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-A  463 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-A  463 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-e
Confidence            3334445566778999999999999998743               56899999999999999999999999998877 9


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      ||..+|+|-+|+.+|+..+ ..+...+.++|++|||+|+.|||.   ++|||||||..||+|.++++|||+||||+....
T Consensus       464 IiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~  539 (678)
T KOG0193|consen  464 IITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT  539 (678)
T ss_pred             eeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeee
Confidence            9999999999999998765 468999999999999999999999   999999999999999999999999999997544


Q ss_pred             CCC-cceeeccccCcCCCCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          500 HGK-ISHTTNVVGTIGYIAPELARTG---KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       500 ~~~-~~~~~~~~gt~~y~aPE~~~~~---~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      .-. ........|...|||||+++.+   +|+..+||||||||+|||+||..||.......+-|.     .++-.-..|.
T Consensus       540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifm-----VGrG~l~pd~  614 (678)
T KOG0193|consen  540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFM-----VGRGYLMPDL  614 (678)
T ss_pred             eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEE-----ecccccCccc
Confidence            321 1122334678899999998754   689999999999999999999999984332222221     1111111111


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCC-CCCCCC
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDEL-LPIIDN  625 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~-~p~~~~  625 (670)
                      .   .......+.+.+|+..||..++++||.+.+|+..|+...+ +|.+.+
T Consensus       615 s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~R  662 (678)
T KOG0193|consen  615 S---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINR  662 (678)
T ss_pred             h---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccccccc
Confidence            1   1122345677888899999999999999999998876654 555443

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=3.2e-37  Score=374.11  Aligned_cols=247  Identities=29%  Similarity=0.501  Sum_probs=204.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccch------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      ...+...+.||+|+||.||+|.....            .....+|++.+++++||||++++|+|.+.+..++||||+++|
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g  768 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGK  768 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCC
Confidence            34577889999999999999986421            112346799999999999999999999999999999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeec
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      +|.++++     .++|.++.+++.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||........     ..
T Consensus       769 ~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-----~~  837 (968)
T PLN00113        769 NLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-----TK  837 (968)
T ss_pred             cHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-----CC
Confidence            9999994     38999999999999999999997666899999999999999999988876 6665433221     22


Q ss_pred             cccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC---cchhHHHHHHHhhcCCcccccCCCCCC--cccH
Q 035655          509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD---HFILVDWVLEFQHLGQVLDVVDPNLGS--SYVV  583 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~---~~~~~~~~~~~~~~~~~~~~~d~~l~~--~~~~  583 (670)
                      ..+|..|||||++.+..++.|+|||||||++|||++|+.||+..   .....+|+............+|+.+..  ..+.
T Consensus       838 ~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  917 (968)
T PLN00113        838 CFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQ  917 (968)
T ss_pred             ccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccH
Confidence            36889999999999999999999999999999999999999642   334666766554444455566666643  3455


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      +++.++.+++.+||+.+|++||+|+||++.|+...
T Consensus       918 ~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~  952 (968)
T PLN00113        918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESAS  952 (968)
T ss_pred             HHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence            67778999999999999999999999999998653

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-39  Score=366.84  Aligned_cols=240  Identities=27%  Similarity=0.432  Sum_probs=198.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++....+.||+|.||.||.|...+                      ...+|.+|..+|++++|||||+++|+|.+....
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            3445667899999999999997633                      356899999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCC-----ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          419 LLVYDYIPNGSLDSLLFDNE-----NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      +|++|||++|+|..||++.+     ...|+..+.+.++.|||+|+.||++   +++|||||.++|+||++...|||+|||
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFG  847 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFG  847 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccc
Confidence            99999999999999998752     3468999999999999999999999   999999999999999999999999999


Q ss_pred             CceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcc-hhHHHHHHHhhcCCcc
Q 035655          494 LARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHF-ILVDWVLEFQHLGQVL  570 (670)
Q Consensus       494 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~-~~~~~~~~~~~~~~~~  570 (670)
                      ||+.+...... ......-...|||||.+..+.++.|+|||||||++||++| |..||..... .....   ....+   
T Consensus       848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~---~~~gg---  921 (1025)
T KOG1095|consen  848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD---VLEGG---  921 (1025)
T ss_pred             hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH---HHhCC---
Confidence            99954443322 2222244578999999999999999999999999999999 9999976321 11111   11122   


Q ss_pred             cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       571 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                           +  -+.+..+++.+.+++..||+.+|++||++..+++.+..
T Consensus       922 -----R--L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~  960 (1025)
T KOG1095|consen  922 -----R--LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPA  960 (1025)
T ss_pred             -----c--cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhh
Confidence                 1  12344566788999999999999999999999998765

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-37  Score=321.29  Aligned_cols=248  Identities=24%  Similarity=0.351  Sum_probs=199.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .+.|+..+.||.|..+.||+|+...                 ..+.+.+|+..|+.++||||++++..|..++.+++||.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            4578889999999999999997532                 35778899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      ||.+||+.++++..-...+.+..+..|++++++||.|||+   +|.||||||+.||||+++|.|||+|||.+..+.....
T Consensus       105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~  181 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD  181 (516)
T ss_pred             hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence            9999999999988776779999999999999999999999   9999999999999999999999999998765543322


Q ss_pred             ce--e-eccccCcCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          504 SH--T-TNVVGTIGYIAPELART--GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       504 ~~--~-~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ..  . .+.+||++|||||++..  ..|+.|+|||||||..+||.+|..||.......+   .-....+......-..+.
T Consensus       182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv---Ll~tLqn~pp~~~t~~~~  258 (516)
T KOG0582|consen  182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV---LLLTLQNDPPTLLTSGLD  258 (516)
T ss_pred             eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH---HHHHhcCCCCCcccccCC
Confidence            21  1 45699999999999543  3689999999999999999999999986432211   111111111111111222


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .+........+.+++..|+++||.+|||+++++++-
T Consensus       259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~  294 (516)
T KOG0582|consen  259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA  294 (516)
T ss_pred             hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence            223333446788999999999999999999999853

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-38  Score=333.00  Aligned_cols=234  Identities=28%  Similarity=0.474  Sum_probs=196.2

Q ss_pred             ccceEeeeCceeEEEeeccchH------HHHH-HHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCC
Q 035655          366 QSEVIGTGGFGEVYKGVLPTRM------REFA-AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE  438 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~~~------~~f~-~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~  438 (670)
                      +.+-||.|+.|.||+|++....      ++.+ .+|+-|++|+||||+.+.|+|.....+|||||||..|-|...|+.. 
T Consensus       128 ELeWlGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~-  206 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG-  206 (904)
T ss_pred             hhhhhccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhcc-
Confidence            4678999999999999987642      2222 5899999999999999999999999999999999999999999654 


Q ss_pred             ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCc
Q 035655          439 NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP  518 (670)
Q Consensus       439 ~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aP  518 (670)
                       ..++.....++.++||.||.|||.   +.|||||||.-||||..+..+||+|||-++.....  .....++||..||||
T Consensus       207 -~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaGTVaWMAP  280 (904)
T KOG4721|consen  207 -RPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAGTVAWMAP  280 (904)
T ss_pred             -CccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhhhHhhhCH
Confidence             468889999999999999999999   99999999999999999999999999999866543  344567999999999


Q ss_pred             cccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhcc
Q 035655          519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSH  598 (670)
Q Consensus       519 E~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  598 (670)
                      |++++.+.++|.||||||||||||+||.-||.+-+..-+-|-  ..  ..       .|.-..+..+++-+.-|+.+||+
T Consensus       281 EvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG--VG--sN-------sL~LpvPstcP~GfklL~Kqcw~  349 (904)
T KOG4721|consen  281 EVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG--VG--SN-------SLHLPVPSTCPDGFKLLLKQCWN  349 (904)
T ss_pred             HHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEe--cc--CC-------cccccCcccCchHHHHHHHHHHh
Confidence            999999999999999999999999999999976332222221  11  11       12223344455667788999999


Q ss_pred             CCCCCCCCHHHHHHHhcCC
Q 035655          599 QKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       599 ~dP~~RPs~~evl~~L~~~  617 (670)
                      ..|..||++++++.||+-.
T Consensus       350 sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  350 SKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             cCCCCCccHHHHHHHHhhc
Confidence            9999999999999999744

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=3.2e-37  Score=321.87  Aligned_cols=236  Identities=24%  Similarity=0.323  Sum_probs=191.0

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .|+..+.||+|+||.||++....                   ....+.+|+.++++++|+||+++.+++.+.+..++|+|
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            36778999999999999987632                   12346789999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++|+|.+++.......+++.++..++.|++.||+|||+   .+|+||||||+|||+++++.+||+|||++....... 
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-  156 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-  156 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence            9999999988866555568999999999999999999998   899999999999999999999999999998754322 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHHhhcCCcccccCCCCCCccc
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       ......||..|+|||++.+..++.++|||||||++|||++|+.||....... ..........        .  ...++
T Consensus       157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--------~--~~~~~  225 (285)
T cd05631         157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--------D--QEEYS  225 (285)
T ss_pred             -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--------c--cccCC
Confidence             2234578999999999999999999999999999999999999997633211 1111110000        0  01122


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPT-----MRQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  613 (670)
                      ......+.+++..||+.||.+||+     +++++++
T Consensus       226 ~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         226 EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            223456788999999999999997     8888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=7e-38  Score=323.33  Aligned_cols=240  Identities=28%  Similarity=0.438  Sum_probs=192.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+|.+..                    ..+.|.+|+.++++++||||+++++++..++..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            3568889999999999999986421                    22468899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.+|++|||.+.....
T Consensus        84 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~  159 (266)
T cd05064          84 VTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS  159 (266)
T ss_pred             EEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence            999999999999997643 368999999999999999999998   8999999999999999999999999998765432


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ..........++..|+|||.+.+..++.++|||||||+++|+++ |+.||......  +..... ..+.     .+.   
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~-~~~~-----~~~---  228 (266)
T cd05064         160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAV-EDGF-----RLP---  228 (266)
T ss_pred             cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHH-HCCC-----CCC---
Confidence            22121222345678999999999999999999999999999775 99999753221  111111 1111     011   


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       .+......+.+++..||+++|.+||+++++.+.|..
T Consensus       229 -~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         229 -APRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             -CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence             112234567889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=4e-38  Score=310.70  Aligned_cols=246  Identities=25%  Similarity=0.321  Sum_probs=191.0

Q ss_pred             cCccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      +.|+...++|+|+||.||||+.+++                  .+-..+||++|++|+|+|+|.|+.+|..+..++||+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            3577788999999999999988662                  2334599999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      ||+..-|.+ |.... ..++.+.+.+++.|++.|+.|+|+   +++|||||||+|||++.++.+||||||+|+.... ..
T Consensus        82 ~~dhTvL~e-Le~~p-~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pg  155 (396)
T KOG0593|consen   82 YCDHTVLHE-LERYP-NGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PG  155 (396)
T ss_pred             ecchHHHHH-HHhcc-CCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcC-Cc
Confidence            998754444 43333 358899999999999999999999   9999999999999999999999999999998764 23


Q ss_pred             ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHH-------------HhhcCCc
Q 035655          504 SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE-------------FQHLGQV  569 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~-------------~~~~~~~  569 (670)
                      ...+..+.|..|.|||.+.+ .+|....||||+||++.||++|...|.+....-.-+...             +......
T Consensus       156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F  235 (396)
T KOG0593|consen  156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFF  235 (396)
T ss_pred             chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCce
Confidence            44566788999999999887 689999999999999999999999997633211111100             1111111


Q ss_pred             c--cccCCCCCCc---ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 L--DVVDPNLGSS---YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ~--~~~d~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .  .+..+.-...   -.+....-+++++..|++.||.+|++-+|++.|
T Consensus       236 ~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  236 HGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             eeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            1  1111111111   112234578999999999999999999999875

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.8e-38  Score=327.15  Aligned_cols=246  Identities=27%  Similarity=0.368  Sum_probs=193.8

Q ss_pred             cCccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeecc--CeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~lV  421 (670)
                      +.|+..++||+|.||.|||++...+                  ..-..+||.+|++|.||||++|.+...+.  ..+|+|
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            3466778999999999999987442                  12345999999999999999999998766  689999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +|||+. +|.-++... .-.++..++..+++|++.||.|||+   ++|+|||||.+|||||.+|.+||+|||||+++...
T Consensus       197 FeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS  271 (560)
T ss_pred             Eecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence            999976 787777543 3479999999999999999999999   99999999999999999999999999999998887


Q ss_pred             CcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhcCCcccccCC--CC
Q 035655          502 KISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHLGQVLDVVDP--NL  577 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~~~~~~~~d~--~l  577 (670)
                      .....+..+-|+.|.|||++.+. .|+...|+||.||||.||+.|+..|.+... .....+  +...+...+..-+  .|
T Consensus       272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI--fklcGSP~e~~W~~~kL  349 (560)
T KOG0600|consen  272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI--FKLCGSPTEDYWPVSKL  349 (560)
T ss_pred             CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH--HHHhCCCChhccccccC
Confidence            76667788899999999988875 799999999999999999999999987322 111111  1111111111111  00


Q ss_pred             --------CCcccHH-------HHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          578 --------GSSYVVA-------EMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       578 --------~~~~~~~-------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                              ...+...       .....++|+..+|..||.+|.|+.++++.=
T Consensus       350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~se  401 (560)
T KOG0600|consen  350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSE  401 (560)
T ss_pred             CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCc
Confidence                    1111111       134567888889999999999999999753

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-38  Score=330.76  Aligned_cols=248  Identities=25%  Similarity=0.335  Sum_probs=196.2

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch---------HHHH--------HHHHHHHhccc-cCceeeeeeeeeccC-eeEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR---------MREF--------AAEIESLGRLR-HKHLVNLQGWCKRKR-DLLL  420 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~---------~~~f--------~~Ei~~L~~l~-H~nIv~l~g~~~~~~-~~~l  420 (670)
                      ..++|...++||.|.||.||+|+....         ++.|        .+|++.|++|+ |||||+|.+++.+.+ .+++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            356788899999999999999986541         1222        38999999999 999999999999887 9999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |||||+ .+|++.++++ +..+++..+..|+.||++||+|+|.   +|+.|||+||+|||+..+..+||+|||+||....
T Consensus        88 VfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S  162 (538)
T KOG0661|consen   88 VFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVRS  162 (538)
T ss_pred             eHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEeccccccccccc
Confidence            999994 6999999887 6789999999999999999999998   9999999999999999999999999999997654


Q ss_pred             CCcceeeccccCcCCCCcccc-ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhc------------
Q 035655          501 GKISHTTNVVGTIGYIAPELA-RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHL------------  566 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~-~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~------------  566 (670)
                      .  ...+..+.|..|.|||++ +.+.|+.+.|+||+|||++|+.+-+..|.+... ..+-.+.+....            
T Consensus       163 k--pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L  240 (538)
T KOG0661|consen  163 K--PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL  240 (538)
T ss_pred             C--CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence            3  345667899999999975 567899999999999999999999999976322 111111111100            


Q ss_pred             CCcccccCCCCC----CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          567 GQVLDVVDPNLG----SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       567 ~~~~~~~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...+...-|...    .........++++++..|++-||.+|||++|++++-
T Consensus       241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p  292 (538)
T KOG0661|consen  241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP  292 (538)
T ss_pred             HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence            000111111111    111222567788999999999999999999999974

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-38  Score=342.77  Aligned_cols=239  Identities=29%  Similarity=0.429  Sum_probs=194.6

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      +....++||+|+||.||+|.+..                       ...+|.+|+++|++++|||||+++|++.....++
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~  237 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM  237 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence            33445899999999999997632                       3467889999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +|||+|.||+|++||.+... .++..++++++.+.|+||+|||+   +.++||||.++|+|++.++.+||+||||++...
T Consensus       238 ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~  313 (474)
T KOG0194|consen  238 LVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS  313 (474)
T ss_pred             EEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence            99999999999999988764 69999999999999999999999   999999999999999999999999999987543


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      . .........-+..|+|||.+..+.++.++|||||||++||+++ |..||.+.... ...++.   .         ...
T Consensus       314 ~-~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~---~---------~~~  380 (474)
T KOG0194|consen  314 Q-YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV---K---------NGY  380 (474)
T ss_pred             c-eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH---h---------cCc
Confidence            1 1111112245689999999999999999999999999999999 89999863322 111110   1         111


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      +...+...+..+..++..||..+|++||+|.++.+.|+...
T Consensus       381 r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~  421 (474)
T KOG0194|consen  381 RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALE  421 (474)
T ss_pred             cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence            11222233456677778999999999999999999997653

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=2.8e-37  Score=325.12  Aligned_cols=244  Identities=25%  Similarity=0.406  Sum_probs=191.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------------------hHHHHHHHHHHHhccccCceeee
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------------------RMREFAAEIESLGRLRHKHLVNL  408 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------------------~~~~f~~Ei~~L~~l~H~nIv~l  408 (670)
                      ++|...++||+|+||.||++.+..                                 ...+|.+|++++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            568888999999999999986311                                 23468899999999999999999


Q ss_pred             eeeeeccCeeEEEEeccCCCCchhhcccCC-----------------ccccCHHHHHHHHHHHHHHhhhccccccceEEe
Q 035655          409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-----------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH  471 (670)
Q Consensus       409 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH  471 (670)
                      ++++.+.+..++||||+++|+|.+++....                 ...++|.++++++.||+.||.|||+   .+|+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence            999999999999999999999999985421                 1247889999999999999999998   89999


Q ss_pred             cccCCCcEEecCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh--CCCC
Q 035655          472 RDVKSGNVLIDADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT--GRRP  548 (670)
Q Consensus       472 rDIkp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t--G~~p  548 (670)
                      |||||+|||++.++.+||+|||+++........ ......++..|+|||++.++.++.++|||||||+++||++  +..|
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p  241 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP  241 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence            999999999999999999999999865443221 1223456789999999988899999999999999999987  5667


Q ss_pred             CCCCc-chhHHHHHHHhhcC-CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          549 IDSDH-FILVDWVLEFQHLG-QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       549 f~~~~-~~~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      |.... ......+....... .......       +......+.+++.+||+.+|.+||+++||.+.|+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         242 YGELTDEQVIENAGEFFRDQGRQVYLFR-------PPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCcCCHHHHHHHHHHHhhhccccccccC-------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            76422 11222221111111 0000001       1122356789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-37  Score=327.66  Aligned_cols=238  Identities=26%  Similarity=0.375  Sum_probs=197.4

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccchH-------------------HHHHHHHHHHhcc-ccCceeeeeeeeeccCee
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPTRM-------------------REFAAEIESLGRL-RHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~~~-------------------~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~  418 (670)
                      ...++|..++.||+|.|++|++|+.....                   +....|-.+|.+| .||.|++|+--|++...+
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            34567888999999999999999876522                   2344788899999 799999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      |+|+||++||+|.++|++.+  .+++...+-++.+|+.||+|||+   .|||||||||+|||||++|++||.|||-|+.+
T Consensus       150 YFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             EEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccC
Confidence            99999999999999997764  58999999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCcc----------e--eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhc
Q 035655          499 DHGKIS----------H--TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHL  566 (670)
Q Consensus       499 ~~~~~~----------~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~  566 (670)
                      ......          .  ....+||..|.+||++.....+..+|+|+||||||+|+.|+.||......+.-     +  
T Consensus       225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliF-----q--  297 (604)
T KOG0592|consen  225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIF-----Q--  297 (604)
T ss_pred             ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHH-----H--
Confidence            643221          1  14479999999999999999999999999999999999999999875433221     1  


Q ss_pred             CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       567 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                       +++ .++-.+...+    .+.+.+|+...|..||.+|++.+||.+|.
T Consensus       298 -kI~-~l~y~fp~~f----p~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp  339 (604)
T KOG0592|consen  298 -KIQ-ALDYEFPEGF----PEDARDLIKKLLVRDPSDRLTSQQIKAHP  339 (604)
T ss_pred             -HHH-HhcccCCCCC----CHHHHHHHHHHHccCccccccHHHHhhCc
Confidence             111 1122222223    35667788888999999999999999875

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.5e-37  Score=319.20  Aligned_cols=241  Identities=26%  Similarity=0.432  Sum_probs=197.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..++||+|+||.||+|....              ..+.+.+|+.++++++|+||+++++.+...+..++++||++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            3578889999999999999997543              24578899999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.+.....+++.+++.++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++...........
T Consensus        85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05072          85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR  161 (261)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence            9999999977655678999999999999999999998   8999999999999999999999999999987654332222


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....++..|+|||++..+.++.++|||||||+++||++ |+.||.......  ...... ...     .....    ...
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~-~~~-----~~~~~----~~~  229 (261)
T cd05072         162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSALQ-RGY-----RMPRM----ENC  229 (261)
T ss_pred             CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHHH-cCC-----CCCCC----CCC
Confidence            33456778999999998889999999999999999998 999997532211  111111 110     01111    112


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+.+++.+|++++|++||+++++.+.|+.
T Consensus       230 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         230 PDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            3567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-37  Score=330.34  Aligned_cols=241  Identities=23%  Similarity=0.330  Sum_probs=197.5

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccC
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKR  416 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~  416 (670)
                      ....+|...+.||+|.||+|++|....                     ..+.+.+|+.++++++ ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            345689999999999999999996532                     1234558999999999 999999999999999


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-CcEEEEeecCc
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLA  495 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-~~~kL~DFGla  495 (670)
                      ..++||||+.+|+|.+++.+  ..++.+.+...++.|+++|++|||+   ++|+||||||+|||+|.+ +++||+|||++
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s  168 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLS  168 (370)
T ss_pred             eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence            99999999999999999977  3468999999999999999999999   999999999999999999 99999999999


Q ss_pred             eeccCCCcceeeccccCcCCCCccccccCC-CC-ccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccccc
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELARTGK-AS-CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV  573 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~t-~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  573 (670)
                      .... .......+.+||+.|+|||++.+.. |+ .++||||+|++||.|++|+.||+.........  . ...++   ..
T Consensus       169 ~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~--k-i~~~~---~~  241 (370)
T KOG0583|consen  169 AISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYR--K-IRKGE---FK  241 (370)
T ss_pred             cccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHH--H-HhcCC---cc
Confidence            9874 2223455679999999999999877 76 78999999999999999999998743221111  1 11111   00


Q ss_pred             CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       574 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      -|.   ...   ...+..++..|+..||.+|+++.+++++=+-.
T Consensus       242 ~p~---~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~  279 (370)
T KOG0583|consen  242 IPS---YLL---SPEARSLIEKMLVPDPSTRITLLEILEHPWFQ  279 (370)
T ss_pred             CCC---CcC---CHHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence            111   111   45678899999999999999999999875544

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.7e-37  Score=319.57  Aligned_cols=240  Identities=25%  Similarity=0.410  Sum_probs=196.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .+|...+.||+|+||.||+|...+               ..+++.+|++++++++||||++++++|......++||||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            457788999999999999997643               24578899999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.......+++..++.++.|+++||+|||+   .+++||||||+||++++++.+||+|||++...........
T Consensus        86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~  162 (263)
T cd05052          86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  162 (263)
T ss_pred             CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence            9999999977655679999999999999999999998   8999999999999999999999999999987654332222


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....++..|+|||.+.+..++.++|||||||+++||++ |..||......  +....... .     ..+    ..+...
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~-~-----~~~----~~~~~~  230 (263)
T cd05052         163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK-G-----YRM----ERPEGC  230 (263)
T ss_pred             CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHC-C-----CCC----CCCCCC
Confidence            22344678999999998899999999999999999998 99998753321  11111111 0     111    111223


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+.+++.+||+.+|++||++.++++.|+.
T Consensus       231 ~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         231 PPKVYELMRACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence            3567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2e-37  Score=322.27  Aligned_cols=240  Identities=26%  Similarity=0.459  Sum_probs=194.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      ++|+..+.||+|+||.||+|....                      ....|.+|++++++++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            467888999999999999986421                      1346889999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCc--------------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          420 LVYDYIPNGSLDSLLFDNEN--------------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                      ++|||+++++|.+++.....              ..+++.+++.++.|++.||.|||+   .+++||||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCC
Confidence            99999999999999965321              458899999999999999999998   8999999999999999999


Q ss_pred             cEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHH
Q 035655          486 NARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEF  563 (670)
Q Consensus       486 ~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~  563 (670)
                      .+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||+++||++ |..||......  +. ...
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~-~~~  238 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EV-IEM  238 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HH-HHH
Confidence            999999999986543221 22233466889999999988899999999999999999998 99998753221  11 111


Q ss_pred             hhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       564 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+..         ...+...+..+.+++.+||+.||.+||+++||+++|++
T Consensus       239 i~~~~~---------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         239 IRSRQL---------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHcCCc---------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            111111         11222344678899999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=7.4e-38  Score=322.17  Aligned_cols=234  Identities=32%  Similarity=0.550  Sum_probs=185.3

Q ss_pred             ccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          366 QSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ..+.||+|.||.||+|.+..                     ..++|.+|++.+++++||||++++|+|...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            46789999999999998761                     247899999999999999999999999988889999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc-
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-  503 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~-  503 (670)
                      +++|+|.++|.......+++.++.+|+.||++||.|||+   .+++|+||+++||++++++.+||+|||++........ 
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             ccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence            999999999988755679999999999999999999998   8999999999999999999999999999987733222 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                      ...........|+|||.+....++.++||||||+++|||++ |+.||.....  .+..... .......         .+
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--~~~~~~~-~~~~~~~---------~~  227 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--EEIIEKL-KQGQRLP---------IP  227 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--HHHHHHH-HTTEETT---------SB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccc-cccccce---------ec
Confidence            22233467789999999999889999999999999999999 7889865322  2222222 1111111         11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ......+.+++..||+.+|.+||+++++++.|
T Consensus       228 ~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  228 DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            12235677899999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.6e-37  Score=316.61  Aligned_cols=241  Identities=28%  Similarity=0.434  Sum_probs=196.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..+.||+|++|.||+|....              ..++|.+|++++++++||||+++++++...+..++||||++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK   84 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence            4568889999999999999987533              24678899999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.......+++..+.+++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++..........
T Consensus        85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05068          85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR  161 (261)
T ss_pred             CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence            9999999977655578999999999999999999998   8999999999999999999999999999987754322222


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .....+..|+|||++.+..++.++||||||++++||++ |+.||.......   ........ .    .    ...+...
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~-~----~----~~~~~~~  229 (261)
T cd05068         162 EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQQVDQG-Y----R----MPCPPGC  229 (261)
T ss_pred             CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHcC-C----C----CCCCCcC
Confidence            22233468999999998899999999999999999999 999997533211   11111111 0    0    0111223


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+.+.+++.+|++.+|.+||+++++++.|+.
T Consensus       230 ~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         230 PKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            4678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-37  Score=331.16  Aligned_cols=234  Identities=24%  Similarity=0.389  Sum_probs=197.3

Q ss_pred             CccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .|....+||+|.-|.||.+....                ..+-..+|+.+|+.++|+|||++++.+..++++++|||||+
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~  353 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME  353 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence            45666889999999999986533                23446799999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +|+|.+.+...   .+++.++..|+.++++||+|||.   ++|+|||||.+||||+.++.+||+|||++..+..... ..
T Consensus       354 ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR  426 (550)
T KOG0578|consen  354 GGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KR  426 (550)
T ss_pred             CCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccC-cc
Confidence            99999998543   48999999999999999999999   9999999999999999999999999999988766543 55


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...+||+.|||||++....|.+|.||||||++++||+-|..||-.+......|...  ..+      .|++  ..+....
T Consensus       427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa--~ng------~P~l--k~~~klS  496 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA--TNG------TPKL--KNPEKLS  496 (550)
T ss_pred             ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh--hcC------CCCc--CCccccC
Confidence            66799999999999999999999999999999999999999997655433333211  111      1222  2233445


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..+.+++.+||+.|+.+||++.|+|+|
T Consensus       497 ~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  497 PELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            678889999999999999999999985

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=5.9e-37  Score=319.54  Aligned_cols=247  Identities=23%  Similarity=0.292  Sum_probs=191.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|+..+.||+|+||.||+++...                  ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            468899999999999999998743                  13457789999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |++++.|..+...  ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........
T Consensus        81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  155 (287)
T cd07848          81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN  155 (287)
T ss_pred             cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence            9998877655432  2358999999999999999999998   8999999999999999999999999999987654333


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHH-HHHH------------HhhcCCcc
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVD-WVLE------------FQHLGQVL  570 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~-~~~~------------~~~~~~~~  570 (670)
                      .......||+.|+|||++.+..++.++|||||||+++||++|+.||......... ....            ........
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07848         156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH  235 (287)
T ss_pred             ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence            3334457899999999999888999999999999999999999999763221100 0000            00000000


Q ss_pred             cccCCCCC------CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 DVVDPNLG------SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ~~~d~~l~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+...      ..+.......+.+++..||+.||++||+++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            00001110      00111134568899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=6.8e-38  Score=330.06  Aligned_cols=233  Identities=27%  Similarity=0.398  Sum_probs=197.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|.+.+.||+|.||.||||+-+.                  ..+...+|++++++|+||||+.+++||+...++++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            578888999999999999997644                  23457899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+.+ +|..+|...  ..++++.+..++.++..||.|||+   .+|+|||+||.||||+..+.+|++|||+|+.+..+. 
T Consensus        82 ~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t-  154 (808)
T KOG0597|consen   82 YAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT-  154 (808)
T ss_pred             hhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccCc-
Confidence            9976 999999665  459999999999999999999999   999999999999999999999999999999887644 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      ...+...||+-|||||+..+++|+..+|.||+||++||+++|++||.....  ...+.....        ||.   .++.
T Consensus       155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si--~~Lv~~I~~--------d~v---~~p~  221 (808)
T KOG0597|consen  155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI--TQLVKSILK--------DPV---KPPS  221 (808)
T ss_pred             eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH--HHHHHHHhc--------CCC---CCcc
Confidence            445667999999999999999999999999999999999999999975321  111111111        111   1223


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .....+..++...+++||..|.+..+++.|-
T Consensus       222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp  252 (808)
T KOG0597|consen  222 TASSSFVNFLQGLLIKDPAQRLTWTDLLGHP  252 (808)
T ss_pred             cccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence            4456677888889999999999999999863

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=6.7e-37  Score=319.45  Aligned_cols=232  Identities=18%  Similarity=0.282  Sum_probs=186.9

Q ss_pred             cceEeeeCceeEEEeeccc--------------h---HHHHHHHHHHHhccccCceeeeeeeeec----cCeeEEEEecc
Q 035655          367 SEVIGTGGFGEVYKGVLPT--------------R---MREFAAEIESLGRLRHKHLVNLQGWCKR----KRDLLLVYDYI  425 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~--------------~---~~~f~~Ei~~L~~l~H~nIv~l~g~~~~----~~~~~lV~E~~  425 (670)
                      ...||+|+++.||+|....              .   .+.|.+|+.+|++++||||++++|++.+    ....++||||+
T Consensus        25 ~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         25 SVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             CeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            3679999999999998643              1   3567799999999999999999999876    35789999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++|+|.+++.+.  ..++|....+++.|++.||.|||+.  .+++||||||+|||++.++.+||+|||+++......   
T Consensus       105 ~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---  177 (283)
T PHA02988        105 TRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---  177 (283)
T ss_pred             CCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---
Confidence            999999999764  3689999999999999999999972  478899999999999999999999999998654321   


Q ss_pred             eeccccCcCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          506 TTNVVGTIGYIAPELART--GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                       ....|+..|+|||++.+  ..++.++|||||||++|||++|+.||......  +..........     .+.+    +.
T Consensus       178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--~~~~~i~~~~~-----~~~~----~~  245 (283)
T PHA02988        178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--EIYDLIINKNN-----SLKL----PL  245 (283)
T ss_pred             -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhcCC-----CCCC----CC
Confidence             23468899999999876  68899999999999999999999999864321  11111111110     1111    11


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .....+.+++.+||+.||.+||+++|+++.|+..
T Consensus       246 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        246 DCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            2345688899999999999999999999998754

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=4.2e-37  Score=315.20  Aligned_cols=237  Identities=26%  Similarity=0.465  Sum_probs=192.9

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++|+..+.||+|+||.||++....              ...+|.+|++++++++||||++++++|...+..++||||+++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~   83 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN   83 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence            457888999999999999987643              245788999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++.... ..+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||+++...........
T Consensus        84 ~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05114          84 GCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS  159 (256)
T ss_pred             CcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence            99999987543 358999999999999999999998   89999999999999999999999999999765433322222


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcc-hhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHF-ILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ...++..|+|||++.+..++.++||||||++++||++ |+.||..... ......   .....   ...+..       .
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i---~~~~~---~~~~~~-------~  226 (256)
T cd05114         160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI---SRGFR---LYRPKL-------A  226 (256)
T ss_pred             CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---HCCCC---CCCCCC-------C
Confidence            3345678999999988889999999999999999999 8999975432 111111   11111   111111       2


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...+.+++.+||+.+|.+||+++++++.|.
T Consensus       227 ~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         227 SMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            246789999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.4e-36  Score=324.24  Aligned_cols=248  Identities=21%  Similarity=0.290  Sum_probs=193.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..+.||+|+||.||++....                 ..+.+.+|+++|++++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            3678999999999999999987643                 13468899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++|+|.+++....  .+++..+..++.|++.||.|||+  ..+|+||||||+|||++.++.+||+|||++......  
T Consensus        84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  157 (331)
T cd06649          84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  157 (331)
T ss_pred             cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence            999999999996543  58999999999999999999997  246999999999999999999999999999765432  


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhh-c--CCcc----------
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQH-L--GQVL----------  570 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~-~--~~~~----------  570 (670)
                       ......||..|+|||++.+..++.++|||||||++|||++|+.||................ .  ....          
T Consensus       158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (331)
T cd06649         158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP  236 (331)
T ss_pred             -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence             2234578999999999999899999999999999999999999997533211111000000 0  0000          


Q ss_pred             ---------------------c-ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          571 ---------------------D-VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       571 ---------------------~-~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                                           + +................+.+++.+||+.||++||+++|++++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~  303 (331)
T cd06649         237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF  303 (331)
T ss_pred             cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence                                 0 00000000000112356889999999999999999999998764

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1e-36  Score=330.80  Aligned_cols=242  Identities=24%  Similarity=0.385  Sum_probs=191.6

Q ss_pred             hcCccccceEeeeCceeEEEeecc-----c-----------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP-----T-----------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~-----~-----------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~  417 (670)
                      .++|+..++||+|+||.||+|...     +                 ..+.+.+|+.+++.+ +||||++++++|.+.+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            457888999999999999998531     0                 234678999999999 89999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCC-----------------------------------------------------------
Q 035655          418 LLLVYDYIPNGSLDSLLFDNE-----------------------------------------------------------  438 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~-----------------------------------------------------------  438 (670)
                      .++||||+++|+|.+++....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            999999999999999986422                                                           


Q ss_pred             --------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          439 --------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       439 --------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                                    ...++|..+++++.||+.||+|||+   ++++||||||+|||++.++.+||+|||+++........
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence                          1247899999999999999999998   89999999999999999999999999999866443221


Q ss_pred             e-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          505 H-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       505 ~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                      . .....++..|+|||++.+..++.++|||||||+++||++ |..||........ .. .....+..  ...+.      
T Consensus       271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~-~~~~~~~~--~~~~~------  340 (375)
T cd05104         271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FY-KMIKEGYR--MLSPE------  340 (375)
T ss_pred             cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HH-HHHHhCcc--CCCCC------
Confidence            1 122345678999999999999999999999999999998 8889865321111 11 11111100  00111      


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       .....+.+++.+||+.||++||++.||++.|+.
T Consensus       341 -~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         341 -CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             -CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence             113467889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-38  Score=331.90  Aligned_cols=238  Identities=25%  Similarity=0.406  Sum_probs=207.7

Q ss_pred             CccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++...++||-|.||.||.|++++               ..++|..|..+|+.++|||+|+|+|+|.....+|||.|||.+
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y  347 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY  347 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence            45567899999999999999876               357899999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+||++..+..++-...+.++.||++||.||..   +.+|||||.++|+|+.++..+|++||||++++..+......
T Consensus       348 GNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA  424 (1157)
T KOG4278|consen  348 GNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHA  424 (1157)
T ss_pred             ccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCceeccc
Confidence            999999998888788999999999999999999998   89999999999999999999999999999999876655444


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...-.+.|.|||-+....++.|+|||+||++||||.| |..||.+-+...+            .+.+...++.+-+..++
T Consensus       425 GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV------------Y~LLEkgyRM~~PeGCP  492 (1157)
T KOG4278|consen  425 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------------YGLLEKGYRMDGPEGCP  492 (1157)
T ss_pred             CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH------------HHHHhccccccCCCCCC
Confidence            4556789999999999999999999999999999999 9999986433211            12223334445566677


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..+.+|+++||+-+|.+||+++|+-+.++
T Consensus       493 pkVYeLMraCW~WsPsDRPsFaeiHqafE  521 (1157)
T KOG4278|consen  493 PKVYELMRACWNWSPSDRPSFAEIHQAFE  521 (1157)
T ss_pred             HHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence            88999999999999999999999988775

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=3.4e-37  Score=334.46  Aligned_cols=243  Identities=25%  Similarity=0.411  Sum_probs=191.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccC
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKR  416 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~  416 (670)
                      ..++|+..+.||+|+||.||+++...                      ....+.+|+.+++.+ +||||++++++|...+
T Consensus        36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~  115 (374)
T cd05106          36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG  115 (374)
T ss_pred             cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence            34578899999999999999876311                      124578999999999 8999999999999999


Q ss_pred             eeEEEEeccCCCCchhhcccCC----------------------------------------------------------
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNE----------------------------------------------------------  438 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------  438 (670)
                      ..++||||+++|+|.+++....                                                          
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence            9999999999999999985421                                                          


Q ss_pred             ----------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc-eee
Q 035655          439 ----------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS-HTT  507 (670)
Q Consensus       439 ----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~  507 (670)
                                ...+++.++++++.||+.||.|||+   ++|+||||||+|||+++++.+||+|||+++........ ...
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~  272 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG  272 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence                      1247889999999999999999998   89999999999999999999999999999865443221 112


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...++..|||||++.+..++.++|||||||++|||++ |+.||....... ... .....+  .....+       ....
T Consensus       273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~-~~~~~~--~~~~~~-------~~~~  341 (374)
T cd05106         273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFY-KMVKRG--YQMSRP-------DFAP  341 (374)
T ss_pred             CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHH-HHHHcc--cCccCC-------CCCC
Confidence            2345678999999998899999999999999999997 999997532211 111 111111  000111       1123


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+++..||+.||.+||++.++++.|+.
T Consensus       342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~  371 (374)
T cd05106         342 PEIYSIMKMCWNLEPTERPTFSQISQLIQR  371 (374)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=7.3e-37  Score=315.24  Aligned_cols=239  Identities=28%  Similarity=0.512  Sum_probs=194.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+|.+..                    ...+|.+|+.++++++||||+++++++.+.+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            3578889999999999999987531                    23568899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++++|.+++..... .+++.++++++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++....
T Consensus        83 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  158 (266)
T cd05033          83 ITEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED  158 (266)
T ss_pred             EEEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence            9999999999999976543 68999999999999999999998   9999999999999999999999999999987752


Q ss_pred             CCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCCC
Q 035655          501 GKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       501 ~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      .... ......++..|+|||.+.+..++.++||||||++++||++ |..||...... .....    .....    .+  
T Consensus       159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~----~~~~~----~~--  228 (266)
T cd05033         159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV----EDGYR----LP--  228 (266)
T ss_pred             cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH----HcCCC----CC--
Confidence            2211 1222345678999999998899999999999999999998 99998653211 11111    11100    00  


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                         .+......+.+++.+||+.+|++||+++|++++|+.
T Consensus       229 ---~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~  264 (266)
T cd05033         229 ---PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK  264 (266)
T ss_pred             ---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence               111234567899999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-37  Score=328.89  Aligned_cols=247  Identities=29%  Similarity=0.426  Sum_probs=201.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ....+.++||+|.||+|.++....                ..++|.+|+++|.+|+||||++|+|+|..++.+++|+|||
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm  617 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM  617 (807)
T ss_pred             hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence            345678999999999999987543                3578999999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC-cc
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK-IS  504 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~-~~  504 (670)
                      ++|+|.+||.++....+.-.....|+.|||+||+||.+   ..+|||||.++|+|+|.++++||+|||+++....+. ..
T Consensus       618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~  694 (807)
T KOG1094|consen  618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR  694 (807)
T ss_pred             hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence            99999999988865555667778899999999999999   999999999999999999999999999999655444 33


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCC-cchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT--GRRPIDSD-HFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t--G~~pf~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      .....+-+.+|||||.+..++++.++|||+||+.+||+++  ..+||+.- +...++-...+...+      .+......
T Consensus       695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~------~~~~~l~~  768 (807)
T KOG1094|consen  695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQ------GRQVVLSR  768 (807)
T ss_pred             eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCC------CcceeccC
Confidence            3445567889999999999999999999999999999754  88898752 222222222221111      11111223


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      +.-++..+.++++.||..+..+||+++++..+|..+
T Consensus       769 P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  769 PPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             CCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            344567788999999999999999999999999754

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-37  Score=326.42  Aligned_cols=240  Identities=24%  Similarity=0.311  Sum_probs=193.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||+|....                   ..+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            468899999999999999997643                   1245778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....  
T Consensus        81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--  153 (333)
T cd05600          81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--  153 (333)
T ss_pred             eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence            999999999999654  358999999999999999999998   8999999999999999999999999999975543  


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                        ......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ............  .+.. ....
T Consensus       154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~~~~~--~~~~-~~~~  226 (333)
T cd05600         154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET--WENLKYWKETLQ--RPVY-DDPR  226 (333)
T ss_pred             --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH--HHHHHhcccccc--CCCC-Cccc
Confidence              23345799999999999998999999999999999999999999976432111  111111011110  1111 0000


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ......+.+++..||+.+|.+||++++++++-.
T Consensus       227 ~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~  259 (333)
T cd05600         227 FNLSDEAWDLITKLINDPSRRFGSLEDIKNHPF  259 (333)
T ss_pred             cccCHHHHHHHHHHhhChhhhcCCHHHHHhCcc
Confidence            123456778889999999999999999998743

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=9.5e-37  Score=318.46  Aligned_cols=246  Identities=24%  Similarity=0.334  Sum_probs=186.9

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc---ccCceeeeeeeee-----c
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL---RHKHLVNLQGWCK-----R  414 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l---~H~nIv~l~g~~~-----~  414 (670)
                      ++|+..+.||+|+||.||++....                   ....+.+|+.+++++   +||||++++++|.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            368889999999999999997521                   113466788777766   6999999999985     2


Q ss_pred             cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                      ....++|+||++ ++|.+++.......+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~  156 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL  156 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence            456899999996 699999977655678999999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhc---CCc-
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHL---GQV-  569 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~---~~~-  569 (670)
                      ++.....  .......||+.|+|||.+.+..++.++|||||||+++||++|+.||..... ............   ... 
T Consensus       157 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~  234 (290)
T cd07862         157 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  234 (290)
T ss_pred             eEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence            9866543  223345789999999999888999999999999999999999999976322 111111111000   000 


Q ss_pred             ------ccccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 ------LDVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ------~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                            .....+...   ........+.+.+++.+|++.||++||++.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence                  000000000   00111223566789999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=8.7e-37  Score=313.34  Aligned_cols=237  Identities=30%  Similarity=0.461  Sum_probs=192.7

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++|...+.||+|+||.||++....              ...+|.+|+.++++++||||++++++|.+....++||||+++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            457788999999999999996532              235788999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++..... .+++.++++++.||+.||+|||+   .+++|+||||+||+++.++.+||+|||+++...........
T Consensus        84 ~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05113          84 GCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV  159 (256)
T ss_pred             CcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence            999999976543 68999999999999999999998   89999999999999999999999999999866443322222


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ...++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .....    ..+..     +..    +...
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~----~~~~~-----~~~----~~~~  226 (256)
T cd05113         160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV----SQGLR-----LYR----PHLA  226 (256)
T ss_pred             CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH----hcCCC-----CCC----CCCC
Confidence            3345678999999988889999999999999999999 99998753321 11111    11110     000    1112


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...+.+++..||+.+|.+||++.++++.|+
T Consensus       227 ~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         227 SEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            367789999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-36  Score=314.91  Aligned_cols=255  Identities=31%  Similarity=0.431  Sum_probs=196.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------hHHHHHHHHHHHh--ccccCceeeeeeeeeccC----eeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------RMREFAAEIESLG--RLRHKHLVNLQGWCKRKR----DLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~L~--~l~H~nIv~l~g~~~~~~----~~~lV~E  423 (670)
                      ....+..+.||+|+||.||||.+..           ..+.|.+|-++.+  .++|+||+++++.-+...    +++||+|
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~  288 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE  288 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence            4456667899999999999998765           4567887766655  568999999999877665    8999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcccc------ccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE------WEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~------~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      |.++|||.+||..+   .++|....+|+..+++||+|||++      .+++|+|||||++|||+.+|+.+.|+|||||..
T Consensus       289 fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~  365 (534)
T KOG3653|consen  289 FHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR  365 (534)
T ss_pred             eccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence            99999999999655   689999999999999999999985      367899999999999999999999999999998


Q ss_pred             ccCCCcc-eeeccccCcCCCCccccccC-CC-----CccchhHHHHHHHHHHHhCCCCCCC---------------Ccch
Q 035655          498 FDHGKIS-HTTNVVGTIGYIAPELARTG-KA-----SCSTDVFAYGVLLLEIATGRRPIDS---------------DHFI  555 (670)
Q Consensus       498 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~-----t~ksDV~S~Gvvl~el~tG~~pf~~---------------~~~~  555 (670)
                      +..+... .....+||.+|||||++.+. .+     -.+.||||+|.|||||++....++.               .+. 
T Consensus       366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hP-  444 (534)
T KOG3653|consen  366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHP-  444 (534)
T ss_pred             ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCC-
Confidence            8765432 23447999999999998754 12     2479999999999999996654421               011 


Q ss_pred             hHHHHHHHhhcCCcccccCCCCCCccc-HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCCCCCC
Q 035655          556 LVDWVLEFQHLGQVLDVVDPNLGSSYV-VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPII  623 (670)
Q Consensus       556 ~~~~~~~~~~~~~~~~~~d~~l~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~~  623 (670)
                      ..+-++....    .+...|.+..... ...+..+.+.+..||..||+.|-|+.=+.+.+.....+.+.
T Consensus       445 t~e~mq~~VV----~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  445 TLEEMQELVV----RKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             CHHHHHHHHH----hhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence            1111111111    1122333322111 13467788999999999999999999999998877666553

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=5.3e-37  Score=315.02  Aligned_cols=240  Identities=29%  Similarity=0.506  Sum_probs=198.5

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +..+|+..++||+|+||.||+|....               ...++.+|+.++++++||||+++++++...+..++||||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            35678889999999999999987643               245788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.+.....+++.+++.++.|++.||.|||+   .+++||||||+||++++++.+||+|||++.........
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~  160 (261)
T cd05148          84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL  160 (261)
T ss_pred             cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence            999999999987666679999999999999999999998   89999999999999999999999999999766443221


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       .....++..|+|||.+.+..++.++||||||+++++|++ |+.||...... .....   .. .         .....+
T Consensus       161 -~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~---~~-~---------~~~~~~  226 (261)
T cd05148         161 -SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI---TA-G---------YRMPCP  226 (261)
T ss_pred             -ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH---Hh-C---------CcCCCC
Confidence             223356778999999988899999999999999999998 89999753321 11111   11 0         001112


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......+.+++.+||+.+|.+||+++++++.|+.
T Consensus       227 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         227 AKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            2334567899999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.3e-37  Score=319.87  Aligned_cols=232  Identities=23%  Similarity=0.286  Sum_probs=190.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                   ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            368889999999999999998652                   1235778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++..+..++.|++.||+|||+   ++++||||||+|||++.++.+||+|||+++..... 
T Consensus        81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-  154 (291)
T cd05612          81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-  154 (291)
T ss_pred             eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence            999999999999654  358999999999999999999998   99999999999999999999999999999865432 


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                         .....||+.|+|||++.+..++.++|||||||+++||++|+.||.......  ..... ..+.      ..    ++
T Consensus       155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~--~~~~i-~~~~------~~----~~  218 (291)
T cd05612         155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG--IYEKI-LAGK------LE----FP  218 (291)
T ss_pred             ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH-HhCC------cC----CC
Confidence               223578999999999998889999999999999999999999997643211  11111 1111      11    11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPT-----MRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~  615 (670)
                      ......+.+++..||+.||.+||+     ++++++|-+
T Consensus       219 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~  256 (291)
T cd05612         219 RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW  256 (291)
T ss_pred             ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcc
Confidence            112345778999999999999995     888887654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.4e-36  Score=321.61  Aligned_cols=248  Identities=21%  Similarity=0.313  Sum_probs=192.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..++||+|+||.||++....                 ....+.+|++++++++||||++++++|.+++..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            4678999999999999999987642                 12468899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++|+|.+++...  ..+++..+..++.|++.||.|||+  ..+++||||||+|||++.++.+||+|||++......  
T Consensus        84 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--  157 (333)
T cd06650          84 HMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  157 (333)
T ss_pred             cCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--
Confidence            99999999999654  358999999999999999999997  247999999999999999999999999998755332  


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc------------
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD------------  571 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~------------  571 (670)
                       ......|+..|+|||++.+..++.++|||||||++|||++|+.||.................+....            
T Consensus       158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (333)
T cd06650         158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGR  236 (333)
T ss_pred             -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccc
Confidence             1233468999999999998889999999999999999999999997533221111111000000000            


Q ss_pred             ---ccCCCCC-----------------Cccc-HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          572 ---VVDPNLG-----------------SSYV-VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       572 ---~~d~~l~-----------------~~~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                         ...+...                 ...+ ......+.+++.+||+.||.+||+++|++++-.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~  301 (333)
T cd06650         237 PLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF  301 (333)
T ss_pred             hhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence               0000000                 0000 012245789999999999999999999998643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.9e-37  Score=295.27  Aligned_cols=236  Identities=24%  Similarity=0.361  Sum_probs=201.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|++++.||+|.||.||.|+.++                   ..+++.+|+++-+.|+||||+++++||.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            4578999999999999999998765                   246788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +||.++|+|...|.......+++.....++.|+|.||.|+|.   ++|+||||||+|+|++..+..||+|||.+..... 
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~-  176 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-  176 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecCC-
Confidence            999999999999987777779999999999999999999998   9999999999999999999999999999976543 


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                        ....+.+||..|++||...+..++.+.|+|++|++.+|++.|..||+.....  +    ....-.-.+..+|      
T Consensus       177 --~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~--e----tYkrI~k~~~~~p------  242 (281)
T KOG0580|consen  177 --NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS--E----TYKRIRKVDLKFP------  242 (281)
T ss_pred             --CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH--H----HHHHHHHccccCC------
Confidence              3456679999999999999999999999999999999999999999863311  1    1111111122222      


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                       ........+++..|+..+|.+|....|+++|-+
T Consensus       243 -~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw  275 (281)
T KOG0580|consen  243 -STISGGAADLISRLLVKNPIERLALTEVMDHPW  275 (281)
T ss_pred             -cccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence             233456778999999999999999999998754

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-36  Score=312.33  Aligned_cols=237  Identities=26%  Similarity=0.422  Sum_probs=191.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      .+|+..+.||+|+||.||++....              ....|.+|++++++++||||+++++++...+..++|+||+++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            357788999999999999987532              235788999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|.+++..+.. .+++..++.++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++...........
T Consensus        84 ~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (256)
T cd05059          84 GCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ  159 (256)
T ss_pred             CCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence            999999976543 68999999999999999999998   89999999999999999999999999999865433222222


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...++..|+|||.+.+..++.++||||||+++|||++ |+.||.......  ....... .     ....    .+....
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~-~-----~~~~----~~~~~~  227 (256)
T cd05059         160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVESVSA-G-----YRLY----RPKLAP  227 (256)
T ss_pred             CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHHHHc-C-----CcCC----CCCCCC
Confidence            2234568999999998899999999999999999999 899987532211  1111111 0     1111    111234


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ..+.+++.+||+.+|++||++.|+++.|
T Consensus       228 ~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         228 TEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            5688999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.3e-36  Score=327.42  Aligned_cols=249  Identities=20%  Similarity=0.232  Sum_probs=191.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCch
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLD  431 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~  431 (670)
                      ++|+..++||+|+||.||++....          ....+.+|++++++|+||||+++++++......++|+|++. ++|.
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~  170 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLY  170 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHH
Confidence            579999999999999999998754          23457899999999999999999999999999999999995 7898


Q ss_pred             hhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeecccc
Q 035655          432 SLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG  511 (670)
Q Consensus       432 ~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~g  511 (670)
                      +++...  ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..............|
T Consensus       171 ~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g  245 (391)
T PHA03212        171 CYLAAK--RNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAG  245 (391)
T ss_pred             HHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccC
Confidence            888654  358999999999999999999998   899999999999999999999999999997543322223344679


Q ss_pred             CcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc--------hhHHHHHHHhhc----------CCcc---
Q 035655          512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF--------ILVDWVLEFQHL----------GQVL---  570 (670)
Q Consensus       512 t~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~--------~~~~~~~~~~~~----------~~~~---  570 (670)
                      |+.|+|||++.+..++.++|||||||++|||++|+.|+.....        ............          ..+.   
T Consensus       246 t~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~  325 (391)
T PHA03212        246 TIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIY  325 (391)
T ss_pred             ccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHH
Confidence            9999999999988999999999999999999999988643110        000000000000          0000   


Q ss_pred             ------cccCCCCCCcc--cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          571 ------DVVDPNLGSSY--VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       571 ------~~~d~~l~~~~--~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                            ....+......  .......+.+++.+||+.||.+|||++|++++-.-
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f  379 (391)
T PHA03212        326 IGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAF  379 (391)
T ss_pred             HHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhh
Confidence                  00001000000  11234568889999999999999999999986543

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.3e-36  Score=324.18  Aligned_cols=231  Identities=23%  Similarity=0.276  Sum_probs=190.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||+|....                   ..+.+.+|+.++++++||||+++++++.+++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            568889999999999999997643                   1245778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++.+.  ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        98 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~  172 (329)
T PTZ00263         98 EFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT  172 (329)
T ss_pred             cCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence            999999999999754  358899999999999999999999   899999999999999999999999999998664322


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                          ....||+.|+|||++.+..++.++|||||||++|||++|+.||........  . .....+.      ..+    +
T Consensus       173 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~-~~i~~~~------~~~----p  235 (329)
T PTZ00263        173 ----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI--Y-EKILAGR------LKF----P  235 (329)
T ss_pred             ----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH--H-HHHhcCC------cCC----C
Confidence                235799999999999998999999999999999999999999976432110  0 1111111      011    1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHh
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPT-----MRQVLRYL  614 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  614 (670)
                      ......+.+++..||+.||.+||+     ++++++|-
T Consensus       236 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp  272 (329)
T PTZ00263        236 NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP  272 (329)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence            112245678999999999999986     78888774

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.3e-36  Score=323.32  Aligned_cols=228  Identities=22%  Similarity=0.265  Sum_probs=185.7

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      +.||+|+||.||++....                   ....+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999987643                   1235678999999999999999999999999999999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeec
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      +|.+++...  ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~  154 (323)
T cd05571          81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKT  154 (323)
T ss_pred             cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Ccccc
Confidence            999998654  368999999999999999999998   899999999999999999999999999987532211 22334


Q ss_pred             cccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHH
Q 035655          509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL  588 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~  588 (670)
                      ..||+.|+|||++.+..++.++|||||||+++||++|+.||.........   .....+      +..+    +......
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~---~~~~~~------~~~~----p~~~~~~  221 (323)
T cd05571         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELILME------EIRF----PRTLSPE  221 (323)
T ss_pred             eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHH---HHHHcC------CCCC----CCCCCHH
Confidence            57999999999999999999999999999999999999999764322110   111111      1111    1223356


Q ss_pred             HHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          589 VLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       589 l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      +.+++..||+.||++||     ++.++++|-
T Consensus       222 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~  252 (323)
T cd05571         222 AKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR  252 (323)
T ss_pred             HHHHHHHHccCCHHHcCCCCCCCHHHHHcCC
Confidence            77899999999999999     899998763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=2.1e-36  Score=310.73  Aligned_cols=239  Identities=28%  Similarity=0.476  Sum_probs=193.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++|++.++||+|+||.||++....              ..+.|.+|+.++++++|+|++++++++.+ ...+++|||+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~   84 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMSK   84 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecCC
Confidence            467888999999999999997543              24678899999999999999999998854 568999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|.+++.+.....+++.+++.++.|++.||+|||+   .+++||||||+||++++++.+||+|||++............
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05070          85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ  161 (260)
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCccccccc
Confidence            999999977555568999999999999999999998   89999999999999999999999999999876543322222


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...++..|+|||.+.+..++.++||||||++++||++ |+.||......  +....... .     ..+    ..+....
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~-~-----~~~----~~~~~~~  229 (260)
T cd05070         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVER-G-----YRM----PCPQDCP  229 (260)
T ss_pred             CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHc-C-----CCC----CCCCcCC
Confidence            3345678999999988899999999999999999999 89998753221  11111111 0     011    1122234


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+++.+|++++|.+||+++++.+.|+.
T Consensus       230 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         230 ISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            568899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-37  Score=321.21  Aligned_cols=234  Identities=26%  Similarity=0.426  Sum_probs=196.7

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ..|...++||+|.||.||||.+..                 ...+..+|+.+|..++++||.+++|.+..+..++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            346667899999999999998754                 345677899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      |.+|++.+.|...  ..+.+..+.-|+++++.||.|||+   .+.+|||||+.|||+..+|.+||+|||.+.........
T Consensus        93 ~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r  167 (467)
T KOG0201|consen   93 CGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR  167 (467)
T ss_pred             hcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence            9999999999544  345788888899999999999999   89999999999999999999999999999887665433


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      . .+.+||+.|||||++....|+.|+||||||++.+||.+|..|+...+..        ...--+.....|.+.+    .
T Consensus       168 r-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm--------rvlflIpk~~PP~L~~----~  234 (467)
T KOG0201|consen  168 R-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM--------RVLFLIPKSAPPRLDG----D  234 (467)
T ss_pred             c-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc--------eEEEeccCCCCCcccc----c
Confidence            3 6789999999999999889999999999999999999999998753321        0111112223444444    3


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+++..|+++||+.||++.++++|
T Consensus       235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  235 FSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             cCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            44567888999999999999999999985

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.5e-36  Score=315.03  Aligned_cols=241  Identities=24%  Similarity=0.427  Sum_probs=192.2

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      .+++|+..+.||+|+||.||+|....                      ...+|.+|+.++++++||||+++++++.+...
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            46789999999999999999876421                      23458899999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCC--------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEE
Q 035655          418 LLLVYDYIPNGSLDSLLFDNE--------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL  489 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL  489 (670)
                      .++|+||+++|+|.+++.+..        ...+++..++.++.|++.||.|||+   .+++||||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence            999999999999999986532        1246889999999999999999998   89999999999999999999999


Q ss_pred             EeecCceeccCCCcce-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcC
Q 035655          490 GDFGLARLFDHGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLG  567 (670)
Q Consensus       490 ~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~  567 (670)
                      +|||+++......... .....+++.|+|||.+.++.++.++|||||||+++||++ |..||......  ... ......
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~-~~~~~~  237 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVL-RFVMEG  237 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHH-HHHHcC
Confidence            9999987554332211 122345788999999998899999999999999999999 78898753221  111 111111


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...     .    .+......+.+++.+||+.+|++||++.|+++.|+
T Consensus       238 ~~~-----~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         238 GLL-----D----KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CcC-----C----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            111     0    11122356788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.5e-37  Score=327.44  Aligned_cols=235  Identities=25%  Similarity=0.397  Sum_probs=201.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe-eEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD-LLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~-~~lV~  422 (670)
                      ++|...+.+|+|+||.++..+.+.                  ..+...+|+.++++++|||||.+.+.+.+++. ++|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            568888999999999998765433                  34467799999999999999999999998887 99999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      +|++||+|.+.|.+..+..++++++.+++.|++.|+.|||+   ..|+|||||+.||+++.+..|||+|||+|+.+....
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence            99999999999988777789999999999999999999997   999999999999999999999999999999887754


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       .....++||+.||.||.+.+.+|..|+|||||||++|||++-+++|...+.. ++...   .          +......
T Consensus       161 -~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki---~----------~~~~~Pl  226 (426)
T KOG0589|consen  161 -SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKI---N----------RGLYSPL  226 (426)
T ss_pred             -hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHH---h----------hccCCCC
Confidence             2345679999999999999999999999999999999999999999875432 22111   1          1111223


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +......+..++..|++.+|..||++.+++.+
T Consensus       227 p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  227 PSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            34445678889999999999999999999985

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.9e-36  Score=320.93  Aligned_cols=239  Identities=26%  Similarity=0.397  Sum_probs=191.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .+|+..+.||+|+||.||+|.+..                     ..++|.+|+.+++.++||||++++|+|... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            468899999999999999996421                     235688999999999999999999999765 5789


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |+||+++|+|.+++.... ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        86 v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~  161 (316)
T cd05108          86 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  161 (316)
T ss_pred             eeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccC
Confidence            999999999999997653 358999999999999999999998   8999999999999999999999999999987654


Q ss_pred             CCccee-eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          501 GKISHT-TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       501 ~~~~~~-~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ...... ....++..|+|||++.+..++.++|||||||++|||++ |+.||+......  .. .....+..  ...+   
T Consensus       162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--~~-~~~~~~~~--~~~~---  233 (316)
T cd05108         162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--IS-SILEKGER--LPQP---  233 (316)
T ss_pred             CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HH-HHHhCCCC--CCCC---
Confidence            332211 22344678999999999999999999999999999998 999997643221  11 11111110  0011   


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                          ......+.+++..||+.+|.+||++.++++.|...
T Consensus       234 ----~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~  268 (316)
T cd05108         234 ----PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  268 (316)
T ss_pred             ----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                11224577899999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=2.6e-36  Score=315.81  Aligned_cols=241  Identities=27%  Similarity=0.464  Sum_probs=194.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|...+.||+|+||.||++....                     ..+.+.+|++++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            457788999999999999986311                     23568899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc
Q 035655          421 VYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN  486 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~  486 (670)
                      ||||+++++|.+++..+.              ...++|..+++++.||+.||+|||+   ++++||||||+||+++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence            999999999999996532              2348999999999999999999998   89999999999999999999


Q ss_pred             EEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHh
Q 035655          487 ARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQ  564 (670)
Q Consensus       487 ~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~  564 (670)
                      +||+|||++........ .......++..|+|||.+.+..++.++|||||||+++||++ |+.||.......   .....
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~  238 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VIECI  238 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH
Confidence            99999999975543321 11233456789999999998899999999999999999998 999986533211   11111


Q ss_pred             hcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       565 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ..+....         .+...+..+.+++.+||+++|.+||+++++++.|+..
T Consensus       239 ~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~  282 (291)
T cd05094         239 TQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL  282 (291)
T ss_pred             hCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            1111111         1112335678999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2.5e-36  Score=314.37  Aligned_cols=240  Identities=25%  Similarity=0.423  Sum_probs=191.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|+..+.||+|+||.||+|....                     ....|.+|+.++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            457788999999999999987310                     12568899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCC---------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          421 VYDYIPNGSLDSLLFDNE---------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                      ||||+++++|.+++....               ...+++.+++.++.|++.||.|||+   ++++||||||+|||+++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence            999999999999985321               2358899999999999999999998   8999999999999999999


Q ss_pred             cEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHH
Q 035655          486 NARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEF  563 (670)
Q Consensus       486 ~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~  563 (670)
                      .+||+|||+++....... .......++..|+|||++.+..++.++|||||||+++||++ |..||......   .....
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---~~~~~  238 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---EVIEM  238 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH
Confidence            999999999986543321 12233356778999999988889999999999999999998 99998653221   11111


Q ss_pred             hhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       564 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .......     .    .+......+.+++.+||+++|.+||++.+++++|..
T Consensus       239 ~~~~~~~-----~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         239 VRKRQLL-----P----CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHcCCcC-----C----CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            1111111     1    111223567789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=6.2e-36  Score=312.70  Aligned_cols=246  Identities=23%  Similarity=0.311  Sum_probs=188.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|...++||+|+||.||+|....                 ....+.+|++++++++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            568889999999999999997542                 123577999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      ++ |+|.+++.... ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        85 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~  158 (288)
T cd07871          85 LD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-K  158 (288)
T ss_pred             CC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-c
Confidence            97 49999886543 357899999999999999999998   899999999999999999999999999997654322 1


Q ss_pred             eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHh------------hcCCcc
Q 035655          505 HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQ------------HLGQVL  570 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~------------~~~~~~  570 (670)
                      ......+++.|+|||++.+ ..++.++||||+||+++||++|+.||...... .........            ......
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07871         159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR  238 (288)
T ss_pred             cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence            2233468999999998865 56899999999999999999999999763321 111111100            000001


Q ss_pred             cccCCCCCCc----ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 DVVDPNLGSS----YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ~~~d~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.....    ........+.+++..|++.||.+|||++|+++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            1111111100    001123457789999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=3.7e-36  Score=309.73  Aligned_cols=240  Identities=28%  Similarity=0.451  Sum_probs=194.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      ..+|...++||+|+||.||+|....              ..+.|.+|++++++++||||+++++.+.+ ...++||||++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~   83 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS   83 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence            3568889999999999999997643              23578899999999999999999998754 56899999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +|+|.+++.+.....+++..+..++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++..........
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~  160 (262)
T cd05071          84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR  160 (262)
T ss_pred             CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccccccc
Confidence            9999999976555568999999999999999999998   8999999999999999999999999999987655433222


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....++..|+|||+..+..++.++|||||||+++||++ |+.||........   .......     ...    ......
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~---~~~~~~~-----~~~----~~~~~~  228 (262)
T cd05071         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LDQVERG-----YRM----PCPPEC  228 (262)
T ss_pred             cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH---HHHHhcC-----CCC----CCcccc
Confidence            33456778999999988899999999999999999999 8888875322111   1111100     001    112234


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+.+.+++.+|++++|.+||++.++++.|+.
T Consensus       229 ~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         229 PESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            4667899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=3.3e-36  Score=322.51  Aligned_cols=233  Identities=24%  Similarity=0.295  Sum_probs=191.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+|....                    ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3568899999999999999996432                    12356789999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++....  .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       109 v~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~  183 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT  183 (340)
T ss_pred             EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence            999999999999996543  58999999999999999999998   8999999999999999999999999999986543


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .    .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........   .....+..      .+   
T Consensus       184 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~---~~i~~~~~------~~---  247 (340)
T PTZ00426        184 R----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIY---QKILEGII------YF---  247 (340)
T ss_pred             C----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHH---HHHhcCCC------CC---
Confidence            2    23457999999999999888999999999999999999999999864322111   11111110      11   


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhc
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYLN  615 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~  615 (670)
                       +......+.+++..|++.||.+|+     +++++++|-.
T Consensus       248 -p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~  286 (340)
T PTZ00426        248 -PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW  286 (340)
T ss_pred             -CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence             111224567889999999999995     8999988743

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=2.9e-36  Score=315.17  Aligned_cols=240  Identities=26%  Similarity=0.403  Sum_probs=191.7

Q ss_pred             CccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      +|+..+.||+|+||.||+|....                      ..+++.+|+.++++++||||+++++.|...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            46778999999999999986421                      13468899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCC----------------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCc
Q 035655          421 VYDYIPNGSLDSLLFDNE----------------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN  478 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~N  478 (670)
                      ++||+++|+|.+++....                      ...+++..++.++.|++.||.|||+   .+++||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence            999999999999985421                      2358899999999999999999998   899999999999


Q ss_pred             EEecCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchh
Q 035655          479 VLIDADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFIL  556 (670)
Q Consensus       479 ILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~  556 (670)
                      ||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||++++||++ |+.||.......
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999999999976533221 11223356778999999988889999999999999999999 999997533211


Q ss_pred             HHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          557 VDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       557 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                         .+.......     ..    ..+......+.+++..||+++|.+||+++++++.|++.
T Consensus       238 ---~~~~~~~~~-----~~----~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         238 ---LFNLLKTGY-----RM----ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             ---HHHHHhCCC-----CC----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence               111111110     01    11122235678899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=4.3e-36  Score=306.90  Aligned_cols=235  Identities=30%  Similarity=0.413  Sum_probs=194.2

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|...+.||+|++|.||++....                  ..+++.+|++++++++||||+++++++.+.+..++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            47778999999999999997632                  345788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.......+++.++..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||+++....... 
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~-  156 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN-  156 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence            999999999987655679999999999999999999998   8999999999999999999999999999987654322 


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ......|++.|+|||+..+..++.++|||||||+++||++|+.||......  ... .....+.     .+.    ....
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~-~~~~~~~-----~~~----~~~~  224 (256)
T cd08529         157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--ALI-LKIIRGV-----FPP----VSQM  224 (256)
T ss_pred             hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHH-HHHHcCC-----CCC----Cccc
Confidence            223346889999999999989999999999999999999999999764321  111 1111111     111    1112


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+++.+||+.+|++||++.+++++
T Consensus       225 ~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         225 YSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             cCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            34568889999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=3.3e-36  Score=328.89  Aligned_cols=243  Identities=23%  Similarity=0.363  Sum_probs=193.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~  417 (670)
                      .++|.+.++||+|+||.||+|+...                      ..+.|.+|+++|+++. ||||++++++|.+.+.
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            5678889999999999999986411                      1356889999999996 9999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCC-----------------------------------------------------------
Q 035655          418 LLLVYDYIPNGSLDSLLFDNE-----------------------------------------------------------  438 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~-----------------------------------------------------------  438 (670)
                      .++||||+++|+|.++|.++.                                                           
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            999999999999999886431                                                           


Q ss_pred             -----------------------------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC
Q 035655          439 -----------------------------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA  483 (670)
Q Consensus       439 -----------------------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~  483 (670)
                                                         ...+++.++++++.|+++||.|||+   .+++||||||+|||++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~  272 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeC
Confidence                                               1247889999999999999999998   89999999999999999


Q ss_pred             CCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHH
Q 035655          484 DMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVL  561 (670)
Q Consensus       484 ~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~  561 (670)
                      ++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||+++||++ |..||........  ..
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~--~~  350 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST--FY  350 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--HH
Confidence            999999999999865433221 1223456788999999998899999999999999999997 9999875321110  11


Q ss_pred             HHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          562 EFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       562 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .....+.     .+    ..+......+.+++.+||+.+|++||++.++.+.|+..
T Consensus       351 ~~~~~~~-----~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         351 NKIKSGY-----RM----AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             HHHhcCC-----CC----CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence            1111110     01    11122345678899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2.9e-36  Score=313.03  Aligned_cols=241  Identities=24%  Similarity=0.375  Sum_probs=192.1

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      .+++|...+.||+|++|.||+|....                      ....|.+|+.++++++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            35678999999999999999987643                      12468899999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCCc-----cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC---cEEE
Q 035655          418 LLLVYDYIPNGSLDSLLFDNEN-----FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM---NARL  489 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~---~~kL  489 (670)
                      .++||||+++++|.+++.....     ..++|.++++++.||+.||+|||+   .+++||||||+||+++.++   .+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence            9999999999999999865431     358999999999999999999998   8999999999999998765   5999


Q ss_pred             EeecCceeccCCCcce-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcC
Q 035655          490 GDFGLARLFDHGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLG  567 (670)
Q Consensus       490 ~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~  567 (670)
                      +|||+++......... ......+..|+|||++.+..++.++|||||||+++||++ |+.||.......  .........
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~  238 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VMEFVTGGG  238 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHcCC
Confidence            9999998663322111 112234568999999998999999999999999999997 999997533211  111111111


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .          ...+......+.+++.+|++.+|++||++.+|+++|+
T Consensus       239 ~----------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         239 R----------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             c----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            1          1112223356788999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=6e-36  Score=307.55  Aligned_cols=239  Identities=27%  Similarity=0.464  Sum_probs=193.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++|...+.||+|++|.||++....              ..+.|.+|++++++++|||++++++++.. +..++||||+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~   84 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGK   84 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCCC
Confidence            457888999999999999987533              23568899999999999999999998754 568999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|.+++.......+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++...........
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05069          85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ  161 (260)
T ss_pred             CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccC
Confidence            999999977655568999999999999999999998   89999999999999999999999999999876543322222


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...++..|+|||...+..++.++||||||++++||++ |+.||......  +....... .     ..+    ..+....
T Consensus       162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~-~-----~~~----~~~~~~~  229 (260)
T cd05069         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVER-G-----YRM----PCPQGCP  229 (260)
T ss_pred             CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc-C-----CCC----CCCcccC
Confidence            3356778999999988899999999999999999999 89998753221  11111111 0     001    1112234


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+++.+||+++|.+||+++++++.|+.
T Consensus       230 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         230 ESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            668889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3.7e-36  Score=336.52  Aligned_cols=236  Identities=22%  Similarity=0.305  Sum_probs=191.4

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .|...+.||+|++|.||++....                 ....+.+|+.+|++++||||++++++|...+..++||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            48889999999999999986432                 1245678999999999999999999999999999999999


Q ss_pred             CCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          426 PNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       426 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      ++|+|.++|...  ....+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            999999988643  23468899999999999999999998   8999999999999999999999999999987654322


Q ss_pred             -ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          504 -SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       504 -~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       .......||+.|+|||++.+..++.++|||||||+++||++|+.||......  +..... ..+..    ++     .+
T Consensus       225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~--~~~~~~-~~~~~----~~-----~~  292 (478)
T PTZ00267        225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR--EIMQQV-LYGKY----DP-----FP  292 (478)
T ss_pred             cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH-HhCCC----CC-----CC
Confidence             1234457999999999999999999999999999999999999999753321  111111 11111    11     11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ......+.+++..||+.+|.+||++++++++
T Consensus       293 ~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        293 CPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             ccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            1223467889999999999999999999764

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=9.9e-36  Score=313.36  Aligned_cols=249  Identities=23%  Similarity=0.281  Sum_probs=188.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..++||+|+||.||+|....                 ....+.+|+.++++++||||+++++++......++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            4679999999999999999997642                 12356789999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |++ ++|.+++.... ..+++..+..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...... 
T Consensus        84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-  157 (303)
T cd07869          84 YVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-  157 (303)
T ss_pred             CCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence            995 68888876543 358899999999999999999999   899999999999999999999999999997543322 


Q ss_pred             ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcc----------cc
Q 035655          504 SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVL----------DV  572 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~----------~~  572 (670)
                      .......+|+.|+|||++.+ ..++.++|||||||+++||++|+.||.................+...          ..
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (303)
T cd07869         158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH  237 (303)
T ss_pred             ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence            12234568999999998765 45788999999999999999999999763221111110000000000          00


Q ss_pred             cCCC-CC--Cccc-H------HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          573 VDPN-LG--SSYV-V------AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       573 ~d~~-l~--~~~~-~------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .++. ..  .... .      .....+.+++..|++.||++|||++|+++|-.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~  290 (303)
T cd07869         238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEY  290 (303)
T ss_pred             cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcc
Confidence            0000 00  0000 0      01245678999999999999999999998644

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=4.1e-36  Score=320.56  Aligned_cols=238  Identities=25%  Similarity=0.301  Sum_probs=189.1

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCee
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~  418 (670)
                      +|+..+.||+|+||.||++....                       ..+.+..|++++++++ ||||+++++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            47889999999999999876421                       1234678999999995 89999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++||||+++|+|.+++..+  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~  155 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence            9999999999999999654  358999999999999999999998   89999999999999999999999999999865


Q ss_pred             cCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhcCCcccccCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ............||+.|+|||++.+. .++.++|||||||+++||++|+.||..... ...........      ..++.
T Consensus       156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~------~~~~~  229 (332)
T cd05614         156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL------KCDPP  229 (332)
T ss_pred             cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh------cCCCC
Confidence            44333334456799999999998765 478899999999999999999999964221 11111111110      11222


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhc
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYLN  615 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~  615 (670)
                      +..    .....+.+++.+||+.||++||     ++++++++-+
T Consensus       230 ~~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~  269 (332)
T cd05614         230 FPS----FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF  269 (332)
T ss_pred             CCC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence            222    2234567889999999999999     7889988754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-35  Score=310.62  Aligned_cols=237  Identities=24%  Similarity=0.322  Sum_probs=192.0

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      +|+..++||+|+||.||++....                   ....+.+|+.++++++||||+++++++..++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            47788999999999999987532                   11346789999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++|+|.+++.......+++..+..++.|++.||.|||+   .+++||||||+||++++++.++|+|||++....... 
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-  156 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-  156 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence            9999999998876555569999999999999999999999   899999999999999999999999999998754332 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-HHHHHHhhcCCcccccCCCCCCccc
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-DWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       ......|+..|+|||++.+..++.++||||+||++|||++|+.||........ .........          ....++
T Consensus       157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~----------~~~~~~  225 (285)
T cd05605         157 -TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE----------DQEEYS  225 (285)
T ss_pred             -ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh----------cccccC
Confidence             12234789999999999988999999999999999999999999976332111 111110000          001122


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          583 VAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      ......+.+++..||+.||.+||     ++++++++-
T Consensus       226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~  262 (285)
T cd05605         226 EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHP  262 (285)
T ss_pred             cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCc
Confidence            23345678899999999999999     888988763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=7.5e-36  Score=290.28  Aligned_cols=257  Identities=26%  Similarity=0.342  Sum_probs=200.0

Q ss_pred             cCccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|...++||+|.||.||+|++..+                  .....+||+.|+.++|+||+.|+++|-+.+.+-||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4577788999999999999987541                  2346699999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      ||+ .+|+..++++. ..++..++..++.++++||+|||+   +.|+||||||.|+|++++|.+||+|||+|+.+.....
T Consensus        82 fm~-tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~  156 (318)
T KOG0659|consen   82 FMP-TDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR  156 (318)
T ss_pred             ecc-ccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence            996 49999997765 479999999999999999999999   8999999999999999999999999999998876543


Q ss_pred             ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC----
Q 035655          504 SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG----  578 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~----  578 (670)
                      .. +..+-|..|.|||.+.+. .|....||||.|||+.||+-|..-|.++. .+.+...-+...+...+..-|.+.    
T Consensus       157 ~~-~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s-DidQL~~If~~LGTP~~~~WP~~~~lpd  234 (318)
T KOG0659|consen  157 IQ-THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS-DIDQLSKIFRALGTPTPDQWPEMTSLPD  234 (318)
T ss_pred             cc-ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc-hHHHHHHHHHHcCCCCcccCcccccccc
Confidence            33 333789999999988875 68999999999999999999877665522 222222222222221111111111    


Q ss_pred             ------------CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC-CCCCCCCC
Q 035655          579 ------------SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD-ELLPIIDN  625 (670)
Q Consensus       579 ------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~-~~~p~~~~  625 (670)
                                  ...-.......++++..++..||.+|+++.|++++=.-. .|.|..+.
T Consensus       235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~  294 (318)
T KOG0659|consen  235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPS  294 (318)
T ss_pred             HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChh
Confidence                        112223345679999999999999999999999875432 45555443

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=6.1e-36  Score=307.30  Aligned_cols=240  Identities=28%  Similarity=0.467  Sum_probs=195.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..++||+|+||.||++....              ...+|.+|+.++++++|+||+++++++. .+..++++||++
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME   83 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence            3568889999999999999997643              2467899999999999999999999874 457899999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.......+++.+++.++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++...........
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05067          84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence            9999999977666679999999999999999999998   8999999999999999999999999999987654332223


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....++..|+|||++....++.++||||||++++||++ |+.||......  +....... ..     ...    .+...
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~-~~-----~~~----~~~~~  228 (260)
T cd05067         161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLER-GY-----RMP----RPDNC  228 (260)
T ss_pred             cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHc-CC-----CCC----CCCCC
Confidence            33456788999999998889999999999999999999 99999753211  11111111 10     001    11122


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+.+++.+|++.+|++||+++++++.|+.
T Consensus       229 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         229 PEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            3568889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=9e-36  Score=320.82  Aligned_cols=234  Identities=24%  Similarity=0.424  Sum_probs=182.8

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      +|+..++||+|+||.||+++...                 ..+.+.+|++++++++|+||+++++++.+.+.+++||||+
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            34557889999999999997642                 1356889999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++|+|.+..      ...+..+..++.||+.||.|||+   .+|+||||||+|||+++++.+||+|||+++...... ..
T Consensus       155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~  224 (353)
T PLN00034        155 DGGSLEGTH------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-DP  224 (353)
T ss_pred             CCCcccccc------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-cc
Confidence            999997643      35677888999999999999998   899999999999999999999999999998764432 12


Q ss_pred             eeccccCcCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          506 TTNVVGTIGYIAPELART-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .....||..|+|||++..     ...+.++|||||||++|||++|+.||......  +|.........   ...+    .
T Consensus       225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~---~~~~----~  295 (353)
T PLN00034        225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMCAICM---SQPP----E  295 (353)
T ss_pred             ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhc---cCCC----C
Confidence            234579999999998753     23356899999999999999999999742211  12111110000   0011    1


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ........+.+++..||+.||.+||++.|+++|-.
T Consensus       296 ~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~  330 (353)
T PLN00034        296 APATASREFRHFISCCLQREPAKRWSAMQLLQHPF  330 (353)
T ss_pred             CCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence            11223356788999999999999999999999744

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=3.9e-36  Score=311.86  Aligned_cols=239  Identities=25%  Similarity=0.441  Sum_probs=193.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|...+.||+|+||.||+|....                      ..+.|.+|+++|++++||||+++++++......
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            3467888999999999999986521                      235788999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCC------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc
Q 035655          419 LLVYDYIPNGSLDSLLFDNE------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN  486 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~  486 (670)
                      ++||||+++++|.+++....            ...+++.++..++.|++.||.|||+   ++++||||||+||+++.++.
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~  160 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLV  160 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCe
Confidence            99999999999999996532            2458899999999999999999998   89999999999999999999


Q ss_pred             EEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcc-hhHHHHHHH
Q 035655          487 ARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHF-ILVDWVLEF  563 (670)
Q Consensus       487 ~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~-~~~~~~~~~  563 (670)
                      +||+|||+++....... .......+++.|+|||++.+..++.++|||||||+++||++ |+.||..... ...+..   
T Consensus       161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~---  237 (280)
T cd05049         161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECI---  237 (280)
T ss_pred             EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---
Confidence            99999999976533221 11223356788999999999999999999999999999998 9999865322 112111   


Q ss_pred             hhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       564 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                       ..+...         ..+......+.+++..||+.||.+||++.|+++.|+
T Consensus       238 -~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         238 -TQGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             -HcCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence             111111         111123356789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=4.3e-36  Score=312.30  Aligned_cols=239  Identities=25%  Similarity=0.395  Sum_probs=190.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|+..+.||+|+||.||+|.+..                     ..+++..|+..+++++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence            467778999999999999987521                     12456778889999999999999998864 55788


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ++||+++|+|.+++.... ..++|..++.++.||+.||.|||+   ++++||||||+|||+++++.+||+|||+++....
T Consensus        86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~  161 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYP  161 (279)
T ss_pred             EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence            999999999999997643 368999999999999999999998   8999999999999999999999999999986643


Q ss_pred             CCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          501 GKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       501 ~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .... ......++..|+|||.+.++.++.++|||||||++||+++ |+.||...........   ...+..  ...+.. 
T Consensus       162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~---~~~~~~--~~~~~~-  235 (279)
T cd05111         162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL---LEKGER--LAQPQI-  235 (279)
T ss_pred             CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---HHCCCc--CCCCCC-
Confidence            3221 2233467789999999998899999999999999999998 9999976432211111   111111  111111 


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                            ....+.+++..||+.+|.+||++.|+++.|...
T Consensus       236 ------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~  268 (279)
T cd05111         236 ------CTIDVYMVMVKCWMIDENVRPTFKELANEFTRM  268 (279)
T ss_pred             ------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence                  124567788999999999999999999988764

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=5.3e-36  Score=318.66  Aligned_cols=228  Identities=22%  Similarity=0.266  Sum_probs=184.2

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      +.||+|+||.||++....                   ....+.+|++++++++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            469999999999987543                   1235668999999999999999999999999999999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeec
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      +|..++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~  154 (323)
T cd05595          81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKT  154 (323)
T ss_pred             cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccccc
Confidence            999988654  358999999999999999999998   899999999999999999999999999987532221 12234


Q ss_pred             cccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHH
Q 035655          509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL  588 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~  588 (670)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||........  ... .....      ..+    +......
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~--~~~-~~~~~------~~~----p~~~~~~  221 (323)
T cd05595         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL--FEL-ILMEE------IRF----PRTLSPE  221 (323)
T ss_pred             ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH--HHH-HhcCC------CCC----CCCCCHH
Confidence            5799999999999999999999999999999999999999975332111  000 00010      111    1122355


Q ss_pred             HHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          589 VLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       589 l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      +.+++..||+.||.+||     ++.+++++-
T Consensus       222 ~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~  252 (323)
T cd05595         222 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  252 (323)
T ss_pred             HHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence            67899999999999998     899998764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-36  Score=322.92  Aligned_cols=239  Identities=28%  Similarity=0.346  Sum_probs=192.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|...+.||+|+||.||++....                   ....+.+|++++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            468899999999999999998652                   2345778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++.+.  ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus        81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~  155 (350)
T cd05573          81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK  155 (350)
T ss_pred             cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence            999999999999765  468999999999999999999999   999999999999999999999999999998654432


Q ss_pred             ----------------------------cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Q 035655          503 ----------------------------ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF  554 (670)
Q Consensus       503 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~  554 (670)
                                                  ........||+.|+|||++.+..++.++|||||||+++||++|+.||.....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~  235 (350)
T cd05573         156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL  235 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence                                        1122345799999999999999999999999999999999999999976442


Q ss_pred             hhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHHhc
Q 035655          555 ILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT-MRQVLRYLN  615 (670)
Q Consensus       555 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~  615 (670)
                      ..  ...........  ...|.. .    .....+.+++..|++ +|.+||+ +++++++..
T Consensus       236 ~~--~~~~i~~~~~~--~~~p~~-~----~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~  287 (350)
T cd05573         236 QE--TYNKIINWKES--LRFPPD-P----PVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF  287 (350)
T ss_pred             HH--HHHHHhccCCc--ccCCCC-C----CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence            11  11111110000  001110 0    123557788889997 9999999 999999753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=4.6e-36  Score=314.97  Aligned_cols=239  Identities=28%  Similarity=0.438  Sum_probs=189.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ++|+..+.||+|+||.||+|....                   ..+.|.+|+++++++ +||||+++++++...+..++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            468889999999999999986532                   124678899999999 799999999999999999999


Q ss_pred             EeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcE
Q 035655          422 YDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA  487 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~  487 (670)
                      +||+++++|.+++.+..              ...+++..++.++.|++.||+|||+   .+++||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence            99999999999996532              1358899999999999999999998   899999999999999999999


Q ss_pred             EEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhc
Q 035655          488 RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL  566 (670)
Q Consensus       488 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~  566 (670)
                      ||+|||++......  ........+..|+|||++.+..++.++|||||||+++||++ |+.||......  +..... ..
T Consensus       159 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~--~~~~~~-~~  233 (297)
T cd05089         159 KIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA--ELYEKL-PQ  233 (297)
T ss_pred             EECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH-hc
Confidence            99999998643221  11111233567999999988889999999999999999997 99999764321  111111 11


Q ss_pred             CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       567 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      +     ..+.    .+......+.+++..||+.+|.+||+++++++.|+..
T Consensus       234 ~-----~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  275 (297)
T cd05089         234 G-----YRME----KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM  275 (297)
T ss_pred             C-----CCCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            0     0111    1112235678899999999999999999999988643

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-36  Score=316.33  Aligned_cols=225  Identities=24%  Similarity=0.260  Sum_probs=182.6

Q ss_pred             EeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          370 IGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ||+|+||.||++....                   ....+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            6999999999997643                   124567899999999999999999999999999999999999999


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccc
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV  510 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~  510 (670)
                      .+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... .......
T Consensus        81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~  154 (312)
T cd05585          81 FHHLQRE--GRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFC  154 (312)
T ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccccc
Confidence            9999654  358999999999999999999998   899999999999999999999999999997543222 2234457


Q ss_pred             cCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHH
Q 035655          511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL  590 (670)
Q Consensus       511 gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~  590 (670)
                      ||+.|+|||++.+..++.++|||||||+++||++|+.||......  ....... ...      ..    ++......+.
T Consensus       155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~--~~~~~~~-~~~------~~----~~~~~~~~~~  221 (312)
T cd05585         155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN--EMYRKIL-QEP------LR----FPDGFDRDAK  221 (312)
T ss_pred             CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH--HHHHHHH-cCC------CC----CCCcCCHHHH
Confidence            999999999999999999999999999999999999999764321  1111111 110      11    1112234567


Q ss_pred             HHHHhhccCCCCCCCC---HHHHHHH
Q 035655          591 QLGLLCSHQKAEARPT---MRQVLRY  613 (670)
Q Consensus       591 ~l~~~Cl~~dP~~RPs---~~evl~~  613 (670)
                      +++..||+.||.+||+   +.|+++|
T Consensus       222 ~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         222 DLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             HHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence            8899999999999975   6777765

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=3e-36  Score=315.13  Aligned_cols=242  Identities=27%  Similarity=0.421  Sum_probs=194.0

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccC
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKR  416 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~  416 (670)
                      ..++|+..+.||+|+||.||++....                      ....+.+|+++++++ +|+||++++++|..++
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            34578889999999999999986421                      124578899999999 7999999999999999


Q ss_pred             eeEEEEeccCCCCchhhcccC--------------CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec
Q 035655          417 DLLLVYDYIPNGSLDSLLFDN--------------ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID  482 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld  482 (670)
                      ..+++|||+++|+|.+++...              ....+++..+++++.|++.||.|||+   .+|+||||||+||+++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~  166 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVT  166 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEc
Confidence            999999999999999998642              23468999999999999999999998   8999999999999999


Q ss_pred             CCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHH
Q 035655          483 ADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWV  560 (670)
Q Consensus       483 ~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~  560 (670)
                      .++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||........   
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---  243 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL---  243 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH---
Confidence            9999999999999866543221 1222345678999999988899999999999999999998 9999875332111   


Q ss_pred             HHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       561 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......+.         ....+......+.+++.+||+.+|.+|||++|+++.|+.
T Consensus       244 ~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~  290 (293)
T cd05053         244 FKLLKEGY---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR  290 (293)
T ss_pred             HHHHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence            11111111         011122234568899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2e-35  Score=304.28  Aligned_cols=243  Identities=23%  Similarity=0.381  Sum_probs=197.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||+|+...                   ....+.+|++++++++||||+++++++...+..++|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            478889999999999999997532                   1246789999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          423 DYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       423 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||+++|+|.+++...  ....+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            999999999988542  23458899999999999999999998   8999999999999999999999999999987654


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      ... ......|++.|+|||.+.+..++.++||||||++++||++|+.||.........+........      .+..   
T Consensus       159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~---  228 (267)
T cd08228         159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD------YPPL---  228 (267)
T ss_pred             hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC------CCCC---
Confidence            321 122346888999999998888999999999999999999999999764433333222211111      1111   


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ........+.+++.+||+.+|.+||++.+|++.|++.
T Consensus       229 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         229 PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            1123346688899999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=5.6e-36  Score=312.76  Aligned_cols=241  Identities=27%  Similarity=0.447  Sum_probs=193.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|.+.+.||+|+||+||++....                     ..+.+.+|++++++++||||++++++|...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            568889999999999999986311                     23468899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCC-----------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEE
Q 035655          421 VYDYIPNGSLDSLLFDNE-----------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL  489 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL  489 (670)
                      |+||+++++|.+++....           ...+++.+++.++.|++.||+|||+   .+++||||||+||++++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence            999999999999986432           2358999999999999999999998   89999999999999999999999


Q ss_pred             EeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcC
Q 035655          490 GDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLG  567 (670)
Q Consensus       490 ~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~  567 (670)
                      +|||+++....... .......++..|+|||.+.+..++.++|||||||+++||++ |+.||.......   .......+
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~~~i~~~  238 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIECITQG  238 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcC
Confidence            99999976543221 11223345778999999998889999999999999999998 999987533211   11111111


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...     .....    ....+.+++.+||+++|.+||+++++++.|+..
T Consensus       239 ~~~-----~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~  279 (288)
T cd05093         239 RVL-----QRPRT----CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL  279 (288)
T ss_pred             CcC-----CCCCC----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            111     11111    224578999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.6e-36  Score=324.40  Aligned_cols=232  Identities=25%  Similarity=0.354  Sum_probs=194.0

Q ss_pred             ccccceEeeeCceeEEEeeccch-------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      |+.++.||+|+-|.|-+|+...+                   .....+||-+|+.+.|||+++++++++++.++|+|.||
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy   93 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY   93 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence            56678999999999998876441                   23456899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++|-|.++|..++  ++++.+..+++.||+.|+.|+|.   .+|+|||+||+|+|||.++++||+|||+|.+...+.  
T Consensus        94 v~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk--  166 (786)
T KOG0588|consen   94 VPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK--  166 (786)
T ss_pred             cCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCCc--
Confidence            99999999997654  69999999999999999999999   899999999999999999999999999998766554  


Q ss_pred             eeeccccCcCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          505 HTTNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t-~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      ...+.+|.++|.|||++.+.+|. .++||||.|||||.|++|+.||+++...  .. ....+.|..          +++.
T Consensus       167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir--~L-LlKV~~G~f----------~MPs  233 (786)
T KOG0588|consen  167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR--VL-LLKVQRGVF----------EMPS  233 (786)
T ss_pred             cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH--HH-HHHHHcCcc----------cCCC
Confidence            33456999999999999999985 7999999999999999999999965432  11 111122211          1122


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ....++.+|+.+|+..||.+|.|++||++|-.
T Consensus       234 ~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~  265 (786)
T KOG0588|consen  234 NISSEAQDLLRRMLDVDPSTRITTEEILKHPF  265 (786)
T ss_pred             cCCHHHHHHHHHHhccCccccccHHHHhhCch
Confidence            23345678888999999999999999999853

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-36  Score=310.50  Aligned_cols=243  Identities=26%  Similarity=0.351  Sum_probs=194.2

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc------------------------------hHHHHHHHHHHHhccccCceeee
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT------------------------------RMREFAAEIESLGRLRHKHLVNL  408 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------------------~~~~f~~Ei~~L~~l~H~nIv~l  408 (670)
                      ...++|...+.||+|.||.|-+++...                              ..+...+||.+|++|+|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            345789999999999999999987532                              12477899999999999999999


Q ss_pred             eeeeecc--CeeEEEEeccCCCCchhhcccCCccc-cCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          409 QGWCKRK--RDLLLVYDYIPNGSLDSLLFDNENFV-LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       409 ~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                      +.+..+.  +.+|||+|||..|.+...-   .... ++..+.++++.++..||.|||.   ++||||||||+|+||+++|
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g  247 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDG  247 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCC
Confidence            9998765  6799999999998886653   2334 9999999999999999999999   9999999999999999999


Q ss_pred             cEEEEeecCceeccCCCc----ceeeccccCcCCCCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCCCcc-hh
Q 035655          486 NARLGDFGLARLFDHGKI----SHTTNVVGTIGYIAPELARTGK----ASCSTDVFAYGVLLLEIATGRRPIDSDHF-IL  556 (670)
Q Consensus       486 ~~kL~DFGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~----~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~  556 (670)
                      .+||+|||.+.....+..    ......+||+.|||||...++.    ...+.||||+||.||.|+.|+.||-.+.. .+
T Consensus       248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l  327 (576)
T KOG0585|consen  248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL  327 (576)
T ss_pred             cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence            999999999987643321    1122358999999999887743    35689999999999999999999975321 11


Q ss_pred             HHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCC
Q 035655          557 VDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDEL  619 (670)
Q Consensus       557 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  619 (670)
                      .+            .++...+.-.-.+++.+.+.+|++.+|++||..|.+..+|..|.+-...
T Consensus       328 ~~------------KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  328 FD------------KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             HH------------HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            11            1222222222223456788899999999999999999999999875443

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.5e-36  Score=306.05  Aligned_cols=241  Identities=29%  Similarity=0.482  Sum_probs=196.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|.+.++||+|+||.||++....              ..+++.+|+.++++++|+||+++++++......++|+||++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   84 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS   84 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence            4678899999999999999987543              24678999999999999999999999999899999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.+.....+++.++..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||++...........
T Consensus        85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  161 (261)
T cd05034          85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR  161 (261)
T ss_pred             CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence            9999999987665679999999999999999999998   8999999999999999999999999999987654322222


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....++..|+|||.+.+..++.++||||||++++|+++ |+.||......  ........  ..    ...    .+...
T Consensus       162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~--~~----~~~----~~~~~  229 (261)
T cd05034         162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVER--GY----RMP----RPPNC  229 (261)
T ss_pred             hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc--CC----CCC----CCCCC
Confidence            23345678999999998889999999999999999999 99999653211  11111110  00    001    11112


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+.+++.+|++.+|.+||+++++.+.|+.
T Consensus       230 ~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         230 PEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            3568899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=7.3e-36  Score=318.33  Aligned_cols=228  Identities=23%  Similarity=0.271  Sum_probs=185.2

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      +.||+|+||.||++....                   ....+.+|+.++++++||||+++.+++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999987533                   2345778999999999999999999999999999999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeec
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      +|.+++...  ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~  154 (328)
T cd05593          81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMKT  154 (328)
T ss_pred             CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-ccccc
Confidence            999988654  358999999999999999999998   899999999999999999999999999987533221 22234


Q ss_pred             cccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHH
Q 035655          509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL  588 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~  588 (670)
                      ..||+.|+|||++.+..++.++|||||||+++||++|+.||.......  .... ....      +..+    +......
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~--~~~~-~~~~------~~~~----p~~~~~~  221 (328)
T cd05593         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFEL-ILME------DIKF----PRTLSAD  221 (328)
T ss_pred             ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH--HHHH-hccC------CccC----CCCCCHH
Confidence            579999999999998899999999999999999999999997533211  1100 0000      1111    1122345


Q ss_pred             HHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          589 VLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       589 l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      +.+++..||+.||.+||     ++.|++++-
T Consensus       222 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  252 (328)
T cd05593         222 AKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS  252 (328)
T ss_pred             HHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence            77888999999999997     899999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.2e-35  Score=317.19  Aligned_cols=246  Identities=25%  Similarity=0.361  Sum_probs=184.9

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----CeeE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----RDLL  419 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~~~  419 (670)
                      +|+..++||+|+||.||+|+...                  ....+.+|++++++++||||+++++++...     ...+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            47888999999999999997643                  124577899999999999999999988543     3589


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||||+. ++|.+++...  ..+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        81 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~  154 (338)
T cd07859          81 VVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAF  154 (338)
T ss_pred             EEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence            9999995 6899988654  358999999999999999999999   899999999999999999999999999998543


Q ss_pred             CCCc--ceeeccccCcCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhh---------
Q 035655          500 HGKI--SHTTNVVGTIGYIAPELART--GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQH---------  565 (670)
Q Consensus       500 ~~~~--~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~---------  565 (670)
                      ....  .......||+.|+|||++.+  ..++.++|||||||+++||++|+.||...... ..........         
T Consensus       155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (338)
T cd07859         155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR  234 (338)
T ss_pred             cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            3221  11234579999999999865  67899999999999999999999999753321 1111100000         


Q ss_pred             -----cCCcccccCCCCCCccc---HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          566 -----LGQVLDVVDPNLGSSYV---VAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       566 -----~~~~~~~~d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                           .......+.+.....+.   ......+.+++..||+.||++||+++|++++-
T Consensus       235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp  291 (338)
T cd07859         235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP  291 (338)
T ss_pred             hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence                 00000001110000000   11234567899999999999999999999863

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=4.1e-36  Score=320.27  Aligned_cols=239  Identities=26%  Similarity=0.293  Sum_probs=191.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                   ..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            478899999999999999987643                   2245778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++.+.. ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus        81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~  156 (330)
T cd05601          81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK  156 (330)
T ss_pred             CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence            9999999999997653 368999999999999999999999   899999999999999999999999999998765544


Q ss_pred             cceeeccccCcCCCCccccc------cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          503 ISHTTNVVGTIGYIAPELAR------TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~------~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ........||+.|+|||++.      ...++.++|||||||++|||++|+.||.......  ...............+  
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~~~~i~~~~~~~~~~~--  232 (330)
T cd05601         157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK--TYNNIMNFQRFLKFPE--  232 (330)
T ss_pred             ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH--HHHHHHcCCCccCCCC--
Confidence            33334457999999999886      4567899999999999999999999997643211  1111111111111100  


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                           .......+.+++..|++ +|.+||+++++++|-
T Consensus       233 -----~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~  264 (330)
T cd05601         233 -----DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHP  264 (330)
T ss_pred             -----CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence                 01123456778888997 999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=5.5e-36  Score=320.47  Aligned_cols=241  Identities=24%  Similarity=0.387  Sum_probs=189.7

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc-Ce
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK-RD  417 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~-~~  417 (670)
                      ++|++.+.||+|+||.||+|....                      ..+.+..|+.+++++ +|+||++++++|... ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            468889999999999999985311                      124567899999999 899999999988654 56


Q ss_pred             eEEEEeccCCCCchhhcccCC-----------------------------------------------------------
Q 035655          418 LLLVYDYIPNGSLDSLLFDNE-----------------------------------------------------------  438 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~-----------------------------------------------------------  438 (670)
                      .++++||+++++|.+++....                                                           
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            899999999999999985422                                                           


Q ss_pred             ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCC
Q 035655          439 NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIA  517 (670)
Q Consensus       439 ~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~a  517 (670)
                      ...++|..+.+++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++........ ......++..|+|
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  243 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  243 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence            1268999999999999999999998   89999999999999999999999999999865433221 1223456778999


Q ss_pred             ccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhh
Q 035655          518 PELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLC  596 (670)
Q Consensus       518 PE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~C  596 (670)
                      ||++.+..++.++|||||||+++||++ |+.||....... ... .....+...         ..+......+.+++.+|
T Consensus       244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~-~~~~~~~~~---------~~~~~~~~~~~~l~~~c  312 (337)
T cd05054         244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFC-RRLKEGTRM---------RAPEYATPEIYSIMLDC  312 (337)
T ss_pred             cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHH-HHHhccCCC---------CCCccCCHHHHHHHHHH
Confidence            999999999999999999999999998 999997522110 111 111111100         01112235688999999


Q ss_pred             ccCCCCCCCCHHHHHHHhcC
Q 035655          597 SHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       597 l~~dP~~RPs~~evl~~L~~  616 (670)
                      |+.+|.+||++.|++++|+.
T Consensus       313 l~~~p~~RPs~~ell~~l~~  332 (337)
T cd05054         313 WHNNPEDRPTFSELVEILGD  332 (337)
T ss_pred             ccCChhhCcCHHHHHHHHHH
Confidence            99999999999999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=9.7e-36  Score=307.04  Aligned_cols=240  Identities=27%  Similarity=0.499  Sum_probs=193.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      +++|+..+.||+|+||.||+|....                    ..+.+..|++++++++||||+++.+++...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            4578888999999999999997531                    13468899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++++|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++.....
T Consensus        84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063          84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence            999999999999997643 468999999999999999999998   8999999999999999999999999999986654


Q ss_pred             CCcceee--ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          501 GKISHTT--NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       501 ~~~~~~~--~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      .......  ....+..|+|||++.+..++.++|||||||++|||++ |+.||......  +.........     ..+  
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~~~~~i~~~~-----~~~--  230 (268)
T cd05063         160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--EVMKAINDGF-----RLP--  230 (268)
T ss_pred             ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHHHHHhcCC-----CCC--
Confidence            3222111  1223457999999988889999999999999999998 99999653221  1111111110     001  


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                         ........+.+++.+||+.+|.+||++.+|++.|++
T Consensus       231 ---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         231 ---APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK  266 (268)
T ss_pred             ---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence               111223567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.1e-35  Score=304.72  Aligned_cols=236  Identities=30%  Similarity=0.420  Sum_probs=191.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCceeeeeeeee-ccCeeEEEEeccCCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHLVNLQGWCK-RKRDLLLVYDYIPNG  428 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~-~~~~~~lV~E~~~~g  428 (670)
                      ++|+..+.||+|+||.||++....            ..+.|.+|+.++++++|+|++++++++. .++..++|+||++++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~   85 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   85 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCC
Confidence            468888999999999999986532            3457889999999999999999999764 456789999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeec
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      +|.+++.+.....+++..+++++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++......    ..
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----~~  158 (256)
T cd05082          86 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DT  158 (256)
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccC----CC
Confidence            99999977665568999999999999999999998   899999999999999999999999999987543322    22


Q ss_pred             cccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ..++..|+|||++.+..++.++|||||||+++||++ |+.||.....  ......... +.     .+    ........
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~-~~-----~~----~~~~~~~~  226 (256)
T cd05082         159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEK-GY-----KM----DAPDGCPP  226 (256)
T ss_pred             CccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhc-CC-----CC----CCCCCCCH
Confidence            345678999999998889999999999999999998 9999875332  111111111 10     01    11122345


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+.+++.+||+.+|++||++.++++.|+.
T Consensus       227 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         227 VVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            67889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-35  Score=304.61  Aligned_cols=237  Identities=24%  Similarity=0.382  Sum_probs=191.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|+..+.||+|++|.||++....                     ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            578999999999999999996532                     12457789999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |+||+++++|.+++...  ..+++..+.+++.|++.||.|||+   .+++||||||+||++++++++||+|||+++....
T Consensus        82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~  156 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT  156 (263)
T ss_pred             EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence            99999999999998654  358899999999999999999998   8999999999999999999999999999976543


Q ss_pred             CCccee--eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          501 GKISHT--TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       501 ~~~~~~--~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ......  ....++..|+|||.+.+..++.++||||||+++|||++|+.||........  ........         ..
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~---------~~  225 (263)
T cd06625         157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA--IFKIATQP---------TN  225 (263)
T ss_pred             cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH--HHHHhccC---------CC
Confidence            221111  234678899999999998899999999999999999999999975322111  11111100         01


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...+......+.+++..||+.+|.+||++.+++++.
T Consensus       226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~  261 (263)
T cd06625         226 PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF  261 (263)
T ss_pred             CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence            112222335678899999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.1e-36  Score=309.86  Aligned_cols=239  Identities=25%  Similarity=0.422  Sum_probs=193.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|...+.||+|+||.||+|....                      ....+.+|+.++++++||||+++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            4578889999999999999986531                      234678999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCC--------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEE
Q 035655          419 LLVYDYIPNGSLDSLLFDNE--------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLG  490 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~  490 (670)
                      ++|+||+++|+|.+++....        ...++|..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEEC
Confidence            99999999999999986532        2247899999999999999999998   899999999999999999999999


Q ss_pred             eecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcC
Q 035655          491 DFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLG  567 (670)
Q Consensus       491 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~  567 (670)
                      |||+++....... .......++..|+|||.+.++.++.++|||||||+++|+++ |+.||...... ...+.    ..+
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~----~~~  237 (277)
T cd05032         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFV----IDG  237 (277)
T ss_pred             CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHH----hcC
Confidence            9999976544322 12233456789999999988889999999999999999998 99998653221 11111    111


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...     ..    +......+.+++..||+.+|++||++.++++.|+
T Consensus       238 ~~~-----~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         238 GHL-----DL----PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCC-----CC----CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            111     11    1112457889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.1e-35  Score=309.51  Aligned_cols=248  Identities=27%  Similarity=0.415  Sum_probs=189.0

Q ss_pred             ccccceEeeeCceeEEEeecc---------------------chHHHHHHHHHHHhccccCceeeeeeeeecc--CeeEE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLP---------------------TRMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLL  420 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~---------------------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~l  420 (670)
                      |+..+.||+|+||+||++...                     .....|.+|++++++++||||++++++|...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            378899999999999875321                     0235678999999999999999999998654  45899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++++|.+++...   .+++.+++.++.|++.||.|||+   ++++||||||+|||+++++.+||+|||+++....
T Consensus        86 v~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          86 IMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             EecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence            99999999999999643   48999999999999999999998   8999999999999999999999999999986654


Q ss_pred             CCcc--eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHH---HHHhhcCCcccccCC
Q 035655          501 GKIS--HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWV---LEFQHLGQVLDVVDP  575 (670)
Q Consensus       501 ~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~---~~~~~~~~~~~~~d~  575 (670)
                      ....  ......++..|+|||.+.+..++.++||||||++++||++|+.|+........+..   ..........+..+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd05080         160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER  239 (283)
T ss_pred             cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc
Confidence            3211  11223456679999999888899999999999999999999999865321111100   000000111111111


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ......+......+.+++..||+++|++||+++++++.|+..
T Consensus       240 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         240 GMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            111112223346788999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=1.3e-35  Score=321.73  Aligned_cols=241  Identities=23%  Similarity=0.310  Sum_probs=191.6

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ..++|+..++||+|+||.||++....                   ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            45689999999999999999987643                   12346789999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++...   .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++.....
T Consensus       121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~  194 (370)
T cd05596         121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA  194 (370)
T ss_pred             EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence            99999999999998543   47888899999999999999998   8999999999999999999999999999987654


Q ss_pred             CCcceeeccccCcCCCCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTG----KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~----~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ..........||+.|+|||++.+.    .++.++|||||||++|||++|+.||........ + ...........  .|.
T Consensus       195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~-~~i~~~~~~~~--~~~  270 (370)
T cd05596         195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-Y-SKIMDHKNSLT--FPD  270 (370)
T ss_pred             CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH-H-HHHHcCCCcCC--CCC
Confidence            333333456799999999988653    478999999999999999999999986443211 1 11111000000  010


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhc
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEA--RPTMRQVLRYLN  615 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~  615 (670)
                           .......+.+++..|++.+|.+  ||+++++++|-.
T Consensus       271 -----~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~  306 (370)
T cd05596         271 -----DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF  306 (370)
T ss_pred             -----cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence                 1112356778889999999987  999999998753

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=8.2e-36  Score=304.73  Aligned_cols=232  Identities=27%  Similarity=0.412  Sum_probs=184.8

Q ss_pred             ceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          368 EVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      +.||+|+||.||+|....                 ....|.+|++++++++||||++++++|......++|+||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            468999999999987632                 135688999999999999999999999999999999999999999


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee-ecc
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNV  509 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~-~~~  509 (670)
                      .+++.... ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........... ...
T Consensus        81 ~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  156 (252)
T cd05084          81 LTFLRTEG-PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK  156 (252)
T ss_pred             HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence            99996543 358999999999999999999998   8999999999999999999999999999875443221111 111


Q ss_pred             ccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHH
Q 035655          510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL  588 (670)
Q Consensus       510 ~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~  588 (670)
                      ..+..|+|||.+.++.++.++|||||||+++||++ |..||........   .......         .....+......
T Consensus       157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~---~~~~~~~---------~~~~~~~~~~~~  224 (252)
T cd05084         157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT---REAIEQG---------VRLPCPELCPDA  224 (252)
T ss_pred             CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH---HHHHHcC---------CCCCCcccCCHH
Confidence            23457999999999999999999999999999998 8888864322111   1111110         001112223456


Q ss_pred             HHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          589 VLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       589 l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +.+++.+|++.+|.+||++.++++.|+
T Consensus       225 ~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         225 VYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=3.1e-35  Score=305.63  Aligned_cols=232  Identities=28%  Similarity=0.358  Sum_probs=184.3

Q ss_pred             EeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          370 IGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ||+|+||.||++....                   ..+.+..|++++++++||||+++.+++..+...++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            6999999999987643                   122345699999999999999999999999999999999999999


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccc
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV  510 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~  510 (670)
                      .+++.......+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++.......  ......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~  155 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRA  155 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccC
Confidence            999876665679999999999999999999998   899999999999999999999999999998664432  223457


Q ss_pred             cCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHHhhcCCcccccCCCCCCcccHHHHHHH
Q 035655          511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW-VLEFQHLGQVLDVVDPNLGSSYVVAEMELV  589 (670)
Q Consensus       511 gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l  589 (670)
                      |+..|+|||++.+..++.++|||||||++|||++|+.||.......... +........    ..  ..   .......+
T Consensus       156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~--~~---~~~~~~~~  226 (277)
T cd05607         156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDE----VK--FE---HQNFTEES  226 (277)
T ss_pred             CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccc----cc--cc---cccCCHHH
Confidence            8999999999998889999999999999999999999997532211110 000000000    00  00   01123457


Q ss_pred             HHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          590 LQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       590 ~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .+++..||+.||.+||+++|+++.+.
T Consensus       227 ~~li~~~L~~~P~~R~~~~~~~~~~~  252 (277)
T cd05607         227 KDICRLFLAKKPEDRLGSREKNDDPR  252 (277)
T ss_pred             HHHHHHHhccCHhhCCCCccchhhhh
Confidence            88999999999999999977765444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=6.1e-36  Score=315.13  Aligned_cols=239  Identities=30%  Similarity=0.458  Sum_probs=189.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+|.+..                   ..+.+.+|++++.++ +||||+++++++.+++..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            3578888999999999999997532                   224677899999999 89999999999999999999


Q ss_pred             EEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc
Q 035655          421 VYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN  486 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~  486 (670)
                      |+||+++++|.+++.+..              ...+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~  162 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV  162 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCc
Confidence            999999999999996532              2358899999999999999999998   89999999999999999999


Q ss_pred             EEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhh
Q 035655          487 ARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQH  565 (670)
Q Consensus       487 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~  565 (670)
                      +||+|||+++.....  .......++..|+|||++.+..++.++|||||||+++||++ |..||......  +.......
T Consensus       163 ~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~  238 (303)
T cd05088         163 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQ  238 (303)
T ss_pred             EEeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHHHHhc
Confidence            999999998643211  11122234678999999988889999999999999999998 99999753221  11111110


Q ss_pred             cCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       566 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       .     ...    ..+......+.+++.+||+.+|.+||+++++++.|+.
T Consensus       239 -~-----~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~  279 (303)
T cd05088         239 -G-----YRL----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  279 (303)
T ss_pred             -C-----CcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence             0     000    1111123457889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=9.2e-36  Score=309.87  Aligned_cols=239  Identities=25%  Similarity=0.404  Sum_probs=190.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|...++||+|+||.||++....                     ....|.+|++++++++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            467778999999999999985311                     23578899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCc-------------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcE
Q 035655          421 VYDYIPNGSLDSLLFDNEN-------------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA  487 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~  487 (670)
                      ++||+++++|.+++.....             ..+++.+++.++.|++.||+|||+   .+++||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence            9999999999999865421             358999999999999999999998   899999999999999999999


Q ss_pred             EEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhh
Q 035655          488 RLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQH  565 (670)
Q Consensus       488 kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~  565 (670)
                      ||+|||++......... ......+++.|+|||.+.+..++.++|||||||+++||++ |+.||......  +.... ..
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~-~~  238 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--EAIEC-IT  238 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--HHHHH-HH
Confidence            99999999765432211 1122345788999999998899999999999999999998 99998653221  11111 11


Q ss_pred             cCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       566 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .+..     +.    .+......+.+++.+||+.||.+||+++++++.|+
T Consensus       239 ~~~~-----~~----~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         239 QGRE-----LE----RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             cCcc-----CC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            1110     01    11112345778999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.7e-35  Score=309.75  Aligned_cols=247  Identities=25%  Similarity=0.382  Sum_probs=194.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------------------------hHHHHHHHHHHHhccccCceee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------------------------RMREFAAEIESLGRLRHKHLVN  407 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------------------------~~~~f~~Ei~~L~~l~H~nIv~  407 (670)
                      ..+|+..+.||+|+||.||++....                                 ..+.|.+|++++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            3578889999999999999875421                                 2356788999999999999999


Q ss_pred             eeeeeeccCeeEEEEeccCCCCchhhcccCC---------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCc
Q 035655          408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE---------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN  478 (670)
Q Consensus       408 l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~N  478 (670)
                      ++++|..++..++++||+++++|.+++.+..         ...+++..++.++.|++.||+|||+   .+++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhc
Confidence            9999999999999999999999999996643         1268999999999999999999998   899999999999


Q ss_pred             EEecCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCcc-
Q 035655          479 VLIDADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT--GRRPIDSDHF-  554 (670)
Q Consensus       479 ILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t--G~~pf~~~~~-  554 (670)
                      |+++.++.++|+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++  |..||..... 
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ  240 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence            9999999999999999976543321 12233456789999999988889999999999999999998  6778764221 


Q ss_pred             hhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          555 ILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       555 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..............      .......+......+.+++.+||+.||.+||++.|+++.|+.
T Consensus       241 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         241 QVIENAGHFFRDDG------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             HHHHHHHhcccccc------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            11111111111111      000011112233578899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=3.2e-35  Score=311.73  Aligned_cols=227  Identities=24%  Similarity=0.337  Sum_probs=179.7

Q ss_pred             ceEeeeCceeEEEeeccch-------------------HHHHHHHHHHHhc-cccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGR-LRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~-l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||++.....                   .+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999976431                   2234556666665 4899999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++....  .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~  154 (316)
T cd05592          81 GDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAS  154 (316)
T ss_pred             CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cccc
Confidence            99999986543  58999999999999999999999   899999999999999999999999999998643322 2234


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||+++||++|+.||........  ...... .      .+.+    +.....
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~--~~~i~~-~------~~~~----~~~~~~  221 (316)
T cd05592         155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL--FDSILN-D------RPHF----PRWISK  221 (316)
T ss_pred             cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHc-C------CCCC----CCCCCH
Confidence            45799999999999988999999999999999999999999976432111  111110 0      1111    112234


Q ss_pred             HHHHHHHhhccCCCCCCCCHH-HHHHH
Q 035655          588 LVLQLGLLCSHQKAEARPTMR-QVLRY  613 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~-evl~~  613 (670)
                      .+.+++..||+.+|.+||++. +++++
T Consensus       222 ~~~~ll~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05592         222 EAKDCLSKLFERDPTKRLGVDGDIRQH  248 (316)
T ss_pred             HHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            567888999999999999875 56553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.8e-35  Score=320.35  Aligned_cols=238  Identities=27%  Similarity=0.359  Sum_probs=183.9

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .|...+.||+|+||+||+++...                   ..+.+.+|++++++++||||+++++++.+.+.+++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            57889999999999999997633                   12457789999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++|+|.+++.+..  .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus        82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~  156 (381)
T cd05626          82 YIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN  156 (381)
T ss_pred             cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence            999999999996543  58899999999999999999998   8999999999999999999999999999764311000


Q ss_pred             ----------------------------------------------ceeeccccCcCCCCccccccCCCCccchhHHHHH
Q 035655          504 ----------------------------------------------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGV  537 (670)
Q Consensus       504 ----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gv  537 (670)
                                                                    .......||+.|+|||++.+..++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~  236 (381)
T cd05626         157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV  236 (381)
T ss_pred             cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence                                                          0012347999999999999888999999999999


Q ss_pred             HHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHh--hccCCCCCCCCHHHHHHHh
Q 035655          538 LLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLL--CSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       538 vl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPs~~evl~~L  614 (670)
                      +++||++|+.||..........  ...........  +. .....    ..+.+++.+  |+.++|..||+++|+++|-
T Consensus       237 il~elltG~~Pf~~~~~~~~~~--~i~~~~~~~~~--~~-~~~~s----~~~~dli~~ll~~~~~~~~R~~~~~~l~hp  306 (381)
T cd05626         237 ILFEMLVGQPPFLAPTPTETQL--KVINWENTLHI--PP-QVKLS----PEAVDLITKLCCSAEERLGRNGADDIKAHP  306 (381)
T ss_pred             HHHHHHhCCCCCcCCCHHHHHH--HHHccccccCC--CC-CCCCC----HHHHHHHHHHccCcccccCCCCHHHHhcCc
Confidence            9999999999997643221111  11110000000  10 01122    233444433  6777888899999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=3.5e-35  Score=317.51  Aligned_cols=187  Identities=28%  Similarity=0.404  Sum_probs=163.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||+||++....                   ....+.+|+.++.+++||||+++++.+.+....++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            478899999999999999997643                   1235678999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++.+.  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~  155 (363)
T cd05628          81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH  155 (363)
T ss_pred             cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence            999999999999654  368999999999999999999998   999999999999999999999999999987543211


Q ss_pred             c----------------------------------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 035655          503 I----------------------------------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP  548 (670)
Q Consensus       503 ~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~p  548 (670)
                      .                                  .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P  235 (363)
T cd05628         156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP  235 (363)
T ss_pred             cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence            0                                  001234799999999999999999999999999999999999999


Q ss_pred             CCCCc
Q 035655          549 IDSDH  553 (670)
Q Consensus       549 f~~~~  553 (670)
                      |....
T Consensus       236 f~~~~  240 (363)
T cd05628         236 FCSET  240 (363)
T ss_pred             CCCCC
Confidence            97643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=3.3e-35  Score=305.87  Aligned_cols=231  Identities=27%  Similarity=0.357  Sum_probs=183.8

Q ss_pred             EeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          370 IGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ||+|+||+||++....                   ..+.+..|++++++++||||+++.+++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            6899999999987642                   113456899999999999999999999999999999999999999


Q ss_pred             hhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeec
Q 035655          431 DSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       431 ~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      ..++...  ....+++.+++.++.||+.||.|||+   .+|+||||||+||+++.++.+||+|||++........ ....
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~  156 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG  156 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence            9887542  33468999999999999999999998   8999999999999999999999999999976544322 2234


Q ss_pred             cccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHH
Q 035655          509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL  588 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~  588 (670)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||..............    ..   ....  ..++......
T Consensus       157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~----~~---~~~~--~~~~~~~~~~  227 (280)
T cd05608         157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ----RI---LNDS--VTYPDKFSPA  227 (280)
T ss_pred             cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH----hh---cccC--CCCcccCCHH
Confidence            5789999999999999999999999999999999999999975322111000000    00   0000  0122233456


Q ss_pred             HHHHHHhhccCCCCCCC-----CHHHHHHH
Q 035655          589 VLQLGLLCSHQKAEARP-----TMRQVLRY  613 (670)
Q Consensus       589 l~~l~~~Cl~~dP~~RP-----s~~evl~~  613 (670)
                      +.+++..||+.||.+||     +++++++|
T Consensus       228 ~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         228 SKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             HHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            78899999999999999     77888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.6e-35  Score=301.94  Aligned_cols=232  Identities=29%  Similarity=0.436  Sum_probs=187.1

Q ss_pred             ceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCch
Q 035655          368 EVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLD  431 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~  431 (670)
                      ++||+|+||.||+|....                ....|.+|++++++++||||++++++|...+..++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            368999999999997532                1236889999999999999999999999999999999999999999


Q ss_pred             hhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeecccc
Q 035655          432 SLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG  511 (670)
Q Consensus       432 ~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~g  511 (670)
                      +++.... ..+++..+..++.|++.+|.|||+   ++++||||||+||+++.++.+||+|||++...............+
T Consensus        81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (250)
T cd05085          81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI  156 (250)
T ss_pred             HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence            9986543 358999999999999999999998   899999999999999999999999999997654433222222345


Q ss_pred             CcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHH
Q 035655          512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL  590 (670)
Q Consensus       512 t~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~  590 (670)
                      +..|+|||++.++.++.++||||||++++|+++ |..||........   ........     ..    ..+......+.
T Consensus       157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~---~~~~~~~~-----~~----~~~~~~~~~~~  224 (250)
T cd05085         157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA---REQVEKGY-----RM----SCPQKCPDDVY  224 (250)
T ss_pred             cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH---HHHHHcCC-----CC----CCCCCCCHHHH
Confidence            678999999998899999999999999999998 9999975322111   11111110     01    11112345788


Q ss_pred             HHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          591 QLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       591 ~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +++.+|++.+|.+||++.++++.|.
T Consensus       225 ~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         225 KVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHcccCcccCCCHHHHHHHhc
Confidence            8999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1.5e-35  Score=306.17  Aligned_cols=237  Identities=24%  Similarity=0.406  Sum_probs=186.1

Q ss_pred             cccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeecc------Cee
Q 035655          365 KQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK------RDL  418 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~~~  418 (670)
                      .+.+.||+|+||.||+|....                    ..+.|.+|+.++++++||||++++++|...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            457889999999999987532                    235678899999999999999999987532      246


Q ss_pred             EEEEeccCCCCchhhcccC----CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          419 LLVYDYIPNGSLDSLLFDN----ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                      ++++||+++|+|.+++...    ....+++.+...++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence            8999999999999987432    23458999999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcce-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccc
Q 035655          495 ARLFDHGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       495 a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~  572 (670)
                      ++......... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......  .. ......+...  
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~-~~~~~~~~~~--  233 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EI-YDYLRQGNRL--  233 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HH-HHHHHcCCCC--
Confidence            98765433211 122346678999999998899999999999999999999 88898653221  11 1111111111  


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                         .    .+......+.+++.+||+++|.+||++.++++.|+.
T Consensus       234 ---~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         234 ---K----QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             ---C----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence               0    111223557899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=8.9e-36  Score=322.83  Aligned_cols=243  Identities=22%  Similarity=0.287  Sum_probs=189.6

Q ss_pred             HHhhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          358 YTATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       358 ~~~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      ....++|+..+.||+|+||.||++....                   ..+.+.+|+.+++.++||||+++++++.+++..
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            3445789999999999999999987643                   123467899999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++||||+++|+|.+++...   .+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++...
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~  192 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceec
Confidence            9999999999999998543   47889999999999999999998   89999999999999999999999999999876


Q ss_pred             cCCCcceeeccccCcCCCCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTG----KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ............||+.|+|||++.+.    .++.++||||+||++|||++|+.||......  ..............   
T Consensus       193 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--~~~~~i~~~~~~~~---  267 (370)
T cd05621         193 DETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--GTYSKIMDHKNSLN---  267 (370)
T ss_pred             ccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCcccC---
Confidence            54333233456799999999998654    3788999999999999999999999764321  11111111111000   


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhc
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEA--RPTMRQVLRYLN  615 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~  615 (670)
                        .  .........+.+++..|++.++.+  ||++.|+++|-+
T Consensus       268 --~--p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~  306 (370)
T cd05621         268 --F--PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF  306 (370)
T ss_pred             --C--CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence              0  011112345667777888755543  899999999843

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=2e-35  Score=303.64  Aligned_cols=239  Identities=25%  Similarity=0.464  Sum_probs=194.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..++||+|+||.||++....              ..+.|.+|++++++++|+||+++.+.+.+ ...+++|||++
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA   83 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence            4578889999999999999987532              23578899999999999999999999887 77899999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.+.....+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++...........
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  160 (260)
T cd05073          84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR  160 (260)
T ss_pred             CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence            9999999977655678999999999999999999998   8999999999999999999999999999986654332222


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ....++..|+|||++....++.++|+|||||+++|+++ |+.||...... ...+.    ..+...         .....
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~----~~~~~~---------~~~~~  227 (260)
T cd05073         161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL----ERGYRM---------PRPEN  227 (260)
T ss_pred             cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHH----hCCCCC---------CCccc
Confidence            33356678999999998889999999999999999999 99999753321 11111    111000         11112


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ....+.+++.+|++++|++||++.++++.|+.
T Consensus       228 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         228 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            23567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.4e-35  Score=304.30  Aligned_cols=230  Identities=24%  Similarity=0.364  Sum_probs=184.0

Q ss_pred             eEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          369 VIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       369 ~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      .||+|+||.||+|.+..                    ..+++.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            58999999999985421                    2357889999999999999999999885 45679999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce--e
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH--T  506 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~--~  506 (670)
                      +|.+++...  ..+++..+..++.|++.||+|||+   ++++||||||+||+++.++.+||+|||+++.........  .
T Consensus        81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  155 (257)
T cd05116          81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK  155 (257)
T ss_pred             cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence            999999654  358999999999999999999998   899999999999999999999999999998765433221  1


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....++..|+|||.+....++.++|||||||+++||++ |+.||......  ...... ..+..     +..    +...
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i-~~~~~-----~~~----~~~~  223 (257)
T cd05116         156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMI-ESGER-----MEC----PQRC  223 (257)
T ss_pred             CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-HCCCC-----CCC----CCCC
Confidence            22244678999999988889999999999999999998 99999764321  111111 11111     111    1123


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+.+++.+||+.||.+||++++|.+.|++
T Consensus       224 ~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         224 PPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             CHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            3567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.3e-35  Score=304.78  Aligned_cols=240  Identities=27%  Similarity=0.419  Sum_probs=191.1

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc------C
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK------R  416 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~------~  416 (670)
                      .++..|+..+.||+|+||.||+|....               ....+.+|+.+++++ +||||++++++|...      .
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            467788999999999999999997643               245788999999998 699999999998653      4


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..++||||+++++|.+++.......+++..+..++.|++.||+|||+   .+|+||||||+||++++++.+||+|||++.
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence            58999999999999999977555578999999999999999999998   899999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD  571 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~  571 (670)
                      ...... .......|+..|+|||++.     ...++.++|||||||++|||++|+.||.......... . .. ..    
T Consensus       160 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~-~-~~-~~----  231 (272)
T cd06637         160 QLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-L-IP-RN----  231 (272)
T ss_pred             eccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-H-Hh-cC----
Confidence            654322 2233457899999999886     3457889999999999999999999997533211111 0 00 00    


Q ss_pred             ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          572 VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       572 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                       ..+...   .......+.+++.+||+.+|.+||++.+++++
T Consensus       232 -~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         232 -PAPRLK---SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             -CCCCCC---CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence             011111   11223467889999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.8e-35  Score=314.53  Aligned_cols=228  Identities=25%  Similarity=0.329  Sum_probs=184.4

Q ss_pred             ceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          368 EVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++||+|+||.||++....                       ....+.+|+.+|++++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            679999999999986421                       123456899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++|+|.+++...  ..+.+..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... .
T Consensus        82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  155 (323)
T cd05584          82 LSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-T  155 (323)
T ss_pred             CCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-C
Confidence            9999999998654  357888999999999999999998   899999999999999999999999999987543322 2


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ......||+.|+|||++.+..++.++|||||||+++||++|+.||......  ...... ..+.      ..+    +..
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--~~~~~~-~~~~------~~~----~~~  222 (323)
T cd05584         156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--KTIDKI-LKGK------LNL----PPY  222 (323)
T ss_pred             cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--HHHHHH-HcCC------CCC----CCC
Confidence            233457999999999999888999999999999999999999999764321  111111 1111      011    111


Q ss_pred             HHHHHHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          585 EMELVLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      ....+.+++..||+++|.+||     ++++++++-
T Consensus       223 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~  257 (323)
T cd05584         223 LTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP  257 (323)
T ss_pred             CCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence            234577899999999999999     899988864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-35  Score=302.68  Aligned_cols=237  Identities=30%  Similarity=0.430  Sum_probs=195.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      .++|+..+.||+|+||.||++...+             ..+++.+|+.++++++|+||+++++++......++|+||+++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   84 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK   84 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence            3578889999999999999987643             246788999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|.+++.......+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.......    
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~----  157 (256)
T cd05039          85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD----  157 (256)
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccc----
Confidence            999999977655579999999999999999999998   9999999999999999999999999999986633221    


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ....+..|+|||.+.++.++.++||||||++++|+++ |+.||........   ........     .+    ..+...+
T Consensus       158 ~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~~~~~~~-----~~----~~~~~~~  225 (256)
T cd05039         158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VPHVEKGY-----RM----EAPEGCP  225 (256)
T ss_pred             cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH---HHHHhcCC-----CC----CCccCCC
Confidence            2345678999999988889999999999999999998 9999875432111   11111110     01    1111224


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+++.+||+.+|.+||+++++++.|+.
T Consensus       226 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         226 PEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            667889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=8e-36  Score=310.35  Aligned_cols=239  Identities=28%  Similarity=0.396  Sum_probs=190.8

Q ss_pred             CccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      +|+..+.||+|+||.||+|....                      ..+.|.+|+.++++++||||+++++++.+....++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            46678899999999999997421                      12457899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccC--------------CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc
Q 035655          421 VYDYIPNGSLDSLLFDN--------------ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN  486 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~  486 (670)
                      ++||+++++|.+++...              .+..+++..+.+++.|++.||.|||+   .+++||||||+||++++++.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCc
Confidence            99999999999998532              12358899999999999999999998   89999999999999999999


Q ss_pred             EEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHh
Q 035655          487 ARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQ  564 (670)
Q Consensus       487 ~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~  564 (670)
                      +||+|||+++....... .......+++.|+|||.+.++.++.++|||||||+++||++ |..||.....  .++... .
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~-i  239 (283)
T cd05091         163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVIEM-I  239 (283)
T ss_pred             eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH-H
Confidence            99999999886543321 12233456789999999988889999999999999999998 8888865322  111111 1


Q ss_pred             hcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       565 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......         ..+......+.+++..||+.+|.+||++++|++.|+.
T Consensus       240 ~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         240 RNRQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HcCCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            111111         1122334567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-35  Score=290.86  Aligned_cols=221  Identities=28%  Similarity=0.359  Sum_probs=183.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||.|+||+|.+.+.+.                   +.+...+|-.+|+.+.||.++++.+-|.+.+.+++||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            457788999999999999988755                   2234558999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||.+||.|..+|++.+  ++++...+-++.||+.||+|||+   ..|++|||||+|||||.+|.+||.|||+|+..... 
T Consensus       124 eyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-  197 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-  197 (355)
T ss_pred             eccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecCc-
Confidence            9999999999997664  59999999999999999999999   99999999999999999999999999999976542 


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                         +-+.+||+.|+|||+++...+...+|-|||||++|||++|..||..... +.-+  +....+++          .++
T Consensus       198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-~~iY--~KI~~~~v----------~fP  261 (355)
T KOG0616|consen  198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-IQIY--EKILEGKV----------KFP  261 (355)
T ss_pred             ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-HHHH--HHHHhCcc----------cCC
Confidence               5668999999999999999999999999999999999999999987543 1111  11111111          122


Q ss_pred             HHHHHHHHHHHHhhccCCCCCC
Q 035655          583 VAEMELVLQLGLLCSHQKAEAR  604 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~R  604 (670)
                      .-....+.+|+...++.|-.+|
T Consensus       262 ~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  262 SYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             cccCHHHHHHHHHHHhhhhHhh
Confidence            2222345566667778888877

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-35  Score=318.57  Aligned_cols=238  Identities=26%  Similarity=0.330  Sum_probs=187.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                   ....+.+|+.+++.++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            478899999999999999997643                   1234678999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  155 (364)
T cd05599          81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH  155 (364)
T ss_pred             CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence            999999999999654  358999999999999999999998   899999999999999999999999999987543211


Q ss_pred             cc-------------------------------------eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhC
Q 035655          503 IS-------------------------------------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATG  545 (670)
Q Consensus       503 ~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG  545 (670)
                      ..                                     ......||+.|+|||++....++.++|||||||+++||++|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G  235 (364)
T cd05599         156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG  235 (364)
T ss_pred             cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence            00                                     01124699999999999988999999999999999999999


Q ss_pred             CCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCC---HHHHHHHh
Q 035655          546 RRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVLRYL  614 (670)
Q Consensus       546 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~L  614 (670)
                      +.||........  .............  +.   .  ......+.+++..|+. +|.+|++   ++|++++-
T Consensus       236 ~~Pf~~~~~~~~--~~~i~~~~~~~~~--~~---~--~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~  297 (364)
T cd05599         236 YPPFCSDNPQET--YRKIINWKETLQF--PD---E--VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP  297 (364)
T ss_pred             CCCCCCCCHHHH--HHHHHcCCCccCC--CC---C--CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence            999976432111  1111111110000  10   0  0112445677777886 8999998   99998864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.4e-35  Score=304.35  Aligned_cols=238  Identities=24%  Similarity=0.409  Sum_probs=188.6

Q ss_pred             ccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe-----
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD-----  417 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~-----  417 (670)
                      |+..+.||+|+||.||+|....                     ....+.+|++.++.++||||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4567899999999999987531                     13468899999999999999999999876554     


Q ss_pred             -eEEEEeccCCCCchhhcccC----CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          418 -LLLVYDYIPNGSLDSLLFDN----ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       418 -~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                       .++++||+++|+|..++...    ....+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence             79999999999999998542    23468999999999999999999998   89999999999999999999999999


Q ss_pred             cCceeccCCCcce-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcc
Q 035655          493 GLARLFDHGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVL  570 (670)
Q Consensus       493 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~  570 (670)
                      |+++......... .....++..|+|||.+.+..++.++|||||||+++||++ |..||......  +..... ..+.. 
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~-~~~~~-  233 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYL-RHGNR-  233 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-HcCCC-
Confidence            9998665433211 122345678999999988889999999999999999999 88998653321  111111 11111 


Q ss_pred             cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       571 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                          +.    .+......+.+++.+||+.||.+||++.|+++.|+.
T Consensus       234 ----~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         234 ----LK----QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN  271 (273)
T ss_pred             ----CC----CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence                11    112234568889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=2.1e-35  Score=310.98  Aligned_cols=242  Identities=23%  Similarity=0.374  Sum_probs=193.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~  417 (670)
                      .++|...+.||+|+||.||++....                      ..+.+.+|+++++++ +||||++++++|...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            3568899999999999999885310                      124588999999999 79999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++|+||+++|+|.+++.......+++.++..++.|++.||.|||+   ++++|+||||+|||++.++.+||+|||+++.
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccccc
Confidence            9999999999999999976554458999999999999999999998   8999999999999999999999999999986


Q ss_pred             ccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          498 FDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       498 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      ....... ......++..|+|||.+.+..++.++|||||||+++||++ |+.||....... .. ......+.     .+
T Consensus       191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~-~~~~~~~~-----~~  263 (302)
T cd05055         191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KF-YKLIKEGY-----RM  263 (302)
T ss_pred             ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HH-HHHHHcCC-----cC
Confidence            5443211 1222356788999999998899999999999999999998 999987533210 00 01111110     00


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                          ..+......+.+++.+|++++|.+||++.|+++.|+.
T Consensus       264 ----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         264 ----AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence                0111123568889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-36  Score=317.59  Aligned_cols=235  Identities=24%  Similarity=0.430  Sum_probs=201.7

Q ss_pred             ccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ....++||+|-||.||+|+...                     ..+.|.+|..+|++++||||++|+|+|.+. ..++||
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wivm  469 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVM  469 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEE
Confidence            4456789999999999997522                     457899999999999999999999999764 689999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      |+++.|.|..||..+.. .|+......++.||+.||+|||+   ..+|||||.++|||+.+...+||+|||+++.++.+.
T Consensus       470 EL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~  545 (974)
T KOG4257|consen  470 ELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA  545 (974)
T ss_pred             ecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence            99999999999987654 79999999999999999999999   999999999999999999999999999999998887


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ....+...-+..|||||-+.-.+++.+||||.||+++||++. |.+||.+-.            ..++.-.+...-+...
T Consensus       546 yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk------------NsDVI~~iEnGeRlP~  613 (974)
T KOG4257|consen  546 YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK------------NSDVIGHIENGERLPC  613 (974)
T ss_pred             hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc------------ccceEEEecCCCCCCC
Confidence            766666677889999999999999999999999999999988 999998621            1122222222223345


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ++.++..+..|+-+||..+|.+||.+.|+...|.
T Consensus       614 P~nCPp~LYslmskcWayeP~kRPrftei~~~ls  647 (974)
T KOG4257|consen  614 PPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILS  647 (974)
T ss_pred             CCCCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence            6666778899999999999999999999988774

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=2.1e-35  Score=302.30  Aligned_cols=238  Identities=26%  Similarity=0.465  Sum_probs=193.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      .+|+..+.||+|+||.||++.+..              ...+|.+|++++++++|||++++++++......++|+||+++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            467788999999999999986542              236789999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|.+++.... ..++++.+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++............
T Consensus        84 ~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (256)
T cd05112          84 GCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST  159 (256)
T ss_pred             CcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence            99999986543 358999999999999999999998   89999999999999999999999999999865443222222


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...++.+|+|||.+.++.++.++||||||+++|||++ |+.||......  .........   .....+..       ..
T Consensus       160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~---~~~~~~~~-------~~  227 (256)
T cd05112         160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETINAG---FRLYKPRL-------AS  227 (256)
T ss_pred             CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHhCC---CCCCCCCC-------CC
Confidence            3345678999999998899999999999999999998 99999753321  111111111   11111221       23


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +.+.+++.+||+.+|.+||++.+++++|.
T Consensus       228 ~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         228 QSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            56889999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=2.2e-35  Score=308.31  Aligned_cols=243  Identities=24%  Similarity=0.405  Sum_probs=192.8

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      .+++|++.++||+|+||.||+|...+                      ....+.+|+.++++++||||+++++++.+.+.
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            45788999999999999999985321                      12357789999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCC--------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEE
Q 035655          418 LLLVYDYIPNGSLDSLLFDNE--------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL  489 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL  489 (670)
                      .++||||+++|+|.+++.+..        ...+++..+.+++.|++.||.|||+   ++++||||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence            999999999999999996522        2346778899999999999999998   89999999999999999999999


Q ss_pred             EeecCceeccCCCcce-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcC
Q 035655          490 GDFGLARLFDHGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLG  567 (670)
Q Consensus       490 ~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~  567 (670)
                      +|||+++......... .....++..|+|||.+.++.++.++|||||||+++||++ |..||......  +.. .....+
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--~~~-~~~~~~  237 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVL-KFVMDG  237 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHH-HHHHcC
Confidence            9999997554322111 122345678999999998899999999999999999999 78888653211  111 111111


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...     .    .+......+.+++.+|++.+|.+||++.++++.|+..
T Consensus       238 ~~~-----~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         238 GYL-----D----QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             CCC-----C----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            110     1    1112235788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.3e-35  Score=314.64  Aligned_cols=230  Identities=25%  Similarity=0.324  Sum_probs=182.7

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||++....                   ..+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            469999999999997643                   123466788888776 799999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|..++...  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~  154 (329)
T cd05618          81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTS  154 (329)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Cccc
Confidence            9999988654  358999999999999999999998   899999999999999999999999999987532211 2233


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC------cchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD------HFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~------~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ...||+.|+|||++.+..++.++|||||||+++||++|+.||...      ......+..........      .    .
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~----~  224 (329)
T cd05618         155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R----I  224 (329)
T ss_pred             cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC------C----C
Confidence            457999999999999999999999999999999999999999531      11112222222111111      1    1


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCC------HHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPT------MRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs------~~evl~~  613 (670)
                      +......+.+++..||+.||.+||+      +.++++|
T Consensus       225 p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         225 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            2222356778999999999999998      5787765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.4e-35  Score=332.49  Aligned_cols=243  Identities=23%  Similarity=0.313  Sum_probs=193.3

Q ss_pred             hHHHhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC-
Q 035655          356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR-  416 (670)
Q Consensus       356 ~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-  416 (670)
                      +.....++|.+.+.||+|+||.||++....                  ....+.+|+..+..++|+||++++..+...+ 
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~  105 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP  105 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence            334456799999999999999999997532                  2346778999999999999999988765432 


Q ss_pred             -------eeEEEEeccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcE
Q 035655          417 -------DLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA  487 (670)
Q Consensus       417 -------~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~  487 (670)
                             .+++||||+++|+|.++|...  ....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+
T Consensus       106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~v  182 (496)
T PTZ00283        106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLV  182 (496)
T ss_pred             cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCE
Confidence                   368999999999999998653  23468999999999999999999999   899999999999999999999


Q ss_pred             EEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhc
Q 035655          488 RLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHL  566 (670)
Q Consensus       488 kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~  566 (670)
                      ||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......  +.... ...
T Consensus       183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~--~~~~~-~~~  259 (496)
T PTZ00283        183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME--EVMHK-TLA  259 (496)
T ss_pred             EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHH-Hhc
Confidence            9999999987644221 2233457999999999999999999999999999999999999999764321  11111 111


Q ss_pred             CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       567 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +..    +     ..+......+.+++..||+.||.+||++.+++++
T Consensus       260 ~~~----~-----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        260 GRY----D-----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCC----C-----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            111    1     1112233567889999999999999999999875

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=3.2e-35  Score=300.93  Aligned_cols=238  Identities=29%  Similarity=0.424  Sum_probs=189.7

Q ss_pred             ccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      |+..+.||+|+||+||++.....                  .....+|+.++++++||||+++++++.+....++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            56789999999999999987551                  123346999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|.+++.  ....+++..++.++.|+++||.+||+   .+++|+||||+||++++++.++|+|||.+..... ....
T Consensus        81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-~~~~  154 (260)
T PF00069_consen   81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-NNEN  154 (260)
T ss_dssp             TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-TTSE
T ss_pred             cccccccccc--cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc-cccc
Confidence            9999999997  23468999999999999999999999   8999999999999999999999999999986522 2233


Q ss_pred             eeccccCcCCCCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          506 TTNVVGTIGYIAPELAR-TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      .....++..|+|||++. +..++.++||||+|+++++|++|+.||........................ .     ....
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~  228 (260)
T PF00069_consen  155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS-Q-----QSRE  228 (260)
T ss_dssp             BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT-T-----SHTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc-c-----ccch
Confidence            44567899999999998 788999999999999999999999999864211111111111111100000 0     0000


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+++..||+.||++||++.+++++
T Consensus       229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  229 KSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             SHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             hHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            12678899999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=2.7e-35  Score=302.61  Aligned_cols=231  Identities=24%  Similarity=0.374  Sum_probs=183.5

Q ss_pred             eEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCC
Q 035655          369 VIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS  429 (670)
Q Consensus       369 ~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gs  429 (670)
                      .||+|+||.||+|.+..                   ..+.|.+|+.++++++||||++++++|.. ...++|+||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence            38999999999986421                   13568899999999999999999999864 57899999999999


Q ss_pred             chhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee--e
Q 035655          430 LDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT--T  507 (670)
Q Consensus       430 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~--~  507 (670)
                      |.+++.... ..+++.++++++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++..........  .
T Consensus        81 L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  156 (257)
T cd05115          81 LNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS  156 (257)
T ss_pred             HHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence            999986543 468999999999999999999998   8999999999999999999999999999986544322111  1


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...++..|+|||.+.+..++.++|||||||+++|+++ |+.||......  +.. .....+..         ...+....
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~-~~~~~~~~---------~~~~~~~~  224 (257)
T cd05115         157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVM-SFIEQGKR---------LDCPAECP  224 (257)
T ss_pred             CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHH-HHHHCCCC---------CCCCCCCC
Confidence            1234578999999988889999999999999999996 99999753221  111 11111111         11122234


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+++..||+.+|++||++.+|.+.|+.
T Consensus       225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         225 PEMYALMKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence            677889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=4.3e-35  Score=311.72  Aligned_cols=232  Identities=24%  Similarity=0.314  Sum_probs=185.4

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccC-ceeeeeeeeeccCeeEEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHK-HLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~-nIv~l~g~~~~~~~~~lV~  422 (670)
                      +|+..+.||+|+||.||+|....                   ..+.+..|++++..++|+ +|+++++++.+.+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            47888999999999999997643                   224567899999999765 6888999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~  155 (324)
T cd05587          81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG  155 (324)
T ss_pred             cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence            999999999998654  358999999999999999999998   899999999999999999999999999987532221


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       .......||+.|+|||++.+..++.++|||||||+++||++|+.||........  ..... ..      .+.    ++
T Consensus       156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~--~~~i~-~~------~~~----~~  221 (324)
T cd05587         156 -KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL--FQSIM-EH------NVS----YP  221 (324)
T ss_pred             -CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH--HHHHH-cC------CCC----CC
Confidence             223345799999999999999999999999999999999999999976432111  11111 11      011    11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTM-----RQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  613 (670)
                      ......+.+++..||+.||.+||+.     ++++++
T Consensus       222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         222 KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            1223567789999999999999976     676665

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-35  Score=305.26  Aligned_cols=232  Identities=31%  Similarity=0.474  Sum_probs=183.2

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||+|.+.+                   ..+.+.+|+++++++ +||||++++++|...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999997532                   124677899999999 799999999999999999999999999


Q ss_pred             CCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          428 GSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       428 gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      |+|.+++....              ...+++.++..++.|++.||+|||+   .+++||||||+||++++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCC
Confidence            99999986532              1348899999999999999999998   899999999999999999999999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccc
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~  572 (670)
                      ++......  ........+..|+|||++....++.++|||||||+++||++ |..||......  +....... .     
T Consensus       158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~~~-~-----  227 (270)
T cd05047         158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQ-G-----  227 (270)
T ss_pred             Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--HHHHHHhC-C-----
Confidence            98632211  11111234567999999988889999999999999999997 99999653211  11111111 0     


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                          ...+.+......+.+++..||+.+|.+||++.++++.|+.
T Consensus       228 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~  267 (270)
T cd05047         228 ----YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  267 (270)
T ss_pred             ----CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence                0001111223467899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=5.5e-35  Score=301.07  Aligned_cols=242  Identities=25%  Similarity=0.392  Sum_probs=195.7

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                   ...++.+|+.++++++||||+++++++.+++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            467888999999999999998532                   2346788999999999999999999999999999999


Q ss_pred             eccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          423 DYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       423 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||+++++|.+++..  .....+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            99999999999864  223468999999999999999999998   8999999999999999999999999999876644


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      ... ......++..|+|||++.+..++.++||||||++++||++|..||..............      .....+...  
T Consensus       159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~--  229 (267)
T cd08229         159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI------EQCDYPPLP--  229 (267)
T ss_pred             CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhh------hcCCCCCCC--
Confidence            321 12334688999999999888899999999999999999999999975433222221111      111112111  


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       .....+.+.+++.+||+.+|.+|||+.+|++.++.
T Consensus       230 -~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~  264 (267)
T cd08229         230 -SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR  264 (267)
T ss_pred             -cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence             11234568889999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=6.2e-35  Score=316.42  Aligned_cols=248  Identities=23%  Similarity=0.295  Sum_probs=194.2

Q ss_pred             chhhHHHhhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeee
Q 035655          353 RYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCK  413 (670)
Q Consensus       353 ~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~  413 (670)
                      .+.++....++|+..+.||+|+||.||++....                   ..+.+.+|+.+++.++||||+++++++.
T Consensus        34 ~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~  113 (371)
T cd05622          34 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ  113 (371)
T ss_pred             HHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            345555667899999999999999999997643                   1234678999999999999999999999


Q ss_pred             ccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       414 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      +.+..++||||+++|+|.+++...   .++...+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||
T Consensus       114 ~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG  187 (371)
T cd05622         114 DDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFG  187 (371)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCC
Confidence            999999999999999999998543   47888899999999999999998   999999999999999999999999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCc
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELARTG----KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV  569 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~  569 (670)
                      +++..............||+.|+|||++...    .++.++|||||||++|||++|+.||......  ............
T Consensus       188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~~  265 (371)
T cd05622         188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKIMNHKNS  265 (371)
T ss_pred             ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCc
Confidence            9987654433333456799999999998653    3788999999999999999999999864321  111111111111


Q ss_pred             ccccCCCCCCcccHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhc
Q 035655          570 LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEA--RPTMRQVLRYLN  615 (670)
Q Consensus       570 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~  615 (670)
                      ....+       .......+.+++..|++.++.+  ||++++++++..
T Consensus       266 ~~~~~-------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~  306 (371)
T cd05622         266 LTFPD-------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF  306 (371)
T ss_pred             ccCCC-------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence            11111       1122355677888899744443  789999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=2.6e-35  Score=304.01  Aligned_cols=238  Identities=27%  Similarity=0.491  Sum_probs=192.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .+|+..+.||+|+||.||+|....                    ..+.|.+|+.++++++||||+++++++..++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            567888999999999999986521                    235688999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++++|.+++.... ..+++.+++.++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++.....
T Consensus        84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd05066          84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  159 (267)
T ss_pred             EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence            99999999999997654 368999999999999999999998   89999999999999999999999999999876543


Q ss_pred             Ccceee--ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcc-hhHHHHHHHhhcCCcccccCCCC
Q 035655          502 KISHTT--NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHF-ILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       502 ~~~~~~--~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~-~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      .....+  ...++..|+|||++.+..++.++|||||||+++|+++ |+.||..... ......   .....      +. 
T Consensus       160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~---~~~~~------~~-  229 (267)
T cd05066         160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI---EEGYR------LP-  229 (267)
T ss_pred             cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHH---hCCCc------CC-
Confidence            322211  1233568999999998889999999999999999886 9999965322 111111   11000      01 


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                         .....+..+.+++.+|++++|.+||++.++++.|+.
T Consensus       230 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         230 ---APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             ---CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence               111223567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.6e-35  Score=295.82  Aligned_cols=259  Identities=23%  Similarity=0.278  Sum_probs=201.8

Q ss_pred             cCccccceEeeeCceeEEEeeccchHH------------------HHHHHHHHHhccccCceeeeeeeeecc--CeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTRMR------------------EFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~~~------------------~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~lV  421 (670)
                      +.|+..++|++|.||.||+|+++.+.+                  ...+||.+|.+++|||||.+..+....  +..|+|
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            458888999999999999999876321                  245999999999999999999887643  679999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      ||||+. +|...+.... +++...++..++.|+++|++|||+   ..|+|||||++|+|+...|.+||+|||+|+.+...
T Consensus       156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp  230 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP  230 (419)
T ss_pred             HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence            999976 8888887654 579999999999999999999999   89999999999999999999999999999988764


Q ss_pred             CcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCc-chhHHHHHHHhhcCCcccccCCCC--
Q 035655          502 KISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDH-FILVDWVLEFQHLGQVLDVVDPNL--  577 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~-~~~~~~~~~~~~~~~~~~~~d~~l--  577 (670)
                      . ...+..+-|..|.|||++.+. .|++..|+||+|||+.||++++..|.+.. ....+.  -+...+...+.+.|.+  
T Consensus       231 ~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~--If~llGtPte~iwpg~~~  307 (419)
T KOG0663|consen  231 L-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDK--IFKLLGTPSEAIWPGYSE  307 (419)
T ss_pred             c-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHH--HHHHhCCCccccCCCccc
Confidence            3 445667889999999988765 58999999999999999999999987632 222222  2222232223332322  


Q ss_pred             -----------------CCcccHH-HHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC-CCCCCCCCCCCc
Q 035655          578 -----------------GSSYVVA-EMELVLQLGLLCSHQKAEARPTMRQVLRYLNG-DELLPIIDNWSS  628 (670)
Q Consensus       578 -----------------~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~-~~~~p~~~~~~~  628 (670)
                                       +..+... ..+.-.+++...+..||.+|-|+.|.++|=.- +.|+|..|...+
T Consensus       308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~P  377 (419)
T KOG0663|consen  308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFP  377 (419)
T ss_pred             cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcC
Confidence                             1112111 23556778888899999999999999998654 346666554433

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.5e-34  Score=297.48  Aligned_cols=243  Identities=25%  Similarity=0.388  Sum_probs=198.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||+|....                   ..+.+.+|++++++++|+||+++++++...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            578899999999999999997642                   2456889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          423 DYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       423 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||+++++|.+++...  ....+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            999999999998642  33468999999999999999999998   8999999999999999999999999999876544


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      ... ......++..|+|||.+.+..++.++|||||||+++||++|+.||........+....... +.     .+...  
T Consensus       159 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~-----~~~~~--  229 (267)
T cd08224         159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK-CD-----YPPLP--  229 (267)
T ss_pred             CCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc-CC-----CCCCC--
Confidence            321 1233468899999999988889999999999999999999999997654333332211111 11     01111  


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                       .......+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       230 -~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         230 -ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             -hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence             113345678999999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.1e-34  Score=304.23  Aligned_cols=246  Identities=26%  Similarity=0.404  Sum_probs=190.9

Q ss_pred             hcCccccceEeeeCceeEEEeecc---------------------------------chHHHHHHHHHHHhccccCceee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP---------------------------------TRMREFAAEIESLGRLRHKHLVN  407 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~---------------------------------~~~~~f~~Ei~~L~~l~H~nIv~  407 (670)
                      .++|+..++||+|+||.||++...                                 ....+|.+|++++++++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            356889999999999999987321                                 02356889999999999999999


Q ss_pred             eeeeeeccCeeEEEEeccCCCCchhhcccCCc---------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCc
Q 035655          408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNEN---------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN  478 (670)
Q Consensus       408 l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~N  478 (670)
                      +++++...+..++||||+++|+|.+++.....         ..+++.+++.++.|++.||+|||+   .+++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~N  160 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhe
Confidence            99999999999999999999999999865321         247888999999999999999998   899999999999


Q ss_pred             EEecCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCcch
Q 035655          479 VLIDADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT--GRRPIDSDHFI  555 (670)
Q Consensus       479 ILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t--G~~pf~~~~~~  555 (670)
                      ||++.++.+||+|||+++........ ......++..|++||...++.++.++|||||||++|||++  |..||......
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05095         161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE  240 (296)
T ss_pred             EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence            99999999999999999765433211 1222345678999999888889999999999999999998  77888642211


Q ss_pred             -hHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          556 -LVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       556 -~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                       ............. .....+.     +......+.+++.+||+.||.+||++.+|++.|+
T Consensus       241 ~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         241 QVIENTGEFFRDQG-RQVYLPK-----PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHHHHhhcc-ccccCCC-----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence             1111111111110 0111111     1122356789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.5e-35  Score=315.38  Aligned_cols=229  Identities=23%  Similarity=0.285  Sum_probs=184.0

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      +.||+|+||.||++....                   ....+..|++++++++||||+++.+++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999987532                   1245678999999999999999999999999999999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeec
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      +|.+++...  ..+++.++..++.||+.||.|||+  ..+|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~  155 (325)
T cd05594          81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKT  155 (325)
T ss_pred             cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-ccccc
Confidence            999988654  358999999999999999999996  2689999999999999999999999999987543222 12234


Q ss_pred             cccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHH
Q 035655          509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL  588 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~  588 (670)
                      ..||+.|+|||++.+..++.++|||||||+++||++|+.||........  . ......      ...+..    .....
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~--~-~~i~~~------~~~~p~----~~~~~  222 (325)
T cd05594         156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--F-ELILME------EIRFPR----TLSPE  222 (325)
T ss_pred             ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH--H-HHHhcC------CCCCCC----CCCHH
Confidence            5799999999999999999999999999999999999999976432111  0 011011      011111    12345


Q ss_pred             HHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          589 VLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       589 l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      +.+++.+||+.||.+|+     +++++++|-
T Consensus       223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  253 (325)
T cd05594         223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQHK  253 (325)
T ss_pred             HHHHHHHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence            67889999999999996     899999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.1e-35  Score=311.41  Aligned_cols=240  Identities=27%  Similarity=0.405  Sum_probs=191.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKR  416 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~  416 (670)
                      ++|.+.+.||+|+||.||++....                        ...++.+|+++++++ +||||++++++|...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            568899999999999999885310                        234677899999999 7999999999999999


Q ss_pred             eeEEEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID  482 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld  482 (670)
                      ..++|+||+++|+|.+++....              ...++|.++++++.|++.||+|||+   .+++||||||+||+++
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~  174 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT  174 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEc
Confidence            9999999999999999997542              1358999999999999999999998   8999999999999999


Q ss_pred             CCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHH
Q 035655          483 ADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWV  560 (670)
Q Consensus       483 ~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~  560 (670)
                      .++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||+++||++ |+.||......  +..
T Consensus       175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~--~~~  252 (307)
T cd05098         175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELF  252 (307)
T ss_pred             CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHH
Confidence            9999999999998765432211 1122234578999999998889999999999999999998 88898653321  111


Q ss_pred             HHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       561 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .... ....         .+.+......+.+++..||+.+|.+||++.++++.|+.
T Consensus       253 ~~~~-~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~  298 (307)
T cd05098         253 KLLK-EGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  298 (307)
T ss_pred             HHHH-cCCC---------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence            1111 1110         01112233567789999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=2.5e-35  Score=310.31  Aligned_cols=242  Identities=25%  Similarity=0.403  Sum_probs=193.3

Q ss_pred             hcCccccceEeeeCceeEEEeecc------------------------chHHHHHHHHHHHhcc-ccCceeeeeeeeecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP------------------------TRMREFAAEIESLGRL-RHKHLVNLQGWCKRK  415 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~------------------------~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~  415 (670)
                      ..+|...+.||+|+||.||++...                        ...+.+.+|+.+++.+ +||||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            456888899999999999988531                        0234678999999999 899999999999999


Q ss_pred             CeeEEEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                      +..++||||+++|+|.+++....              ...++|.++..++.||++||.|||+   .+++||||||+||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEE
Confidence            99999999999999999997532              2358899999999999999999998   899999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHH
Q 035655          482 DADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW  559 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~  559 (670)
                      +.++.+||+|||+++........ ......++..|+|||++.+..++.++||||||++++||++ |..||.....  .+.
T Consensus       171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~  248 (304)
T cd05101         171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EEL  248 (304)
T ss_pred             cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHH
Confidence            99999999999999876543222 1223356678999999988889999999999999999998 7888865321  111


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...... ....         ..+......+.+++.+||+.+|.+||++.|+++.|+..
T Consensus       249 ~~~~~~-~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~  296 (304)
T cd05101         249 FKLLKE-GHRM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI  296 (304)
T ss_pred             HHHHHc-CCcC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence            111111 1100         01112345678899999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=5.1e-35  Score=311.17  Aligned_cols=231  Identities=23%  Similarity=0.304  Sum_probs=183.2

Q ss_pred             ccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHH---hccccCceeeeeeeeeccCeeEEE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESL---GRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L---~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      |++.+.||+|+||.||++....                   ..+.+.+|++++   ++++||||+++++++..++..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            5678899999999999997643                   123455565544   567899999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|..++.+   ..+++.++..++.||+.||.|||+   .+++||||||+|||++.++.+||+|||+++.....
T Consensus        81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05589          81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF  154 (324)
T ss_pred             EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence            999999999988854   358999999999999999999998   99999999999999999999999999998753322


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      . .......|++.|+|||.+.+..++.++|||||||++|||++|+.||.......  ....... ..      +..    
T Consensus       155 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~--~~~~i~~-~~------~~~----  220 (324)
T cd05589         155 G-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE--VFDSIVN-DE------VRY----  220 (324)
T ss_pred             C-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh-CC------CCC----
Confidence            1 22334679999999999999899999999999999999999999997643211  1111111 11      111    


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      +......+.+++.+||+.||.+||     ++.+++++-
T Consensus       221 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~  258 (324)
T cd05589         221 PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP  258 (324)
T ss_pred             CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence            112235567899999999999999     678887764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.8e-35  Score=319.64  Aligned_cols=238  Identities=28%  Similarity=0.329  Sum_probs=184.3

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      +|+..+.||+|+||.||++....                   ....+.+|+++|++++||||+++++.+.+++.+++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            68899999999999999997643                   12456789999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC-
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK-  502 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~-  502 (670)
                      |+++|+|.+++.+.  ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++..+.... 
T Consensus        82 ~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~  156 (376)
T cd05598          82 YIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD  156 (376)
T ss_pred             CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence            99999999999654  358889999999999999999998   899999999999999999999999999975321000 


Q ss_pred             -----------------------------------------cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHH
Q 035655          503 -----------------------------------------ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLE  541 (670)
Q Consensus       503 -----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~e  541 (670)
                                                               ........||+.|||||++.+..++.++|||||||++||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye  236 (376)
T cd05598         157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE  236 (376)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence                                                     000123479999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCC---CHHHHHHHhc
Q 035655          542 IATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARP---TMRQVLRYLN  615 (670)
Q Consensus       542 l~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~evl~~L~  615 (670)
                      |++|+.||........  ............  .+. ....    ...+.+++..|+ .+|.+|+   ++.|+++|-.
T Consensus       237 ll~G~~Pf~~~~~~~~--~~~i~~~~~~~~--~~~-~~~~----s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~  303 (376)
T cd05598         237 MLVGQPPFLADTPAET--QLKVINWETTLH--IPS-QAKL----SREASDLILRLC-CGAEDRLGKNGADEIKAHPF  303 (376)
T ss_pred             hhhCCCCCCCCCHHHH--HHHHhccCcccc--CCC-CCCC----CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCC
Confidence            9999999986432211  111111000000  011 1112    233445555555 4999999   8999998743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2e-35  Score=329.57  Aligned_cols=241  Identities=23%  Similarity=0.303  Sum_probs=196.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccc-cCceeeeeeeee-c------cC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLR-HKHLVNLQGWCK-R------KR  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~-~------~~  416 (670)
                      ..+.++.+.|.+|||+.||.+.+..                ..+...+||++|++|+ |+|||.+++.+. .      .-
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            4456778999999999999997644                3456779999999998 999999999331 1      23


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      +.+|+||||++|+|-+++..+....|++.++++|+.|+++|+++||. ++++|||||||.+||||..+++.||||||-|.
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            68999999999999999987666679999999999999999999998 56789999999999999999999999999986


Q ss_pred             eccCCCcc--------eeeccccCcCCCCcccc---ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhh
Q 035655          497 LFDHGKIS--------HTTNVVGTIGYIAPELA---RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQH  565 (670)
Q Consensus       497 ~~~~~~~~--------~~~~~~gt~~y~aPE~~---~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~  565 (670)
                      ..-.....        ......-|+.|.|||.+   .+..+++|+|||||||+||-|+....||+...            
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg------------  262 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG------------  262 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc------------
Confidence            43322210        01122468999999965   56789999999999999999999999998632            


Q ss_pred             cCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       566 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                         -+.+++..+.-.-.......+.+|+..||++||.+||++.||+.++...
T Consensus       263 ---~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l  311 (738)
T KOG1989|consen  263 ---KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL  311 (738)
T ss_pred             ---ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence               1233444443333356778999999999999999999999999988654

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.5e-35  Score=300.35  Aligned_cols=231  Identities=29%  Similarity=0.451  Sum_probs=185.5

Q ss_pred             ceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++||+|+||.||+|+...                    ..+++.+|+++++++.||||+++++++. ....++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            469999999999986421                    2356889999999999999999999876 4568999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee-
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-  506 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~-  506 (670)
                      |+|.+++.+..  .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++.......... 
T Consensus        80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~  154 (257)
T cd05060          80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA  154 (257)
T ss_pred             CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence            99999997654  68999999999999999999998   8999999999999999999999999999986654332211 


Q ss_pred             -eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          507 -TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       507 -~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                       ....++..|+|||.+.+..++.++|||||||+++||++ |+.||...... ...+.   .. ....         ..+.
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~---~~-~~~~---------~~~~  221 (257)
T cd05060         155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML---ES-GERL---------PRPE  221 (257)
T ss_pred             ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH---Hc-CCcC---------CCCC
Confidence             12234568999999998899999999999999999998 99999753321 11111   11 1110         1111


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .....+.+++.+||+++|.+||++.++++.|++.
T Consensus       222 ~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         222 ECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            2235678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.9e-35  Score=307.53  Aligned_cols=245  Identities=26%  Similarity=0.409  Sum_probs=190.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------------------hHHHHHHHHHHHhccccCceeeee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------------------RMREFAAEIESLGRLRHKHLVNLQ  409 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------------------~~~~f~~Ei~~L~~l~H~nIv~l~  409 (670)
                      .++|+..+.||+|+||.||++....                               ....|.+|++++++++||||++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            3578889999999999999875321                               134688999999999999999999


Q ss_pred             eeeeccCeeEEEEeccCCCCchhhcccCC----------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcE
Q 035655          410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNE----------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV  479 (670)
Q Consensus       410 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NI  479 (670)
                      +++...+..++||||+++++|.+++....          ...+++..++.++.|++.||+|||+   .+++||||||+||
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Ni  160 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNC  160 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhE
Confidence            99999999999999999999999985432          1247899999999999999999998   8999999999999


Q ss_pred             EecCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh--CCCCCCCCcc-h
Q 035655          480 LIDADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT--GRRPIDSDHF-I  555 (670)
Q Consensus       480 Lld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t--G~~pf~~~~~-~  555 (670)
                      +++.++.+||+|||++......... ......++..|+|||.+.++.++.++|||||||+++||++  |..||..... .
T Consensus       161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~  240 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ  240 (295)
T ss_pred             EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence            9999999999999999765433211 1222345778999999988899999999999999999998  5667764221 1


Q ss_pred             hHHHHHHHhhc-CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          556 LVDWVLEFQHL-GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       556 ~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ........... ........       +......+.+++.+||+.+|.+||++.+|++.|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         241 VIENTGEFFRNQGRQIYLSQ-------TPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHhhhhccccccCCC-------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            11111111111 11000111       1112357889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=5.6e-35  Score=310.71  Aligned_cols=232  Identities=23%  Similarity=0.302  Sum_probs=185.3

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      +|...+.||+|+||.||++....                   ..+.+..|..++..+ +|++|+++++++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            47788999999999999997643                   123456677888777 5899999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~  155 (323)
T cd05616          81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG  155 (323)
T ss_pred             cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence            999999999998654  358999999999999999999998   899999999999999999999999999997543222


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ..... ...      .    .++
T Consensus       156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~--~~~i~-~~~------~----~~p  221 (323)
T cd05616         156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSIM-EHN------V----AYP  221 (323)
T ss_pred             -CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH--HHHHH-hCC------C----CCC
Confidence             123345799999999999999999999999999999999999999986432211  11111 111      1    111


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTM-----RQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  613 (670)
                      ......+.+++..|++.+|.+|++.     .++.++
T Consensus       222 ~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         222 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence            2233567889999999999999984     666654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.5e-34  Score=298.62  Aligned_cols=237  Identities=26%  Similarity=0.382  Sum_probs=181.6

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      +.||+|+||.||+|....                   ....|.+|+.++++++||||+++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            368999999999986421                   1246888999999999999999999999999999999999999


Q ss_pred             CchhhcccCC---ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          429 SLDSLLFDNE---NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       429 sL~~~l~~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      +|.+++....   ....++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++.........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence            9999996532   2356788888999999999999998   899999999999999999999999999997544332211


Q ss_pred             -eeccccCcCCCCccccccC-------CCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          506 -TTNVVGTIGYIAPELARTG-------KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       506 -~~~~~gt~~y~aPE~~~~~-------~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                       .....++..|+|||++.+.       .++.++||||||++++||++ |+.||........   .............++.
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~  234 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV---LTYTVREQQLKLPKPR  234 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH---HHHHhhcccCCCCCCc
Confidence             1234578889999988642       35789999999999999997 9999975322111   1111112222222333


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +...    ..+.+.+++..|| .+|.+||+++||++.|+
T Consensus       235 ~~~~----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         235 LKLP----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             cCCC----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            2211    2244667888898 68999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.2e-34  Score=296.57  Aligned_cols=235  Identities=22%  Similarity=0.351  Sum_probs=192.3

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      +|+..++||+|+||.||++....                 ..+.+.+|+.++++++|+||+++++.+..++.+++|+||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            47788999999999999986532                 2356778999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|.+++.......+++..++.++.|++.||.|||+   .+++|+||||+||++++++.++|+|||++....... ..
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~  156 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AY  156 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccc-cc
Confidence            99999999876555568999999999999999999998   899999999999999999999999999998664432 12


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .....|+..|+|||++.+..++.++||||||+++++|++|+.||........  ..... .+...     .+    +...
T Consensus       157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~-~~~~~-----~~----~~~~  224 (255)
T cd08219         157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL--ILKVC-QGSYK-----PL----PSHY  224 (255)
T ss_pred             cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH--HHHHh-cCCCC-----CC----Cccc
Confidence            2345788999999999888899999999999999999999999976432211  11111 11110     01    1122


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ...+.+++.+||+.||.+||++.+++..
T Consensus       225 ~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         225 SYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            3457788999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=4.1e-35  Score=304.54  Aligned_cols=242  Identities=26%  Similarity=0.391  Sum_probs=192.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      .++|+..++||+|+||.||+|....                     ..+++.+|+.++++++||||++++++|.. ...+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence            4578889999999999999986321                     23467789999999999999999999975 4578


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +++||+++|+|.+++..+. ..+++.+++.++.|++.||+|||+   ++++||||||+|||++.++.+||+|||+++...
T Consensus        85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109          85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence            9999999999999997643 368999999999999999999998   899999999999999999999999999998765


Q ss_pred             CCCcce-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCC
Q 035655          500 HGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       500 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ...... .....++..|+|||.+.+..++.++|||||||++|||++ |..||...... +..+.    ..+...     .
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~----~~~~~~-----~  231 (279)
T cd05109         161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL----EKGERL-----P  231 (279)
T ss_pred             cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----HCCCcC-----C
Confidence            432211 112245678999999998899999999999999999998 99998753321 11111    111100     0


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCCC
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELL  620 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  620 (670)
                          .+......+.+++..||+.||.+||++.++++.|+.....
T Consensus       232 ----~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         232 ----QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             ----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence                0112234678899999999999999999999988755443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=7e-35  Score=317.30  Aligned_cols=236  Identities=26%  Similarity=0.339  Sum_probs=180.8

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .|...++||+|+||.||+++...                   ..+.+.+|+.++++++||||+++++.+.+++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            58889999999999999997633                   12457789999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC-
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK-  502 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~-  502 (670)
                      |+++|+|.+++.+.  ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++....... 
T Consensus        82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~  156 (382)
T cd05625          82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD  156 (382)
T ss_pred             CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence            99999999999654  358899999999999999999998   899999999999999999999999999975321000 


Q ss_pred             ---------------------------------------------cceeeccccCcCCCCccccccCCCCccchhHHHHH
Q 035655          503 ---------------------------------------------ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGV  537 (670)
Q Consensus       503 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gv  537 (670)
                                                                   ........||+.|+|||++.+..++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv  236 (382)
T cd05625         157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV  236 (382)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence                                                         00012347999999999999989999999999999


Q ss_pred             HHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCC---HHHHHHH
Q 035655          538 LLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVLRY  613 (670)
Q Consensus       538 vl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~  613 (670)
                      ++|||++|+.||........  ............  .|.. ....    ..+.+++..|+ .+|.+|++   ++++++|
T Consensus       237 il~elltG~~Pf~~~~~~~~--~~~i~~~~~~~~--~p~~-~~~s----~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  305 (382)
T cd05625         237 ILYEMLVGQPPFLAQTPLET--QMKVINWQTSLH--IPPQ-AKLS----PEASDLIIKLC-RGPEDRLGKNGADEIKAH  305 (382)
T ss_pred             HHHHHHhCCCCCCCCCHHHH--HHHHHccCCCcC--CCCc-ccCC----HHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence            99999999999976432111  111111000000  0110 1122    23344444444 48999987   8888875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.8e-35  Score=304.68  Aligned_cols=252  Identities=24%  Similarity=0.387  Sum_probs=188.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeec--cCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--KRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--~~~~  418 (670)
                      .++|+..+.||+|+||.||++....                    ..+.|.+|++++++++||||+++++++..  ....
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   82 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   82 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence            3578889999999999999986320                    23578899999999999999999998754  3468


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++..
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          83 RLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             EEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            99999999999999996543 358999999999999999999998   89999999999999999999999999999876


Q ss_pred             cCCCccee--eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhh----cCCcccc
Q 035655          499 DHGKISHT--TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQH----LGQVLDV  572 (670)
Q Consensus       499 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~----~~~~~~~  572 (670)
                      ........  ....++..|+|||++.+..++.++|||||||+++||++|..|+................    ...+.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05081         159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL  238 (284)
T ss_pred             cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH
Confidence            44322111  11233456999999988889999999999999999999887764321111000000000    0000000


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +........+......+.+++.+||+.+|++|||++|+++.|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         239 LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence            11010011112233568899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=5.1e-35  Score=311.96  Aligned_cols=230  Identities=25%  Similarity=0.319  Sum_probs=183.6

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||++....                   ..+.+..|..++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            469999999999997643                   123467899999988 699999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++...  ..+++..+..++.|++.||.|||+   ++++||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~~~  154 (329)
T cd05588          81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DTTS  154 (329)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCC-Cccc
Confidence            9999988654  369999999999999999999998   899999999999999999999999999987432211 2233


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC------cchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD------HFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~------~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||+..      .....++.........      ..+    
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----  224 (329)
T cd05588         155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ------IRI----  224 (329)
T ss_pred             cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC------CCC----
Confidence            457999999999999999999999999999999999999999631      1111222222221111      111    


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCC------HHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPT------MRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs------~~evl~~  613 (670)
                      +......+.+++..||+.||.+||+      ++++++|
T Consensus       225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            1122345778999999999999997      7888876

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.3e-34  Score=302.36  Aligned_cols=236  Identities=25%  Similarity=0.357  Sum_probs=189.7

Q ss_pred             ccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      |+..+.||+|+||.||++....                   ..+.+.+|+.++++++|+||+++++.+.+.+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            6677899999999999987643                   123467899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.......+++.++..++.|++.||.|||+   .+++||||||+||+++.++.++|+|||++.......  
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--  156 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--  156 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--
Confidence            999999999876555569999999999999999999998   999999999999999999999999999987654322  


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-HHHHHHhhcCCcccccCCCCCCcccH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-DWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      ......|+..|+|||++.+..++.++|||||||+++||++|+.||........ ........  .    .....    ..
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~--~----~~~~~----~~  226 (285)
T cd05630         157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--E----VQEEY----SE  226 (285)
T ss_pred             cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh--h----hhhhc----Cc
Confidence            12234789999999999999999999999999999999999999975322111 00000000  0    00111    11


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHh
Q 035655          584 AEMELVLQLGLLCSHQKAEARPT-----MRQVLRYL  614 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  614 (670)
                      .....+.+++..||+.||.+||+     ++|++++-
T Consensus       227 ~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~  262 (285)
T cd05630         227 KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHP  262 (285)
T ss_pred             cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcCh
Confidence            12345778899999999999999     88988754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-34  Score=320.88  Aligned_cols=249  Identities=21%  Similarity=0.217  Sum_probs=189.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccch----------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR----------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~----------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ..+|.+.+.||+|+||.||++.....          ...+.+|+++|++|+|+||+++++++..++..++|||++. ++|
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L  246 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDL  246 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCH
Confidence            45789999999999999999987652          2356789999999999999999999999999999999994 789


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc-eeecc
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS-HTTNV  509 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~  509 (670)
                      .+++.... ..++|.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++........ .....
T Consensus       247 ~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~  322 (461)
T PHA03211        247 YTYLGARL-RPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGI  322 (461)
T ss_pred             HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccccc
Confidence            88886543 369999999999999999999998   89999999999999999999999999999866433211 22345


Q ss_pred             ccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc---------chhHHHHHHHhhc-CCcccc-------
Q 035655          510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH---------FILVDWVLEFQHL-GQVLDV-------  572 (670)
Q Consensus       510 ~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~---------~~~~~~~~~~~~~-~~~~~~-------  572 (670)
                      .||..|+|||++.+..++.++|||||||++|||++|..|+....         ..+...+...... ......       
T Consensus       323 ~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~  402 (461)
T PHA03211        323 AGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVS  402 (461)
T ss_pred             CCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHH
Confidence            79999999999999999999999999999999999876653211         0111111110000 000000       


Q ss_pred             ---------cCCCCCCcccH---HHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          573 ---------VDPNLGSSYVV---AEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       573 ---------~d~~l~~~~~~---~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                               ..+........   .....+.+++.+||+.||.+|||+.|++++-
T Consensus       403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp  456 (461)
T PHA03211        403 QYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP  456 (461)
T ss_pred             HHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence                     00000000000   1123577899999999999999999999863

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=5.3e-35  Score=310.58  Aligned_cols=227  Identities=24%  Similarity=0.296  Sum_probs=182.2

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||++....                   ..+.+..|+.++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999997643                   123456788888876 699999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++.+.  ..+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~  154 (320)
T cd05590          81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTS  154 (320)
T ss_pred             chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Cccc
Confidence            9999998654  358999999999999999999998   899999999999999999999999999987543222 2233


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||.......  .... ......      ..    +.....
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~~~~-i~~~~~------~~----~~~~~~  221 (320)
T cd05590         155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD--LFEA-ILNDEV------VY----PTWLSQ  221 (320)
T ss_pred             ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--HHHH-HhcCCC------CC----CCCCCH
Confidence            4579999999999998899999999999999999999999997643211  1111 111110      11    111234


Q ss_pred             HHHHHHHhhccCCCCCCCCH------HHHHHH
Q 035655          588 LVLQLGLLCSHQKAEARPTM------RQVLRY  613 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~------~evl~~  613 (670)
                      .+.+++..|++.||.+||+.      +++++|
T Consensus       222 ~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         222 DAVDILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             HHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence            57789999999999999998      677665

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=4.7e-35  Score=311.01  Aligned_cols=228  Identities=25%  Similarity=0.319  Sum_probs=183.4

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||+|....                   ..+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            469999999999997643                   123466788888866 799999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|..++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~  154 (321)
T cd05591          81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTT  154 (321)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCC-cccc
Confidence            9999998654  358999999999999999999998   899999999999999999999999999987543222 2233


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ...... ...   ...|       .....
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~--~~~~i~-~~~---~~~p-------~~~~~  221 (321)
T cd05591         155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD--LFESIL-HDD---VLYP-------VWLSK  221 (321)
T ss_pred             ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH--HHHHHH-cCC---CCCC-------CCCCH
Confidence            4579999999999998899999999999999999999999998643211  111111 111   0011       11224


Q ss_pred             HHHHHHHhhccCCCCCCC-------CHHHHHHHh
Q 035655          588 LVLQLGLLCSHQKAEARP-------TMRQVLRYL  614 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RP-------s~~evl~~L  614 (670)
                      .+.+++..||+.||.+||       ++++++++-
T Consensus       222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp  255 (321)
T cd05591         222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP  255 (321)
T ss_pred             HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence            577889999999999999       888888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=5.9e-35  Score=304.44  Aligned_cols=245  Identities=24%  Similarity=0.340  Sum_probs=185.3

Q ss_pred             CccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhcc---ccCceeeeeeeeec-----cC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRL---RHKHLVNLQGWCKR-----KR  416 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l---~H~nIv~l~g~~~~-----~~  416 (670)
                      +|+..+.||+|+||.||++.....                  ...+.+|+.+++++   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            477889999999999999976431                  13456788877766   69999999998864     24


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..++|+||++ ++|.+++.......+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~~  156 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLAR  156 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCccc
Confidence            5899999997 589998876555568999999999999999999999   899999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc---CCc---
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL---GQV---  569 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~---~~~---  569 (670)
                      ......  ......||..|+|||++.+..++.++|||||||+++||++|+.||...... ...........   ...   
T Consensus       157 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T cd07863         157 IYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD  234 (288)
T ss_pred             cccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence            664322  223456899999999999889999999999999999999999999753221 11111110000   000   


Q ss_pred             c----cccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 L----DVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ~----~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .    ....+...   ........+.+.+++..|++.||.+||++.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0    00000000   01112234567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=3.9e-35  Score=306.10  Aligned_cols=241  Identities=27%  Similarity=0.454  Sum_probs=192.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|+..+.||+|+||.||++....                      ..++|.+|+.++++++||||++++++|..+...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            4678899999999999999986421                      135688999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCC--------------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCc
Q 035655          419 LLVYDYIPNGSLDSLLFDNE--------------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN  478 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~N  478 (670)
                      ++|+||+++|+|.+++....                    ...+++.+++.++.|++.||.|||+   .+++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence            99999999999999996421                    1347899999999999999999998   899999999999


Q ss_pred             EEecCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchh
Q 035655          479 VLIDADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFIL  556 (670)
Q Consensus       479 ILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~  556 (670)
                      |+++.++.+||+|||+++....... ........+..|+|||.+.+..++.++|||||||+++||++ |..||...... 
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-  239 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-  239 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence            9999999999999999876543221 11222345678999999988899999999999999999998 88888643211 


Q ss_pred             HHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          557 VDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       557 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       +.... ...+....         .+......+.+++.+||+.+|.+||++.|+++.|+.
T Consensus       240 -~~~~~-~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         240 -EVIYY-VRDGNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             -HHHHH-HhcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence             11111 11121111         111223568889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=4.9e-35  Score=317.37  Aligned_cols=246  Identities=22%  Similarity=0.326  Sum_probs=187.9

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC-----eeE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR-----DLL  419 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-----~~~  419 (670)
                      +|+..+.||+|+||.||++....                  ..+.+.+|+++++.++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            47888999999999999997532                  2346789999999999999999999998776     789


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +|+||+. ++|.+++...  ..+++..+..++.||+.||.|||+   .+++||||||+|||++.++.+||+|||+++...
T Consensus        81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~  154 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEE  154 (372)
T ss_pred             EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence            9999996 5788877543  368999999999999999999998   899999999999999999999999999998765


Q ss_pred             CCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCC---------
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQ---------  568 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~---------  568 (670)
                      ...........+|+.|+|||++.+. .++.++|||||||+++||++|+.||...... ..+..........         
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~  234 (372)
T cd07853         155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE  234 (372)
T ss_pred             cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence            4433333445789999999998764 4789999999999999999999999763321 1111100000000         


Q ss_pred             -----cc-cccCC-CCC--CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          569 -----VL-DVVDP-NLG--SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       569 -----~~-~~~d~-~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                           +. ....+ ...  ........+.+.+++.+|++.||.+||++.|++++-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  289 (372)
T cd07853         235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP  289 (372)
T ss_pred             HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence                 00 00000 000  001111245678899999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.3e-35  Score=316.58  Aligned_cols=239  Identities=24%  Similarity=0.289  Sum_probs=185.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|...++||+|+||.||++....                   ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            468889999999999999987532                   1245678999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.+....
T Consensus        81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~  155 (377)
T cd05629          81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH  155 (377)
T ss_pred             eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence            999999999999654  358899999999999999999998   899999999999999999999999999996432110


Q ss_pred             c------------c----------------------------------eeeccccCcCCCCccccccCCCCccchhHHHH
Q 035655          503 I------------S----------------------------------HTTNVVGTIGYIAPELARTGKASCSTDVFAYG  536 (670)
Q Consensus       503 ~------------~----------------------------------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~G  536 (670)
                      .            .                                  ......||+.|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  235 (377)
T cd05629         156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG  235 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence            0            0                                  00124699999999999988999999999999


Q ss_pred             HHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCC---CCCHHHHHHH
Q 035655          537 VLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEA---RPTMRQVLRY  613 (670)
Q Consensus       537 vvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~---RPs~~evl~~  613 (670)
                      |+++||++|+.||........  .............  |..     ......+.+++..|++ +|.+   ||++.|++++
T Consensus       236 vil~elltG~~Pf~~~~~~~~--~~~i~~~~~~~~~--p~~-----~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         236 AIMFECLIGWPPFCSENSHET--YRKIINWRETLYF--PDD-----IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             hhhhhhhcCCCCCCCCCHHHH--HHHHHccCCccCC--CCC-----CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            999999999999976432111  1111110110111  110     0112446677778887 6665   5699999997


Q ss_pred             hc
Q 035655          614 LN  615 (670)
Q Consensus       614 L~  615 (670)
                      -.
T Consensus       306 p~  307 (377)
T cd05629         306 PF  307 (377)
T ss_pred             CC
Confidence            53

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=8.6e-35  Score=300.15  Aligned_cols=242  Identities=23%  Similarity=0.359  Sum_probs=191.3

Q ss_pred             hHHHhhcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       356 ~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      |++.+++++.....||+|+||.||+|....                ..+.+.+|+.++++++|+||+++++++..++..+
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK   81 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence            345567788888899999999999997543                2357889999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCcccc--CHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-CCcEEEEeecCce
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVL--SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLAR  496 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-~~~~kL~DFGla~  496 (670)
                      +|+||+++++|.+++..... .+  ++..+..++.|++.||+|||+   .+|+||||||+||+++. ++.+||+|||++.
T Consensus        82 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~  157 (268)
T cd06624          82 IFMEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSK  157 (268)
T ss_pred             EEEecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence            99999999999999975422 34  888899999999999999998   89999999999999986 6799999999987


Q ss_pred             eccCCCcceeeccccCcCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHHhhcCCccccc
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEFQHLGQVLDVV  573 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~~~~~~~~~~~  573 (670)
                      ....... ......|+..|+|||++.+..  ++.++||||||++++||++|+.||....... ..+.....       ..
T Consensus       158 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~-------~~  229 (268)
T cd06624         158 RLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF-------KI  229 (268)
T ss_pred             ecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh-------cc
Confidence            6543221 122346889999999986643  7889999999999999999999986432111 11110000       01


Q ss_pred             CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       574 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .+    ..+......+.+++.+||+.+|.+||++.|++++
T Consensus       230 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         230 HP----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             CC----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            11    1222233567889999999999999999999975

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=4.8e-35  Score=309.81  Aligned_cols=242  Identities=25%  Similarity=0.414  Sum_probs=191.4

Q ss_pred             hcCccccceEeeeCceeEEEeecc------------------------chHHHHHHHHHHHhcc-ccCceeeeeeeeecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP------------------------TRMREFAAEIESLGRL-RHKHLVNLQGWCKRK  415 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~------------------------~~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~  415 (670)
                      ..+|.+.++||+|+||.||++...                        .....+.+|+++++++ +||||++++++|...
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            356888999999999999998531                        0234678999999999 699999999999999


Q ss_pred             CeeEEEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                      +..++|+||+++|+|.+++....              ...++|.++.+++.|++.||.|||+   .+++||||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLV  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEE
Confidence            99999999999999999996532              2358999999999999999999998   899999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHH
Q 035655          482 DADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW  559 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~  559 (670)
                      +.++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||......  + 
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~-  244 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--E-  244 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--H-
Confidence            99999999999999865432211 1112234567999999988889999999999999999999 89998653321  1 


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...........         ..+......+.+++.+||+.+|.+||++.|+++.|+..
T Consensus       245 ~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~  293 (314)
T cd05099         245 LFKLLREGHRM---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV  293 (314)
T ss_pred             HHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            11111111111         11112234677899999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=6.1e-35  Score=298.39  Aligned_cols=233  Identities=30%  Similarity=0.487  Sum_probs=191.0

Q ss_pred             ceEeeeCceeEEEeeccch--------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPTR--------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~~--------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||++.....                    .+.+.+|++.+++++|+||+++++++......++|+||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4689999999999977531                    46788999999999999999999999999999999999999


Q ss_pred             CCchhhcccCC-------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          428 GSLDSLLFDNE-------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       428 gsL~~~l~~~~-------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ++|.+++....       ...+++.++.+++.|++.||+|||+   ++++||||||+||++++++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            99999997652       3569999999999999999999999   9999999999999999999999999999987655


Q ss_pred             CCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          501 GKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       501 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ... .......++..|+|||.+....++.++||||+|++++||++ |+.||......  ... .....+.     ..   
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~-~~~~~~~-----~~---  226 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--EVL-EYLRKGY-----RL---  226 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--HHH-HHHHcCC-----CC---
Confidence            331 12233467889999999988889999999999999999999 69999764221  111 1111111     01   


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                       ..+......+.+++.+||+.+|.+||++.|++++|+
T Consensus       227 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         227 -PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             -CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence             111222466888999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=2.2e-34  Score=300.55  Aligned_cols=235  Identities=27%  Similarity=0.373  Sum_probs=188.4

Q ss_pred             ccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      |+..+.||+|+||+||++....                   ....+.+|++++++++|+||+++.+.+..++..++|+||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            6677899999999999987642                   113467899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.......+++..+..++.|++.||.|||+   .+|+||||||+||++++++.+||+|||++.......  
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--  156 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE--  156 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence            999999999876555579999999999999999999998   899999999999999999999999999997654322  


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-HHHHHHhhcCCcccccCCCCCCcccH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-DWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      ......|+..|+|||++.+..++.++|+|||||+++||++|+.||........ .....     ..... .+.    +..
T Consensus       157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~-----~~~~~-~~~----~~~  226 (285)
T cd05632         157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDR-----RVLET-EEV----YSA  226 (285)
T ss_pred             cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-----hhhcc-ccc----cCc
Confidence            22345789999999999988999999999999999999999999975332111 11111     00000 011    112


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 035655          584 AEMELVLQLGLLCSHQKAEARPT-----MRQVLRY  613 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  613 (670)
                      .....+.+++..|++.||.+||+     +++++++
T Consensus       227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         227 KFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             cCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            22345678899999999999999     6676664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.6e-35  Score=315.21  Aligned_cols=183  Identities=25%  Similarity=0.345  Sum_probs=158.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch----------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCC
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR----------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS  429 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~----------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gs  429 (670)
                      ...+|.+.+.||+|+||.||+|.....          ......|+.++++++||||+++++++......++|+|++ .++
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~~  142 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY-SSD  142 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc-CCc
Confidence            346799999999999999999987542          234457999999999999999999999999999999999 468


Q ss_pred             chhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeecc
Q 035655          430 LDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV  509 (670)
Q Consensus       430 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~  509 (670)
                      |.+++.... ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  ......
T Consensus       143 l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~~~~  216 (357)
T PHA03209        143 LYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PAFLGL  216 (357)
T ss_pred             HHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccC--cccccc
Confidence            988886543 468999999999999999999998   89999999999999999999999999999753322  122345


Q ss_pred             ccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCC
Q 035655          510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI  549 (670)
Q Consensus       510 ~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf  549 (670)
                      .||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus       217 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             cccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999999999965554

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.3e-35  Score=298.79  Aligned_cols=235  Identities=23%  Similarity=0.358  Sum_probs=196.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ..+|++.+.||+|.||+|-++....                   ++....+||++|+.|+||||+.++.+|+.++...||
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv  131 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV  131 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence            3467788999999999999987522                   234566999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||..+|.|++|+.+.  ..|++.+.+.+++||.+|+.|+|.   ++++|||||.+|||||.++++||+||||+.++...
T Consensus       132 MEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~  206 (668)
T KOG0611|consen  132 MEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK  206 (668)
T ss_pred             EEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhccc
Confidence            9999999999999655  469999999999999999999998   99999999999999999999999999999888765


Q ss_pred             CcceeeccccCcCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t-~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .  -.++++|++-|.+||++.+.+|. +..|-||||++||-|+.|..||++.+..  ..+.+ ...+.+.+--.      
T Consensus       207 k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk--~lvrQ-Is~GaYrEP~~------  275 (668)
T KOG0611|consen  207 K--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK--RLVRQ-ISRGAYREPET------  275 (668)
T ss_pred             c--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH--HHHHH-hhcccccCCCC------
Confidence            4  34567999999999999998884 7899999999999999999999873321  11111 12232222111      


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                           +....-|+.|||..||.+|.|+.+|..|.+-
T Consensus       276 -----PSdA~gLIRwmLmVNP~RRATieDiAsHWWv  306 (668)
T KOG0611|consen  276 -----PSDASGLIRWMLMVNPERRATIEDIASHWWV  306 (668)
T ss_pred             -----CchHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence                 1234568889999999999999999999863

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=4.8e-35  Score=302.17  Aligned_cols=237  Identities=30%  Similarity=0.524  Sum_probs=190.0

Q ss_pred             CccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .|+..+.||+|+||.||+|....                    ..++|..|+.++++++||||+++++++.++...++|+
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            47788999999999999987531                    2357889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++.... ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......
T Consensus        85 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~  160 (269)
T cd05065          85 EFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  160 (269)
T ss_pred             ecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence            9999999999997643 368999999999999999999998   899999999999999999999999999987654432


Q ss_pred             ccee-e-ccc--cCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCC
Q 035655          503 ISHT-T-NVV--GTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       503 ~~~~-~-~~~--gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      .... . ...  .+..|+|||.+.+..++.++|||||||+++|+++ |..||...... ...+.   ....      .. 
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i---~~~~------~~-  230 (269)
T cd05065         161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI---EQDY------RL-  230 (269)
T ss_pred             cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH---HcCC------cC-
Confidence            1111 1 111  2457999999998999999999999999999886 99999753321 11111   1100      00 


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                         ..+.+.+..+.+++..||+.+|.+||+++++++.|+.
T Consensus       231 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         231 ---PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             ---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence               0111223557889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=3.7e-35  Score=320.55  Aligned_cols=242  Identities=23%  Similarity=0.364  Sum_probs=191.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~  417 (670)
                      .++|...++||+|+||.||+|++..                      ..+.+.+|+++|.++. ||||++++++|...+.
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            4567788999999999999997421                      1246889999999997 9999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCC-----------------------------------------------------------
Q 035655          418 LLLVYDYIPNGSLDSLLFDNE-----------------------------------------------------------  438 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~-----------------------------------------------------------  438 (670)
                      .++|+||+++|+|.+++++..                                                           
T Consensus       116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (401)
T cd05107         116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM  195 (401)
T ss_pred             cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence            999999999999999996532                                                           


Q ss_pred             -------------------------------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          439 -------------------------------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       439 -------------------------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                                                           ...++|..+++++.|++.||.|||+   ++++||||||+|||+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl  272 (401)
T cd05107         196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLI  272 (401)
T ss_pred             hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEE
Confidence                                                 1247888899999999999999998   899999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHH
Q 035655          482 DADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW  559 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~  559 (670)
                      ++++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||+++||++ |+.||.......  .
T Consensus       273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~--~  350 (401)
T cd05107         273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE--Q  350 (401)
T ss_pred             eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH--H
Confidence            9999999999999986543221 11223457789999999998889999999999999999998 899986532111  1


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .......+.     .+    ..+......+.+++..||+.+|.+||++++|++.|++
T Consensus       351 ~~~~~~~~~-----~~----~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~  398 (401)
T cd05107         351 FYNAIKRGY-----RM----AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD  398 (401)
T ss_pred             HHHHHHcCC-----CC----CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            111111110     01    1111223567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=5.4e-35  Score=299.20  Aligned_cols=235  Identities=28%  Similarity=0.417  Sum_probs=190.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS  429 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gs  429 (670)
                      ++|...+.||+|+||.||++...+            ....+.+|+.++++++||||+++++++... ..++|+||+++++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~   84 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGN   84 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCC
Confidence            457888999999999999986533            335788999999999999999999998664 4799999999999


Q ss_pred             chhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeecc
Q 035655          430 LDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV  509 (670)
Q Consensus       430 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~  509 (670)
                      |.+++.......+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......    ...
T Consensus        85 L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----~~~  157 (254)
T cd05083          85 LVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----DNS  157 (254)
T ss_pred             HHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC----CCC
Confidence            9999977655578999999999999999999998   899999999999999999999999999987543321    122


Q ss_pred             ccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHH
Q 035655          510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL  588 (670)
Q Consensus       510 ~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~  588 (670)
                      ..+..|+|||.+.++.++.++|||||||+++||++ |+.||......  ...... ..+..     +    .........
T Consensus       158 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~-~~~~~-----~----~~~~~~~~~  225 (254)
T cd05083         158 KLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EVKECV-EKGYR-----M----EPPEGCPAD  225 (254)
T ss_pred             CCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHH-hCCCC-----C----CCCCcCCHH
Confidence            34568999999988899999999999999999998 99999754321  111111 11110     0    111123356


Q ss_pred             HHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          589 VLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       589 l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +.+++.+||+.+|.+||+++++++.|+.
T Consensus       226 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         226 VYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            7889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.5e-34  Score=298.52  Aligned_cols=237  Identities=24%  Similarity=0.357  Sum_probs=179.4

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      +.||+|+||.||+|....                   ....|.+|++.++.++||||+++++.|.+....++||||+++|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            358999999999985421                   1346789999999999999999999999999999999999999


Q ss_pred             CchhhcccCCc---cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          429 SLDSLLFDNEN---FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       429 sL~~~l~~~~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      +|.+++.....   ...++.....++.||+.||+|||+   .+|+||||||+|||+++++.+||+|||++..........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  157 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI  157 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence            99999976432   235788889999999999999998   899999999999999999999999999987543322111


Q ss_pred             -eeccccCcCCCCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          506 -TTNVVGTIGYIAPELART-------GKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       506 -~~~~~gt~~y~aPE~~~~-------~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                       .....++..|+|||++..       ..++.++|||||||++|||++ |..||.......  ..... ..........+.
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~-~~~~~~~~~~~~  234 (269)
T cd05042         158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--VLKQV-VREQDIKLPKPQ  234 (269)
T ss_pred             ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHHH-hhccCccCCCCc
Confidence             122345678999998743       356889999999999999999 788886532111  01111 111112222232


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +...    ....+.+++..|| .||.+||++++|++.|.
T Consensus       235 ~~~~----~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         235 LDLK----YSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             cccc----CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            2222    2344566777888 59999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.5e-34  Score=308.69  Aligned_cols=241  Identities=23%  Similarity=0.285  Sum_probs=185.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..++||+|+||.||++....                   ....|.+|+.++..++|+||+++++++.+.+.+++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            468889999999999999997643                   1234778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++.+.. ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus        81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~  156 (332)
T cd05623          81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG  156 (332)
T ss_pred             eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence            9999999999997643 368999999999999999999998   999999999999999999999999999997654433


Q ss_pred             cceeeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          503 ISHTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ........||+.|+|||++.     ...++.++|||||||++|||++|+.||......  ..............  -|..
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~--~~~~~i~~~~~~~~--~p~~  232 (332)
T cd05623         157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKIMNHKERFQ--FPAQ  232 (332)
T ss_pred             cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCCcccc--CCCc
Confidence            33333457999999999886     346789999999999999999999999764321  11111111110000  0111


Q ss_pred             CCcccHHHHHHHHHHHHhhcc--CCCCCCCCHHHHHHHh
Q 035655          578 GSSYVVAEMELVLQLGLLCSH--QKAEARPTMRQVLRYL  614 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~--~dP~~RPs~~evl~~L  614 (670)
                      .    ......+.+++..|+.  +++..||+++|+++|-
T Consensus       233 ~----~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~  267 (332)
T cd05623         233 V----TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP  267 (332)
T ss_pred             c----ccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence            1    1122345556666554  4445578999999873

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=7.3e-35  Score=300.46  Aligned_cols=233  Identities=27%  Similarity=0.458  Sum_probs=186.0

Q ss_pred             ceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          368 EVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +.||+|+||.||+|....                       ...+|.+|++++++++||||++++++|...+..++|+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999987531                       234677899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCC-----ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-----cEEEEeecC
Q 035655          425 IPNGSLDSLLFDNE-----NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-----NARLGDFGL  494 (670)
Q Consensus       425 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-----~~kL~DFGl  494 (670)
                      +++++|.+++.+..     ...+++.+++.++.|++.||.|||+   .+++|+||||+||+++.+.     .+||+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            99999999996532     2348899999999999999999998   8999999999999999887     899999999


Q ss_pred             ceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccc
Q 035655          495 ARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       495 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~  572 (670)
                      ++....... .......++..|+|||++.++.++.++|||||||+++||++ |+.||......  +...... .+.    
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~~~-~~~----  230 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQHVT-AGG----  230 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHHHh-cCC----
Confidence            976543221 11222345788999999999999999999999999999998 99998653221  1111111 110    


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                           ....+......+.+++.+||+++|.+||+++++++.|+
T Consensus       231 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         231 -----RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             -----ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence                 00111223456789999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-34  Score=307.72  Aligned_cols=242  Identities=24%  Similarity=0.296  Sum_probs=185.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                   ..+.|.+|+.+++.++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            468889999999999999987643                   1234778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++.+.. ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||++.......
T Consensus        81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (331)
T cd05597          81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG  156 (331)
T ss_pred             ecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence            9999999999996532 358999999999999999999998   899999999999999999999999999997665433


Q ss_pred             cceeeccccCcCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          503 ISHTTNVVGTIGYIAPELART-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ........||+.|+|||++..     ..++.++|||||||++|||++|+.||......  +............. +.+. 
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~--~~~~~i~~~~~~~~-~~~~-  232 (331)
T cd05597         157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKIMNHKEHFQ-FPPD-  232 (331)
T ss_pred             CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH--HHHHHHHcCCCccc-CCCc-
Confidence            333334579999999999863     45788999999999999999999999764321  11111111111111 1111 


Q ss_pred             CCcccHHHHHHHHHHHHhhc--cCCCCCCCCHHHHHHHhc
Q 035655          578 GSSYVVAEMELVLQLGLLCS--HQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl--~~dP~~RPs~~evl~~L~  615 (670)
                      ...    ..+.+.+++..|+  ..++..||+++++++|-.
T Consensus       233 ~~~----~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~  268 (331)
T cd05597         233 VTD----VSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF  268 (331)
T ss_pred             cCC----CCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence            111    1233445555544  455555899999999843

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=9.8e-35  Score=297.28  Aligned_cols=236  Identities=25%  Similarity=0.379  Sum_probs=193.9

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|+||.||.+....                  ..+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            47888999999999888776422                  235688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.+.....+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........ 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-  156 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-  156 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence            999999999977655578999999999999999999998   8999999999999999999999999999987654332 


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ......+++.|+|||.+.+..++.++||||||++++||++|+.||......  +...... .+....         ....
T Consensus       157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--~~~~~~~-~~~~~~---------~~~~  224 (256)
T cd08221         157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL--NLVVKIV-QGNYTP---------VVSV  224 (256)
T ss_pred             cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHH-cCCCCC---------Cccc
Confidence            233456899999999998888899999999999999999999999763321  1111111 111111         1122


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ....+.+++.+||+.+|.+||+++++++++
T Consensus       225 ~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         225 YSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             cCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            235678899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=8.4e-35  Score=308.75  Aligned_cols=227  Identities=25%  Similarity=0.317  Sum_probs=183.6

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||++....                   ....+..|+.+++.+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999997643                   123456788888888 699999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|..++.+.  ..+++.++..++.|++.||.|||+   .+++||||||+|||+++++.+||+|||+++...... ....
T Consensus        81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~  154 (318)
T cd05570          81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTTS  154 (318)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cccc
Confidence            9999998654  358999999999999999999998   899999999999999999999999999987532221 2223


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||+++||++|+.||........  ... .....      +.    ++.....
T Consensus       155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~--~~~-i~~~~------~~----~~~~~~~  221 (318)
T cd05570         155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL--FQS-ILEDE------VR----YPRWLSK  221 (318)
T ss_pred             ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH--HHH-HHcCC------CC----CCCcCCH
Confidence            45789999999999999999999999999999999999999976432111  111 11111      11    1112235


Q ss_pred             HHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 035655          588 LVLQLGLLCSHQKAEARPTM-----RQVLRY  613 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~-----~evl~~  613 (670)
                      .+.+++..||+.||.+||++     .+++++
T Consensus       222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             HHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            67889999999999999999     888876

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.1e-34  Score=299.09  Aligned_cols=240  Identities=23%  Similarity=0.351  Sum_probs=189.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|+..+.||+|+||.||+|....                ....+.+|+.++++++||||+++++++...+..++|+||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            3568889999999999999997532                234577899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||++....... .
T Consensus        88 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~  161 (267)
T cd06646          88 CGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-A  161 (267)
T ss_pred             CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccc-c
Confidence            9999999998654  358999999999999999999998   899999999999999999999999999998664322 1


Q ss_pred             eeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ......|+..|+|||.+.   ...++.++|||||||+++||++|+.||..........   .....   ....+....  
T Consensus       162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~---~~~~~---~~~~~~~~~--  233 (267)
T cd06646         162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKS---NFQPPKLKD--  233 (267)
T ss_pred             ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe---eeecC---CCCCCCCcc--
Confidence            123346889999999874   3457889999999999999999999986422110000   00000   001111110  


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .......+.+++.+||+.+|.+||++++++++|
T Consensus       234 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         234 KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            112235678899999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=2.1e-34  Score=305.44  Aligned_cols=227  Identities=24%  Similarity=0.327  Sum_probs=180.5

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||++....                   ....+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            469999999999997643                   123455677777754 899999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~  154 (316)
T cd05620          81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRAS  154 (316)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Ccee
Confidence            9999998654  358999999999999999999998   899999999999999999999999999987532222 2234


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||+++||++|+.||.......  .. ......      .+.+..    ....
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~--~~-~~~~~~------~~~~~~----~~~~  221 (316)
T cd05620         155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE--LF-ESIRVD------TPHYPR----WITK  221 (316)
T ss_pred             ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HH-HHHHhC------CCCCCC----CCCH
Confidence            5679999999999999999999999999999999999999997643211  11 111111      111111    1234


Q ss_pred             HHHHHHHhhccCCCCCCCCHH-HHHHH
Q 035655          588 LVLQLGLLCSHQKAEARPTMR-QVLRY  613 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~-evl~~  613 (670)
                      .+.+++..||+.||.+||++. ++++|
T Consensus       222 ~~~~li~~~l~~dP~~R~~~~~~~~~h  248 (316)
T cd05620         222 ESKDILEKLFERDPTRRLGVVGNIRGH  248 (316)
T ss_pred             HHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            567889999999999999984 66644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=7.4e-35  Score=301.64  Aligned_cols=240  Identities=22%  Similarity=0.366  Sum_probs=192.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      ++|+..+.||+|+||.||+|+...                      ..+.+.+|++++++++||||+++++++.+....+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            578889999999999999998531                      1356889999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCc-------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          420 LVYDYIPNGSLDSLLFDNEN-------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                      +||||+++|+|.+++.....       ..+++..+..++.|++.||+|||+   .+++||||||+||+++.++.++|+||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence            99999999999999975441       258999999999999999999998   89999999999999999999999999


Q ss_pred             cCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCccc
Q 035655          493 GLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLD  571 (670)
Q Consensus       493 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~  571 (670)
                      |+++..............++..|+|||.+.+..++.++||||||++++||++ |..||......  ..... ...+....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~-~~~~~~~~  238 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNR-LQAGKLEL  238 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHH-HHcCCcCC
Confidence            9987543332222333456778999999988889999999999999999999 88888642211  11111 11111110


Q ss_pred             ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          572 VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       572 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                              .........+.+++.+||+.+|.+||++.|+++.|+
T Consensus       239 --------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         239 --------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             --------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence                    011122356888999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=1.4e-34  Score=305.59  Aligned_cols=244  Identities=22%  Similarity=0.332  Sum_probs=191.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..+.||+|+||.||++....                 ...++.+|++++++++||||+++++.|..++..++|+||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            468899999999999999987532                 124578999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.+.  ..+++..+..++.|+++||.|||+  ..+++||||||+|||++.++.+||+|||++.......  
T Consensus        81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--  154 (308)
T cd06615          81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--  154 (308)
T ss_pred             cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc--
Confidence            9999999999654  458999999999999999999997  2589999999999999999999999999987553321  


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhc-CC---------------
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHL-GQ---------------  568 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~-~~---------------  568 (670)
                       .....|+..|+|||++.+..++.++|||||||+++||++|+.||................. ..               
T Consensus       155 -~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (308)
T cd06615         155 -ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS  233 (308)
T ss_pred             -cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence             2345788999999999888899999999999999999999999865321111110000000 00               


Q ss_pred             ------------cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          569 ------------VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       569 ------------~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                                  ......+.+..   ......+.+++.+||+.+|++||+++|++++..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~  289 (308)
T cd06615         234 PRPMAIFELLDYIVNEPPPKLPS---GAFSDEFQDFVDKCLKKNPKERADLKELTKHPF  289 (308)
T ss_pred             cchhhHHHHHHHHhcCCCccCcC---cccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence                        00000011100   012345789999999999999999999998754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1e-34  Score=297.13  Aligned_cols=235  Identities=25%  Similarity=0.387  Sum_probs=191.1

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec-cCeeEEEEe
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR-KRDLLLVYD  423 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-~~~~~lV~E  423 (670)
                      +|+..+.||+|++|.||++....                  ..+.+.+|++++++++|+|++++++.+.. ...++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            47889999999999999987533                  22457789999999999999999998764 446899999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++++|.+++.......+++.++..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++....... 
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-  156 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-  156 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence            9999999999977555578999999999999999999998   899999999999999999999999999998764332 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      .......+++.|+|||++.+..++.++|||||||+++||++|+.||......  ....... .+..     +.    .+.
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~-~~~~-----~~----~~~  224 (257)
T cd08223         157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN--SLVYRII-EGKL-----PP----MPK  224 (257)
T ss_pred             CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHH-hcCC-----CC----Ccc
Confidence            2233456889999999999999999999999999999999999999754321  1111111 1111     11    112


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .....+.+++.+|++.+|.+||++.+++++
T Consensus       225 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         225 DYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             ccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            233567899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.1e-34  Score=307.69  Aligned_cols=227  Identities=24%  Similarity=0.368  Sum_probs=180.9

Q ss_pred             ceEeeeCceeEEEeeccch-------------------HHHHHHHHHHHhc-cccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGR-LRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~-l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||+|.....                   .+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4699999999999986431                   2345567788876 4899999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~  154 (316)
T cd05619          81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTC  154 (316)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Ccee
Confidence            9999998654  358999999999999999999998   899999999999999999999999999987532221 2234


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||......  ....... ..      .+...    .....
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~-~~------~~~~~----~~~~~  221 (316)
T cd05619         155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIR-MD------NPCYP----RWLTR  221 (316)
T ss_pred             eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHH-hC------CCCCC----ccCCH
Confidence            457999999999999889999999999999999999999999764321  1111111 11      11111    11234


Q ss_pred             HHHHHHHhhccCCCCCCCCHH-HHHHH
Q 035655          588 LVLQLGLLCSHQKAEARPTMR-QVLRY  613 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~-evl~~  613 (670)
                      .+.+++..||+.||.+||++. ++.++
T Consensus       222 ~~~~li~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05619         222 EAKDILVKLFVREPERRLGVKGDIRQH  248 (316)
T ss_pred             HHHHHHHHHhccCHhhcCCChHHHHcC
Confidence            567889999999999999997 66553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.4e-35  Score=312.77  Aligned_cols=227  Identities=23%  Similarity=0.306  Sum_probs=182.2

Q ss_pred             ceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          368 EVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      +.||+|+||.||++....                     ....+..|+++|++++||||+++++++...+..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            579999999999875411                     12346689999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +|+|.+++.+.  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ...
T Consensus        82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~  155 (318)
T cd05582          82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKA  155 (318)
T ss_pred             CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Cce
Confidence            99999998654  358999999999999999999998   899999999999999999999999999997654332 223


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ....||+.|+|||.+.+..++.++|||||||+++||++|+.||.......  ...... ...      ..    .+....
T Consensus       156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~i~-~~~------~~----~p~~~~  222 (318)
T cd05582         156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE--TMTMIL-KAK------LG----MPQFLS  222 (318)
T ss_pred             ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH--HHHHHH-cCC------CC----CCCCCC
Confidence            34579999999999998889999999999999999999999997643211  111111 110      01    111223


Q ss_pred             HHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 035655          587 ELVLQLGLLCSHQKAEARPT-----MRQVLRY  613 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  613 (670)
                      ..+.+++..||+.||.+||+     +++++++
T Consensus       223 ~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~  254 (318)
T cd05582         223 PEAQSLLRALFKRNPANRLGAGPDGVEEIKRH  254 (318)
T ss_pred             HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence            45678899999999999999     5556544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.1e-34  Score=296.86  Aligned_cols=225  Identities=26%  Similarity=0.431  Sum_probs=178.7

Q ss_pred             ceEeeeCceeEEEeeccc----------------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          368 EVIGTGGFGEVYKGVLPT----------------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~----------------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      +.||+|+||.||+|+...                            ....|.+|+.+++.++||||++++++|..+...+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999997421                            1236778999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc-------EEEEee
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN-------ARLGDF  492 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~-------~kL~DF  492 (670)
                      +|+||+++|+|+.++.... ..+++..+++++.||++||+|||+   ++|+||||||+|||++.++.       +|++||
T Consensus        81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~  156 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDP  156 (262)
T ss_pred             EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence            9999999999999986543 358999999999999999999998   89999999999999987664       899999


Q ss_pred             cCceeccCCCcceeeccccCcCCCCccccc-cCCCCccchhHHHHHHHHHHH-hCCCCCCCCcchhHHHHHHHhhcCCcc
Q 035655          493 GLARLFDHGKISHTTNVVGTIGYIAPELAR-TGKASCSTDVFAYGVLLLEIA-TGRRPIDSDHFILVDWVLEFQHLGQVL  570 (670)
Q Consensus       493 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~el~-tG~~pf~~~~~~~~~~~~~~~~~~~~~  570 (670)
                      |++......     ....++..|+|||++. +..++.++|||||||++|||+ .|+.|+..........   .... . .
T Consensus       157 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~---~~~~-~-~  226 (262)
T cd05077         157 GIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER---FYEG-Q-C  226 (262)
T ss_pred             CCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH---HHhc-C-c
Confidence            998654321     2345788999999886 466899999999999999998 4888876532211111   1110 0 0


Q ss_pred             cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       571 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...     ..    ....+.+++..||+.||.+||++.++++.++
T Consensus       227 ~~~-----~~----~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         227 MLV-----TP----SCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             cCC-----CC----ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            011     11    1245788999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=8.8e-35  Score=302.32  Aligned_cols=236  Identities=23%  Similarity=0.337  Sum_probs=186.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..++||+|+||.||+|....                 ..++|.+|++++++++||||++++++|...+..++|+||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            357788999999999999997532                 235688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|..+.      .+++..+..++.|++.||.|||+   .+|+|+||||+|||++.++.+||+|||++......   
T Consensus        81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---  148 (279)
T cd06619          81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---  148 (279)
T ss_pred             CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---
Confidence            9999997653      46888899999999999999998   99999999999999999999999999999765432   


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch--hHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI--LVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                      ......||..|+|||++.+..++.++|||||||+++||++|+.||......  ...........   .....+.+.   .
T Consensus       149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~  222 (279)
T cd06619         149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCI---VDEDPPVLP---V  222 (279)
T ss_pred             cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHH---hccCCCCCC---C
Confidence            223457899999999999889999999999999999999999999642110  00000000000   000111111   1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ......+.+++.+|++.+|.+||+++|++++..
T Consensus       223 ~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~  255 (279)
T cd06619         223 GQFSEKFVHFITQCMRKQPKERPAPENLMDHPF  255 (279)
T ss_pred             CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence            112345788999999999999999999998643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=7e-35  Score=302.79  Aligned_cols=241  Identities=23%  Similarity=0.345  Sum_probs=193.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeec-cCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR-KRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-~~~~  418 (670)
                      .++|+..+.||+|+||.||+|....                     ..+.+.+|+.++++++||||+++++++.. +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            5678889999999999999997643                     13557899999999999999999998876 4678


Q ss_pred             EEEEeccCCCCchhhcccCCc------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          419 LLVYDYIPNGSLDSLLFDNEN------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                      ++++||+++++|.+++.....      ..+++.+++.++.|++.||+|||+   .+++||||||+||++++++.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCC
Confidence            999999999999999865422      468999999999999999999998   89999999999999999999999999


Q ss_pred             cCceeccCCCcce-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcc
Q 035655          493 GLARLFDHGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVL  570 (670)
Q Consensus       493 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~  570 (670)
                      |+++.+....... .....++..|+|||++.+..++.++|||||||+++|+++ |+.||......  ++.........  
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~--  237 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--EMAAYLKDGYR--  237 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--HHHHHHHcCCC--
Confidence            9998654432211 122356778999999988889999999999999999999 99999753321  11111111110  


Q ss_pred             cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       571 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                          ...    .......+.+++.+||+.+|++||++.++++.|+.
T Consensus       238 ----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  275 (280)
T cd05043         238 ----LAQ----PINCPDELFAVMACCWALDPEERPSFSQLVQCLTD  275 (280)
T ss_pred             ----CCC----CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence                011    11123567899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=6.8e-35  Score=322.85  Aligned_cols=250  Identities=20%  Similarity=0.294  Sum_probs=185.0

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch------------HHHHHHHHHHHhccccCceeeeeeeeecc--------CeeE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRLRHKHLVNLQGWCKRK--------RDLL  419 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--------~~~~  419 (670)
                      ..++|+..+.||+|+||.||+|.....            .....+|+.+|++++||||+++++++...        ..++
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~  143 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN  143 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence            346799999999999999999986431            23345799999999999999999876432        2467


Q ss_pred             EEEeccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCce
Q 035655          420 LVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLAR  496 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~  496 (670)
                      +||||+++ +|.+++..  .....+++..+..++.||+.||+|||+   .+|+||||||+|||++.++ .+||+|||+++
T Consensus       144 lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFGla~  219 (440)
T PTZ00036        144 VVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFGSAK  219 (440)
T ss_pred             EEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence            99999974 77776643  233568999999999999999999999   8999999999999999765 69999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc--------
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL--------  566 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~--------  566 (670)
                      ......  ......||+.|+|||++.+. .++.++|||||||+++||++|+.||...... ...........        
T Consensus       220 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~  297 (440)
T PTZ00036        220 NLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE  297 (440)
T ss_pred             hccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            664432  22335789999999988654 6899999999999999999999999763221 11111100000        


Q ss_pred             --CCcccccCC-----CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          567 --GQVLDVVDP-----NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       567 --~~~~~~~d~-----~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                        ....+..-+     .+...++......+.+++..||+.||.+||++.|+++|-.
T Consensus       298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~  353 (440)
T PTZ00036        298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF  353 (440)
T ss_pred             hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence              000000001     1111122223457889999999999999999999998754

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.2e-34  Score=307.82  Aligned_cols=227  Identities=25%  Similarity=0.295  Sum_probs=178.0

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHH-HHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIE-SLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~-~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||+++...                   ....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999997643                   1123444544 67889999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|..++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~  154 (321)
T cd05603          81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTS  154 (321)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Cccc
Confidence            9999888653  358889999999999999999998   899999999999999999999999999987532221 2233


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||.+.+..++.++|||||||++|||++|+.||...+....  ..... ...      .    ..+.....
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~i~-~~~------~----~~~~~~~~  221 (321)
T cd05603         155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM--YDNIL-HKP------L----QLPGGKTV  221 (321)
T ss_pred             cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH--HHHHh-cCC------C----CCCCCCCH
Confidence            45799999999999988999999999999999999999999976432111  11111 110      0    11112235


Q ss_pred             HHHHHHHhhccCCCCCCCCHH----HHHHH
Q 035655          588 LVLQLGLLCSHQKAEARPTMR----QVLRY  613 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~----evl~~  613 (670)
                      .+.+++.+|++.+|.+||+..    +++++
T Consensus       222 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  251 (321)
T cd05603         222 AACDLLVGLLHKDQRRRLGAKADFLEIKNH  251 (321)
T ss_pred             HHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence            678899999999999998753    55543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.4e-34  Score=305.53  Aligned_cols=248  Identities=22%  Similarity=0.314  Sum_probs=188.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|...++||+|+||.||+|+...                 ....+.+|++++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            568889999999999999997642                 123577899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++ +|.+++.... ..+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++....... 
T Consensus        86 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-  159 (309)
T cd07872          86 LDK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-  159 (309)
T ss_pred             CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCcc-
Confidence            975 8888876543 358999999999999999999998   8999999999999999999999999999976543221 


Q ss_pred             eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhh------------cCCcc
Q 035655          505 HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQH------------LGQVL  570 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~------------~~~~~  570 (670)
                      ......+|+.|+|||.+.+ ..++.++|||||||+++||++|+.||...... ..........            .....
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (309)
T cd07872         160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK  239 (309)
T ss_pred             ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence            1223467899999998865 46889999999999999999999999763321 1100000000            00000


Q ss_pred             cccCCCCCC----cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          571 DVVDPNLGS----SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       571 ~~~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..-.+....    .........+.+++..|++.||.+|||++|++++-.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~  288 (309)
T cd07872         240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY  288 (309)
T ss_pred             hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence            000000000    000112345678999999999999999999998654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=1.4e-34  Score=295.62  Aligned_cols=238  Identities=26%  Similarity=0.408  Sum_probs=194.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..+.||+|+||.||++....              ..+++.+|++++++++||||+++++++......++++||++
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   81 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG   81 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence            3678889999999999999998753              24678899999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.... ..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++........ ..
T Consensus        82 ~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~  156 (256)
T cd06612          82 AGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-KR  156 (256)
T ss_pred             CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-cc
Confidence            999999986543 468999999999999999999998   8999999999999999999999999999986654321 22


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ....++..|+|||++.+..++.++||||||++++||++|+.||..........    .    ......+.+  ..+....
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~----~----~~~~~~~~~--~~~~~~~  226 (256)
T cd06612         157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF----M----IPNKPPPTL--SDPEKWS  226 (256)
T ss_pred             ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh----h----hccCCCCCC--CchhhcC
Confidence            33468899999999998899999999999999999999999997532211000    0    000001111  1122233


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..+.+++..||+.+|.+||++.|++++
T Consensus       227 ~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         227 PEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             HHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence            567889999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=2.1e-34  Score=295.06  Aligned_cols=233  Identities=27%  Similarity=0.400  Sum_probs=188.3

Q ss_pred             ceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++||+|++|.||+|.+..                    ..+.|.+|+.++++++||||+++++.+.. ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999997532                    23568899999999999999999999988 889999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc--e
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS--H  505 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~--~  505 (670)
                      ++|.+++.+.....++|..++.++.|++.||+|||+   ++++||||||+||+++.++.+||+|||+++........  .
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  156 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM  156 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence            999999977543568999999999999999999998   89999999999999999999999999999876543221  1


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      .....++..|+|||++.+..++.++|||||||+++||++ |+.||......  +...........       .  ..+..
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~-------~--~~~~~  225 (257)
T cd05040         157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDKEGER-------L--ERPEA  225 (257)
T ss_pred             ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHhcCCc-------C--CCCcc
Confidence            123457789999999998899999999999999999998 99999653221  111111111110       0  01112


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .+..+.+++.+|++.+|.+||++.++++.|.
T Consensus       226 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         226 CPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            3356888999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.4e-34  Score=303.81  Aligned_cols=238  Identities=23%  Similarity=0.354  Sum_probs=192.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|+..+.||+|+||.||+|+...                ....+.+|+.+++.++||||+++++.+......++||||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            3578889999999999999997532                235678999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.+   ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++........ 
T Consensus        99 ~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-  171 (296)
T cd06654          99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-  171 (296)
T ss_pred             cCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccccc-
Confidence            999999999854   258999999999999999999998   8999999999999999999999999999876543221 


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ......+++.|+|||.+.+..++.++|||||||+++||++|+.||....... .+. .......      +.+  ..+..
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-~~~-~~~~~~~------~~~--~~~~~  241 (296)
T cd06654         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALY-LIATNGT------PEL--QNPEK  241 (296)
T ss_pred             ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-hHH-HHhcCCC------CCC--CCccc
Confidence            1233468899999999988889999999999999999999999997643211 111 1111110      111  11222


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ....+.+++.+||+.+|.+||++.+++++-.
T Consensus       242 ~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~  272 (296)
T cd06654         242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQF  272 (296)
T ss_pred             cCHHHHHHHHHHCcCCcccCcCHHHHhhChh
Confidence            3356788999999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.1e-36  Score=290.53  Aligned_cols=239  Identities=25%  Similarity=0.368  Sum_probs=194.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccchH------------------------HHHHHHHHHHhcc-ccCceeeeeeeeec
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTRM------------------------REFAAEIESLGRL-RHKHLVNLQGWCKR  414 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~~------------------------~~f~~Ei~~L~~l-~H~nIv~l~g~~~~  414 (670)
                      .-+.|...+.||.|..+.|-+++.+.+.                        ++-.+|+.+|+++ .||+|+.+.+.++.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            3456778888999998888877664421                        2334799999998 59999999999999


Q ss_pred             cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                      +.-.++|+|.|+.|.|.+||...  -.++++...+|++|+.+|+.|||.   ..||||||||+|||+|++.++||+|||+
T Consensus        95 ~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGF  169 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGF  169 (411)
T ss_pred             cchhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccce
Confidence            99999999999999999999654  469999999999999999999999   9999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCcccccc------CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELART------GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ  568 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~  568 (670)
                      +.....+.  .....+||++|+|||.+..      ..|+...|+|++|+++|-|+.|..||-....   -........++
T Consensus       170 a~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ---mlMLR~ImeGk  244 (411)
T KOG0599|consen  170 ACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ---MLMLRMIMEGK  244 (411)
T ss_pred             eeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH---HHHHHHHHhcc
Confidence            99887654  4567899999999998753      3578899999999999999999999853111   11112222222


Q ss_pred             cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       569 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .      ....+-..+......+|+.+|++.||.+|-|.+|+++|-
T Consensus       245 y------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp  284 (411)
T KOG0599|consen  245 Y------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHP  284 (411)
T ss_pred             c------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence            2      122333445567788999999999999999999999864

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=7.1e-35  Score=303.70  Aligned_cols=242  Identities=25%  Similarity=0.399  Sum_probs=189.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeecc--Cee
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDL  418 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~  418 (670)
                      +.|++.+.||+|+||.||++....                     ....+.+|++++++++||||+++.+++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            457888999999999999886310                     235688999999999999999999998775  568


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++||||+++++|.+++.+.. ..++|.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++..
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcccccc
Confidence            99999999999999996543 358999999999999999999998   99999999999999999999999999999866


Q ss_pred             cCCCcc--eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchh------------HHHHHHHh
Q 035655          499 DHGKIS--HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL------------VDWVLEFQ  564 (670)
Q Consensus       499 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~------------~~~~~~~~  564 (670)
                      ......  ......++..|+|||++.+..++.++|||||||+++||++++.|........            ........
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05079         160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL  239 (284)
T ss_pred             ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence            543221  1223456778999999988889999999999999999999887653211000            00000001


Q ss_pred             hcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       565 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+..         ...+......+.+++.+||+.+|.+||+++++++.|+.
T Consensus       240 ~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         240 EEGKR---------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             HcCcc---------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence            11110         01112234678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.6e-34  Score=307.90  Aligned_cols=230  Identities=25%  Similarity=0.308  Sum_probs=182.6

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||+||++....                   ..+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            469999999999997643                   123467899999888 699999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|..++...  ..+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~  154 (327)
T cd05617          81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTS  154 (327)
T ss_pred             CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Ccee
Confidence            9999988654  359999999999999999999999   899999999999999999999999999987532211 2233


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC----cchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD----HFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~----~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      ...||+.|+|||++.+..++.++|||||||+++||++|+.||...    .....++.........      ..+    +.
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------~~~----p~  224 (327)
T cd05617         155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP------IRI----PR  224 (327)
T ss_pred             cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC------CCC----CC
Confidence            457999999999999999999999999999999999999999641    1112222222221111      111    11


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCC------HHHHHHH
Q 035655          584 AEMELVLQLGLLCSHQKAEARPT------MRQVLRY  613 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs------~~evl~~  613 (670)
                      .....+.+++..||+.||.+||+      ++++++|
T Consensus       225 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         225 FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence            12245678889999999999998      4677765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.2e-34  Score=299.33  Aligned_cols=238  Identities=25%  Similarity=0.397  Sum_probs=190.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ++|...++||+|+||.||+|....                    ..+.|.+|+.++++++||||++++++|.+ ...++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            457788999999999999987421                    23468899999999999999999999875 457899


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++.... ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.....
T Consensus        85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            99999999999996643 358999999999999999999998   89999999999999999999999999999876544


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .........++..|+|||.+....++.++||||||++++|+++ |+.||.......  ...... .+...     ..   
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~-~~~~~-----~~---  229 (270)
T cd05056         161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIE-NGERL-----PM---  229 (270)
T ss_pred             cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHH-cCCcC-----CC---
Confidence            3222223345578999999988889999999999999999986 999997643211  111111 11100     11   


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       +......+.+++.+|+..+|.+||++.++++.|++
T Consensus       230 -~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~  264 (270)
T cd05056         230 -PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD  264 (270)
T ss_pred             -CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence             11223567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=9.6e-35  Score=302.72  Aligned_cols=239  Identities=23%  Similarity=0.341  Sum_probs=192.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..+.||+|+||+||++....                 ..+.+.+|+++++.++||||+++++.+...+.+++|+||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            467888999999999999987642                 235788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.+.  ..+++..+..++.+++.+|.|||+  ..+++||||||+||+++.++.++|+|||++.......  
T Consensus        85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--  158 (284)
T cd06620          85 MDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--  158 (284)
T ss_pred             CCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--
Confidence            9999999998654  358999999999999999999997  2589999999999999999999999999987543321  


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch---------hHHHHHHHhhcCCcccccCC
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI---------LVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~---------~~~~~~~~~~~~~~~~~~d~  575 (670)
                       .....|+..|+|||++.+..++.++|||||||+++|+++|+.||......         ..++......      ...+
T Consensus       159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  231 (284)
T cd06620         159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ------EPPP  231 (284)
T ss_pred             -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh------ccCC
Confidence             22357899999999998888999999999999999999999999753221         1111111110      0011


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+..   ......+.+++.+|+++||.+||++.|++++..-
T Consensus       232 ~~~~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         232 RLPS---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             CCCc---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence            1111   1133567889999999999999999999987543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=9.8e-35  Score=310.23  Aligned_cols=242  Identities=26%  Similarity=0.396  Sum_probs=192.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKR  416 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~  416 (670)
                      .+|.+.+.||+|+||.||++....                        ..+++.+|+++++++ +||||++++++|...+
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            457889999999999999885310                        235688999999999 7999999999999999


Q ss_pred             eeEEEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID  482 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld  482 (670)
                      ..++++||+++|+|.+++....              ...++|.+++.++.|++.||+|||+   .+++||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEc
Confidence            9999999999999999986532              2358899999999999999999998   8999999999999999


Q ss_pred             CCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHH
Q 035655          483 ADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWV  560 (670)
Q Consensus       483 ~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~  560 (670)
                      .++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||+++||++ |..||.....  .+..
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~  246 (334)
T cd05100         169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--EELF  246 (334)
T ss_pred             CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH--HHHH
Confidence            9999999999999865442211 1122344568999999999899999999999999999998 8888865332  1111


Q ss_pred             HHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       561 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      .... .....         ..+......+.+++..||+.+|.+||++.|+++.|+...
T Consensus       247 ~~~~-~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         247 KLLK-EGHRM---------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             HHHH-cCCCC---------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence            1111 11100         111122356788999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.1e-35  Score=302.11  Aligned_cols=246  Identities=23%  Similarity=0.332  Sum_probs=189.2

Q ss_pred             cCccccceEeeeCceeEEEeeccchHHH------------HHHHHHHHhccccCceeeeeeeeeccC-----eeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTRMRE------------FAAEIESLGRLRHKHLVNLQGWCKRKR-----DLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~~~~------------f~~Ei~~L~~l~H~nIv~l~g~~~~~~-----~~~lV~E~  424 (670)
                      -.|...+++|+|.||.||+|......+.            =-+|+++|+++.|||||+|+-+|....     .+.+||||
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVley  103 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEY  103 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHh
Confidence            3567789999999999999988664222            228999999999999999999886432     45799999


Q ss_pred             cCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-CcEEEEeecCceeccCC
Q 035655          425 IPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDHG  501 (670)
Q Consensus       425 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-~~~kL~DFGla~~~~~~  501 (670)
                      ||. +|.++++..  .+..++...+.-+..||++||+|||+   .+|+||||||.|+|+|.+ |.+||||||.|+....+
T Consensus       104 mP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~  179 (364)
T KOG0658|consen  104 MPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG  179 (364)
T ss_pred             chH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence            986 898888642  23467888888899999999999999   999999999999999977 89999999999988776


Q ss_pred             CcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch--hHHHHHHHh---------hcCCc
Q 035655          502 KISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI--LVDWVLEFQ---------HLGQV  569 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--~~~~~~~~~---------~~~~~  569 (670)
                      ...  ....-|..|.|||.+.+. .|+.+.||||.|||+.||+-|+..|.++...  +...+..+.         .....
T Consensus       180 epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y  257 (364)
T KOG0658|consen  180 EPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNY  257 (364)
T ss_pred             CCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccc
Confidence            544  233557899999988875 6999999999999999999999999874321  221111111         01111


Q ss_pred             ccccCCCCCCc-----ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 LDVVDPNLGSS-----YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .+...|.+...     +......+.++++.++++.+|.+|.++.|++++
T Consensus       258 ~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  258 TEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             ccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence            12222333221     223345678899999999999999999999986

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1e-34  Score=298.15  Aligned_cols=233  Identities=26%  Similarity=0.416  Sum_probs=181.2

Q ss_pred             ceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeee-ccCeeEEEEeccC
Q 035655          368 EVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCK-RKRDLLLVYDYIP  426 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~-~~~~~~lV~E~~~  426 (670)
                      +.||+|+||.||+|....                    ..+.+.+|+.+++.++||||++++++|. .++..++|+||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999987421                    1346778999999999999999999876 4556899999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc---
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI---  503 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~---  503 (670)
                      +|+|.+++.+.. ..+++..++.++.|++.||+|||+   .+++||||||+|||+++++.+||+|||+++.......   
T Consensus        81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~  156 (262)
T cd05058          81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV  156 (262)
T ss_pred             CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence            999999997543 346888889999999999999998   8999999999999999999999999999975543221   


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhC-CCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATG-RRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG-~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                      .......++..|+|||.+.+..++.++|||||||+++||++| ..||.....  .+....... +.     .+..    +
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~-~~-----~~~~----~  224 (262)
T cd05058         157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYLLQ-GR-----RLLQ----P  224 (262)
T ss_pred             cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHhc-CC-----CCCC----C
Confidence            111233567789999999888999999999999999999995 556654221  111111111 10     0110    1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+..+.+++..||+++|++||++.++++.|+.
T Consensus       225 ~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~  258 (262)
T cd05058         225 EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ  258 (262)
T ss_pred             CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            1123567899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=2.5e-34  Score=306.88  Aligned_cols=241  Identities=23%  Similarity=0.302  Sum_probs=187.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||+++...                   ....+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            478899999999999999997643                   1234678999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++.+.. ..+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus        81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  156 (331)
T cd05624          81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG  156 (331)
T ss_pred             eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence            9999999999997643 368999999999999999999998   999999999999999999999999999998765443


Q ss_pred             cceeeccccCcCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          503 ISHTTNVVGTIGYIAPELART-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ........||+.|+|||++.+     +.++.++|||||||++|||++|+.||......  +............. ..+..
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~~~~i~~~~~~~~-~p~~~  233 (331)
T cd05624         157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKIMNHEERFQ-FPSHI  233 (331)
T ss_pred             ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH--HHHHHHHcCCCccc-CCCcc
Confidence            333344579999999998875     56788999999999999999999999764321  11111111110000 11111


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHh
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEA--RPTMRQVLRYL  614 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L  614 (670)
                           ....+.+.+++..|++.++++  |++++++++|.
T Consensus       234 -----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~  267 (331)
T cd05624         234 -----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHA  267 (331)
T ss_pred             -----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence                 112345667777777765543  57899998874

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-34  Score=316.49  Aligned_cols=248  Identities=24%  Similarity=0.254  Sum_probs=189.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      .+|.+.+.||+|+||.||++...+             ..+.+.+|+++|++++||||+++++++......++|||++. +
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~  170 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-C  170 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-C
Confidence            468889999999999999986432             12355789999999999999999999999999999999995 6


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc-ceee
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-SHTT  507 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~-~~~~  507 (670)
                      +|.+++..  ...+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....... ....
T Consensus       171 ~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~  245 (392)
T PHA03207        171 DLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCY  245 (392)
T ss_pred             CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccccccccc
Confidence            88888843  3469999999999999999999998   8999999999999999999999999999976544322 2223


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-----hHHHHHHHhhc----------------
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-----LVDWVLEFQHL----------------  566 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-----~~~~~~~~~~~----------------  566 (670)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||......     +..........                
T Consensus       246 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  325 (392)
T PHA03207        246 GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHF  325 (392)
T ss_pred             ccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHH
Confidence            457999999999999999999999999999999999999999653211     11100000000                


Q ss_pred             CCcccccCCCCC-Ccc--cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          567 GQVLDVVDPNLG-SSY--VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       567 ~~~~~~~d~~l~-~~~--~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ........+... ...  .......+.+++..||+.||.+||++.|++++-.
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~  377 (392)
T PHA03207        326 KQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL  377 (392)
T ss_pred             HhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence            000000000000 000  0011245677889999999999999999998743

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=3.5e-34  Score=298.06  Aligned_cols=237  Identities=25%  Similarity=0.383  Sum_probs=188.0

Q ss_pred             ccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      |+..+.||+|+||.||+|....                ..+.+.+|+++++.++||||++++++|...+..++|+||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            5667889999999999997643                235688999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|..++.+.. ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....... ....
T Consensus        87 ~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~  161 (282)
T cd06643          87 GAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRD  161 (282)
T ss_pred             CcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccc-cccc
Confidence            99999886533 468999999999999999999998   899999999999999999999999999987543321 1223


Q ss_pred             ccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          508 NVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                      ...++..|+|||++.     +..++.++|||||||++|||++|+.||......  ......... .     .+.+  ..+
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~-~-----~~~~--~~~  231 (282)
T cd06643         162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--RVLLKIAKS-E-----PPTL--AQP  231 (282)
T ss_pred             cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--HHHHHHhhc-C-----CCCC--CCc
Confidence            356899999999874     345788999999999999999999999753311  111111111 0     0111  011


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ......+.+++..||+.+|.+||++.+++++-.
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  264 (282)
T cd06643         232 SRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF  264 (282)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence            122356788999999999999999999998644

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=2.2e-34  Score=304.28  Aligned_cols=235  Identities=26%  Similarity=0.349  Sum_probs=190.2

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ..++|+....||+|+||.||+++-++                   ..+.+.+|-.+|....+|+||+|+-.|++.+.+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            56789999999999999999998654                   33556789999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||++||++..+|...  ..|++.....++.+++.|+.-||+   .|+|||||||+|+|||..|.+||+||||+.-...
T Consensus       219 iMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~  293 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK  293 (550)
T ss_pred             EEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhhh
Confidence            99999999999999665  469999999999999999999999   9999999999999999999999999999853321


Q ss_pred             C----------------------Ccc-----ee-------------------eccccCcCCCCccccccCCCCccchhHH
Q 035655          501 G----------------------KIS-----HT-------------------TNVVGTIGYIAPELARTGKASCSTDVFA  534 (670)
Q Consensus       501 ~----------------------~~~-----~~-------------------~~~~gt~~y~aPE~~~~~~~t~ksDV~S  534 (670)
                      .                      ...     ..                   ...+|||.|||||++.+..|+..+|.||
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS  373 (550)
T KOG0605|consen  294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS  373 (550)
T ss_pred             hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence            0                      000     00                   1147999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCcch-----hHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCC---C
Q 035655          535 YGVLLLEIATGRRPIDSDHFI-----LVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARP---T  606 (670)
Q Consensus       535 ~Gvvl~el~tG~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s  606 (670)
                      +|||+|||+.|.+||..+...     +..|...+...      .+.        ....+..+|+.+|+. ||.+|-   .
T Consensus       374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP------~~~--------~~s~eA~DLI~rll~-d~~~RLG~~G  438 (550)
T KOG0605|consen  374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFP------EEV--------DLSDEAKDLITRLLC-DPENRLGSKG  438 (550)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCC------CcC--------cccHHHHHHHHHHhc-CHHHhcCccc
Confidence            999999999999999875432     22232111110      011        112556788888888 999996   4


Q ss_pred             HHHHHHHh
Q 035655          607 MRQVLRYL  614 (670)
Q Consensus       607 ~~evl~~L  614 (670)
                      ++||-+|-
T Consensus       439 ~~EIK~HP  446 (550)
T KOG0605|consen  439 AEEIKKHP  446 (550)
T ss_pred             HHHHhcCC
Confidence            77777653

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-36  Score=286.58  Aligned_cols=238  Identities=24%  Similarity=0.306  Sum_probs=194.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      +++|+..+.||+|.|+.||++....                  +.+++.+|+++-+.|+||||++|..-..+.+..++|+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            5678888999999999999987654                  3345668999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC---CcEEEEeecCceecc
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---MNARLGDFGLARLFD  499 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~---~~~kL~DFGla~~~~  499 (670)
                      |+|.|++|..-|-.+  ..+++..+-..+.||+++|.|+|.   ++|||||+||+|+||-+.   --+||+|||+|....
T Consensus        90 e~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~  164 (355)
T KOG0033|consen   90 DLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN  164 (355)
T ss_pred             ecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence            999999997666443  467888888999999999999999   999999999999999543   358999999999877


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                        ........+||++|||||+++..+|+..+|||+.|+||+-|+.|+.||.++... +-+    ....+.      -...
T Consensus       165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye----~I~~g~------yd~~  232 (355)
T KOG0033|consen  165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYE----QIKAGA------YDYP  232 (355)
T ss_pred             --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHH----HHhccc------cCCC
Confidence              334556679999999999999999999999999999999999999999864322 111    111111      1122


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +.+.....+...+|+.+|+..||.+|.|+.|.++|-+
T Consensus       233 ~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW  269 (355)
T KOG0033|consen  233 SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW  269 (355)
T ss_pred             CcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence            2233344566778899999999999999999998755

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.3e-34  Score=297.45  Aligned_cols=225  Identities=25%  Similarity=0.412  Sum_probs=178.8

Q ss_pred             ceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          368 EVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +.||+|+||.||+|....                       ..+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            468999999999996521                       124577899999999999999999999998999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc--------EEEEeecCce
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN--------ARLGDFGLAR  496 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~--------~kL~DFGla~  496 (670)
                      +++|+|.+++..+.. .+++..+++++.||+.||+|||+   ++|+||||||+||+++.++.        +|++|||++.
T Consensus        81 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~  156 (258)
T cd05078          81 VKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI  156 (258)
T ss_pred             CCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence            999999999976543 68999999999999999999998   99999999999999987765        6999999886


Q ss_pred             eccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCC-CCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGR-RPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~-~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ....     .....++..|+|||++.+. .++.++|||||||++|||++|. .|+........  .. ....  .     
T Consensus       157 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~--~~-~~~~--~-----  221 (258)
T cd05078         157 TVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK--LQ-FYED--R-----  221 (258)
T ss_pred             ccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH--HH-HHHc--c-----
Confidence            5432     2234678899999998864 5789999999999999999985 55543221111  10 1110  0     


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..+    +......+.+++..||+.+|.+||+++++++.|+
T Consensus       222 ~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         222 HQL----PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             ccC----CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            111    1112245788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.7e-34  Score=299.63  Aligned_cols=224  Identities=23%  Similarity=0.359  Sum_probs=177.2

Q ss_pred             eEeeeCceeEEEeeccc----------------------------------------hHHHHHHHHHHHhccccCceeee
Q 035655          369 VIGTGGFGEVYKGVLPT----------------------------------------RMREFAAEIESLGRLRHKHLVNL  408 (670)
Q Consensus       369 ~lG~G~fg~Vykg~~~~----------------------------------------~~~~f~~Ei~~L~~l~H~nIv~l  408 (670)
                      .||+|+||.||+|....                                        ...+|.+|+.++++++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999999987411                                        12467789999999999999999


Q ss_pred             eeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC---
Q 035655          409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM---  485 (670)
Q Consensus       409 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~---  485 (670)
                      +++|.+....++||||+++|+|+.++.+.. ..+++..+..++.|+++||+|||+   ++|+||||||+|||++..+   
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~  157 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAE  157 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCccc
Confidence            999999999999999999999999986543 368999999999999999999998   8999999999999997654   


Q ss_pred             ----cEEEEeecCceeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHH-hCCCCCCCCcchhHHH
Q 035655          486 ----NARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIA-TGRRPIDSDHFILVDW  559 (670)
Q Consensus       486 ----~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~-tG~~pf~~~~~~~~~~  559 (670)
                          .+|++|||++......     ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||..........
T Consensus       158 ~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~  232 (274)
T cd05076         158 GTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER  232 (274)
T ss_pred             CccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence                3899999988643221     12357788999998865 56899999999999999995 6999987533221111


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..  ...        ......    ....+.+++..||+.+|.+||++.++++.|.
T Consensus       233 ~~--~~~--------~~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         233 FY--EKK--------HRLPEP----SCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HH--Hhc--------cCCCCC----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            10  100        011111    1235788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.9e-34  Score=294.61  Aligned_cols=236  Identities=30%  Similarity=0.488  Sum_probs=191.0

Q ss_pred             ccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      |+..+.||+|+||.||++....                     ..+.+..|+..+++++|+||+++++++.+.+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            3567899999999999987653                     2457889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++.......+++.++..++.|++.||+|||+   .+++||||||+||++++++.++|+|||++.......
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  157 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD  157 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence            99999999999976544348999999999999999999998   899999999999999999999999999998766543


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ........++..|+|||.+.+..++.++||||+|++++||++ |+.||......  ...... ......         ..
T Consensus       158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--~~~~~~-~~~~~~---------~~  225 (258)
T smart00219      158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--EVLEYL-KKGYRL---------PK  225 (258)
T ss_pred             ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-hcCCCC---------CC
Confidence            222222347789999999988889999999999999999998 78888653211  111111 111111         11


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      +......+.+++.+|++.+|.+||++.|+++.|
T Consensus       226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      226 PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            111345678899999999999999999999864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-34  Score=299.33  Aligned_cols=234  Identities=26%  Similarity=0.437  Sum_probs=192.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..+.||.|++|.||+|....                 ....+.+|+++++.++|+||+++.+++.++...++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            367788999999999999997643                 235678999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++...   .+++..+..++.|++.||.|||+   .+++||||+|+||++++++.++|+|||+++...... .
T Consensus        81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~  153 (274)
T cd06609          81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-S  153 (274)
T ss_pred             eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc-c
Confidence            9999999998654   68999999999999999999998   899999999999999999999999999998775432 2


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ......++..|+|||++.+..++.++||||||+++|||++|+.||.......  ......      ....+.+...   .
T Consensus       154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~------~~~~~~~~~~---~  222 (274)
T cd06609         154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIP------KNNPPSLEGN---K  222 (274)
T ss_pred             ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhh------hcCCCCCccc---c
Confidence            2334578889999999998889999999999999999999999997543211  111111      1111121111   0


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+++..||+.+|.+||++++++++
T Consensus       223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         223 FSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             cCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            33457788999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=2.5e-34  Score=299.07  Aligned_cols=245  Identities=28%  Similarity=0.328  Sum_probs=186.7

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|++|.||+|....                  ..+.+.+|+.++++++||||+++++++.+++..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            47788999999999999997642                  124678999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCC-ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          425 IPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       425 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      ++ ++|.+++.... ...+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....... 
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-  155 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-  155 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence            97 68988886533 2568999999999999999999998   899999999999999999999999999997654322 


Q ss_pred             ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCc-------------
Q 035655          504 SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV-------------  569 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~-------------  569 (670)
                      .......+++.|+|||++.+. .++.++|||||||+++||++|+.||.........+.. ....+..             
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  234 (285)
T cd07861         156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRI-FRILGTPTEDVWPGVTSLPD  234 (285)
T ss_pred             ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHHhCCCChhhhhcchhhHH
Confidence            122334678899999987654 5789999999999999999999999764322111100 0000000             


Q ss_pred             -ccccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 -LDVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 -~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                       ....+....   ..........+.+++.+||+.||.+||++.+++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence             000000000   00011123566789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.6e-34  Score=300.46  Aligned_cols=247  Identities=26%  Similarity=0.399  Sum_probs=195.4

Q ss_pred             cchhhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc-ccCceeeeeeeeec-
Q 035655          352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL-RHKHLVNLQGWCKR-  414 (670)
Q Consensus       352 ~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~-  414 (670)
                      .++.++..+...|+..+.||+|+||.||+|....               ...++..|+.+++++ +||||+++++++.. 
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            4667777788999999999999999999988643               235678899999998 69999999999853 


Q ss_pred             -----cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEE
Q 035655          415 -----KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL  489 (670)
Q Consensus       415 -----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL  489 (670)
                           ....+++|||+++|+|.+++.......+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~l  162 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKL  162 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEE
Confidence                 4578999999999999999976555568899999999999999999998   89999999999999999999999


Q ss_pred             EeecCceeccCCCcceeeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHh
Q 035655          490 GDFGLARLFDHGKISHTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ  564 (670)
Q Consensus       490 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~  564 (670)
                      +|||++....... .......|+..|+|||.+.     ...++.++|||||||+++||++|+.||..........  .  
T Consensus       163 ~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~--~--  237 (282)
T cd06636         163 VDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF--L--  237 (282)
T ss_pred             eeCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh--h--
Confidence            9999987553321 1223356899999999875     3467889999999999999999999996532111000  0  


Q ss_pred             hcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       565 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                          ......+...   .......+.+++..||+.||.+||++.|++++
T Consensus       238 ----~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         238 ----IPRNPPPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             ----HhhCCCCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence                0011111111   11233568889999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.3e-34  Score=307.99  Aligned_cols=227  Identities=25%  Similarity=0.283  Sum_probs=178.8

Q ss_pred             ceEeeeCceeEEEeeccch-------------------HHHHHHHHH-HHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPTR-------------------MREFAAEIE-SLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~-~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||+||++.....                   .+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4699999999999987431                   123344444 56789999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~  154 (323)
T cd05575          81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KTTS  154 (323)
T ss_pred             CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-Cccc
Confidence            9999998654  368999999999999999999998   899999999999999999999999999987532221 2233


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||+++||++|+.||......  +...... ...      ..+...    ...
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~i~-~~~------~~~~~~----~~~  221 (323)
T cd05575         155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA--EMYDNIL-NKP------LRLKPN----ISV  221 (323)
T ss_pred             cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH--HHHHHHH-cCC------CCCCCC----CCH
Confidence            457999999999999999999999999999999999999999764321  1111111 110      111111    235


Q ss_pred             HHHHHHHhhccCCCCCCCCHH----HHHHH
Q 035655          588 LVLQLGLLCSHQKAEARPTMR----QVLRY  613 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~----evl~~  613 (670)
                      .+.+++..|++.||.+||+++    +++++
T Consensus       222 ~~~~li~~~l~~~p~~R~~~~~~~~~il~~  251 (323)
T cd05575         222 SARHLLEGLLQKDRTKRLGAKDDFLEIKNH  251 (323)
T ss_pred             HHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence            577899999999999999884    66553

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=5.7e-34  Score=294.45  Aligned_cols=236  Identities=24%  Similarity=0.362  Sum_probs=180.3

Q ss_pred             eEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCC
Q 035655          369 VIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS  429 (670)
Q Consensus       369 ~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gs  429 (670)
                      .||+|+||.||+|....                   ..+.|.+|+.+++.++||||+++++.|......++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            58999999999985321                   23578899999999999999999999999999999999999999


Q ss_pred             chhhcccCC--ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC-ccee
Q 035655          430 LDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK-ISHT  506 (670)
Q Consensus       430 L~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~-~~~~  506 (670)
                      |.+++.+..  ....++..+..++.||+.||+|||+   .+++||||||+|||++.++.+||+|||++....... ....
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            999997542  2346777888999999999999998   899999999999999999999999999986432211 1122


Q ss_pred             eccccCcCCCCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          507 TNVVGTIGYIAPELART-------GKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~-------~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ....++..|+|||++..       ..++.++|||||||+++||++ |..||......  +..... ..+......++.+.
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~~~~~~-~~~~~~~~~~~~~~  235 (268)
T cd05086         159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR--EVLNHV-IKDQQVKLFKPQLE  235 (268)
T ss_pred             cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-HhhcccccCCCccC
Confidence            34567889999998743       245789999999999999997 57788643211  111111 11222233344443


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..+.    ..+.+++..|| .+|.+||++++|++.|.
T Consensus       236 ~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         236 LPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            3332    45666778899 67999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=6.1e-34  Score=291.40  Aligned_cols=235  Identities=23%  Similarity=0.393  Sum_probs=192.6

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|+||.||++....                  ..+++.+|+.++++++||||+++.+++...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            47888999999999999986532                  234688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.......+++.++++++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++....... .
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-~  156 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-E  156 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-h
Confidence            999999999976555568999999999999999999998   899999999999999999999999999998654432 1


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ......|++.|+|||++.+..++.++|||||||+++||++|+.||......  +...... .+..     +.    .+..
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--~~~~~~~-~~~~-----~~----~~~~  224 (256)
T cd08218         157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK--NLVLKII-RGSY-----PP----VSSH  224 (256)
T ss_pred             hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH--HHHHHHh-cCCC-----CC----Cccc
Confidence            122346888999999999888999999999999999999999999754321  1111111 1111     11    1122


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+++.+||+.+|.+||++.+|+++
T Consensus       225 ~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         225 YSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             CCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            34567889999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=2e-34  Score=300.13  Aligned_cols=249  Identities=23%  Similarity=0.347  Sum_probs=194.2

Q ss_pred             cchhhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc-ccCceeeeeeeee--
Q 035655          352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL-RHKHLVNLQGWCK--  413 (670)
Q Consensus       352 ~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~--  413 (670)
                      +.++.+..+.++|+..+.||+|+||.||++....               ...++.+|+.+++++ +||||++++++|.  
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   87 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK   87 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence            4456667788999999999999999999987633               124677899999999 6999999999884  


Q ss_pred             ---ccCeeEEEEeccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEE
Q 035655          414 ---RKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR  488 (670)
Q Consensus       414 ---~~~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~k  488 (670)
                         .++..++||||+++++|.+++...  ....+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+|
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~k  164 (286)
T cd06638          88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVK  164 (286)
T ss_pred             ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEE
Confidence               345689999999999999987532  23468999999999999999999998   8999999999999999999999


Q ss_pred             EEeecCceeccCCCcceeeccccCcCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHH
Q 035655          489 LGDFGLARLFDHGKISHTTNVVGTIGYIAPELART-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEF  563 (670)
Q Consensus       489 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~  563 (670)
                      |+|||+++....... ......|+..|+|||++..     ..++.++|||||||+++||++|+.||...... ... ...
T Consensus       165 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-~~~-~~~  241 (286)
T cd06638         165 LVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM-RAL-FKI  241 (286)
T ss_pred             EccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-HHH-hhc
Confidence            999999986644321 2233478999999998753     45788999999999999999999998753221 000 000


Q ss_pred             hhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       564 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      . ........++.       .....+.+++.+||+.+|.+||++.|+++++
T Consensus       242 ~-~~~~~~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         242 P-RNPPPTLHQPE-------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             c-ccCCCcccCCC-------CcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence            0 00000111111       1224578899999999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.3e-34  Score=300.34  Aligned_cols=233  Identities=28%  Similarity=0.428  Sum_probs=189.7

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .|+..+.||+|+||.||+|.+..                 ..+.+.+|++++++++||||+++++++..++..++|+||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            46667889999999999997632                 2346789999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|.+++..   ..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++........ .
T Consensus        85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~  157 (277)
T cd06642          85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-K  157 (277)
T ss_pred             CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcch-h
Confidence            99999999854   358999999999999999999998   8999999999999999999999999999976544321 1


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .....++..|+|||.+.+..++.++|||||||+++||++|+.|+.........+  .      ......+.+    ....
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~--~------~~~~~~~~~----~~~~  225 (277)
T cd06642         158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF--L------IPKNSPPTL----EGQY  225 (277)
T ss_pred             hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh--h------hhcCCCCCC----Cccc
Confidence            223468889999999998889999999999999999999999986532111100  0      000111111    2233


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...+.+++.+||+.+|.+||++.+++++-
T Consensus       226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~  254 (277)
T cd06642         226 SKPFKEFVEACLNKDPRFRPTAKELLKHK  254 (277)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence            45678899999999999999999999964

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.3e-34  Score=310.59  Aligned_cols=242  Identities=25%  Similarity=0.397  Sum_probs=187.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc-C
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK-R  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~-~  416 (670)
                      .++|+..+.||+|+||.||+|....                      ..+.+.+|+.++.++ +||||++++++|... .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            3578899999999999999986310                      134577899999999 689999999988654 5


Q ss_pred             eeEEEEeccCCCCchhhcccCC----------------------------------------------------------
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNE----------------------------------------------------------  438 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~----------------------------------------------------------  438 (670)
                      ..++|+||+++|+|.+++....                                                          
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            6899999999999999986421                                                          


Q ss_pred             -------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc-ceeeccc
Q 035655          439 -------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-SHTTNVV  510 (670)
Q Consensus       439 -------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~  510 (670)
                             ...+++.++.+++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||++........ .......
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                   1247889999999999999999998   8999999999999999999999999999976533221 1122234


Q ss_pred             cCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHH
Q 035655          511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELV  589 (670)
Q Consensus       511 gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l  589 (670)
                      ++..|+|||.+.+..++.++||||||++++||++ |..||....... ..... ...+....  .+.   .    ....+
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~-~~~~~~~~--~~~---~----~~~~~  311 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRR-LKEGTRMR--APD---Y----TTPEM  311 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHH-HhccCCCC--CCC---C----CCHHH
Confidence            5678999999988899999999999999999997 999986532111 11111 11111100  011   1    12457


Q ss_pred             HHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          590 LQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       590 ~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+++..||+.+|.+||++.|++++|+.
T Consensus       312 ~~~~~~cl~~~p~~Rps~~eil~~l~~  338 (343)
T cd05103         312 YQTMLDCWHGEPSQRPTFSELVEHLGN  338 (343)
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            889999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-34  Score=299.08  Aligned_cols=239  Identities=26%  Similarity=0.425  Sum_probs=191.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .+|+..+.||+|+||.||+|....                     ...++.+|+.++++++||||++++++|.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            467888999999999999987421                     23567899999999999999999999987 78999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |+||+++|+|.+++..... .+++..++.++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++....
T Consensus        86 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKD-NIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             EEecCCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence            9999999999999976543 58999999999999999999998   9999999999999999999999999999987654


Q ss_pred             CCccee-eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          501 GKISHT-TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       501 ~~~~~~-~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ...... ....++..|+|||.+....++.++||||||++++|+++ |+.||......  +...... .+..  ...+   
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~-~~~~--~~~~---  233 (279)
T cd05057         162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLE-KGER--LPQP---  233 (279)
T ss_pred             cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHh-CCCC--CCCC---
Confidence            322111 11234568999999988889999999999999999998 99999764321  1111111 1110  0011   


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                          ......+.+++..||..+|.+||++.++++.|+..
T Consensus       234 ----~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~  268 (279)
T cd05057         234 ----PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM  268 (279)
T ss_pred             ----CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence                11224577889999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.3e-34  Score=310.78  Aligned_cols=238  Identities=26%  Similarity=0.342  Sum_probs=184.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                   ....+.+|+.++.+++||||+++++.+.+.+.+++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            468889999999999999987643                   1245678999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++.+.  ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~  155 (360)
T cd05627          81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH  155 (360)
T ss_pred             eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence            999999999999654  358999999999999999999998   999999999999999999999999999987543211


Q ss_pred             c----------------------------------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 035655          503 I----------------------------------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP  548 (670)
Q Consensus       503 ~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~p  548 (670)
                      .                                  .......||+.|+|||++.+..++.++|||||||+++||++|+.|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P  235 (360)
T cd05627         156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP  235 (360)
T ss_pred             ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence            0                                  001234799999999999999999999999999999999999999


Q ss_pred             CCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCC---HHHHHHHh
Q 035655          549 IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVLRYL  614 (670)
Q Consensus       549 f~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~L  614 (670)
                      |........  ........... ...+..  .    ....+.+++..|+ .+|.+|++   ++|+++|-
T Consensus       236 f~~~~~~~~--~~~i~~~~~~~-~~p~~~--~----~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp  294 (360)
T cd05627         236 FCSETPQET--YRKVMNWKETL-VFPPEV--P----ISEKAKDLILRFC-TDSENRIGSNGVEEIKSHP  294 (360)
T ss_pred             CCCCCHHHH--HHHHHcCCCce-ecCCCC--C----CCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCC
Confidence            976432211  11111100000 011111  1    1234555666655 49999984   78888763

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=3.6e-34  Score=304.96  Aligned_cols=243  Identities=19%  Similarity=0.237  Sum_probs=183.2

Q ss_pred             ccceEeee--CceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          366 QSEVIGTG--GFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       366 ~~~~lG~G--~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ..++||+|  +|++||++....                  ..+.+.+|+++++.++||||++++++|..++..++|+||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35789999  789999987643                  1234668999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc-
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS-  504 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~-  504 (670)
                      ++|+|.+++..+....+++..+++++.|++.||.|||+   .+|+||||||+|||++.++.++++||+........... 
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~  158 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL  158 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence            99999999976555568999999999999999999998   89999999999999999999999999865433211100 


Q ss_pred             -----eeeccccCcCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC---
Q 035655          505 -----HTTNVVGTIGYIAPELART--GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD---  574 (670)
Q Consensus       505 -----~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d---  574 (670)
                           ......++..|+|||++.+  ..++.++|||||||+++||++|+.||..........  .. ..+......+   
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~~-~~~~~~~~~~~~~  235 (327)
T cd08227         159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL--EK-LNGTVPCLLDTTT  235 (327)
T ss_pred             cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH--HH-hcCCccccccccc
Confidence                 1122356778999999875  458899999999999999999999997522111000  00 0000000000   


Q ss_pred             ----------------C-----------------CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          575 ----------------P-----------------NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       575 ----------------~-----------------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                                      .                 .............+.+++.+||+.||++|||++|++++-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p  308 (327)
T cd08227         236 IPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS  308 (327)
T ss_pred             hhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence                            0                 000011122345688999999999999999999999853

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=4.5e-34  Score=292.45  Aligned_cols=224  Identities=30%  Similarity=0.481  Sum_probs=180.4

Q ss_pred             ceEeeeCceeEEEeeccc-------------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      +.||+|+||.||+|....                         ....|.+|+.++++++||||++++++|.. ...++|+
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   79 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE   79 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence            468999999999987642                         13467889999999999999999999988 7889999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-------cEEEEeecCc
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-------NARLGDFGLA  495 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-------~~kL~DFGla  495 (670)
                      ||+++|+|.+++..... .+++..+..++.||+.||+|||+   .+++||||||+|||++.++       .+||+|||++
T Consensus        80 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          80 EYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999999999976543 68999999999999999999998   8999999999999999888       7999999999


Q ss_pred             eeccCCCcceeeccccCcCCCCccccccC--CCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccc
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELARTG--KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~  572 (670)
                      .....     .....++..|+|||++...  .++.++||||||++++||++ |..|+......  .+..... .....  
T Consensus       156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~-~~~~~--  225 (259)
T cd05037         156 ITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQ-DQHRL--  225 (259)
T ss_pred             ccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHh-cCCCC--
Confidence            76543     2233567789999998876  78999999999999999999 57777653211  1111111 10000  


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..+         ....+.+++.+||+.+|.+||++.++++.|+
T Consensus       226 ~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         226 PMP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CCC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            000         1156789999999999999999999999774

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.3e-34  Score=300.65  Aligned_cols=251  Identities=26%  Similarity=0.413  Sum_probs=192.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeec--cCee
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--KRDL  418 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--~~~~  418 (670)
                      +.|+..+.||+|+||.||++....                     ..++|.+|++++++++||||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            456778999999999999997421                     14578999999999999999999999987  5578


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||+++++|.+++..... .+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||++...
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVL  159 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCcc-ccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence            999999999999999976542 59999999999999999999998   89999999999999999999999999999876


Q ss_pred             cCCCcce--eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHH---hhcCCccccc
Q 035655          499 DHGKISH--TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEF---QHLGQVLDVV  573 (670)
Q Consensus       499 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~---~~~~~~~~~~  573 (670)
                      .......  .....++..|+|||.+.+..++.++||||||++++||++|+.|+.........+....   .......+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05038         160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL  239 (284)
T ss_pred             ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence            5332211  1123456679999999888999999999999999999999999865221110000000   0000000000


Q ss_pred             CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       574 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ........+......+.+++.+||+.+|.+||++.|+++.|+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05038         240 KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR  282 (284)
T ss_pred             HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence            0111111112233668899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2e-34  Score=306.72  Aligned_cols=228  Identities=24%  Similarity=0.273  Sum_probs=177.8

Q ss_pred             ceEeeeCceeEEEeeccch-------------------HHHHHHHH-HHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPTR-------------------MREFAAEI-ESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei-~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||+++....                   ...+..|. .+++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4699999999999976431                   12233443 356788999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++...  ..+++.....++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~~  154 (325)
T cd05602          81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTS  154 (325)
T ss_pred             CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCcc
Confidence            9999999654  357888889999999999999998   899999999999999999999999999997543221 2233


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||+++||++|+.||......  +....... ..      ..+    ......
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~-~~------~~~----~~~~~~  221 (325)
T cd05602         155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDNILN-KP------LQL----KPNITN  221 (325)
T ss_pred             cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--HHHHHHHh-CC------cCC----CCCCCH
Confidence            457999999999999999999999999999999999999999754321  11111111 10      011    112234


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .+.+++..|++.+|.+||+..+.+..+
T Consensus       222 ~~~~li~~~l~~~p~~R~~~~~~~~~i  248 (325)
T cd05602         222 SARHLLEGLLQKDRTKRLGAKDDFMEI  248 (325)
T ss_pred             HHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence            567888999999999999877444333

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=2.9e-34  Score=303.97  Aligned_cols=181  Identities=28%  Similarity=0.414  Sum_probs=150.3

Q ss_pred             cceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeec--cCeeEEEEeccCCC
Q 035655          367 SEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNG  428 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--~~~~~lV~E~~~~g  428 (670)
                      .++||+|+||.||+|....                ....+.+|++++++++||||+++++++..  +...++|+||+. +
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~   84 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-H   84 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-C
Confidence            4689999999999998532                12457899999999999999999998854  456899999985 5


Q ss_pred             CchhhcccC-------CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe----cCCCcEEEEeecCcee
Q 035655          429 SLDSLLFDN-------ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARL  497 (670)
Q Consensus       429 sL~~~l~~~-------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl----d~~~~~kL~DFGla~~  497 (670)
                      +|.+++...       ....+++..+..++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||+++.
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07868          85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence            888776432       12358999999999999999999998   899999999999999    4567899999999987


Q ss_pred             ccCCCc--ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCC
Q 035655          498 FDHGKI--SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDS  551 (670)
Q Consensus       498 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~  551 (670)
                      ......  .......||+.|+|||++.+. .++.++||||+||+++||++|+.||..
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            654321  122345789999999998764 588999999999999999999999964

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=5.2e-34  Score=293.16  Aligned_cols=241  Identities=25%  Similarity=0.392  Sum_probs=193.9

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..+.||+|+||.||+|....                 ..+.+.+|++.++.++|+||+++++.+...+..++|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            478889999999999999997532                 246788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCc-cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          425 IPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      +++++|.+++..... ..+++..+..++.|++.||+|||+   .+++||||||+||++++++.+||+|||++........
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            999999999976432 468999999999999999999998   9999999999999999999999999999876654332


Q ss_pred             c---eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          504 S---HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       504 ~---~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      .   ......|+..|+|||.+... .++.++|||||||+++||++|+.||........  .......      ..+.+..
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~------~~~~~~~  229 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LMLTLQN------DPPSLET  229 (267)
T ss_pred             ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHHHhcC------CCCCcCC
Confidence            2   12334689999999998877 789999999999999999999999975322111  0010000      1111111


Q ss_pred             cc-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          580 SY-VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       580 ~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .. .......+.+++..||+.||.+||++++++++
T Consensus       230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         230 GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            11 12334667899999999999999999999975

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.6e-34  Score=308.24  Aligned_cols=245  Identities=23%  Similarity=0.295  Sum_probs=186.0

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC-----
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR-----  416 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-----  416 (670)
                      ..++|+..+.||+|+||.||++....                  ....+.+|+.+++.++||||+++++++...+     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            45789999999999999999997532                  2346778999999999999999999986443     


Q ss_pred             -eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCc
Q 035655          417 -DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA  495 (670)
Q Consensus       417 -~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla  495 (670)
                       ..++||||+++ +|.+.+.    ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a  170 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA  170 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence             57999999965 5666653    247889999999999999999999   89999999999999999999999999999


Q ss_pred             eeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC-------
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ-------  568 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~-------  568 (670)
                      +......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ..|.......+.       
T Consensus       171 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~  247 (359)
T cd07876         171 RTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQLGTPSAEFMN  247 (359)
T ss_pred             cccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCcHHHHH
Confidence            7543321  223457899999999999999999999999999999999999999753211 111100000000       


Q ss_pred             -----ccc--ccCCCCC----------------CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          569 -----VLD--VVDPNLG----------------SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       569 -----~~~--~~d~~l~----------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                           ...  ...+...                ..........+.+++..||+.||++|||+.|+++|-+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  317 (359)
T cd07876         248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY  317 (359)
T ss_pred             HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence                 000  0000000                0011112356788999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=3.9e-34  Score=295.04  Aligned_cols=235  Identities=25%  Similarity=0.431  Sum_probs=183.9

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeec--cCee
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--KRDL  418 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--~~~~  418 (670)
                      .+|+..+.||+|+||.||++....                     ....+.+|+.++++++||||+++++++.+  ....
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            478889999999999999997532                     12357789999999999999999998865  3578


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++++||+++++|.+++....  .+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++..
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence            99999999999999996543  48999999999999999999998   89999999999999999999999999999765


Q ss_pred             cCCC--cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          499 DHGK--ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       499 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ....  ........++..|+|||++.+..++.++|||||||+++||++|+.||......  ........     ....+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~--~~~~~~~~-----~~~~~~  229 (266)
T cd06651         157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM--AAIFKIAT-----QPTNPQ  229 (266)
T ss_pred             ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH--HHHHHHhc-----CCCCCC
Confidence            3311  11122346889999999999888999999999999999999999999753211  11111111     011122


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +    +....+.+..++ .||..+|.+||+++||++|
T Consensus       230 ~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         230 L----PSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             C----chhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence            2    222223344444 6999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.2e-35  Score=312.59  Aligned_cols=228  Identities=23%  Similarity=0.400  Sum_probs=184.1

Q ss_pred             ccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC--eeEEEEe
Q 035655          366 QSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR--DLLLVYD  423 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~--~~~lV~E  423 (670)
                      ...+||+|.|-+||||.+..                    ..+.|..|+.+|+.|+||||++++..+.+..  ..-+|.|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            35679999999999998744                    3467889999999999999999999887654  4889999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-CcEEEEeecCceeccCCC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDHGK  502 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-~~~kL~DFGla~~~~~~~  502 (670)
                      .|..|+|..|+.+.+  .++...+.+|++||++||.|||+. .++|||||||.+||+|+.+ |.|||+|+|||.......
T Consensus       124 L~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~  200 (632)
T KOG0584|consen  124 LFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH  200 (632)
T ss_pred             cccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence            999999999998765  478889999999999999999995 5899999999999999754 799999999998876643


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch--hHHHHHHHhhcCCcccccCCCCCCc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI--LVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                         ...+.|||.|||||.+. ..|++..||||||++++||+|+..||..-...  +-..+..-.....+..+-|      
T Consensus       201 ---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~d------  270 (632)
T KOG0584|consen  201 ---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKD------  270 (632)
T ss_pred             ---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCC------
Confidence               44579999999999887 78999999999999999999999999742110  1111111011111111112      


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                            .++.+++..|+.. .++|||+.|+|++
T Consensus       271 ------Pevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  271 ------PEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             ------HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence                  3467888999999 9999999999984

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=3.8e-34  Score=302.74  Aligned_cols=181  Identities=28%  Similarity=0.421  Sum_probs=150.1

Q ss_pred             cceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeee--ccCeeEEEEeccCCC
Q 035655          367 SEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCK--RKRDLLLVYDYIPNG  428 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~--~~~~~~lV~E~~~~g  428 (670)
                      ..+||+|+||.||+|....                ....+.+|++++++++||||+++++++.  .+...++|+||+++ 
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-   84 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-   84 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence            4689999999999998542                1236789999999999999999999885  35678999999864 


Q ss_pred             CchhhcccC-------CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe----cCCCcEEEEeecCcee
Q 035655          429 SLDSLLFDN-------ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARL  497 (670)
Q Consensus       429 sL~~~l~~~-------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl----d~~~~~kL~DFGla~~  497 (670)
                      +|.+++...       ....+++..+..++.||+.||.|||+   .+++||||||+|||+    +.++.+||+|||+++.
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867          85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence            777776421       12358899999999999999999998   899999999999999    5667899999999987


Q ss_pred             ccCCCc--ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCC
Q 035655          498 FDHGKI--SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDS  551 (670)
Q Consensus       498 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~  551 (670)
                      ......  .......||+.|+|||++.+. .++.++|||||||+++||++|+.||..
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence            654322  122345789999999988764 578999999999999999999999964

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=6.5e-34  Score=295.90  Aligned_cols=246  Identities=26%  Similarity=0.292  Sum_probs=189.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|+..+.||+|+||.||++....                  ..+.+.+|++++++++||||+++++++......++|+|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            468888999999999999997643                  12457799999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |++++.|..++...  ..+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........
T Consensus        81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07847          81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD  155 (286)
T ss_pred             ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence            99999998877543  358999999999999999999999   9999999999999999999999999999987654321


Q ss_pred             ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhc------------CCc-
Q 035655          504 SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHL------------GQV-  569 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~------------~~~-  569 (670)
                       ......++..|+|||.+.+ ..++.++||||||++++||++|+.||.........+.......            ... 
T Consensus       156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (286)
T cd07847         156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF  234 (286)
T ss_pred             -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc
Confidence             2223467889999998876 4578999999999999999999999975332111111110000            000 


Q ss_pred             ccccCCCCCCcc-----cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 LDVVDPNLGSSY-----VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ~~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .....+......     .......+.+++.+||+++|.+||++.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            000011110000     01124567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=1.2e-33  Score=295.61  Aligned_cols=237  Identities=25%  Similarity=0.388  Sum_probs=188.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      +.|++.++||+|+||.||+|....                ..+.+.+|++++++++||||+++++.+..++..++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            568889999999999999997643                2456888999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|..++.+.. ..+++..+..++.|++.+|.|||+   .+++||||||+||+++.++.+||+|||++....... ..
T Consensus        92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~  166 (292)
T cd06644          92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-QR  166 (292)
T ss_pred             CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccc-cc
Confidence            9999998876543 368999999999999999999998   899999999999999999999999999987543321 22


Q ss_pred             eeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          506 TTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .....++..|+|||++.     ...++.++|||||||++|||++|+.||......  .........      ..+..  .
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~------~~~~~--~  236 (292)
T cd06644         167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAKS------EPPTL--S  236 (292)
T ss_pred             cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--HHHHHHhcC------CCccC--C
Confidence            23456889999999884     345688999999999999999999998753321  111111111      11111  0


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .+......+.+++.+||+.+|++||++++++++
T Consensus       237 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            111223457789999999999999999999875

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=4.3e-34  Score=304.04  Aligned_cols=232  Identities=24%  Similarity=0.313  Sum_probs=183.7

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      +|+..+.||+|+||.||++....                   ..+.+..|+.+++.+. |++|+++.+++.+.+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            46778999999999999997643                   1234667888888886 577888999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++......
T Consensus        81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~  155 (323)
T cd05615          81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG  155 (323)
T ss_pred             cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence            999999999998654  358999999999999999999998   899999999999999999999999999987543222


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       .......||+.|+|||++.+..++.++|||||||+++||++|+.||........  ...... ..      ..    ++
T Consensus       156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~--~~~i~~-~~------~~----~p  221 (323)
T cd05615         156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL--FQSIME-HN------VS----YP  221 (323)
T ss_pred             -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH--HHHHHh-CC------CC----CC
Confidence             122345699999999999988999999999999999999999999976432111  111111 11      11    11


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTM-----RQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  613 (670)
                      ......+.+++.+|++++|.+|++.     +++.+|
T Consensus       222 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05615         222 KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH  257 (323)
T ss_pred             ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence            1223456788999999999999974     555554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.9e-34  Score=303.76  Aligned_cols=239  Identities=28%  Similarity=0.463  Sum_probs=189.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      .++|+..+.||+|+||.||+|....                     ...++.+|+.++++++||||++++++|... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~   84 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ   84 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence            3567788999999999999986421                     123678999999999999999999999754 467


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +++||+++|+|.+++.... ..+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus        85 ~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110          85 LVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLE  160 (303)
T ss_pred             eeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEcccccccccc
Confidence            9999999999999987643 358999999999999999999998   899999999999999999999999999998665


Q ss_pred             CCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCC
Q 035655          500 HGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       500 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ..... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||...... ..++.    ..+...  ..+ 
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~----~~~~~~--~~~-  233 (303)
T cd05110         161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL----EKGERL--PQP-  233 (303)
T ss_pred             CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----HCCCCC--CCC-
Confidence            43221 1222345778999999998899999999999999999997 99999753221 11111    111100  001 


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                            ......+.+++..||..+|++||+++++++.|+..
T Consensus       234 ------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~  268 (303)
T cd05110         234 ------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM  268 (303)
T ss_pred             ------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                  11234577899999999999999999999998754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.6e-34  Score=291.44  Aligned_cols=232  Identities=30%  Similarity=0.464  Sum_probs=186.3

Q ss_pred             ceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCch
Q 035655          368 EVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLD  431 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~  431 (670)
                      ++||+|+||.||++....                ....+.+|++++++++|+||+++++++......++|+||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            468999999999997642                2357889999999999999999999999999999999999999999


Q ss_pred             hhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee-eccc
Q 035655          432 SLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVV  510 (670)
Q Consensus       432 ~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~-~~~~  510 (670)
                      +++.+.. ..+++..+..++.+++.+|+|||+   ++++||||||+||+++.++.+||+|||++........... ....
T Consensus        81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (251)
T cd05041          81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ  156 (251)
T ss_pred             HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence            9996643 368999999999999999999998   8999999999999999999999999999976543221111 1223


Q ss_pred             cCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHH
Q 035655          511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELV  589 (670)
Q Consensus       511 gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l  589 (670)
                      ++..|+|||.+.++.++.++||||||++++||++ |..||........  ..... ..  ..       ...+......+
T Consensus       157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~--~~~~~-~~--~~-------~~~~~~~~~~~  224 (251)
T cd05041         157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT--RERIE-SG--YR-------MPAPQLCPEEI  224 (251)
T ss_pred             ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH--HHHHh-cC--CC-------CCCCccCCHHH
Confidence            4667999999988899999999999999999999 8888865332111  10110 00  00       01112234568


Q ss_pred             HHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          590 LQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       590 ~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .+++.+|++.+|.+||++.|+++.|+
T Consensus       225 ~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         225 YRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHHhccChhhCcCHHHHHHHhh
Confidence            88999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.2e-34  Score=295.36  Aligned_cols=233  Identities=24%  Similarity=0.465  Sum_probs=188.5

Q ss_pred             ccccceEeeeCceeEEEeeccc-------------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT-------------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~-------------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      |...+.||+|++|.||+|....                         ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            5677899999999999997532                         014577899999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||+++++|.+++...  ..+++..+..++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++..
T Consensus        82 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~  156 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKL  156 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence            9999999999999999654  358999999999999999999998   89999999999999999999999999999866


Q ss_pred             cCCCc-----ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccccc
Q 035655          499 DHGKI-----SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV  573 (670)
Q Consensus       499 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  573 (670)
                      .....     .......|+..|+|||.+.+..++.++|||||||+++||++|+.||.......  -....      ....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~------~~~~  228 (267)
T cd06628         157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--AIFKI------GENA  228 (267)
T ss_pred             ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--HHHHH------hccC
Confidence            53211     11123468899999999998889999999999999999999999997532211  11110      0111


Q ss_pred             CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       574 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .+.+    +......+.+++.+||+++|.+||++.|++++
T Consensus       229 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         229 SPEI----PSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             CCcC----CcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            1222    22234567889999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2.5e-34  Score=305.97  Aligned_cols=223  Identities=25%  Similarity=0.304  Sum_probs=176.0

Q ss_pred             ceEeeeCceeEEEeeccc-------------------hHHHHHHHHH-HHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT-------------------RMREFAAEIE-SLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~-~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||++....                   ....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            469999999999997543                   1123445554 46779999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|..++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~  154 (325)
T cd05604          81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DTTT  154 (325)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CCcc
Confidence            9999988654  368999999999999999999998   899999999999999999999999999987532211 2233


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||+++||++|+.||.......  ...... ....  ...+        ....
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~~~~~~-~~~~--~~~~--------~~~~  221 (325)
T cd05604         155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE--MYDNIL-HKPL--VLRP--------GASL  221 (325)
T ss_pred             cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH--HHHHHH-cCCc--cCCC--------CCCH
Confidence            4579999999999999999999999999999999999999997643211  111111 1110  1111        1234


Q ss_pred             HHHHHHHhhccCCCCCCCCHHH
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQ  609 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~e  609 (670)
                      .+.+++..|++.+|.+||++++
T Consensus       222 ~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         222 TAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHHHHHHHHhccCHHhcCCCCC
Confidence            5678889999999999998763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=5.2e-34  Score=298.12  Aligned_cols=248  Identities=26%  Similarity=0.358  Sum_probs=194.2

Q ss_pred             cchhhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc
Q 035655          352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK  415 (670)
Q Consensus       352 ~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~  415 (670)
                      +.+.++..++++|+..+.||+|+||.||++....               ....+.+|+.+++++ +|||+++++++|...
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            4556777788999999999999999999987643               134667899999999 799999999998754


Q ss_pred             -----CeeEEEEeccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEE
Q 035655          416 -----RDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR  488 (670)
Q Consensus       416 -----~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~k  488 (670)
                           +..++|+||+++++|.+++...  ....+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+|
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~k  168 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVK  168 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEE
Confidence                 3589999999999999988642  23468999999999999999999998   8999999999999999999999


Q ss_pred             EEeecCceeccCCCcceeeccccCcCCCCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHH
Q 035655          489 LGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG-----KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEF  563 (670)
Q Consensus       489 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~  563 (670)
                      |+|||++........ ......|+..|+|||.+...     .++.++|||||||+++||++|+.||........  ....
T Consensus       169 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~--~~~~  245 (291)
T cd06639         169 LVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT--LFKI  245 (291)
T ss_pred             Eeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH--HHHH
Confidence            999999876543221 12234688999999987644     368899999999999999999999975322100  1111


Q ss_pred             hhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       564 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      . ....     +.+.  .+.+....+.+++.+||+.+|.+||++.|++++
T Consensus       246 ~-~~~~-----~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         246 P-RNPP-----PTLL--HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             h-cCCC-----CCCC--cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            0 1111     1110  111223468889999999999999999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=5.5e-34  Score=293.77  Aligned_cols=239  Identities=23%  Similarity=0.378  Sum_probs=188.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|...+.||+|+||.||++....                ....+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            3468888999999999999997633                224577899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++....  .+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++....... .
T Consensus        88 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~  161 (267)
T cd06645          88 CGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-A  161 (267)
T ss_pred             cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-c
Confidence            99999999986543  58999999999999999999998   899999999999999999999999999987654322 2


Q ss_pred             eeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ......|+..|+|||++.   ...++.++|||||||+++||++|+.||.........+..   .....   ..+....  
T Consensus       162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~---~~~~~---~~~~~~~--  233 (267)
T cd06645         162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM---TKSNF---QPPKLKD--  233 (267)
T ss_pred             ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh---hccCC---CCCcccc--
Confidence            223457899999999874   456889999999999999999999998653321111110   00110   0111110  


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .......+.+++..|++.+|++||++++++++
T Consensus       234 ~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         234 KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            00122457789999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-35  Score=314.61  Aligned_cols=237  Identities=27%  Similarity=0.391  Sum_probs=199.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      +.....++||+|.||.|++|.+..                    .+.+|.+|+.+|-+|+|||+++|+|+..+ ...++|
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV  188 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV  188 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence            344557899999999999997743                    46899999999999999999999999887 778999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +|+++.|||.+.|++..+..|.-.....++.|||.||.||.+   +++|||||.++|+||-....+||+||||.+.+..+
T Consensus       189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~n  265 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN  265 (1039)
T ss_pred             hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence            999999999999988666678889999999999999999999   99999999999999999999999999999987665


Q ss_pred             Cccee--eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          502 KISHT--TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       502 ~~~~~--~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .....  ....-...|+|||.++...++.++|||+|||.||||++ |..||-+-...            .+++.+|.+-+
T Consensus       266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~------------qIL~~iD~~er  333 (1039)
T KOG0199|consen  266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI------------QILKNIDAGER  333 (1039)
T ss_pred             CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH------------HHHHhcccccc
Confidence            53332  22345678999999999999999999999999999999 89999763322            11222232222


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      -.-++.+.+.+.++++.||..+|.+||++..|.+.+
T Consensus       334 LpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence            334556778999999999999999999999998544

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=4.5e-34  Score=330.29  Aligned_cols=242  Identities=24%  Similarity=0.304  Sum_probs=189.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..++||+|+||.||+|....                   ..+.|.+|++++++++||||+++++++.+++..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            478899999999999999997642                   1346889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccC---------CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          423 DYIPNGSLDSLLFDN---------ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       423 E~~~~gsL~~~l~~~---------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      ||+++|+|.+++...         ....+++..+++++.||++||+|||+   .+|+||||||+|||++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence            999999999998642         12346778889999999999999998   899999999999999999999999999


Q ss_pred             CceeccCCCc-----------------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchh
Q 035655          494 LARLFDHGKI-----------------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL  556 (670)
Q Consensus       494 la~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~  556 (670)
                      +++.......                 .......||+.|||||++.+..++.++|||||||+++||++|+.||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            9986622110                 01122469999999999999999999999999999999999999997532211


Q ss_pred             HHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhcC
Q 035655          557 VDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARP-TMRQVLRYLNG  616 (670)
Q Consensus       557 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~  616 (670)
                      ....      ...   .++.-.. .....+..+.+++.+|++.||++|| +++++++.|+.
T Consensus       239 i~~~------~~i---~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~  289 (932)
T PRK13184        239 ISYR------DVI---LSPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP  289 (932)
T ss_pred             hhhh------hhc---cChhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            1100      000   0110000 0112234577889999999999996 56666666653

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-34  Score=291.50  Aligned_cols=240  Identities=26%  Similarity=0.375  Sum_probs=193.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|+..+.||+|+||.||++....                ..+.+.+|++++++++||||+++++.+...+..+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            3678899999999999999997643                246788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.... ..+++.++..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||++....... .
T Consensus        82 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~  156 (262)
T cd06613          82 CGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-A  156 (262)
T ss_pred             CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhh-h
Confidence            99999999986642 368999999999999999999998   899999999999999999999999999987654322 1


Q ss_pred             eeeccccCcCCCCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELARTG---KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~---~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ......++..|+|||.+.+.   .++.++|||||||+++||++|+.||...........   ......   ..+.+  ..
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~---~~~~~~---~~~~~--~~  228 (262)
T cd06613         157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL---ISKSNF---PPPKL--KD  228 (262)
T ss_pred             ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhccC---CCccc--cc
Confidence            22345788899999998776   789999999999999999999999975332111111   011100   01111  12


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .......+.+++.+||+.+|.+||++.+++++
T Consensus       229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         229 KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             hhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            22345678899999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=4.1e-34  Score=292.27  Aligned_cols=234  Identities=24%  Similarity=0.401  Sum_probs=190.7

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|+||.||++....                  ..+.+.+|++++++++||||+++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            47788999999999999986532                  235688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceeccCCCc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFDHGKI  503 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~~~~  503 (670)
                      +++++|.+++.+.....+++..+.+++.|++.+|.|||+   ++++|+||||+||+++++. .+||+|||++....... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-  156 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-  156 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence            999999999987655668999999999999999999998   8999999999999998654 57999999998765432 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                       ......++..|+|||.+.+..++.++||||||+++++|++|+.||......  ........ ....     .    .+.
T Consensus       157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~-~~~~-----~----~~~  223 (256)
T cd08220         157 -KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKIMS-GTFA-----P----ISD  223 (256)
T ss_pred             -cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHHHh-cCCC-----C----CCC
Confidence             122346889999999999888999999999999999999999999764321  11111111 1100     0    111


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .....+.+++..||+.+|.+||+++|++++
T Consensus       224 ~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         224 RYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             CcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            223567889999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.7e-33  Score=290.54  Aligned_cols=238  Identities=27%  Similarity=0.403  Sum_probs=190.5

Q ss_pred             CccccceEeeeCceeEEEeeccc---------------------------hHHHHHHHHHHHhc-cccCceeeeeeeeec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT---------------------------RMREFAAEIESLGR-LRHKHLVNLQGWCKR  414 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~---------------------------~~~~f~~Ei~~L~~-l~H~nIv~l~g~~~~  414 (670)
                      +|+..+.||+|+||.||++....                           ...++.+|+.++.+ ++||||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47788899999999999998643                           11346678888875 799999999999999


Q ss_pred             cCeeEEEEeccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                      ++..++||||+++++|.+++..  .....+++..+++++.|++.||.|||+  ..+++|+||||+||+++.++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df  158 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF  158 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence            9999999999999999998854  233468999999999999999999996  268999999999999999999999999


Q ss_pred             cCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccc
Q 035655          493 GLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       493 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~  572 (670)
                      |++.......  ......|+..|+|||.+.+..++.++||||||+++|||++|+.||........  ..... .....  
T Consensus       159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~--~~~~~-~~~~~--  231 (269)
T cd08528         159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL--ATKIV-EAVYE--  231 (269)
T ss_pred             cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH--HHHHh-hccCC--
Confidence            9998765433  33445789999999999988899999999999999999999999975432211  11111 11111  


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                        +..    .......+.+++.+||+.||++||++.|+.++++
T Consensus       232 --~~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         232 --PLP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             --cCC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence              100    0112356788999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=8e-34  Score=294.66  Aligned_cols=234  Identities=27%  Similarity=0.411  Sum_probs=192.2

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .|+..++||+|+||.||+|....                 ....+.+|+.++++++||||+++++.+.+....++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            46678899999999999997643                 2346789999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|.+++..   ..+++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++........ .
T Consensus        85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~  157 (277)
T cd06640          85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-K  157 (277)
T ss_pred             CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-c
Confidence            99999999854   358899999999999999999998   8999999999999999999999999999976644321 2


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .....++..|+|||++.+..++.++|||||||+++||++|+.||..........            ..............
T Consensus       158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~------------~~~~~~~~~~~~~~  225 (277)
T cd06640         158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF------------LIPKNNPPTLTGEF  225 (277)
T ss_pred             cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh------------hhhcCCCCCCchhh
Confidence            233468889999999988889999999999999999999999987532211100            00011112233345


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...+.+++..||+.+|.+||++++++++-.
T Consensus       226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  255 (277)
T cd06640         226 SKPFKEFIDACLNKDPSFRPTAKELLKHKF  255 (277)
T ss_pred             hHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence            567889999999999999999999998743

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=6e-34  Score=299.13  Aligned_cols=236  Identities=22%  Similarity=0.364  Sum_probs=191.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|...+.||+|+||.||++....                ..+.+.+|+.+++.++||||++++++|...+..++|+||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            3678899999999999999997532                235678899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.+   ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++........ 
T Consensus        98 ~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-  170 (297)
T cd06656          98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-  170 (297)
T ss_pred             cCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc-
Confidence            999999999854   358999999999999999999998   8999999999999999999999999999986544322 


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ......+++.|+|||.+.+..++.++|||||||++++|++|+.||..........  .....+      .+.+  ..+..
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~--~~~~~~------~~~~--~~~~~  240 (297)
T cd06656         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIATNG------TPEL--QNPER  240 (297)
T ss_pred             CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee--eeccCC------CCCC--CCccc
Confidence            1233468899999999998889999999999999999999999997533210000  000000      0111  11222


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+++..||+.+|.+||++++++++
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         241 LSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            33557788999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=4.4e-34  Score=307.82  Aligned_cols=245  Identities=21%  Similarity=0.268  Sum_probs=186.8

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----  415 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----  415 (670)
                      ...++|+..+.||+|+||.||++....                  ..+.+.+|+.+++.++||||+++++++...     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            346789999999999999999986532                  234677899999999999999999988643     


Q ss_pred             -CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          416 -RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       416 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                       ...++||||+++ +|.+++.    ..+++..+..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~  165 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence             357999999965 6766663    248899999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhh---------
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQH---------  565 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~---------  565 (670)
                      ++......  ......||..|+|||++.+..++.++|||||||+++||++|+.||...... ..+......         
T Consensus       166 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~  242 (355)
T cd07874         166 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFM  242 (355)
T ss_pred             cccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence            98654322  223457899999999999889999999999999999999999999763311 111100000         


Q ss_pred             -------------cCCcccccCCCC--------CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          566 -------------LGQVLDVVDPNL--------GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       566 -------------~~~~~~~~d~~l--------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                                   .........+..        ...........+.+++.+|++.||++|||+.|++++-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp  312 (355)
T cd07874         243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP  312 (355)
T ss_pred             HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence                         000000000000        0011112245678999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=5e-34  Score=292.42  Aligned_cols=238  Identities=24%  Similarity=0.375  Sum_probs=190.9

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec--cCeeEEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVY  422 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--~~~~~lV~  422 (670)
                      +|+..+.||.|+||.||++....                  ..+.+..|++++++++||||+++++++..  +...++++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            47778999999999999986532                  23467889999999999999999998754  45689999


Q ss_pred             eccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccc--cceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          423 DYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEW--EQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       423 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~--~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ||+++++|.+++...  ....+++..++.++.|++.||.|||..+  ..+++|+||||+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999999998653  2356899999999999999999999321  289999999999999999999999999999876


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ..... ......++..|+|||.+.+..++.++||||||+++++|++|+.||......  .... ....+.     .+   
T Consensus       161 ~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~-~~~~~~-----~~---  228 (265)
T cd08217         161 GHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--QLAS-KIKEGK-----FR---  228 (265)
T ss_pred             cCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--HHHH-HHhcCC-----CC---
Confidence            55432 123346899999999999888999999999999999999999999864321  1111 111111     11   


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                       ..+......+.+++.+|++.+|.+||++++|+++
T Consensus       229 -~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         229 -RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             -CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence             1222334678899999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-34  Score=276.92  Aligned_cols=247  Identities=25%  Similarity=0.287  Sum_probs=194.4

Q ss_pred             HhhcCccccceEeeeCceeEEEeecc----------------chHHHHHHHHHHHhccccCceeeeeeeeecc-----Ce
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLP----------------TRMREFAAEIESLGRLRHKHLVNLQGWCKRK-----RD  417 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~----------------~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~  417 (670)
                      ...++|.+.++||+|||+.||++..-                ++.+...+|++.-++++|||++++++++..+     .+
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            34578999999999999999998621                2456678999999999999999999988543     45


Q ss_pred             eEEEEeccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCc
Q 035655          418 LLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA  495 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla  495 (670)
                      .||+++|...|+|.+.+...  ++..+++.+.++|+.+|++||.+||+. .++++||||||.|||+.+++.++|.|||.+
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence            99999999999999998753  344699999999999999999999982 235999999999999999999999999998


Q ss_pred             eeccCCCc--------ceeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHh
Q 035655          496 RLFDHGKI--------SHTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ  564 (670)
Q Consensus       496 ~~~~~~~~--------~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~  564 (670)
                      ....-...        .......-|..|.|||.+.   +...++++|||||||+||+|+.|..||+..          ..
T Consensus       177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~----------~~  246 (302)
T KOG2345|consen  177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI----------YQ  246 (302)
T ss_pred             cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH----------hh
Confidence            65432110        1112235688999999875   445789999999999999999999999741          11


Q ss_pred             hcCCcc-cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          565 HLGQVL-DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       565 ~~~~~~-~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+. .+..+.+...-.....+.+.+++.+|++.||.+||++.+++..++.
T Consensus       247 ~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  247 QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence            222222 1222233222223356889999999999999999999999998864

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=6.9e-34  Score=307.44  Aligned_cols=245  Identities=22%  Similarity=0.287  Sum_probs=186.4

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----  415 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----  415 (670)
                      ...++|+..+.||+|+||.||++....                  ..+.+.+|+.+++.++||||+++++++...     
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence            345789999999999999999987532                  234677899999999999999999987543     


Q ss_pred             -CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          416 -RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       416 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                       ...++||||+++ +|.+++.    ..+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus       101 ~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         101 FQDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             cCeEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence             357999999965 7777763    247899999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcC-------
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG-------  567 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~-------  567 (670)
                      ++......  ......||..|+|||++.+..++.++|||||||+++||++|+.||...... ..+.......+       
T Consensus       173 a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~  249 (364)
T cd07875         173 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCPEFM  249 (364)
T ss_pred             ccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence            98654322  223457899999999999999999999999999999999999999753211 01100000000       


Q ss_pred             ---------------Ccc----cccCCCC----CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          568 ---------------QVL----DVVDPNL----GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       568 ---------------~~~----~~~d~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                                     ...    +...+..    ...........+.+++.+|++.||.+|||+.|+++|-
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp  319 (364)
T cd07875         250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  319 (364)
T ss_pred             HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence                           000    0000000    0011111234678999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=5.9e-34  Score=293.21  Aligned_cols=236  Identities=26%  Similarity=0.431  Sum_probs=188.3

Q ss_pred             CccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      +|...+.||+|+||.||+|....                     ....+.+|++++++++|+||++++++|.+.+..++|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            46778999999999999986522                     124577899999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +||+++++|.+++.+.  ..+++..+..++.|++.||+|||+   .+++|+||||+||++++++.+||+|||++......
T Consensus        81 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  155 (265)
T cd06631          81 MEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV  155 (265)
T ss_pred             EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence            9999999999999654  358899999999999999999998   89999999999999999999999999998754321


Q ss_pred             C-----cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          502 K-----ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       502 ~-----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      .     ........|+..|+|||++.+..++.++|||||||+++||++|+.||...+... .. ........    ..+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~-~~~~~~~~----~~~~  229 (265)
T cd06631         156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AM-FYIGAHRG----LMPR  229 (265)
T ss_pred             cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HH-HHhhhccC----CCCC
Confidence            1     111223468999999999998889999999999999999999999997532211 11 00011000    1111


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +..    .....+.+++.+||+++|.+||++.+++++
T Consensus       230 ~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         230 LPD----SFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             CCC----CCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            211    233567889999999999999999999864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=9.8e-34  Score=316.41  Aligned_cols=252  Identities=23%  Similarity=0.292  Sum_probs=185.2

Q ss_pred             hHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccC------ceeeeeeeeec
Q 035655          356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHK------HLVNLQGWCKR  414 (670)
Q Consensus       356 ~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~------nIv~l~g~~~~  414 (670)
                      ++...+++|++.++||+|+||+||++....               ..+++..|++++++++|.      +++++++++..
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            334457889999999999999999997643               123456788888887654      58899998876


Q ss_pred             c-CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC--------
Q 035655          415 K-RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM--------  485 (670)
Q Consensus       415 ~-~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~--------  485 (670)
                      . ...|+|||++ +++|.+++.+.  ..+++..+..++.||+.||.|||+  +.+|+||||||+|||++.++        
T Consensus       203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~~  277 (467)
T PTZ00284        203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVTN  277 (467)
T ss_pred             CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccccc
Confidence            4 5689999988 77898888654  368999999999999999999997  25999999999999998765        


Q ss_pred             --------cEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-h
Q 035655          486 --------NARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-L  556 (670)
Q Consensus       486 --------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~  556 (670)
                              .+||+|||++.....    ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .
T Consensus       278 ~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~  353 (467)
T PTZ00284        278 RALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH  353 (467)
T ss_pred             cccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                    499999998864322    234468999999999999999999999999999999999999999763321 1


Q ss_pred             HHHHHHHh---------------------hcCCcccccCCCC----CC-c--ccHHHHHHHHHHHHhhccCCCCCCCCHH
Q 035655          557 VDWVLEFQ---------------------HLGQVLDVVDPNL----GS-S--YVVAEMELVLQLGLLCSHQKAEARPTMR  608 (670)
Q Consensus       557 ~~~~~~~~---------------------~~~~~~~~~d~~l----~~-~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  608 (670)
                      ...+....                     ..+.+....++..    .. .  ........+++|+..||+.||.+|||++
T Consensus       354 ~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~  433 (467)
T PTZ00284        354 LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNAR  433 (467)
T ss_pred             HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHH
Confidence            11100000                     0000000000000    00 0  0001124577999999999999999999


Q ss_pred             HHHHHhcC
Q 035655          609 QVLRYLNG  616 (670)
Q Consensus       609 evl~~L~~  616 (670)
                      |+++|-.-
T Consensus       434 e~L~Hp~~  441 (467)
T PTZ00284        434 QMTTHPYV  441 (467)
T ss_pred             HHhcCccc
Confidence            99996543

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.6e-33  Score=291.25  Aligned_cols=239  Identities=26%  Similarity=0.458  Sum_probs=188.9

Q ss_pred             CccccceEeeeCceeEEEeeccc--------------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT--------------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR  416 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~--------------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~  416 (670)
                      +|...+.||+|+||.||+|....                          ..+.+.+|+.++++++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            46678899999999999996432                          0135678999999999999999999999999


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..++|+||+++++|.+++.+.  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~  156 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISK  156 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence            999999999999999999765  368999999999999999999998   899999999999999999999999999997


Q ss_pred             eccCCCcc-eeeccccCcCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccccc
Q 035655          497 LFDHGKIS-HTTNVVGTIGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV  573 (670)
Q Consensus       497 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  573 (670)
                      ........ ......|+..|+|||.+....  ++.++||||||++++|+++|+.||......  ......... ......
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~-~~~~~~  233 (272)
T cd06629         157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI--AAMFKLGNK-RSAPPI  233 (272)
T ss_pred             cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH--HHHHHhhcc-ccCCcC
Confidence            65432211 123456889999999987654  789999999999999999999999643321  111111111 111111


Q ss_pred             CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       574 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ++    .........+.+++..||+++|.+||++++|+++
T Consensus       234 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         234 PP----DVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             Cc----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            11    1212234677889999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-34  Score=303.94  Aligned_cols=239  Identities=24%  Similarity=0.287  Sum_probs=201.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~  419 (670)
                      ....|+..+.||+|.||.||+++.+.                   ....+.+|+++|+++. |||||.+.+.++.....+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            34568888999999999999998754                   1247789999999998 999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC----CcEEEEeecCc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD----MNARLGDFGLA  495 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~----~~~kL~DFGla  495 (670)
                      +|||++.||.|.+.|...   .+++.....++.|++.++.|||+   .+|+||||||+|+|+...    +.+|++|||++
T Consensus       113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla  186 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA  186 (382)
T ss_pred             EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence            999999999999999766   39999999999999999999999   999999999999999643    47999999999


Q ss_pred             eeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      .....  .......+||+.|+|||++....|+...||||+|+++|.|++|..||..+.......   ....++      .
T Consensus       187 ~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~---~i~~~~------~  255 (382)
T KOG0032|consen  187 KFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL---AILRGD------F  255 (382)
T ss_pred             eEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH---HHHcCC------C
Confidence            98776  345667899999999999999999999999999999999999999998754222111   111111      1


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ....+......+.+.+++..|+..||.+|+++.++++|-|
T Consensus       256 ~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW  295 (382)
T KOG0032|consen  256 DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW  295 (382)
T ss_pred             CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence            2333344455677888999999999999999999999854

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.5e-33  Score=296.06  Aligned_cols=237  Identities=23%  Similarity=0.381  Sum_probs=191.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ++|+..+.||.|++|.||+|....                ..+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            468899999999999999987532                2456788999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|.+++.+.   .+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++........ .
T Consensus        99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~  171 (296)
T cd06655          99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-K  171 (296)
T ss_pred             CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc-c
Confidence            999999998543   58999999999999999999999   8999999999999999999999999999876544321 1


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .....++..|+|||.+.+..++.++|||||||++|||++|+.||........  ........ .     +.+  ..+...
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~--~~~~~~~~-~-----~~~--~~~~~~  241 (296)
T cd06655         172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLIATNG-T-----PEL--QNPEKL  241 (296)
T ss_pred             CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhcC-C-----ccc--CCcccC
Confidence            2334688999999999988899999999999999999999999976432111  11111110 0     001  011122


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...+.+++.+||+.+|.+||++.+++++=.
T Consensus       242 ~~~~~~li~~~l~~dp~~Rpt~~~il~~~~  271 (296)
T cd06655         242 SPIFRDFLNRCLEMDVEKRGSAKELLQHPF  271 (296)
T ss_pred             CHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence            345778899999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.2e-34  Score=294.39  Aligned_cols=239  Identities=24%  Similarity=0.396  Sum_probs=191.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|++.+.||+|+||.||++....                ..+.|.+|++++++++||||+++++.+..+...++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            4678889999999999999998643                235688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.+.. ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++....... .
T Consensus        84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~  158 (280)
T cd06611          84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-Q  158 (280)
T ss_pred             cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccc-c
Confidence            99999999986643 369999999999999999999998   899999999999999999999999999987543322 2


Q ss_pred             eeeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          505 HTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ......++..|+|||.+.     ...++.++||||||+++|||++|+.||......  ....... ...     .+.+. 
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--~~~~~~~-~~~-----~~~~~-  229 (280)
T cd06611         159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--RVLLKIL-KSE-----PPTLD-  229 (280)
T ss_pred             ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--HHHHHHh-cCC-----CCCcC-
Confidence            223456899999999874     345678999999999999999999999753321  1111111 110     11110 


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                       .+......+.+++..||+.+|.+||++.+++++-
T Consensus       230 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~  263 (280)
T cd06611         230 -QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHP  263 (280)
T ss_pred             -CcccCCHHHHHHHHHHhccChhhCcCHHHHhcCh
Confidence             1112234577889999999999999999999863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-34  Score=301.21  Aligned_cols=238  Identities=25%  Similarity=0.297  Sum_probs=191.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|++|.||++....                   ..+.+.+|++++++++||||+++++.+......++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            468889999999999999997643                   2245778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++.......+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.++|+|||++.......
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  157 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP  157 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence            99999999999976555679999999999999999999998   899999999999999999999999999987553321


Q ss_pred             cc----------------------------eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Q 035655          503 IS----------------------------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF  554 (670)
Q Consensus       503 ~~----------------------------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~  554 (670)
                      ..                            ......||..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~  237 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR  237 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence            10                            01124688999999999988899999999999999999999999975332


Q ss_pred             hhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCC----HHHHHHH
Q 035655          555 ILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT----MRQVLRY  613 (670)
Q Consensus       555 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs----~~evl~~  613 (670)
                      .. .+ ....         ...............+.+++.+||+.+|.+||+    ++|++++
T Consensus       238 ~~-~~-~~~~---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         238 DE-TF-SNIL---------KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             HH-HH-HHHh---------cCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            11 11 0000         111100011113467889999999999999999    7777775

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=7.3e-34  Score=329.73  Aligned_cols=244  Identities=23%  Similarity=0.361  Sum_probs=188.7

Q ss_pred             hHHHhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec--c
Q 035655          356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--K  415 (670)
Q Consensus       356 ~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--~  415 (670)
                      +.....++|.+.++||+|+||.||++....                  ....|..|+.+|++|+||||+++++++..  .
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence            334456789999999999999999987533                  23568899999999999999999998854  4


Q ss_pred             CeeEEEEeccCCCCchhhcccCC--ccccCHHHHHHHHHHHHHHhhhccccc----cceEEecccCCCcEEecCC-----
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEW----EQVVIHRDVKSGNVLIDAD-----  484 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~----~~~ivHrDIkp~NILld~~-----  484 (670)
                      ..++|||||+++|+|.++|....  ...+++..++.|+.||+.||.|||+..    .++|+||||||+||||+.+     
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence            56899999999999999996532  246999999999999999999999732    1459999999999999642     


Q ss_pred             ------------CcEEEEeecCceeccCCCcceeeccccCcCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCC
Q 035655          485 ------------MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART--GKASCSTDVFAYGVLLLEIATGRRPID  550 (670)
Q Consensus       485 ------------~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~el~tG~~pf~  550 (670)
                                  ..+||+|||++.......  ......||+.|+|||++.+  ..++.++|||||||++|||++|+.||.
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~  244 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH  244 (1021)
T ss_pred             cccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                        348999999998654332  2234579999999998854  458899999999999999999999997


Q ss_pred             CCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          551 SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       551 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .... .......... .       +.+..   ......+.+|+..||+.+|.+||++.|++++
T Consensus       245 ~~~~-~~qli~~lk~-~-------p~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        245 KANN-FSQLISELKR-G-------PDLPI---KGKSKELNILIKNLLNLSAKERPSALQCLGY  295 (1021)
T ss_pred             cCCc-HHHHHHHHhc-C-------CCCCc---CCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence            5321 1111111111 1       11110   1123557889999999999999999999964

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=9.4e-34  Score=297.91  Aligned_cols=248  Identities=21%  Similarity=0.295  Sum_probs=188.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|...++||+|+||.||+|....                 ....+.+|+.++++++||||+++++++...+..++|+||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            468889999999999999997642                 123577899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      ++ ++|.+++.+.. ..+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||++........ 
T Consensus        86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-  159 (301)
T cd07873          86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-  159 (301)
T ss_pred             cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-
Confidence            97 59999886543 358999999999999999999998   8999999999999999999999999999975443221 


Q ss_pred             eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHh------------hcCCcc
Q 035655          505 HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQ------------HLGQVL  570 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~------------~~~~~~  570 (670)
                      ......+++.|+|||.+.+. .++.++|||||||+++||++|+.||...... .........            ......
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (301)
T cd07873         160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK  239 (301)
T ss_pred             cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence            12234578899999987654 5788999999999999999999999764321 111110000            000000


Q ss_pred             cccCCCCCCcc----cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          571 DVVDPNLGSSY----VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       571 ~~~d~~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..-.+.....+    .......+.+++.+|++.||.+|||++|++++-+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~  288 (301)
T cd07873         240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY  288 (301)
T ss_pred             ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence            00001111111    0112345678999999999999999999998644

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-35  Score=317.47  Aligned_cols=236  Identities=28%  Similarity=0.422  Sum_probs=195.6

Q ss_pred             ccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++..++||+|+||+||||.+-.                     ...++.+|+.+|.+|+|||+++|+|+|.... +.||.
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            3456899999999999997621                     3578899999999999999999999998876 89999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      +||+.|+|.+|++.++ ..+.-+..+.|+.|||+||.|||+   ++++||||.++|||+.+-..+||.|||+++....+.
T Consensus       777 q~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~  852 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE  852 (1177)
T ss_pred             HhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence            9999999999998764 478889999999999999999998   999999999999999999999999999999887765


Q ss_pred             cceee-ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          503 ISHTT-NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       503 ~~~~~-~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      ..... ...-.+.|||-|.+....++.++|||||||.+||++| |.+|++......+   ..+.+.+.         +-.
T Consensus       853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI---~dlle~ge---------RLs  920 (1177)
T KOG1025|consen  853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI---PDLLEKGE---------RLS  920 (1177)
T ss_pred             ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh---hHHHhccc---------cCC
Confidence            43332 2234568999999999999999999999999999999 9999986332111   11111111         123


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .++-....+..++..||..|+..||+++++...+..
T Consensus       921 qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~  956 (1177)
T KOG1025|consen  921 QPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR  956 (1177)
T ss_pred             CCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence            344455678889999999999999999999987764

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-34  Score=295.02  Aligned_cols=253  Identities=26%  Similarity=0.340  Sum_probs=193.0

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-----------hHHHHHHHHHHHhc--cccCceeeeeeeeecc----CeeEEEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-----------RMREFAAEIESLGR--LRHKHLVNLQGWCKRK----RDLLLVY  422 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~L~~--l~H~nIv~l~g~~~~~----~~~~lV~  422 (670)
                      ..++....+.||+|.||.||+|.+..           +.+.+.+|.++.+.  |||+||+.+++.-..+    .+++||.
T Consensus       209 iarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT  288 (513)
T KOG2052|consen  209 IARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT  288 (513)
T ss_pred             hhheeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence            44678888999999999999998866           46778888888775  6999999999876543    3689999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcccc-----ccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE-----WEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-----~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      +|.++|||.|||..   ..++.+..++++..+|.||++||.+     .++.|.|||||+.|||+..++.+.|+|+|||..
T Consensus       289 dYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~  365 (513)
T KOG2052|consen  289 DYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  365 (513)
T ss_pred             ecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence            99999999999965   4699999999999999999999985     378899999999999999999999999999987


Q ss_pred             ccCCCcc---eeeccccCcCCCCccccccCC------CCccchhHHHHHHHHHHHhC----------CCCCCC---Ccch
Q 035655          498 FDHGKIS---HTTNVVGTIGYIAPELARTGK------ASCSTDVFAYGVLLLEIATG----------RRPIDS---DHFI  555 (670)
Q Consensus       498 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~t~ksDV~S~Gvvl~el~tG----------~~pf~~---~~~~  555 (670)
                      .......   .....+||.+|||||++...-      .-..+||||||.|+||++..          +.||.+   .++.
T Consensus       366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs  445 (513)
T KOG2052|consen  366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS  445 (513)
T ss_pred             ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence            7654321   234569999999999986431      12469999999999999873          245543   1111


Q ss_pred             hHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCC
Q 035655          556 LVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDEL  619 (670)
Q Consensus       556 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  619 (670)
                      .. -........++...++.+.   ...+.+..+.+++..||..+|..|-|+-.+-+.|.+...
T Consensus       446 ~e-eMrkVVCv~~~RP~ipnrW---~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  446 FE-EMRKVVCVQKLRPNIPNRW---KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             HH-HHhcceeecccCCCCCccc---ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            11 1111111122222222222   234567888999999999999999999988888875543

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.3e-33  Score=294.22  Aligned_cols=239  Identities=25%  Similarity=0.405  Sum_probs=189.4

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      +|+..+.||+|+||.||++....                 ....+.+|+.++++++||||+++++.+...+..++|+||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            57788999999999999997642                 1356889999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCC-ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          426 PNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       426 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      ++++|.+++.... ...+++..+..++.|++.||.|||+  +.+++||||||+||+++.++.+||+|||++......   
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---  156 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS---  156 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---
Confidence            9999999986532 2368999999999999999999996  258999999999999999999999999998765332   


Q ss_pred             eeeccccCcCCCCccccccCC------CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          505 HTTNVVGTIGYIAPELARTGK------ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~------~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ......++..|+|||.+.+..      ++.++|||||||+++||++|+.||.........  ....   .......+.+ 
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~--~~~~---~~~~~~~~~~-  230 (286)
T cd06622         157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF--AQLS---AIVDGDPPTL-  230 (286)
T ss_pred             ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH--HHHH---HHhhcCCCCC-
Confidence            123346888999999886543      478999999999999999999999753221111  1110   0111111112 


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                         +......+.+++.+||+.+|.+||++++++++-+
T Consensus       231 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~  264 (286)
T cd06622         231 ---PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW  264 (286)
T ss_pred             ---CcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence               2224456778999999999999999999998643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-34  Score=294.88  Aligned_cols=247  Identities=26%  Similarity=0.332  Sum_probs=191.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|+..+.||+|+||.||+|....                  ..+.+.+|++++++++|+||+++++++..++..++|+|
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            368889999999999999997643                  12467899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |++++.|..++...  ..+++.++..++.||+.||.|||+   .+++||||+|+||++++++.+||+|||++........
T Consensus        81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~  155 (288)
T cd07833          81 YVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA  155 (288)
T ss_pred             cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence            99987777665433  358999999999999999999998   8999999999999999999999999999987655443


Q ss_pred             ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHH-h------------hcCCc
Q 035655          504 SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEF-Q------------HLGQV  569 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~-~------------~~~~~  569 (670)
                      .......++..|+|||++.+. .++.++||||||++++||++|+.||.........+.... .            .....
T Consensus       156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd07833         156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF  235 (288)
T ss_pred             ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence            233445788999999999887 789999999999999999999999975432111110000 0            00000


Q ss_pred             c--cccCCCCC----CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 L--DVVDPNLG----SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ~--~~~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .  ...+....    ..++......+.+++.+||+.+|++||++++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            0  00000000    01112235778999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-33  Score=317.15  Aligned_cols=252  Identities=21%  Similarity=0.300  Sum_probs=184.3

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------------------------hHHHHHHHHHHHhccccCce
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------------------------RMREFAAEIESLGRLRHKHL  405 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------------------~~~~f~~Ei~~L~~l~H~nI  405 (670)
                      ..++|++.++||+|+||+||++....                                  ....+.+|+.+|++++||||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            35689999999999999999875321                                  12356789999999999999


Q ss_pred             eeeeeeeeccCeeEEEEeccCCCCchhhcccCC---ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec
Q 035655          406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE---NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID  482 (670)
Q Consensus       406 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld  482 (670)
                      +++++++...+..++|+|++. ++|.+++....   .......+...++.||+.||.|||+   ++|+||||||+|||++
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~  301 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLN  301 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEC
Confidence            999999999999999999984 57777764422   1223456677899999999999998   8999999999999999


Q ss_pred             CCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCC-CCCCcchhHHHHH
Q 035655          483 ADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP-IDSDHFILVDWVL  561 (670)
Q Consensus       483 ~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~p-f~~~~~~~~~~~~  561 (670)
                      .++.+||+|||+++..............||..|+|||++.+..++.++|||||||++|||++|..+ +............
T Consensus       302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~  381 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL  381 (501)
T ss_pred             CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence            999999999999987765443334456799999999999999999999999999999999998754 4322111100000


Q ss_pred             HHhh-cCC-----------cccccCCC-C--CCcccH------HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          562 EFQH-LGQ-----------VLDVVDPN-L--GSSYVV------AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       562 ~~~~-~~~-----------~~~~~d~~-l--~~~~~~------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .... ...           +.+.++.. +  ......      .....+.+++.+|++.||.+||++.|++++-.
T Consensus       382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~  456 (501)
T PHA03210        382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL  456 (501)
T ss_pred             HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence            0000 000           00000000 0  000000      01234567788999999999999999998643

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.9e-34  Score=303.92  Aligned_cols=244  Identities=22%  Similarity=0.348  Sum_probs=184.9

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----  415 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----  415 (670)
                      ...++|...+.||+|+||.||++....                  ..+.+.+|+++|++++||||+++++++...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            446789999999999999999997532                  124567899999999999999999987543     


Q ss_pred             -CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          416 -RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       416 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                       ...++++|++ +++|.+++..   ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~  164 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGL  164 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCcc
Confidence             3578999988 7899888743   358999999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcC-----
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLG-----  567 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~-----  567 (670)
                      ++.....    .....||+.|+|||++.+ ..++.++|||||||+++||++|+.||...... ............     
T Consensus       165 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  240 (343)
T cd07878         165 ARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVL  240 (343)
T ss_pred             ceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            9865432    234578999999999876 56889999999999999999999999753321 000000000000     


Q ss_pred             ---------CcccccCCCCCCc----ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          568 ---------QVLDVVDPNLGSS----YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       568 ---------~~~~~~d~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                               ...... +.....    ........+.+++..|++.||.+|||+.|+++|-
T Consensus       241 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp  299 (343)
T cd07878         241 KKISSEHARKYIQSL-PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP  299 (343)
T ss_pred             HhcchhhHHHHhhcc-ccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence                     000000 000000    0001123467899999999999999999999874

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.2e-33  Score=294.97  Aligned_cols=244  Identities=23%  Similarity=0.291  Sum_probs=190.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeecc--CeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~lV~  422 (670)
                      ++|...++||.|++|.||++....                 ....+.+|++++++++||||++++++|...  +.+++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            468889999999999999998743                 235688999999999999999999988643  4689999


Q ss_pred             eccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          423 DYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       423 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||+++++|.+++..  .....+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            99999999998754  223458999999999999999999998   8999999999999999999999999999875433


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc---hhHHHHHHHhhcCCcccccCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF---ILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~---~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ..   .....++..|+|||.+.+..++.++|||||||++|||++|+.||.....   ...+....... ..... .....
T Consensus       158 ~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~  232 (287)
T cd06621         158 SL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN-MPNPE-LKDEP  232 (287)
T ss_pred             cc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc-CCchh-hccCC
Confidence            22   1234678899999999988999999999999999999999999976421   11111111111 01111 11111


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .  ........+.+++.+||+.+|.+||++.|++++-+
T Consensus       233 ~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~  268 (287)
T cd06621         233 G--NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW  268 (287)
T ss_pred             C--CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence            0  00122456889999999999999999999998644

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=6.7e-34  Score=296.00  Aligned_cols=245  Identities=29%  Similarity=0.385  Sum_probs=189.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|+..++||+|+||.||+|....                  ..+.+.+|++++++++||||+++++++..++..++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            468889999999999999998743                  12457789999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++++|+++....  ..++|.+++.++.||+.||+|||+   .+++|+||+|+||++++++.+||+|||++....... 
T Consensus        81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-  154 (286)
T cd07846          81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-  154 (286)
T ss_pred             cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence            99999998876543  348999999999999999999998   899999999999999999999999999998664433 


Q ss_pred             ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcc------------
Q 035655          504 SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVL------------  570 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~------------  570 (670)
                      .......++..|+|||++.+ ..++.++||||||++++||++|+.||...... ..+.......+...            
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (286)
T cd07846         155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNPL  233 (286)
T ss_pred             cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccchH
Confidence            22233467899999998865 45788999999999999999999998753321 11110000000000            


Q ss_pred             --cccCCCCCCc-----ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 --DVVDPNLGSS-----YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 --~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                        ....+.....     ........+.+++.+||+.+|.+||++++++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence              0000110000     011234668899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=1.1e-33  Score=294.29  Aligned_cols=245  Identities=27%  Similarity=0.332  Sum_probs=187.8

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|++|.||+|+...                  ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            47888999999999999997642                  124688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +. ++|.+++.......+++..+..++.|++.||+|||+   .+++||||+|+||+++.++.+||+|||++....... .
T Consensus        81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~  155 (284)
T cd07860          81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-R  155 (284)
T ss_pred             cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-c
Confidence            95 689999876655679999999999999999999998   899999999999999999999999999987654322 1


Q ss_pred             eeeccccCcCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC--------
Q 035655          505 HTTNVVGTIGYIAPELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP--------  575 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~--------  575 (670)
                      ......++..|+|||++.+.. ++.++|||||||+++||++|+.||........ ........+.......+        
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07860         156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDEVVWPGVTSLPDY  234 (284)
T ss_pred             ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhhhhHHHHH
Confidence            123335788999999887644 58899999999999999999999976432110 00000000000000000        


Q ss_pred             -----CC-CC---cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          576 -----NL-GS---SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       576 -----~l-~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                           .. ..   .........+.+++.+||+.||.+||++++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence                 00 00   0001122456789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-34  Score=293.60  Aligned_cols=241  Identities=27%  Similarity=0.402  Sum_probs=191.1

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccC------
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKR------  416 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~------  416 (670)
                      .++++|+..+.||+|++|.||+|....               ..+++.+|+.+++++ +|+||+++++++....      
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            357889999999999999999998743               235788999999999 6999999999997644      


Q ss_pred             eeEEEEeccCCCCchhhcccCC--ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                      ..++||||+++++|.+++....  +..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCcc
Confidence            4899999999999999986533  4578999999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCc
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELART-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV  569 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~  569 (670)
                      +....... .......|+..|+|||.+..     ..++.++|||||||+++||++|+.||...... .. ....      
T Consensus       160 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~-~~~~------  230 (275)
T cd06608         160 SAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RA-LFKI------  230 (275)
T ss_pred             ceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HH-HHHh------
Confidence            87654322 22334568999999998753     34678999999999999999999999753211 00 0010      


Q ss_pred             ccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .....+.+.  ......+.+.+++.+||..||.+||++.|++++
T Consensus       231 ~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         231 PRNPPPTLK--SPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             hccCCCCCC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            111111111  112234577899999999999999999999874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=5.4e-34  Score=291.56  Aligned_cols=235  Identities=24%  Similarity=0.426  Sum_probs=191.4

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|+||.||++....                  ..+.+.+|++++++++|+||+++++.+......++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            47788999999999999987643                  234678999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceeccCCCc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFDHGKI  503 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~~~~  503 (670)
                      +++++|.+++.+.....+++..+..++.|+++||.|||+   .+++|+||||+||++++++ .+||+|||.+....... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-  156 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM-  156 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence            999999999976655568999999999999999999998   8999999999999999886 46999999997664322 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      .......|++.|+|||+..+..++.++||||||++++||++|+.||.....  ..+...... ...    .+     ...
T Consensus       157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~-~~~----~~-----~~~  224 (257)
T cd08225         157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL--HQLVLKICQ-GYF----AP-----ISP  224 (257)
T ss_pred             ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHhc-ccC----CC-----CCC
Confidence            122334688999999999888899999999999999999999999975321  222222111 111    11     111


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .....+.+++.+||+.+|++||++.+++++
T Consensus       225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         225 NFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            223567888999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=3e-33  Score=285.94  Aligned_cols=233  Identities=26%  Similarity=0.444  Sum_probs=189.2

Q ss_pred             CccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      +|+..+.||+|++|.||+|....                     ..+.+.+|+.++++++|+||+++.+++......+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            36677899999999999997642                     225688999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +||+++++|.+++.+.  ..+++..+..++.|++.||+|||+   .+++|+||+|+||+++.++.+||+|||++......
T Consensus        81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~  155 (258)
T cd06632          81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF  155 (258)
T ss_pred             EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence            9999999999999654  358999999999999999999998   89999999999999999999999999998865443


Q ss_pred             CcceeeccccCcCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .  ......|+..|++||.+.... ++.++|+||||++++||++|+.||......  ............     +    .
T Consensus       156 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~-----~----~  222 (258)
T cd06632         156 S--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV--AAVFKIGRSKEL-----P----P  222 (258)
T ss_pred             c--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH--HHHHHHHhcccC-----C----C
Confidence            2  223456889999999987766 899999999999999999999999754311  111111111111     1    1


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .+......+.+++.+||+.+|.+||++.+++++
T Consensus       223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence            111223566788999999999999999999874

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-35  Score=309.22  Aligned_cols=239  Identities=25%  Similarity=0.371  Sum_probs=193.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      +.|.++..||.|+||+|||+..+.                ...+|.-||++|..+.||+||+|++.+...+.++++.|||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            446678889999999999998754                3467889999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      .||..+.++..-++ .|++.++.-++.|++.||.|||+   +.|||||||+.|||++-+|.++|+|||.+..... ....
T Consensus       112 ~GGAVDaimlEL~r-~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qk  186 (1187)
T KOG0579|consen  112 GGGAVDAIMLELGR-VLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQK  186 (1187)
T ss_pred             CCchHhHHHHHhcc-ccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchh-HHhh
Confidence            99999999876543 79999999999999999999999   9999999999999999999999999999753322 2234


Q ss_pred             eeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          506 TTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      ...+.||+.|||||++.     ..+|++++||||||+.|.||..+.+|-..-..-   .+.-......     .|.|.  
T Consensus       187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM---RVllKiaKSe-----PPTLl--  256 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM---RVLLKIAKSE-----PPTLL--  256 (1187)
T ss_pred             hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH---HHHHHHhhcC-----CCccc--
Confidence            45679999999999764     468999999999999999999999996542211   1111111111     22221  


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .+..-...+.+++..||.+||..||+..++++|-.
T Consensus       257 qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpf  291 (1187)
T KOG0579|consen  257 QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPF  291 (1187)
T ss_pred             CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence            11222356778888999999999999999999754

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=7.2e-34  Score=295.64  Aligned_cols=245  Identities=25%  Similarity=0.303  Sum_probs=185.0

Q ss_pred             CccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|+||.||+++....                  ...+.+|++++++++||||+++++++.+.+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            477889999999999999976431                  23567899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      ++ ++|.+++.... ..+++..++.++.||++||.|||+   .+++||||||+||+++.++.+||+|||+++...... .
T Consensus        81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~  154 (284)
T cd07839          81 CD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-R  154 (284)
T ss_pred             CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-C
Confidence            97 58888876543 358999999999999999999998   899999999999999999999999999998654322 1


Q ss_pred             eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC--------cccccC-
Q 035655          505 HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ--------VLDVVD-  574 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~d-  574 (670)
                      ......++..|+|||++.+. .++.++|||||||+++||++|+.|+.................+.        .....+ 
T Consensus       155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07839         155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY  234 (284)
T ss_pred             CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence            12234678899999988764 46899999999999999999999864322111110000000000        000000 


Q ss_pred             ---CCCCC-----cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          575 ---PNLGS-----SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       575 ---~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                         +....     .........+.+++..||+.||.+|||+++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence               00000     1111234567889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=4.6e-34  Score=290.80  Aligned_cols=246  Identities=25%  Similarity=0.300  Sum_probs=188.9

Q ss_pred             cCccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCc-eeeeeeeeeccC------
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKH-LVNLQGWCKRKR------  416 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~n-Iv~l~g~~~~~~------  416 (670)
                      ..|...++||+|.||+||+|+....                  -..-.+|+.+|++|+|+| |++|.+++...+      
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            4566678899999999999986541                  123469999999999999 999999998877      


Q ss_pred             eeEEEEeccCCCCchhhcccCCc--cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                      .+++|+||+. -+|..++.....  ..++...+..++.||+.||+|||+   ++|+||||||+|||++++|.+||+|||+
T Consensus        91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGl  166 (323)
T KOG0594|consen   91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGL  166 (323)
T ss_pred             eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccch
Confidence            7899999995 599999976543  357778999999999999999999   9999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccccc
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV  573 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  573 (670)
                      |+...-.. ...+..++|..|.|||++.+. .|+...||||+||++.||++++.-|.++.. ......-+...+..-+..
T Consensus       167 Ara~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~lGtP~e~~  244 (323)
T KOG0594|consen  167 ARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRLLGTPNEKD  244 (323)
T ss_pred             HHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHHcCCCCccC
Confidence            99665433 224556889999999998876 689999999999999999999988876432 111111111111111111


Q ss_pred             CC----------CCCCc-----ccHH---HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          574 DP----------NLGSS-----YVVA---EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       574 d~----------~l~~~-----~~~~---~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      -|          .....     ....   ......+++.+|++.+|.+|.|++.+++|
T Consensus       245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            01          00000     0011   11356788999999999999999999986

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.9e-33  Score=289.67  Aligned_cols=235  Identities=23%  Similarity=0.373  Sum_probs=185.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeecc--Cee
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDL  418 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~  418 (670)
                      ++|+..+.||+|+||.||++....                     ..+.+.+|+.++++++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            578889999999999999987532                     124577899999999999999999988764  468


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||+++++|.+++...  ..+++...++++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++..
T Consensus        82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence            8999999999999998654  347889999999999999999998   89999999999999999999999999998755


Q ss_pred             cCCCc--ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          499 DHGKI--SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       499 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      .....  .......|+..|+|||.+.+..++.++|||||||++|||++|+.||........  ...... .    ...  
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~~-~----~~~--  227 (265)
T cd06652         157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--IFKIAT-Q----PTN--  227 (265)
T ss_pred             ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--HHHHhc-C----CCC--
Confidence            43211  112334688999999999888899999999999999999999999975321111  011100 0    011  


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                        ...+......+.+++..|+. +|.+||++++++++
T Consensus       228 --~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         228 --PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             --CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence              12233344566777888884 89999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.1e-33  Score=292.10  Aligned_cols=245  Identities=26%  Similarity=0.335  Sum_probs=190.6

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|+||.||+|....                  ....+.+|+.++++++||||+++++++......++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            47788999999999999997632                  135688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      + +++|.+++.... ..+++.+++.++.||++||.|||+   .+++|+||||+||+++.++.++|+|||++.........
T Consensus        81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~  155 (286)
T cd07832          81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR  155 (286)
T ss_pred             c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence            9 999999986544 469999999999999999999998   89999999999999999999999999999876554322


Q ss_pred             eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCc--------------
Q 035655          505 HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV--------------  569 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~--------------  569 (670)
                      ......++..|+|||.+.+. .++.++||||+||+++||++|+.||..... ...+.......+..              
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (286)
T cd07832         156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIVFRTLGTPNEETWPGLTSLPDY  234 (286)
T ss_pred             ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHHHHHcCCCChHHHhhccCcchh
Confidence            23345789999999988654 468999999999999999999888765321 11111111110000              


Q ss_pred             ccccCCCCC----CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 LDVVDPNLG----SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ~~~~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .....+...    .....+....+.+++.+|++.+|.+||+++++++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000000000    00111234678899999999999999999999986

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=2.6e-33  Score=290.85  Aligned_cols=232  Identities=27%  Similarity=0.431  Sum_probs=188.9

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      -|+..+.||+|+||.||+|....                 ..+.+.+|+.++++++||||+++++++..++..++|+||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            36678899999999999997532                 2246788999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|.+++..   ..+++..+..++.|++.+|.|||+   .+++|+||||+||+++.++.++|+|||++....... ..
T Consensus        85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~  157 (277)
T cd06641          85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IK  157 (277)
T ss_pred             CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccch-hh
Confidence            99999999854   358999999999999999999998   999999999999999999999999999987654322 11


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .....++..|+|||.+.+..++.++|||||||+++||++|..||.......  ...... ...     .+.+    ....
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~-~~~-----~~~~----~~~~  225 (277)
T cd06641         158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--VLFLIP-KNN-----PPTL----EGNY  225 (277)
T ss_pred             hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--HHHHHh-cCC-----CCCC----Cccc
Confidence            233468889999999988889999999999999999999999997532211  111111 110     1111    1223


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ...+.+++.+||+.+|.+||++.+++++
T Consensus       226 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         226 SKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            3567789999999999999999999996

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=3.8e-33  Score=291.61  Aligned_cols=248  Identities=21%  Similarity=0.246  Sum_probs=185.8

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++++|...+.||+|+||.||+|....                 ....+.+|+.++++++|+||+++.+++..++..++|+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            56789999999999999999997532                 1235778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+. ++|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++++||+|||+++......
T Consensus        83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  157 (291)
T cd07870          83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS  157 (291)
T ss_pred             eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence            9995 67777765443 357888999999999999999998   899999999999999999999999999997543322


Q ss_pred             cceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHH--HHHHHhh------------cC
Q 035655          503 ISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVD--WVLEFQH------------LG  567 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~--~~~~~~~------------~~  567 (670)
                       .......++..|+|||.+.+. .++.++|||||||+++||++|+.||+........  ..+....            ..
T Consensus       158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (291)
T cd07870         158 -QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP  236 (291)
T ss_pred             -CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence             112234578999999988754 5788999999999999999999999753321111  0110000            00


Q ss_pred             CcccccCCC-CCCcc---c--HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          568 QVLDVVDPN-LGSSY---V--VAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       568 ~~~~~~d~~-l~~~~---~--~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .......+. .....   .  ......+.+++.+|++.||.+|||++|++.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence            000000000 00000   0  0113466788999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-33  Score=291.98  Aligned_cols=246  Identities=25%  Similarity=0.338  Sum_probs=185.7

Q ss_pred             cCccccceEeeeCceeEEEeeccch-----------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~-----------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..+.||+|++|.||+|..+..                 ...+.+|++++++++|+||+++++++.+++..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            5788899999999999999976421                 23467899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++ +|.+++.+... .+++.....++.|+++||.|||+   .+++||||||+||+++.++.+||+|||+++...... .
T Consensus        85 ~~~-~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~  158 (291)
T cd07844          85 LDT-DLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-K  158 (291)
T ss_pred             CCC-CHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCC-c
Confidence            984 99998876543 68999999999999999999998   899999999999999999999999999987543221 1


Q ss_pred             eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccccc----------
Q 035655          505 HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV----------  573 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~----------  573 (670)
                      ......++..|+|||++.+ ..++.++||||+|++++||++|+.||.................+......          
T Consensus       159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (291)
T cd07844         159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF  238 (291)
T ss_pred             cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence            1122356889999998865 45789999999999999999999999653311111100000000000000          


Q ss_pred             ---------CCCCCCcc-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          574 ---------DPNLGSSY-VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       574 ---------d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                               ...+.... .......+.+++..|++.+|.+||++.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence                     00000000 00012567789999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.8e-34  Score=303.75  Aligned_cols=227  Identities=24%  Similarity=0.279  Sum_probs=176.1

Q ss_pred             EeeeCceeEEEeeccch-------------------HHHHHHHHHHHhcc---ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          370 IGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRL---RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~l---~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ||+|+||.||+++....                   ...+..|..++.++   +||||+++++++.+....++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999976431                   12234566666665   699999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++.+.  ..+++..+..++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~  154 (330)
T cd05586          81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTN  154 (330)
T ss_pred             ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCcc
Confidence            9999998654  358999999999999999999998   899999999999999999999999999987543222 2233


Q ss_pred             ccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...||..|+|||++.+. .++.++|||||||++|||++|+.||.......  .. .....+.      ..+...   ...
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~--~~-~~i~~~~------~~~~~~---~~~  222 (330)
T cd05586         155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ--MY-RNIAFGK------VRFPKN---VLS  222 (330)
T ss_pred             CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH--HH-HHHHcCC------CCCCCc---cCC
Confidence            45799999999998764 47899999999999999999999997643211  11 1111111      011111   123


Q ss_pred             HHHHHHHHhhccCCCCCCC----CHHHHHHHh
Q 035655          587 ELVLQLGLLCSHQKAEARP----TMRQVLRYL  614 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RP----s~~evl~~L  614 (670)
                      ..+.+++..||+.||.+||    ++.++++|-
T Consensus       223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~  254 (330)
T cd05586         223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKEHP  254 (330)
T ss_pred             HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCc
Confidence            4567889999999999998    577777653

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.1e-33  Score=287.95  Aligned_cols=237  Identities=26%  Similarity=0.438  Sum_probs=189.8

Q ss_pred             CccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      +|+..+.||+|++|.||++....                      ..+.+.+|++++++++|+||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            47788999999999999986422                      13568899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceecc
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFD  499 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~  499 (670)
                      |+||+++++|.+++.+.  ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++ .+||+|||++....
T Consensus        81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~  155 (268)
T cd06630          81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA  155 (268)
T ss_pred             EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence            99999999999999654  368999999999999999999998   8999999999999998876 59999999997665


Q ss_pred             CCCcc---eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCC
Q 035655          500 HGKIS---HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       500 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~  575 (670)
                      .....   ......++..|+|||.+.+..++.++||||+|++++||++|+.||...... ...........         
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------  226 (268)
T cd06630         156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA---------  226 (268)
T ss_pred             cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc---------
Confidence            43211   122346889999999998888999999999999999999999999753221 11111111000         


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ......+......+.+++.+|++.+|.+||++.+++++
T Consensus       227 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         227 TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            01112233344667889999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6e-34  Score=300.46  Aligned_cols=236  Identities=21%  Similarity=0.378  Sum_probs=190.9

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      +.|++.++||+||-++||+....+                 ...-|..|+..|.+|+ |.+||+|++|-..++.+|+|||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            458889999999999999987653                 3456889999999996 8999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |= ..+|..+|.+.......| .+..+.+|++.++.++|+   .+|||.||||.|.|+- .|.+||+|||+|..+..+..
T Consensus       441 ~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT  514 (677)
T KOG0596|consen  441 CG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT  514 (677)
T ss_pred             cc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE-eeeEEeeeechhcccCcccc
Confidence            86 569999998876655667 778899999999999999   8999999999999984 57999999999998876654


Q ss_pred             c-eeeccccCcCCCCccccccC-----------CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc
Q 035655          504 S-HTTNVVGTIGYIAPELARTG-----------KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD  571 (670)
Q Consensus       504 ~-~~~~~~gt~~y~aPE~~~~~-----------~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~  571 (670)
                      . .....+||+.||+||.+...           +..+++||||+|||||+|+.|+.||..-.    .      ...++..
T Consensus       515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~----n------~~aKl~a  584 (677)
T KOG0596|consen  515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII----N------QIAKLHA  584 (677)
T ss_pred             ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH----H------HHHHHHh
Confidence            3 33457999999999977432           25689999999999999999999997411    0      1123344


Q ss_pred             ccCCCCCCcccHHH-HHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          572 VVDPNLGSSYVVAE-MELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       572 ~~d~~l~~~~~~~~-~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +.+|...-+|+.-- ...+++++..||+.||++||+..|+|+|
T Consensus       585 I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  585 ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            55554332332211 1228899999999999999999999985

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=6.1e-33  Score=284.94  Aligned_cols=237  Identities=27%  Similarity=0.454  Sum_probs=189.9

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|+||.||+|....                  ..+.+.+|++++++++|+||+++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            47788999999999999997532                  345788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++...  ..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++.........
T Consensus        81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~  155 (264)
T cd06626          81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT  155 (264)
T ss_pred             CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence            9999999999654  348899999999999999999998   89999999999999999999999999999876543322


Q ss_pred             ee---eccccCcCCCCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          505 HT---TNVVGTIGYIAPELARTGK---ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       505 ~~---~~~~gt~~y~aPE~~~~~~---~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ..   ....++..|+|||++.+..   ++.++||||||++++|+++|+.||...+..   +........    ...+.+.
T Consensus       156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~---~~~~~~~~~----~~~~~~~  228 (264)
T cd06626         156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE---FQIMFHVGA----GHKPPIP  228 (264)
T ss_pred             ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch---HHHHHHHhc----CCCCCCC
Confidence            21   1356788999999988766   889999999999999999999999753211   111111111    1111111


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..  ......+.+++.+||+.+|.+||++.+++++
T Consensus       229 ~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         229 DS--LQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             cc--cccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            11  1123556789999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-34  Score=289.53  Aligned_cols=253  Identities=24%  Similarity=0.359  Sum_probs=191.8

Q ss_pred             hHHHhhcCccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeec---
Q 035655          356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKR---  414 (670)
Q Consensus       356 ~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~---  414 (670)
                      +.......|...+.||+|+||.|+.+.....                  .+.-.+|+++|++++|+||+.+.+.+..   
T Consensus        16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~   95 (359)
T KOG0660|consen   16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR   95 (359)
T ss_pred             eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence            3344556677788999999999999987552                  2344589999999999999999998865   


Q ss_pred             --cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          415 --KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       415 --~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                        -+..|+|+|+| ..+|.+.|+.+  ..|+.....-++.|+++||.|+|+   .+|+||||||+|+|++.+...||+||
T Consensus        96 ~~f~DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DF  169 (359)
T KOG0660|consen   96 DKFNDVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDF  169 (359)
T ss_pred             cccceeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccc
Confidence              35789999999 66999998654  348999999999999999999999   99999999999999999999999999


Q ss_pred             cCceeccCCC-cceeeccccCcCCCCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHH------
Q 035655          493 GLARLFDHGK-ISHTTNVVGTIGYIAPELAR-TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEF------  563 (670)
Q Consensus       493 Gla~~~~~~~-~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~------  563 (670)
                      |+|+...... ....+..+.|..|.|||++. ...|+...||||.|||+.||++|+..|.+.+.. ......+.      
T Consensus       170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~  249 (359)
T KOG0660|consen  170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSE  249 (359)
T ss_pred             cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCH
Confidence            9999876431 23346678899999999765 467999999999999999999999999763221 11111110      


Q ss_pred             -----hhc---CCcccccCCCCCCcc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          564 -----QHL---GQVLDVVDPNLGSSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       564 -----~~~---~~~~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                           ...   .+.+....+.-...+   -+......++|+.++|..||.+|+|++|.++|-
T Consensus       250 e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP  311 (359)
T KOG0660|consen  250 EDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP  311 (359)
T ss_pred             HHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence                 000   001111111111111   112234567889999999999999999999964

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.2e-33  Score=294.84  Aligned_cols=240  Identities=27%  Similarity=0.357  Sum_probs=185.0

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|...+.||+|+||.||++....                 ....+.+|+.++.++. |+||+++++++..++..++++||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            45567889999999999987643                 2346788999999996 99999999999999999999999


Q ss_pred             cCCCCchhh---cccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          425 IPNGSLDSL---LFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       425 ~~~gsL~~~---l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      ++. +|.++   +.......+++..+.+++.|++.||+|||+  +.+++||||||+||+++.++.+||+|||+++.....
T Consensus        85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            864 55443   333334579999999999999999999997  258999999999999999999999999999755432


Q ss_pred             CcceeeccccCcCCCCccccccC---CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          502 KISHTTNVVGTIGYIAPELARTG---KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~---~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .  ......|+..|+|||.+.+.   .++.++|||||||+++||++|+.||..... ......      +......+.+.
T Consensus       162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~------~~~~~~~~~~~  232 (288)
T cd06616         162 I--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VFDQLT------QVVKGDPPILS  232 (288)
T ss_pred             C--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HHHHHh------hhcCCCCCcCC
Confidence            2  12233688999999998766   688999999999999999999999975331 111111      11111112222


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ..........+.+++.+||+.+|.+||++++|+++-
T Consensus       233 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~  268 (288)
T cd06616         233 NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP  268 (288)
T ss_pred             CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence            222223456788999999999999999999999863

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=7.5e-33  Score=291.72  Aligned_cols=239  Identities=23%  Similarity=0.253  Sum_probs=187.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                   ..+.+.+|+++++.++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            468889999999999999987543                   1345678999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++......
T Consensus        81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~  155 (305)
T cd05609          81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL  155 (305)
T ss_pred             ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence            999999999999654  358999999999999999999998   899999999999999999999999999987421110


Q ss_pred             --------------cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC
Q 035655          503 --------------ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ  568 (670)
Q Consensus       503 --------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~  568 (670)
                                    ........++..|+|||.+.+..++.++|+|||||+++||++|+.||......  +.... ...+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~--~~~~~-~~~~~  232 (305)
T cd05609         156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--ELFGQ-VISDD  232 (305)
T ss_pred             cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH-HHhcc
Confidence                          00112246788999999998888999999999999999999999999753321  11111 11111


Q ss_pred             cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       569 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                         ...+....    .....+.+++.+||+.+|.+||+..++.+.|+
T Consensus       233 ---~~~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~  272 (305)
T cd05609         233 ---IEWPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQ  272 (305)
T ss_pred             ---cCCCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence               11111111    12345788999999999999999655555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=7e-33  Score=290.42  Aligned_cols=245  Identities=26%  Similarity=0.319  Sum_probs=187.5

Q ss_pred             CccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      +|+..+.||+|+||.||+|....                     ....+..|++++++++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            47778899999999999997642                     113456899999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+ +|+|.+++.... ..+++..+.+++.||++||.|||+   .+++|+||||+||+++.++.+||+|||+++.....
T Consensus        81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~  155 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP  155 (298)
T ss_pred             Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence            9999 999999997654 369999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHh---------hcCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQ---------HLGQVL  570 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~---------~~~~~~  570 (670)
                      .. ......++..|+|||.+.+ ..++.++|||||||+++||++|..||...... .........         ......
T Consensus       156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (298)
T cd07841         156 NR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP  234 (298)
T ss_pred             Cc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence            21 2233356788999998854 45789999999999999999998777653221 111110000         000000


Q ss_pred             cccCCCCCCc-----ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 DVVDPNLGSS-----YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..........     ........+.+++..||+++|.+||+++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            0000000001     112234678899999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=7.5e-33  Score=289.47  Aligned_cols=230  Identities=26%  Similarity=0.320  Sum_probs=189.7

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                   ..+.+.+|++++++++||||+++++++..++..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            468889999999999999997643                   1245778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||+++..... 
T Consensus        81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-  154 (290)
T cd05580          81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-  154 (290)
T ss_pred             ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence            999999999999665  468999999999999999999998   99999999999999999999999999999876543 


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                         .....+++.|+|||.+.+...+.++||||||++++||++|+.||......   ........+.      ..+    +
T Consensus       155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~------~~~----~  218 (290)
T cd05580         155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI---QIYEKILEGK------VRF----P  218 (290)
T ss_pred             ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhcCC------ccC----C
Confidence               23346889999999998888899999999999999999999999764411   0111111111      111    1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARP-----TMRQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  613 (670)
                      ......+.+++..||+.+|.+||     +++|++++
T Consensus       219 ~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         219 SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence            11235677899999999999999     77888765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=2.1e-33  Score=288.78  Aligned_cols=237  Identities=25%  Similarity=0.388  Sum_probs=191.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..+.||+|+||.||++....                 ..+++.+|++++++++||||+++++.+...+..++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            357778899999999999997752                 235688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++.... ..+++..+..++.|++.||+|||+  ..+++|+||||+||+++.++.+||+|||.+........ 
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-  156 (265)
T cd06605          81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA-  156 (265)
T ss_pred             cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence            99999999997653 468999999999999999999997  36899999999999999999999999999875533221 


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc---chhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH---FILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~---~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                        ....++..|+|||++.+..++.++||||||+++++|++|+.||....   ....+......      ....+.+... 
T Consensus       157 --~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-  227 (265)
T cd06605         157 --KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV------NEPPPRLPSG-  227 (265)
T ss_pred             --hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh------cCCCCCCChh-
Confidence              12578899999999998899999999999999999999999997532   11111111111      1111111111 


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                        .....+.+++..||+.+|.+||++.+++++
T Consensus       228 --~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         228 --KFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             --hcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence              134567889999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-33  Score=289.28  Aligned_cols=234  Identities=25%  Similarity=0.459  Sum_probs=188.9

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccc---cCceeeeeeeeeccCeeEEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLR---HKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~---H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .|+..+.||+|+||.||+|....                 ...++.+|+.++++++   |||+++++++|..+...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            46778899999999999998632                 2356788999999997   999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++...   .+++..++.++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.......
T Consensus        82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06917          82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS  155 (277)
T ss_pred             ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence            999999999998543   68999999999999999999998   899999999999999999999999999998765443


Q ss_pred             cceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       .......|+..|+|||.+.++ .++.++||||||++++||++|+.||......  ....      .......+.+... 
T Consensus       156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~------~~~~~~~~~~~~~-  225 (277)
T cd06917         156 -SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--RAMM------LIPKSKPPRLEDN-  225 (277)
T ss_pred             -cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--hhhh------ccccCCCCCCCcc-
Confidence             223345789999999988754 4688999999999999999999999753321  1110      0011111222211 


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                        .....+.+++..||+.||.+||++.+++++-
T Consensus       226 --~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~  256 (277)
T cd06917         226 --GYSKLLREFVAACLDEEPKERLSAEELLKSK  256 (277)
T ss_pred             --cCCHHHHHHHHHHcCCCcccCcCHHHHhhCh
Confidence              1335678899999999999999999998854

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=3e-33  Score=286.80  Aligned_cols=233  Identities=27%  Similarity=0.319  Sum_probs=191.5

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      +|+..+.||.|+||.||++....                   ..+.+.+|++++++++||||+++++.+.++...++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            57889999999999999997642                   23577899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++++|.+++...  ..+++.++..++.|+++||.|||+   .+++|+||||+||++++++.++|+|||++....... 
T Consensus        81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-  154 (258)
T cd05578          81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-  154 (258)
T ss_pred             CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence            99999999999654  468999999999999999999998   899999999999999999999999999987654432 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                       ......|+..|+|||.+.+..++.++|+||||+++++|++|+.||........+........  ..        ...+.
T Consensus       155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~--------~~~~~  223 (258)
T cd05578         155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--AD--------VLYPA  223 (258)
T ss_pred             -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--cc--------ccCcc
Confidence             22345688899999999888899999999999999999999999986443222222221111  00        11122


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCH--HHHHH
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTM--RQVLR  612 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~--~evl~  612 (670)
                      .....+.+++.+||+.+|.+||+.  +|+++
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         224 TWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             cCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            233677889999999999999999  77654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=2.1e-33  Score=290.29  Aligned_cols=237  Identities=24%  Similarity=0.421  Sum_probs=185.0

Q ss_pred             ccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC------
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR------  416 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------  416 (670)
                      |...+.||+|+||.||+|.+..                     ..+++.+|++++++++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            4567889999999999986421                     2346789999999999999999999886432      


Q ss_pred             eeEEEEeccCCCCchhhcccC----CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          417 DLLLVYDYIPNGSLDSLLFDN----ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                      ..++++||+++|+|.+++...    ....+++...++++.|++.||+|||+   .+|+||||||+||+++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence            247899999999999887432    12358899999999999999999998   89999999999999999999999999


Q ss_pred             cCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCc
Q 035655          493 GLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQV  569 (670)
Q Consensus       493 Gla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~  569 (670)
                      |+++....... .......++..|++||.+.+..++.++|||||||+++||++ |+.||...... +..+.   ..... 
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~---~~~~~-  233 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYL---IKGNR-  233 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHH---HcCCc-
Confidence            99986543321 11223345678999999988889999999999999999999 88998753321 11111   11111 


Q ss_pred             ccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          570 LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       570 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                           ...    +......+.+++.+||+.+|.+||++.++++.|++
T Consensus       234 -----~~~----~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~  271 (273)
T cd05074         234 -----LKQ----PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL  271 (273)
T ss_pred             -----CCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence                 000    11223578899999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=2.9e-33  Score=293.30  Aligned_cols=234  Identities=21%  Similarity=0.329  Sum_probs=187.0

Q ss_pred             ccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      |.....||+|+||.||++....                ..+.+.+|+..+++++|+||+++++.+...+..++||||+++
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~  103 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG  103 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence            3334679999999999987532                234678999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|.+++..   ..+++.++..++.||+.||.|||+   .+++||||||+||+++.++.+||+|||++....... ....
T Consensus       104 ~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~  176 (292)
T cd06658         104 GALTDIVTH---TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKRK  176 (292)
T ss_pred             CcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccCc
Confidence            999998843   258999999999999999999999   899999999999999999999999999987554322 2223


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...|+..|+|||.+.+..++.++||||||++++||++|+.||........  ....      .....+.+..  ......
T Consensus       177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~------~~~~~~~~~~--~~~~~~  246 (292)
T cd06658         177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA--MRRI------RDNLPPRVKD--SHKVSS  246 (292)
T ss_pred             eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH------HhcCCCcccc--ccccCH
Confidence            35689999999999888899999999999999999999999975432111  1010      0111111111  111234


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .+.+++..|++.||.+||++++++++-
T Consensus       247 ~~~~li~~~l~~~P~~Rpt~~~il~~~  273 (292)
T cd06658         247 VLRGFLDLMLVREPSQRATAQELLQHP  273 (292)
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhhCh
Confidence            567888899999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-33  Score=303.66  Aligned_cols=227  Identities=26%  Similarity=0.370  Sum_probs=187.6

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~  419 (670)
                      ..++|...++||+|.||+|+++..+.                   ..+..+.|-+++... +||.+++|+.+|..++++|
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            45689999999999999999987654                   345566787777766 5999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||||..||++..+.+   ...+++..+.-++..|+.||+|||+   ++||+||||.+|||||.+|.+||+||||++.--
T Consensus       446 fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m  519 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM  519 (694)
T ss_pred             EEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccccC
Confidence            9999999999655543   2469999999999999999999999   999999999999999999999999999998533


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhcCCcccccCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      . ....+.+.+||+.|||||++.+..|+...|-|||||+||||+.|..||.+++. .+-+.+..          .|+   
T Consensus       520 ~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~----------d~~---  585 (694)
T KOG0694|consen  520 G-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN----------DEV---  585 (694)
T ss_pred             C-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc----------CCC---
Confidence            1 22356778999999999999999999999999999999999999999986443 22222110          112   


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCH
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTM  607 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  607 (670)
                       .|+.-...+.+.++.+.+.++|++|--+
T Consensus       586 -~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  586 -RYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             -CCCCcccHHHHHHHHHHhccCcccccCC
Confidence             2334445667788889999999999765

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=5.7e-33  Score=291.08  Aligned_cols=236  Identities=23%  Similarity=0.380  Sum_probs=191.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ++|...+.||+|+||.||++....                ..+.+.+|+.++++++||||+++++.|...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            578889999999999999997532                2356788999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|.+++.+.   .+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........ .
T Consensus        99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~  171 (293)
T cd06647          99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K  171 (293)
T ss_pred             CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-c
Confidence            999999998543   47899999999999999999998   8999999999999999999999999999876544322 2


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .....+++.|+|||.+....++.++||||||++++|+++|+.||........  .......+      .+..  ......
T Consensus       172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~--~~~~~~~~------~~~~--~~~~~~  241 (293)
T cd06647         172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLIATNG------TPEL--QNPEKL  241 (293)
T ss_pred             cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh--eeehhcCC------CCCC--CCcccc
Confidence            2334688899999999888899999999999999999999999975332100  00000000      0111  111223


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...+.+++..||+.+|.+||++.+++++-
T Consensus       242 ~~~l~~li~~~l~~~p~~Rp~~~~il~h~  270 (293)
T cd06647         242 SAIFRDFLNRCLEMDVEKRGSAKELLQHP  270 (293)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence            45678899999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=7.9e-33  Score=291.82  Aligned_cols=235  Identities=27%  Similarity=0.404  Sum_probs=187.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .+.|+..+.||+|+||.||+|....                   ..+++.+|++++++++||||+++.++|.+++..++|
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            4568888999999999999997532                   124678999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +||++ |+|.+++.... ..+++..+..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||++......
T Consensus        94 ~e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~  168 (307)
T cd06607          94 MEYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA  168 (307)
T ss_pred             HHhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence            99997 67777765433 368999999999999999999998   89999999999999999999999999998765432


Q ss_pred             CcceeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          502 KISHTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                           ....++..|+|||++.   .+.++.++||||||+++|||++|+.||..........  .... .     ..+.+.
T Consensus       169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~--~~~~-~-----~~~~~~  235 (307)
T cd06607         169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQ-N-----DSPTLS  235 (307)
T ss_pred             -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH--HHhc-C-----CCCCCC
Confidence                 2346788999999874   4568899999999999999999999987543211111  1110 0     011111


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                         .....+.+.+++.+||+.+|.+||++.+++++..-
T Consensus       236 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  270 (307)
T cd06607         236 ---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV  270 (307)
T ss_pred             ---chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence               12234568899999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=3.8e-33  Score=289.87  Aligned_cols=236  Identities=24%  Similarity=0.339  Sum_probs=182.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHH-HhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIES-LGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~-L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|++.+.||+|+||.||++....                 ...++..|+.. ++.++||||+++++++..++..++++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            468889999999999999997643                 12345566665 566789999999999999999999999


Q ss_pred             ccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccc-eEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          424 YIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ-VVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       424 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |++ |+|.+++...  ....+++..++.++.|++.||+|||+   + +++||||||+||+++.++.+||+|||++.....
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            996 6888887542  23468999999999999999999998   5 899999999999999999999999999986543


Q ss_pred             CCcceeeccccCcCCCCcccccc----CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELART----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~----~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ..  ..+...++..|+|||.+.+    ..++.++|+|||||+++||++|+.||.......... ....      ....+.
T Consensus       157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~------~~~~~~  227 (283)
T cd06617         157 SV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL-KQVV------EEPSPQ  227 (283)
T ss_pred             cc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH-HHHH------hcCCCC
Confidence            21  1233468899999998764    456889999999999999999999997422111111 1110      111111


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +..   ....+.+.+++..||+.+|.+||++++++++
T Consensus       228 ~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         228 LPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             CCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            111   1123567889999999999999999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=6.2e-33  Score=290.24  Aligned_cols=246  Identities=20%  Similarity=0.266  Sum_probs=187.6

Q ss_pred             cCccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeecc--CeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~lV  421 (670)
                      ++|+..+.||+|+||.||+|..+..                  ...+.+|+.++++++||||+++++++...  +..++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            4688889999999999999987531                  12467899999999999999999998877  889999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +||++ ++|.+++.... ..+++.+++.++.||+.||+|||+   .+++|+||||+||+++.++.+||+|||++......
T Consensus        85 ~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  159 (293)
T cd07843          85 MEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP  159 (293)
T ss_pred             ehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence            99997 59999886543 368999999999999999999998   89999999999999999999999999999866543


Q ss_pred             CcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHH-----------h----
Q 035655          502 KISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEF-----------Q----  564 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~-----------~----  564 (670)
                      . .......++..|+|||.+.+. .++.++|+||||++++||++|+.||...... ........           .    
T Consensus       160 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (293)
T cd07843         160 L-KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP  238 (293)
T ss_pred             c-cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence            2 112334578899999988754 4689999999999999999999999753211 00000000           0    


Q ss_pred             --hcCCcccccCCCCCCcccHH-HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          565 --HLGQVLDVVDPNLGSSYVVA-EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       565 --~~~~~~~~~d~~l~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                        ............+...++.. ..+.+.+++..||+.+|++||++.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence              00000001111111122222 24567889999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-33  Score=289.06  Aligned_cols=244  Identities=25%  Similarity=0.290  Sum_probs=186.8

Q ss_pred             ccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      |+..+.||+|++|.||+|....                  ..+.+.+|++++++++|||++++++++.+.+..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            5667899999999999997642                  1246789999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      + ++|.+++.......+++..+.+++.|+++||.|||+   ++++||||+|+||+++.++.+||+|||+++....... .
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~  155 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-T  155 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-c
Confidence            5 699999876654568999999999999999999998   8999999999999999999999999999976543221 1


Q ss_pred             eeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchh--HHHHHHHhhcC-----------Ccc-
Q 035655          506 TTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFIL--VDWVLEFQHLG-----------QVL-  570 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~--~~~~~~~~~~~-----------~~~-  570 (670)
                      .....++..|+|||++.+. .++.++||||||+++|||++|+.||.......  ...........           ... 
T Consensus       156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (283)
T cd07835         156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP  235 (283)
T ss_pred             cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhh
Confidence            2233568899999987654 56889999999999999999999997643211  11110000000           000 


Q ss_pred             ---cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 ---DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ---~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                         ....+.. ..........+.+++.+|++++|.+||+++|++++
T Consensus       236 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         236 TFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             hcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence               0000000 01111223567889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.8e-32  Score=278.12  Aligned_cols=235  Identities=29%  Similarity=0.466  Sum_probs=191.8

Q ss_pred             CccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      +|...+.||+|++|.||++....                ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            36778899999999999998742                23568899999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.... ..+++..+..++.|++.||.|||+   .+++||||+|+||++++++.++|+|||.+........  .
T Consensus        81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~  154 (253)
T cd05122          81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--R  154 (253)
T ss_pred             CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc--c
Confidence            999999987653 468999999999999999999998   9999999999999999999999999999987655432  3


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ....++..|+|||.+....++.++||||||+++++|++|+.||......  ........ ...     +.+..  .....
T Consensus       155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~-~~~-----~~~~~--~~~~~  224 (253)
T cd05122         155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--KALFKIAT-NGP-----PGLRN--PEKWS  224 (253)
T ss_pred             cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHHh-cCC-----CCcCc--ccccC
Confidence            3457889999999998888999999999999999999999999764211  11111111 111     11110  01113


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..+.+++..||+.||.+||++.|++++
T Consensus       225 ~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         225 DEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            567889999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=8.7e-33  Score=281.58  Aligned_cols=236  Identities=27%  Similarity=0.413  Sum_probs=193.8

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc--CeeEEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVY  422 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~lV~  422 (670)
                      +|+..+.||+|++|.||+|....                  ..+.+.+|+..+++++||||+++++++...  ...++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            46778999999999999998652                  245788999999999999999999999988  8899999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++....  .+++.++..++.|++.||+|||+   .+++|+||+|+||+++.++.+||+|||.+.......
T Consensus        81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  155 (260)
T cd06606          81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE  155 (260)
T ss_pred             EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence            9999999999997654  79999999999999999999998   899999999999999999999999999998776543


Q ss_pred             cc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 IS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      .. ......++..|+|||.+.+...+.++||||||+++++|++|+.||...... .........         .......
T Consensus       156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~---------~~~~~~~  225 (260)
T cd06606         156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-MAALYKIGS---------SGEPPEI  225 (260)
T ss_pred             ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-HHHHHhccc---------cCCCcCC
Confidence            21 123456889999999998888999999999999999999999999764411 111111111         0111112


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +......+.+++.+|++.+|.+||++.+++++
T Consensus       226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             CcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            22224678889999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-34  Score=304.47  Aligned_cols=230  Identities=27%  Similarity=0.405  Sum_probs=189.0

Q ss_pred             ceEeeeCceeEEEeeccch----------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCch
Q 035655          368 EVIGTGGFGEVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLD  431 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~~----------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~  431 (670)
                      -+||+|.||+||-|++.+.                .+-+..||..-++|+|+|||+++|.|.+++.+-+.||.+|||||.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            3799999999999987552                244668999999999999999999999999999999999999999


Q ss_pred             hhcccCCcccc--CHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec-CCCcEEEEeecCceeccCCCcceeec
Q 035655          432 SLLFDNENFVL--SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID-ADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       432 ~~l~~~~~~~l--~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld-~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      +.|+..=+ ++  .+...--+.+||++||.|||+   +.|||||||-.|+|++ -.|.+||+|||-++.... -.+.+.+
T Consensus       661 sLLrskWG-PlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TET  735 (1226)
T KOG4279|consen  661 SLLRSKWG-PLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTET  735 (1226)
T ss_pred             HHHHhccC-CCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhcc-CCccccc
Confidence            99975422 34  667777899999999999999   9999999999999996 578999999999986643 3355667


Q ss_pred             cccCcCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          509 VVGTIGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~--~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      .-||.-|||||++..++  |...+|||||||.+.||.||++||..-........    .  --+-.+.|    +.+.+..
T Consensus       736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF----k--VGmyKvHP----~iPeels  805 (1226)
T KOG4279|consen  736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF----K--VGMYKVHP----PIPEELS  805 (1226)
T ss_pred             cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh----h--hcceecCC----CCcHHHH
Confidence            88999999999998764  78899999999999999999999975221111110    0  01112223    4566677


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHH
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLR  612 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~  612 (670)
                      .+...++++|..++|.+||+++++++
T Consensus       806 aeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  806 AEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHHHcCCCcccCccHHHhcc
Confidence            88899999999999999999999987

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=6.6e-33  Score=284.46  Aligned_cols=237  Identities=24%  Similarity=0.387  Sum_probs=194.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..+.||+|++|.||++....                 ..+.+.+|++.+++++|+||+++++++...+..++|+||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            368888999999999999997653                 246788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++...  ..+++..+++++.|+++||.|||+.  .+++||||+|+||+++.++.++|+|||++.........
T Consensus        81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~  156 (264)
T cd06623          81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ  156 (264)
T ss_pred             cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence            9999999999654  4689999999999999999999962  79999999999999999999999999999876543322


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                       .....++..|+|||.+.+..++.++||||||++++||++|+.||..... ...+......  .    ...+.+    +.
T Consensus       157 -~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~----~~~~~~----~~  225 (264)
T cd06623         157 -CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC--D----GPPPSL----PA  225 (264)
T ss_pred             -ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh--c----CCCCCC----Cc
Confidence             2345688999999999988899999999999999999999999976431 1111111111  1    111111    11


Q ss_pred             H-HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          584 A-EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       584 ~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      . ..+.+.+++..||+++|.+||++.|++++
T Consensus       226 ~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         226 EEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            1 34678889999999999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=5.9e-33  Score=291.67  Aligned_cols=234  Identities=22%  Similarity=0.340  Sum_probs=186.9

Q ss_pred             ccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      |+....||+|+||.||++....                ..+.+.+|+.+++.++||||+++++.+..++..++|+||+++
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~  102 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG  102 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence            3345679999999999997532                235678999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|.+++..   ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....... ....
T Consensus       103 ~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~  175 (297)
T cd06659         103 GALTDIVSQ---TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRK  175 (297)
T ss_pred             CCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-cccc
Confidence            999998743   358999999999999999999998   899999999999999999999999999987554322 2223


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...|+..|+|||++.+..++.++|||||||+++||++|+.||........  ........      .+...  .......
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~------~~~~~--~~~~~~~  245 (297)
T cd06659         176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA--MKRLRDSP------PPKLK--NAHKISP  245 (297)
T ss_pred             ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHhccC------CCCcc--ccCCCCH
Confidence            45789999999999988899999999999999999999999975432211  11111100      01010  0111234


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .+.+++..||+.+|.+||++++++++-
T Consensus       246 ~l~~~i~~~l~~~P~~Rps~~~ll~~~  272 (297)
T cd06659         246 VLRDFLERMLTREPQERATAQELLDHP  272 (297)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence            577889999999999999999999963

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=1.2e-32  Score=288.85  Aligned_cols=241  Identities=18%  Similarity=0.250  Sum_probs=176.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccch---H---------------------------HHHHHHHHHHhccccCceeeeee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR---M---------------------------REFAAEIESLGRLRHKHLVNLQG  410 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~---~---------------------------~~f~~Ei~~L~~l~H~nIv~l~g  410 (670)
                      .++|++.++||+|+||.||+|.....   .                           .....+...+..+.|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            36799999999999999999975432   0                           01122334456678999999999


Q ss_pred             eeeccC----eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc
Q 035655          411 WCKRKR----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN  486 (670)
Q Consensus       411 ~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~  486 (670)
                      ++....    ..++++|++. .++.+.+...  ...++..+..++.|++.||+|||+   .+++||||||+|||++.++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~  164 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNR  164 (294)
T ss_pred             eeeEecCCceEEEEEEehhc-cCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCc
Confidence            876543    3477788764 3666655432  235788899999999999999998   89999999999999999999


Q ss_pred             EEEEeecCceeccCCCc------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc--hhHH
Q 035655          487 ARLGDFGLARLFDHGKI------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF--ILVD  558 (670)
Q Consensus       487 ~kL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~--~~~~  558 (670)
                      +||+|||+++.......      .......||+.|+|||+..+..++.++|||||||+++||++|+.||.....  ....
T Consensus       165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~  244 (294)
T PHA02882        165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH  244 (294)
T ss_pred             EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence            99999999986643221      111234799999999999999999999999999999999999999976421  1111


Q ss_pred             HH-HHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          559 WV-LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       559 ~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .. .+..  .++.   .+.+.   .......+.+++..|++.+|.+||++.++++.++
T Consensus       245 ~~~~~~~--~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        245 AAKCDFI--KRLH---EGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HhHHHHH--HHhh---hhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            10 0000  0000   01100   0112356788999999999999999999998763

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=1.7e-32  Score=286.29  Aligned_cols=235  Identities=20%  Similarity=0.303  Sum_probs=189.3

Q ss_pred             CccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .|...++||+|++|.||++....                ..+.+.+|+.++++++||||+++++++...+..++|+||++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~   99 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE   99 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence            34556799999999999997532                23457899999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++..   ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++.++|+|||++....... ...
T Consensus       100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~~~  172 (285)
T cd06648         100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-PRR  172 (285)
T ss_pred             CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCC-ccc
Confidence            9999999865   358999999999999999999998   899999999999999999999999999887554322 122


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ....|+..|+|||.+.+..++.++||||||++++||++|+.||......  .........      ..+...  ......
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~~~~~------~~~~~~--~~~~~~  242 (285)
T cd06648         173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKRIRDN------LPPKLK--NLHKVS  242 (285)
T ss_pred             ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHhc------CCCCCc--ccccCC
Confidence            3356899999999998888999999999999999999999998754321  111111111      011111  111133


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ..+.+++.+||+.+|.+||++.+++++-
T Consensus       243 ~~l~~li~~~l~~~p~~Rpt~~~il~~~  270 (285)
T cd06648         243 PRLRSFLDRMLVRDPAQRATAAELLNHP  270 (285)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHccCc
Confidence            5688999999999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=8.1e-33  Score=287.39  Aligned_cols=245  Identities=27%  Similarity=0.371  Sum_probs=187.5

Q ss_pred             ccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc--CeeEEEEe
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYD  423 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~lV~E  423 (670)
                      |+..+.||+|+||.||+|....                  ..+.+.+|++++++++|||++++++++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            5677899999999999997643                  124578899999999999999999999887  88999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++ +|.+++.... ..+++.+++.++.||+.||+|||+   .+++|+||||+||++++++.+||+|||++........
T Consensus        81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~  155 (287)
T cd07840          81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS  155 (287)
T ss_pred             cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence            9974 8988886543 468999999999999999999998   8999999999999999999999999999987655432


Q ss_pred             ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc---C---Cccc----
Q 035655          504 SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL---G---QVLD----  571 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~---~---~~~~----  571 (670)
                      .......++..|+|||.+.+ ..++.++||||||++++||++|+.||...... ...........   .   ....    
T Consensus       156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07840         156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF  235 (287)
T ss_pred             ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhh
Confidence            22334467889999997764 46789999999999999999999999764321 11111110000   0   0000    


Q ss_pred             -ccCC------CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          572 -VVDP------NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       572 -~~d~------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                       ...+      .+...+...+...+.+++..||+.+|.+||++++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence             0000      00000111125678899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-33  Score=285.90  Aligned_cols=232  Identities=27%  Similarity=0.351  Sum_probs=189.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccch-------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .+.|..-++||+||||.||-++.+.+                   .....+|-.+|.+++.+.||.+--.++.++.+|+|
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            35588889999999999999876542                   22344789999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +..|.||+|.-+|.......+++..++-++.+|+.||.+||.   .+||.||+||+|||||+.|+++|+|.|||..+..+
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence            999999999999998887889999999999999999999999   89999999999999999999999999999987765


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ..  ....+||.+|||||++.++.|+...|-||+||+||||+.|+.||.... ..+.|   .....++.+  |   ..++
T Consensus       341 ~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K-eKvk~---eEvdrr~~~--~---~~ey  409 (591)
T KOG0986|consen  341 KP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK-EKVKR---EEVDRRTLE--D---PEEY  409 (591)
T ss_pred             Cc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh-hhhhH---HHHHHHHhc--c---hhhc
Confidence            42  233489999999999999999999999999999999999999997421 11111   000111100  1   1234


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPT  606 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs  606 (670)
                      +....+....+....|++||.+|--
T Consensus       410 ~~kFS~eakslc~~LL~Kdp~~RLG  434 (591)
T KOG0986|consen  410 SDKFSEEAKSLCEGLLTKDPEKRLG  434 (591)
T ss_pred             ccccCHHHHHHHHHHHccCHHHhcc
Confidence            4444566677777888999998854

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.5e-32  Score=287.50  Aligned_cols=246  Identities=26%  Similarity=0.339  Sum_probs=186.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|+..+.||+|++|.||+|....                  ..+.+.+|++++++++||||+++++++......++|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            468889999999999999997642                  12457889999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-CCcEEEEeecCceeccCCC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-~~~~kL~DFGla~~~~~~~  502 (670)
                      |++ ++|.+++.......+++..+..++.||+.||+|||+   ++++||||||+||+++. ++.+||+|||++.......
T Consensus        82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~  157 (294)
T PLN00009         82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV  157 (294)
T ss_pred             ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence            996 588888866555557888999999999999999998   89999999999999985 5579999999997654322


Q ss_pred             cceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc----------
Q 035655          503 ISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD----------  571 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~----------  571 (670)
                       .......+++.|+|||++.+. .++.++|||||||+++||++|+.||...... ..........+....          
T Consensus       158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  235 (294)
T PLN00009        158 -RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFRILGTPNEETWPGVTSLP  235 (294)
T ss_pred             -cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhccccccch
Confidence             112334678899999988664 5789999999999999999999999753221 111000000000000          


Q ss_pred             ---ccCCCCCC----cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          572 ---VVDPNLGS----SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       572 ---~~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                         ..-+....    .........+.+++.+|++.+|.+||++.+++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               00000000    0111223557889999999999999999999974

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=5.8e-33  Score=283.53  Aligned_cols=233  Identities=24%  Similarity=0.391  Sum_probs=191.6

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..++||+|+||.||++....                  ...++.+|++++++++|+||+++.+++.+....++|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            47788999999999999986532                  234677899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          425 IPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       425 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      +++++|.+++.+.  ....+++..+..++.|++.||+|||+   .+++|+||+|+||++++++.+||+|||++...... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-  156 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-  156 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence            9999999998652  23468999999999999999999998   89999999999999999999999999999876554 


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                        ......++..|++||.+.+..++.++|+||||++++||++|+.||.........  .. ...+.         .....
T Consensus       157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~--~~-~~~~~---------~~~~~  222 (256)
T cd08530         157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR--YK-VQRGK---------YPPIP  222 (256)
T ss_pred             --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HH-HhcCC---------CCCCc
Confidence              222346888999999999888999999999999999999999999764321111  11 11111         11112


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ......+.+++..|++.+|.+||++.+++++
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         223 PIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             hhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            2344668899999999999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=2e-32  Score=281.29  Aligned_cols=228  Identities=26%  Similarity=0.355  Sum_probs=185.2

Q ss_pred             EeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          370 IGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ||+|++|.||+++...                   ..+.+.+|++++++++||||+++++.+.++...++|+||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6899999999998753                   224688999999999999999999999999999999999999999


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccc
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV  510 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~  510 (670)
                      .+++.+.  ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.......  ......
T Consensus        81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~  153 (262)
T cd05572          81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFC  153 (262)
T ss_pred             HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccccc
Confidence            9999664  358999999999999999999998   999999999999999999999999999998765432  223346


Q ss_pred             cCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHH
Q 035655          511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL  590 (670)
Q Consensus       511 gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~  590 (670)
                      ++..|++||.+.+..++.++|+||||+++|||++|+.||................ +        .....++......+.
T Consensus       154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~  224 (262)
T cd05572         154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK-G--------NGKLEFPNYIDKAAK  224 (262)
T ss_pred             CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc-c--------CCCCCCCcccCHHHH
Confidence            8899999999988889999999999999999999999997643211111111110 0        001112222246788


Q ss_pred             HHHHhhccCCCCCCCC-----HHHHHHH
Q 035655          591 QLGLLCSHQKAEARPT-----MRQVLRY  613 (670)
Q Consensus       591 ~l~~~Cl~~dP~~RPs-----~~evl~~  613 (670)
                      +++..||+.+|.+||+     ++|++++
T Consensus       225 ~~i~~~l~~~p~~R~~~~~~~~~~l~~~  252 (262)
T cd05572         225 DLIKQLLRRNPEERLGNLKGGIKDIKKH  252 (262)
T ss_pred             HHHHHHccCChhhCcCCcccCHHHHhcC
Confidence            9999999999999999     7887764

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-34  Score=329.16  Aligned_cols=241  Identities=28%  Similarity=0.415  Sum_probs=193.8

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .+-+++...+||.|.||.||-|...+                  ..+...+|.+++..|+|||+|+++|+-.+.+..+|.
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            34567778899999999999998754                  234567999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      ||||++|+|.+.+....  .+++.....+..|++.|++|||+   .+||||||||.||+|+.+|-+|++|||.|......
T Consensus      1313 MEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            99999999999985442  36666777788999999999999   99999999999999999999999999999877654


Q ss_pred             Cc---ceeeccccCcCCCCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          502 KI---SHTTNVVGTIGYIAPELARTGK---ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       502 ~~---~~~~~~~gt~~y~aPE~~~~~~---~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      ..   .......||+.|||||++.+..   ...+.||||+|||++||+||++||..-+   .+|...+...        .
T Consensus      1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d---ne~aIMy~V~--------~ 1456 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD---NEWAIMYHVA--------A 1456 (1509)
T ss_pred             hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc---chhHHHhHHh--------c
Confidence            31   2223568999999999997643   4568999999999999999999997522   1343332211        1


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .-....+.....+-.+++..|++.||++|.++.|++++=-+
T Consensus      1457 gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1457 GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred             cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence            11123344455566788899999999999999999987543

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.6e-32  Score=284.85  Aligned_cols=229  Identities=27%  Similarity=0.344  Sum_probs=182.1

Q ss_pred             EeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          370 IGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ||+|+||+||++....                   ..+.+..|++++++++||||+++++.+...+..++|+||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6899999999986532                   123456899999999999999999999999999999999999999


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccc
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV  510 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~  510 (670)
                      .+++.+.....+++.++..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||++.......  ......
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~  155 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIKGRA  155 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--cccccc
Confidence            999977655579999999999999999999998   899999999999999999999999999987654322  223346


Q ss_pred             cCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCcccHHHHHHH
Q 035655          511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELV  589 (670)
Q Consensus       511 gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l  589 (670)
                      ++..|+|||.+.+..++.++||||||++++||++|+.||...... .......     .... ...    ..+......+
T Consensus       156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~-~~~----~~~~~~~~~~  225 (277)
T cd05577         156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR-----RTLE-MAV----EYPDKFSPEA  225 (277)
T ss_pred             CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh-----cccc-ccc----cCCccCCHHH
Confidence            788999999998888999999999999999999999999753321 1111000     0000 011    1112224567


Q ss_pred             HHHHHhhccCCCCCCC-----CHHHHHHH
Q 035655          590 LQLGLLCSHQKAEARP-----TMRQVLRY  613 (670)
Q Consensus       590 ~~l~~~Cl~~dP~~RP-----s~~evl~~  613 (670)
                      .+++..||+.+|.+||     +..+++++
T Consensus       226 ~~li~~~l~~~p~~R~~~~~~~~~~ll~h  254 (277)
T cd05577         226 KDLCEALLQKDPEKRLGCRGGSADEVREH  254 (277)
T ss_pred             HHHHHHHccCChhHccCCCcccHHHHHhC
Confidence            8899999999999999     66666653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.2e-32  Score=285.15  Aligned_cols=242  Identities=27%  Similarity=0.384  Sum_probs=195.9

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ..+++|+..+.||+|++|.||++....               ..+.+.+|++.+++++|+|++++++.+......++|+|
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            456778889999999999999998752               14578899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++++|.+++.... ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++....... 
T Consensus        96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-  170 (286)
T cd06614          96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-  170 (286)
T ss_pred             ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence            999999999997654 369999999999999999999998   999999999999999999999999999986554322 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      .......++..|++||.+.+..++.++||||||++++||++|+.||.........  .... ....     +...  ...
T Consensus       171 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~--~~~~-~~~~-----~~~~--~~~  240 (286)
T cd06614         171 SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL--FLIT-TKGI-----PPLK--NPE  240 (286)
T ss_pred             hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHH-hcCC-----CCCc--chh
Confidence            1223345788999999998888999999999999999999999999754322111  1111 1111     0110  111


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .....+.+++.+|++.+|.+||++.+++++..
T Consensus       241 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~  272 (286)
T cd06614         241 KWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF  272 (286)
T ss_pred             hCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence            12356788999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1.5e-32  Score=287.40  Aligned_cols=246  Identities=24%  Similarity=0.283  Sum_probs=184.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCe-----
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRD-----  417 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~-----  417 (670)
                      ++|+..+.||+|+||.||+|....                  ..+.+.+|+.++++++ ||||+++++++.....     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            468889999999999999998643                  1246778999999995 6999999999877655     


Q ss_pred             eEEEEeccCCCCchhhcccCC---ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-CCcEEEEeec
Q 035655          418 LLLVYDYIPNGSLDSLLFDNE---NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFG  493 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-~~~~kL~DFG  493 (670)
                      .++||||+++ +|.+++....   ...+++..++.++.||+.||.|||+   .+++||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence            8999999985 8988886532   2468999999999999999999998   89999999999999998 8899999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccc
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~  572 (670)
                      +++....... ......+++.|+|||++.+ ..++.++||||||++++||++|..||....... .........+.....
T Consensus       157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~  234 (295)
T cd07837         157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPTEQ  234 (295)
T ss_pred             cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCChh
Confidence            9986543221 1223356889999998765 457899999999999999999999997533211 110000000000000


Q ss_pred             cC------------CCCC----CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          573 VD------------PNLG----SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       573 ~d------------~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..            +...    ....+.....+.+++..||++||.+||+++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            00            0000    00011234667889999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-34  Score=284.90  Aligned_cols=234  Identities=25%  Similarity=0.397  Sum_probs=197.7

Q ss_pred             ccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCC
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS  429 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gs  429 (670)
                      |.+.++||+|.||.|||++++.              +.++...|+.++++++.|++|+++|.+.....+++|||||-.|+
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGS  114 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGS  114 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCc
Confidence            6778999999999999998754              57889999999999999999999999999999999999999999


Q ss_pred             chhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeecc
Q 035655          430 LDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV  509 (670)
Q Consensus       430 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~  509 (670)
                      ..+.++-+. ++|++.++..+++..++||+|||.   ..-+|||||+.||||+-+|.+||+|||.|..+... .....++
T Consensus       115 iSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MAKRNTV  189 (502)
T KOG0574|consen  115 ISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MAKRNTV  189 (502)
T ss_pred             HHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhh-HHhhCcc
Confidence            999997654 589999999999999999999998   77899999999999999999999999999766442 2445668


Q ss_pred             ccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc--ccHHHHH
Q 035655          510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS--YVVAEME  587 (670)
Q Consensus       510 ~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~  587 (670)
                      .||+-|||||++..-.|..++||||+|+...||..|+.||.+-+.-            +-.-++...-...  -+..-..
T Consensus       190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM------------RAIFMIPT~PPPTF~KPE~WS~  257 (502)
T KOG0574|consen  190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM------------RAIFMIPTKPPPTFKKPEEWSS  257 (502)
T ss_pred             ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc------------ceeEeccCCCCCCCCChHhhhh
Confidence            9999999999999999999999999999999999999999752211            1111111111111  2333456


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .+-+++..|+-+.|++|-|+-++++|-
T Consensus       258 ~F~DFi~~CLiK~PE~R~TA~~L~~H~  284 (502)
T KOG0574|consen  258 EFNDFIRSCLIKKPEERKTALRLCEHT  284 (502)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence            788999999999999999999999863

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.3e-32  Score=286.00  Aligned_cols=246  Identities=25%  Similarity=0.334  Sum_probs=187.0

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      +|+..++||+|++|.||+|+...                 ....+.+|++++++++||||+++++++...+..++|+||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            57889999999999999998743                 1346678999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCC-ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          426 PNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       426 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      ++ +|.+++.... ...+++.++.+++.|++.||.|||+   .+++||||||+||++++++.+||+|||++....... .
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-~  155 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-N  155 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-c
Confidence            85 8888886543 3468999999999999999999998   899999999999999999999999999997554322 1


Q ss_pred             eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHH------------hhcCCcc
Q 035655          505 HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEF------------QHLGQVL  570 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~------------~~~~~~~  570 (670)
                      ......++..|++||++.+. .++.++|||||||+++||++|+.||...... ........            .......
T Consensus       156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd07836         156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK  235 (284)
T ss_pred             ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence            12234578899999987654 5688999999999999999999999763321 11110000            0000000


Q ss_pred             cccCCCC---CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 DVVDPNL---GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ~~~d~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .......   .....+.....+.+++..|++.||.+||+++|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            0000000   001111224567889999999999999999999864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.9e-32  Score=290.43  Aligned_cols=239  Identities=26%  Similarity=0.397  Sum_probs=188.4

Q ss_pred             CccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .|+..+.||+|+||.||++....                   ....+.+|++++++++|||+++++++|.+++..++|+|
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            36677899999999999987532                   12467889999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |++ |+|.+++... ...++|.++..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||++.....   
T Consensus       106 ~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---  177 (317)
T cd06635         106 YCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---  177 (317)
T ss_pred             CCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence            996 5787777543 3468999999999999999999998   8999999999999999999999999999875433   


Q ss_pred             ceeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          504 SHTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                        .....|+..|+|||++.   .+.++.++|||||||+++||++|+.||........  .........      +...  
T Consensus       178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~~~~~------~~~~--  245 (317)
T cd06635         178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIAQNES------PTLQ--  245 (317)
T ss_pred             --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHhccC------CCCC--
Confidence              22346888999999873   45688999999999999999999999865321111  001111100      1111  


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCCCCC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPI  622 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~  622 (670)
                       .......+.+++.+||+.+|.+||++.++++++......+.
T Consensus       246 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  286 (317)
T cd06635         246 -SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE  286 (317)
T ss_pred             -CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence             11223457889999999999999999999998876554443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.1e-32  Score=280.99  Aligned_cols=235  Identities=24%  Similarity=0.444  Sum_probs=193.3

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|+||.||++....                  ..+.+.+|++++++++|||++++.+.+..+...++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            47788999999999999998652                  235678999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCC--ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          425 IPNGSLDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       425 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      +++++|.+++....  ...+++.++..++.+++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            99999999997643  3579999999999999999999998   899999999999999999999999999998765543


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       .......|++.|+|||......++.++||||+|+++++|++|+.||......  ....... ...     .+.+    +
T Consensus       158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~-~~~-----~~~~----~  224 (258)
T cd08215         158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL--ELALKIL-KGQ-----YPPI----P  224 (258)
T ss_pred             -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH--HHHHHHh-cCC-----CCCC----C
Confidence             2233457889999999998888999999999999999999999999764321  1111111 111     1111    1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ......+.+++.+||+.+|.+||++.+++++
T Consensus       225 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         225 SQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            1223567889999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2.9e-32  Score=281.80  Aligned_cols=239  Identities=24%  Similarity=0.300  Sum_probs=183.2

Q ss_pred             hHHHhhcCccccceE--eeeCceeEEEeeccchH----------HHH-HHHHHHHhcc-ccCceeeeeeeeeccCeeEEE
Q 035655          356 DLYTATKGFKQSEVI--GTGGFGEVYKGVLPTRM----------REF-AAEIESLGRL-RHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       356 ~l~~~t~~f~~~~~l--G~G~fg~Vykg~~~~~~----------~~f-~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      +.....++|+..+.+  |+|+||.||++......          ..+ ..|+.....+ +||||+++++++...+..++|
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv   87 (267)
T PHA03390          8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLI   87 (267)
T ss_pred             HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence            334445666666666  99999999999864421          111 1233333323 699999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceeccC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFDH  500 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~  500 (670)
                      |||+++++|.+++..+.  .+++.++..++.|+++||.|||+   .+++||||||+||+++.++ .++|+|||+++....
T Consensus        88 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~  162 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT  162 (267)
T ss_pred             EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC
Confidence            99999999999996553  79999999999999999999998   8999999999999999998 999999999876543


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .     ....++..|+|||++.+..++.++||||||++++||++|+.||...................       ..  .
T Consensus       163 ~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~--~  228 (267)
T PHA03390        163 P-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK-------KL--P  228 (267)
T ss_pred             C-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc-------cC--C
Confidence            2     22368899999999998899999999999999999999999997532221111110010010       00  1


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPT-MRQVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~  613 (670)
                      ........+.+++..||+.+|.+||+ ++|++++
T Consensus       229 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        229 FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             cccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence            11133456788999999999999995 6999864

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=2.7e-32  Score=286.40  Aligned_cols=249  Identities=27%  Similarity=0.359  Sum_probs=187.4

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC----
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR----  416 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~----  416 (670)
                      ...++|+..+.||+|+||.||+|....                  ....+.+|++++++++||||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            345788999999999999999998743                  1235678999999999999999999987654    


Q ss_pred             ------eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEE
Q 035655          417 ------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLG  490 (670)
Q Consensus       417 ------~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~  490 (670)
                            ..++|+||+++ +|..++... ...+++.++..++.|++.||+|||+   .+|+||||||+||++++++.+||+
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~  158 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLA  158 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeC
Confidence                  78999999976 777777554 3468999999999999999999999   899999999999999999999999


Q ss_pred             eecCceeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcC-
Q 035655          491 DFGLARLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLG-  567 (670)
Q Consensus       491 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~-  567 (670)
                      |||++...............++..|+|||.+.+ ..++.++|||||||+++||++|+.||...... ....+....... 
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~  238 (302)
T cd07864         159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC  238 (302)
T ss_pred             cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            999998765443222233456788999998764 45788999999999999999999999753321 111111110000 


Q ss_pred             --Ccccc--------cCC------CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          568 --QVLDV--------VDP------NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       568 --~~~~~--------~d~------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                        .....        .++      .....+ ......+.+++..||+.+|.+||++++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             hhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence              00000        000      000000 1124567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-32  Score=276.04  Aligned_cols=233  Identities=28%  Similarity=0.458  Sum_probs=191.4

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|+..+.||+|++|.||++....                  ....+.+|++++++++|||++++++++...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            47778999999999999987542                  235688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.........
T Consensus        81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  155 (254)
T cd06627          81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD  155 (254)
T ss_pred             CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence            9999999998655  468999999999999999999998   89999999999999999999999999999876554321


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                       .....++..|+|||...+..++.++|||++|+++++|++|+.||.........+.  .. ...     .+.+    +..
T Consensus       156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~--~~-~~~-----~~~~----~~~  222 (254)
T cd06627         156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR--IV-QDD-----HPPL----PEG  222 (254)
T ss_pred             -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH--Hh-ccC-----CCCC----CCC
Confidence             2334688999999998888889999999999999999999999975432221111  11 011     1111    112


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+++.+||+.+|++||++.+++.+
T Consensus       223 ~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         223 ISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             CCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence            23567889999999999999999999863

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-32  Score=282.56  Aligned_cols=244  Identities=25%  Similarity=0.306  Sum_probs=188.3

Q ss_pred             ccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      |+..+.||+|++|.||++....                  ....+..|++++++++|+||+++++++..+...++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            4567899999999999997642                  1346778999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++ +|.+++.... ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||.+....... ..
T Consensus        81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~  154 (283)
T cd05118          81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RP  154 (283)
T ss_pred             CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-cc
Confidence            75 8888886643 478999999999999999999998   899999999999999999999999999998765543 12


Q ss_pred             eeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc------CCccc------
Q 035655          506 TTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL------GQVLD------  571 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~------~~~~~------  571 (670)
                      .....++..|+|||.+.+. .++.++||||||+++++|++|+.||...+.. ...........      ....+      
T Consensus       155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd05118         155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK  234 (283)
T ss_pred             ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence            2334678899999998776 7899999999999999999999999753321 11111000000      00000      


Q ss_pred             ccCCCC----CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          572 VVDPNL----GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       572 ~~d~~l----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..-+..    ...........+.+++..||++||.+||++++++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            000000    011122345678899999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-32  Score=281.22  Aligned_cols=235  Identities=23%  Similarity=0.382  Sum_probs=186.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeecc--Cee
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDL  418 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~  418 (670)
                      .+|+..+.||+|+||.||++....                     ..+.+.+|++++++++|+||+++++++.+.  +.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            478889999999999999997532                     124677899999999999999999998654  468


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++++||+++++|.+++....  .+++....+++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||+++..
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence            89999999999999986543  48899999999999999999998   89999999999999999999999999999865


Q ss_pred             cCCCc--ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          499 DHGKI--SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       499 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      .....  .......++..|+|||++.+..++.++|||||||+++||++|+.||......  .-.....         ...
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~---------~~~  225 (264)
T cd06653         157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM--AAIFKIA---------TQP  225 (264)
T ss_pred             ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH--HHHHHHH---------cCC
Confidence            33111  1122346889999999998888999999999999999999999999753211  1111111         011


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .....+....+.+.+++..||+ +|..||+..+++.|
T Consensus       226 ~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         226 TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence            1112233344667888889998 57999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=2.7e-32  Score=283.91  Aligned_cols=229  Identities=24%  Similarity=0.282  Sum_probs=176.8

Q ss_pred             eEeeeCceeEEEeeccch-------------------HHHHHHHHHHHh---ccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          369 VIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLG---RLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       369 ~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~---~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .||+|+||.||++.....                   ...+.+|..+++   ..+||||+.+.+++...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999876431                   122344544443   3479999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +|+|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+|||+++++.+||+|||++.......   .
T Consensus        81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~  152 (279)
T cd05633          81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---P  152 (279)
T ss_pred             CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---c
Confidence            99999998654  359999999999999999999998   899999999999999999999999999987554322   2


Q ss_pred             eccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....|+..|+|||.+.+ ..++.++|||||||+++||++|+.||................      .....    .+...
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~------~~~~~----~~~~~  222 (279)
T cd05633         153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL------TVNVE----LPDSF  222 (279)
T ss_pred             cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh------cCCcC----Ccccc
Confidence            23468999999998864 557899999999999999999999997532211111111110      11111    22223


Q ss_pred             HHHHHHHHHhhccCCCCCCC-----CHHHHHHHhc
Q 035655          586 MELVLQLGLLCSHQKAEARP-----TMRQVLRYLN  615 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~  615 (670)
                      ...+.+++..||+.||.+||     +++|+++|..
T Consensus       223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~  257 (279)
T cd05633         223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVF  257 (279)
T ss_pred             CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcc
Confidence            45677889999999999999     6999988643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-33  Score=297.84  Aligned_cols=232  Identities=28%  Similarity=0.411  Sum_probs=189.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      +.|...+.||.|.||.||-+++..                   .-.++..||..|++++|||++.+.||+......+|||
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVM  105 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVM  105 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHH
Confidence            346667889999999999998643                   2356789999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||| -||-.|+|.-.. +++-+.++..|+.+.+.||+|||+   .+.||||||+.||||.+.|.|||+|||.|....+  
T Consensus       106 EYC-lGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--  178 (948)
T KOG0577|consen  106 EYC-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP--  178 (948)
T ss_pred             HHH-hccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCc--
Confidence            999 568888775543 579999999999999999999999   8999999999999999999999999999987654  


Q ss_pred             cceeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          503 ISHTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                         ...++|||.|||||++.   .+.|+-|.|||||||...||.-.++|+-.-+. +.  +......     .-.|.|..
T Consensus       179 ---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-MS--ALYHIAQ-----NesPtLqs  247 (948)
T KOG0577|consen  179 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MS--ALYHIAQ-----NESPTLQS  247 (948)
T ss_pred             ---hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-HH--HHHHHHh-----cCCCCCCC
Confidence               45679999999999874   67899999999999999999999999754211 11  1111111     11233332


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                         .+-...+.+++..|+++-|.+|||.+++++|-
T Consensus       248 ---~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~  279 (948)
T KOG0577|consen  248 ---NEWSDYFRNFVDSCLQKIPQERPTSEELLKHR  279 (948)
T ss_pred             ---chhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence               22345678888899999999999999999864

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=5.4e-32  Score=291.43  Aligned_cols=245  Identities=22%  Similarity=0.276  Sum_probs=187.4

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----  415 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----  415 (670)
                      ...++|+..+.||+|+||.||++....                  ....+.+|+.++++++||||+++++++...     
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   92 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE   92 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence            345789999999999999999997532                  124567899999999999999999988643     


Q ss_pred             -CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          416 -RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       416 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                       ...++|+||+. ++|.+++..    .+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+
T Consensus        93 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~  164 (353)
T cd07850          93 FQDVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  164 (353)
T ss_pred             cCcEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence             35799999995 588887743    28899999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC------
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ------  568 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~------  568 (670)
                      ++......  ......++..|+|||.+.+..++.++|||||||++++|++|+.||...+.. ..+.......+.      
T Consensus       165 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~  241 (353)
T cd07850         165 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQLGTPSDEFM  241 (353)
T ss_pred             ceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence            98654432  123346789999999999999999999999999999999999999753311 111100000000      


Q ss_pred             ---------------------cccccC----CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          569 ---------------------VLDVVD----PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       569 ---------------------~~~~~d----~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                                           ......    +.............+.+++.+||+.||++||++.|++++-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~  312 (353)
T cd07850         242 SRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP  312 (353)
T ss_pred             HHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence                                 000000    0000111122355678999999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=5.3e-32  Score=280.91  Aligned_cols=242  Identities=23%  Similarity=0.230  Sum_probs=182.7

Q ss_pred             ccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccc-cCceeeeeeeeecc--CeeEEEEe
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRK--RDLLLVYD  423 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~--~~~~lV~E  423 (670)
                      |+..++||+|+||.||++....                 ......+|+.++.++. |+||+++++++.+.  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            5667899999999999997632                 1123447899999985 99999999999887  88999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |++ ++|.+++.... ..++|.++..++.|++.||.|||+   .+++||||||+||+++. +.+||+|||+++.......
T Consensus        81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~  154 (282)
T cd07831          81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP  154 (282)
T ss_pred             cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence            997 58888876543 368999999999999999999998   89999999999999999 9999999999986643321


Q ss_pred             ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHh-----------hcCCcc
Q 035655          504 SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQ-----------HLGQVL  570 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~-----------~~~~~~  570 (670)
                        .....++..|+|||++.. +.++.++|||||||+++||++|+.||...+. ....+.....           ......
T Consensus       155 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (282)
T cd07831         155 --YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHM  232 (282)
T ss_pred             --cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccc
Confidence              123467889999997654 5578899999999999999999999976332 1111111100           000000


Q ss_pred             cccCCCCCC----cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 DVVDPNLGS----SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ~~~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+....    .........+.+++..||+++|.+||++++++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         233 NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            111111000    0112335788999999999999999999999975

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.98  E-value=8e-33  Score=300.01  Aligned_cols=245  Identities=25%  Similarity=0.321  Sum_probs=192.5

Q ss_pred             CccccceEeeeCceeEEEeeccch---------------HHHHHHHHHHHhccc-c-----CceeeeeeeeeccCeeEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTR---------------MREFAAEIESLGRLR-H-----KHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~---------------~~~f~~Ei~~L~~l~-H-----~nIv~l~g~~~~~~~~~lV  421 (670)
                      +|.+.+.||+|.||.|-||.+.+.               .++-..|+.+|.+|+ |     -|+|+++++|...+.+|||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV  266 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV  266 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence            788999999999999999987652               234457999999997 4     4899999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC--cEEEEeecCceecc
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM--NARLGDFGLARLFD  499 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~--~~kL~DFGla~~~~  499 (670)
                      +|.+ .-+|.++|+.+.-..++...++.++.||+.||.+||+   .+|||+||||+||||.+-.  .+||+|||.+....
T Consensus       267 fELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~  342 (586)
T KOG0667|consen  267 FELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES  342 (586)
T ss_pred             ehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence            9999 5699999998887789999999999999999999998   9999999999999997544  79999999998765


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHH-----------Hh---
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLE-----------FQ---  564 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~-----------~~---  564 (670)
                      ...    .....+..|.|||++.+.+|+.+.||||||||+.||++|...|.++.. .....+.+           ..   
T Consensus       343 q~v----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~  418 (586)
T KOG0667|consen  343 QRV----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKA  418 (586)
T ss_pred             Ccc----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcccc
Confidence            532    245678899999999999999999999999999999999888866321 11111111           00   


Q ss_pred             -----h-cC--------C-----------------cccccCC-C---CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHH
Q 035655          565 -----H-LG--------Q-----------------VLDVVDP-N---LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ  609 (670)
Q Consensus       565 -----~-~~--------~-----------------~~~~~d~-~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e  609 (670)
                           . .+        .                 ..+...| .   +........-+.+++++..|+..||.+|+|..|
T Consensus       419 ~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~q  498 (586)
T KOG0667|consen  419 HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQ  498 (586)
T ss_pred             ceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHH
Confidence                 0 00        0                 0000011 0   001111233467899999999999999999999


Q ss_pred             HHHHhc
Q 035655          610 VLRYLN  615 (670)
Q Consensus       610 vl~~L~  615 (670)
                      .++|-.
T Consensus       499 al~Hpf  504 (586)
T KOG0667|consen  499 ALNHPF  504 (586)
T ss_pred             HhcCcc
Confidence            999754

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.98  E-value=4.2e-32  Score=282.24  Aligned_cols=244  Identities=24%  Similarity=0.313  Sum_probs=185.4

Q ss_pred             ccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhcc---ccCceeeeeeeeeccCe-----
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRL---RHKHLVNLQGWCKRKRD-----  417 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l---~H~nIv~l~g~~~~~~~-----  417 (670)
                      |++.+.||+|+||.||++....                  ....+.+|+.+++++   +||||+++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            5678899999999999998743                  013466788777666   59999999999988776     


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .+++|||+. ++|.+++.......+++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++..
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~~  156 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARI  156 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCccee
Confidence            999999997 589998876554569999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch--hHHHHHHHhhcCCc------
Q 035655          498 FDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI--LVDWVLEFQHLGQV------  569 (670)
Q Consensus       498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--~~~~~~~~~~~~~~------  569 (670)
                      ......  .....++..|+|||++.+..++.++|||||||+++||++|+.||......  ..............      
T Consensus       157 ~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07838         157 YSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV  234 (287)
T ss_pred             ccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence            654321  12335788999999999889999999999999999999999998753321  11111000000000      


Q ss_pred             ---ccccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 ---LDVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ---~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                         .........   ..........+.+++.+||+.||.+||+++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence               000000000   11112334667889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.98  E-value=2.5e-32  Score=291.87  Aligned_cols=246  Identities=22%  Similarity=0.310  Sum_probs=184.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----Cee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----RDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~~  418 (670)
                      +++|+..++||+|+||.||+|+...                 ....+.+|+.++++++||||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            5789999999999999999997532                 224577899999999999999999987644     358


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||++ ++|.+++..   ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++...
T Consensus        84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  156 (336)
T cd07849          84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIA  156 (336)
T ss_pred             EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeec
Confidence            99999996 488877743   358999999999999999999999   89999999999999999999999999999865


Q ss_pred             cCCCcc--eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHHhhc---CCccc
Q 035655          499 DHGKIS--HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEFQHL---GQVLD  571 (670)
Q Consensus       499 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~~~~---~~~~~  571 (670)
                      ......  ......|+..|+|||.+.+ ..++.++|||||||+++||++|+.||...+... ..........   .....
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (336)
T cd07849         157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNC  236 (336)
T ss_pred             cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence            432211  1233478999999998654 468899999999999999999999997533211 1111110000   00000


Q ss_pred             ccC-----------CCCCCc---ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          572 VVD-----------PNLGSS---YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       572 ~~d-----------~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +.+           ......   ........+.+++.+||+.+|.+||++.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000           000000   011224568899999999999999999999997

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.98  E-value=1.5e-32  Score=282.05  Aligned_cols=234  Identities=21%  Similarity=0.365  Sum_probs=187.2

Q ss_pred             CccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      +|...++||+|+||.||++....                     ...++..|+.++++++||||+++++++.+....++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            47778999999999999886532                     122456789999999999999999999999999999


Q ss_pred             EeccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          422 YDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||+++++|.+++..  .....+++.+++.++.|++.||.|||+   .+++|+||||+||+++. +.+||+|||+++...
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecC
Confidence            999999999998864  233569999999999999999999998   89999999999999975 569999999997664


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ... .......|+..|+|||.+.+..++.++|+||||+++++|++|+.||.....  ........      ....+.   
T Consensus       157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~~~~~------~~~~~~---  224 (260)
T cd08222         157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVVLRIV------EGPTPS---  224 (260)
T ss_pred             CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHH------cCCCCC---
Confidence            332 122334678899999999888889999999999999999999999975322  11111111      111111   


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                       .+......+.+++.+||+.+|.+||++.|++++
T Consensus       225 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         225 -LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             -CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence             222334567889999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.98  E-value=3.6e-32  Score=287.16  Aligned_cols=247  Identities=23%  Similarity=0.304  Sum_probs=184.2

Q ss_pred             CccccceEeeeCceeEEEeeccc--h-------------------HHHHHHHHHHHhccccCceeeeeeeeecc--CeeE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT--R-------------------MREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLL  419 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~--~-------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~  419 (670)
                      +|+..++||+|+||.||+|....  .                   .+.+.+|+.++++++||||+++++++...  ...+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            47788999999999999998643  1                   14567899999999999999999999988  7899


Q ss_pred             EEEeccCCCCchhhcccC---CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC----CCcEEEEee
Q 035655          420 LVYDYIPNGSLDSLLFDN---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA----DMNARLGDF  492 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~----~~~~kL~DF  492 (670)
                      +||||+++ +|.+++...   ....+++..+..++.|++.||.|||+   .+++||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999975 676666432   22368999999999999999999998   89999999999999999    999999999


Q ss_pred             cCceeccCCCc--ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchh-----------HH
Q 035655          493 GLARLFDHGKI--SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-----------VD  558 (670)
Q Consensus       493 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-----------~~  558 (670)
                      |++........  .......++..|+|||.+.+. .++.++|||||||+++||++|+.||.......           ..
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER  236 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence            99986644322  122334678999999987664 57899999999999999999999997532211           00


Q ss_pred             HHHHH-----------hhcCCcccccCCCCCCccc---------H--HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          559 WVLEF-----------QHLGQVLDVVDPNLGSSYV---------V--AEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       559 ~~~~~-----------~~~~~~~~~~d~~l~~~~~---------~--~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .+..+           ..........+......++         .  .....+.+++.+|++.||++||++.|++++
T Consensus       237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            00000           0000000000000000000         0  223568899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.98  E-value=6.7e-32  Score=284.11  Aligned_cols=246  Identities=27%  Similarity=0.362  Sum_probs=183.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR------  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------  416 (670)
                      -++|+..++||+|+||.||++....                  ....+.+|++++++++||||++++++|....      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            3578999999999999999997643                  1224568999999999999999999987543      


Q ss_pred             --eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          417 --DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       417 --~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                        ..++|+||+. ++|.+++.... ..+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+
T Consensus        91 ~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865          91 KGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             CceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCC
Confidence              4599999996 48888875443 368999999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcc---eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCc
Q 035655          495 ARLFDHGKIS---HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQV  569 (670)
Q Consensus       495 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~  569 (670)
                      +.........   ......++..|+|||.+.+. .++.++||||||++++||++|+.||...... .........  +..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~--~~~  243 (310)
T cd07865         166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC--GSI  243 (310)
T ss_pred             cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh--CCC
Confidence            9866443211   12234678899999987654 4688999999999999999999999764321 111111100  000


Q ss_pred             ccccCCC-----------CCCcc---------cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 LDVVDPN-----------LGSSY---------VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ~~~~d~~-----------l~~~~---------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ...+.+.           +....         .......+.+++.+||+.||.+||+++|++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            0000000           00000         00012456789999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.98  E-value=6e-32  Score=282.07  Aligned_cols=237  Identities=25%  Similarity=0.316  Sum_probs=187.3

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCee
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~  418 (670)
                      +|+..+.||+|++|.||++....                       ..+.+.+|+++++++ +||||+++++.+..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            47778999999999999886421                       123567899999999 599999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++||||+++|+|.+++...  ..+++..+..++.|++++|.|||+   .+++||||||+||+++.++.++|+|||+++..
T Consensus        81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~  155 (288)
T cd05583          81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (288)
T ss_pred             EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence            9999999999999998654  358999999999999999999998   89999999999999999999999999998865


Q ss_pred             cCCCcceeeccccCcCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcch--hHHHHHHHhhcCCcccccC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDHFI--LVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--~~~~~~~~~~~~~~~~~~d  574 (670)
                      ............|+..|+|||.+.+..  .+.++||||||++++||++|+.||......  ..........       ..
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-------~~  228 (288)
T cd05583         156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-------SK  228 (288)
T ss_pred             ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-------cC
Confidence            544322233456889999999987665  788999999999999999999999642211  1111111110       01


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +.....    ....+.+++.+||+.+|++|||++++.+.|+
T Consensus       229 ~~~~~~----~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         229 PPFPKT----MSAEARDFIQKLLEKDPKKRLGANGADEIKN  265 (288)
T ss_pred             CCCCcc----cCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence            111111    2245678899999999999999988877765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.98  E-value=5.3e-32  Score=288.39  Aligned_cols=244  Identities=22%  Similarity=0.264  Sum_probs=182.9

Q ss_pred             ceEeee--CceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTG--GFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G--~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ..||+|  +||+||++....                  ..+.+.+|+.+++.++||||++++++|..++..++|+||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            456666  899999997632                  135678899999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce--
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH--  505 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~--  505 (670)
                      ++|.+++.......+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+|++||+.+..........  
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV  160 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence            999999977655568999999999999999999998   899999999999999999999999998654332211110  


Q ss_pred             ----eeccccCcCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhc-------------
Q 035655          506 ----TTNVVGTIGYIAPELARTG--KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHL-------------  566 (670)
Q Consensus       506 ----~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~-------------  566 (670)
                          .....++..|+|||++.+.  .++.++|||||||+++||++|+.||......... .......             
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  239 (328)
T cd08226         161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML-LQKLKGPPYSPLDITTFPCE  239 (328)
T ss_pred             cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH-HHHhcCCCCCCccccccchh
Confidence                0112356679999998764  4789999999999999999999999753211100 0000000             


Q ss_pred             ----------------------CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          567 ----------------------GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       567 ----------------------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                                            .......+..+...........+.+++.+||+.||.+|||+.|++++-.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~  310 (328)
T cd08226         240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF  310 (328)
T ss_pred             hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence                                  0000011111222223345567899999999999999999999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.98  E-value=2.4e-32  Score=291.77  Aligned_cols=250  Identities=23%  Similarity=0.349  Sum_probs=189.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec----cCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR----KRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~----~~~~  418 (670)
                      .++|+..+.||+|+||.||++....                  ..+.+.+|+.+|++++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            4688999999999999999997542                  23456789999999999999999998763    3468


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||+. ++|.+++...  ..+++..+..++.||+.||.|||+   .+++||||||+||++++++.+||+|||++...
T Consensus        84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence            99999995 6899998654  348999999999999999999998   89999999999999999999999999999765


Q ss_pred             cCCCcc---eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-HHHHHHh---------
Q 035655          499 DHGKIS---HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-DWVLEFQ---------  564 (670)
Q Consensus       499 ~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~~~~~~~---------  564 (670)
                      ......   ......|+..|+|||.+.+ ..++.++|||||||+++||++|+.||........ .......         
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~  237 (334)
T cd07855         158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN  237 (334)
T ss_pred             cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence            443221   1233478899999998765 4688999999999999999999999976432111 0000000         


Q ss_pred             --hcCCc---ccccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          565 --HLGQV---LDVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       565 --~~~~~---~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                        .....   .........   ..........+.+++..||+.+|.+||++++++++.+-
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~  297 (334)
T cd07855         238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL  297 (334)
T ss_pred             hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhh
Confidence              00000   000000000   01112235678899999999999999999999997654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.98  E-value=3.7e-32  Score=282.45  Aligned_cols=244  Identities=25%  Similarity=0.324  Sum_probs=186.7

Q ss_pred             ccccceEeeeCceeEEEeeccch-----------------HHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEecc
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~~-----------------~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      |+..+.||+|++|.||+|.....                 .....+|+..+++++ ||||+++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            56678999999999999987431                 123457999999999 999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                       +|+|.+++.......+++.++..++.|++.+|.|||+   .+++|+||||+||++++++.++|+|||++.......  .
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--~  154 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--P  154 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCC--C
Confidence             8899999877654578999999999999999999998   899999999999999999999999999998654422  1


Q ss_pred             eeccccCcCCCCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHH--------------HHHHHhhcCCcc
Q 035655          506 TTNVVGTIGYIAPELAR-TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVD--------------WVLEFQHLGQVL  570 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~--------------~~~~~~~~~~~~  570 (670)
                      .....++..|+|||++. ...++.++|+||||++++||++|+.||.........              |...........
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd07830         155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG  234 (283)
T ss_pred             cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence            22346788999999875 445789999999999999999999999653221110              110000000000


Q ss_pred             cccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 DVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..+.....   ..........+.+++.+||+.+|.+||+++|++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            00000000   01111123668899999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.98  E-value=5.2e-32  Score=290.27  Aligned_cols=247  Identities=21%  Similarity=0.335  Sum_probs=183.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc------C
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK------R  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~  416 (670)
                      .++|...+.||+|+||.||+|+...                  ....+.+|+.++++++||||+++++++...      .
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            3789999999999999999997532                  123577899999999999999999998654      3


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..++|+||+.. +|.+++    ...+++..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++
T Consensus        94 ~~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~  165 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLAR  165 (342)
T ss_pred             eEEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence            46999999964 777665    2358999999999999999999998   899999999999999999999999999987


Q ss_pred             eccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHHh----------
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEFQ----------  564 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~~----------  564 (670)
                      .....    .....++..|+|||.+.+ ..++.++|||||||+++||++|+.||....... ........          
T Consensus       166 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (342)
T cd07879         166 HADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK  241 (342)
T ss_pred             CCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            54332    223467889999998876 468899999999999999999999998643211 11000000          


Q ss_pred             -hc---CCcccccCCCCCCcc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH--hcCCCC
Q 035655          565 -HL---GQVLDVVDPNLGSSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY--LNGDEL  619 (670)
Q Consensus       565 -~~---~~~~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~~~~  619 (670)
                       ..   ...............   .......+.+++..||+.||.+||++++++++  ++....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence             00   000000000000000   01123457799999999999999999999976  554433

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.98  E-value=2.8e-32  Score=280.07  Aligned_cols=238  Identities=24%  Similarity=0.299  Sum_probs=194.8

Q ss_pred             cCccccceEeeeCceeEEEeeccch-------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      +.|+..+.||+|.-|+||++.+.+.                   ......|-+||+.+.||-++.|++.++.++..|+||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            4567789999999999999987652                   233457889999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC--
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH--  500 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~--  500 (670)
                      |||+||+|...++++....+++..++-++..|+.||+|||-   .|||.|||||+||||.++|.+-|+||.|+.....  
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP  233 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence            99999999999999888899999999999999999999999   9999999999999999999999999999753311  


Q ss_pred             -------------------------------C-Cc---------------------ceeeccccCcCCCCccccccCCCC
Q 035655          501 -------------------------------G-KI---------------------SHTTNVVGTIGYIAPELARTGKAS  527 (670)
Q Consensus       501 -------------------------------~-~~---------------------~~~~~~~gt~~y~aPE~~~~~~~t  527 (670)
                                                     . ..                     ......+||..|+|||++++...+
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg  313 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG  313 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence                                           0 00                     011225899999999999999999


Q ss_pred             ccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCC-
Q 035655          528 CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT-  606 (670)
Q Consensus       528 ~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-  606 (670)
                      .+.|-|+|||++|||+.|+.||.+....           ..+..++...+.-......+..+.+|+...|.+||.+|-- 
T Consensus       314 sAVDWWtfGIflYEmLyG~TPFKG~~~~-----------~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~  382 (459)
T KOG0610|consen  314 SAVDWWTFGIFLYEMLYGTTPFKGSNNK-----------ETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGS  382 (459)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcCCCCch-----------hhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhcc
Confidence            9999999999999999999999864321           1122222222221112244567889999999999999988 


Q ss_pred             ---HHHHHHH
Q 035655          607 ---MRQVLRY  613 (670)
Q Consensus       607 ---~~evl~~  613 (670)
                         +.||-+|
T Consensus       383 ~rGA~eIK~H  392 (459)
T KOG0610|consen  383 KRGAAEIKRH  392 (459)
T ss_pred             ccchHHhhcC
Confidence               7777764

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.98  E-value=4.6e-32  Score=289.89  Aligned_cols=247  Identities=24%  Similarity=0.360  Sum_probs=186.4

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc--Cee
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK--RDL  418 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~--~~~  418 (670)
                      ..++|+..+.||+|+||.||+|.+..                  ....+.+|+.+++++ +||||++++++|...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            35678889999999999999997642                  123466899999999 999999999998654  468


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||++ ++|.+++...   .++|..+..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++...
T Consensus        85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~  157 (337)
T cd07852          85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSL  157 (337)
T ss_pred             EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence            99999997 5999988543   68999999999999999999998   89999999999999999999999999999866


Q ss_pred             cCCCc----ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHh--------
Q 035655          499 DHGKI----SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQ--------  564 (670)
Q Consensus       499 ~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~--------  564 (670)
                      .....    .......|+..|+|||.+.+ ..++.++||||||++++||++|+.||...... .........        
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  237 (337)
T cd07852         158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI  237 (337)
T ss_pred             ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            44322    12234578999999998754 45788999999999999999999999753211 111100000        


Q ss_pred             ------hcCCcccccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          565 ------HLGQVLDVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       565 ------~~~~~~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                            ......+.+...-.   ..........+.+++.+||+.+|.+||++.+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence                  00000000000000   00111134567899999999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.98  E-value=1.1e-31  Score=283.32  Aligned_cols=251  Identities=26%  Similarity=0.317  Sum_probs=187.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeecc--CeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~l  420 (670)
                      .++|+..+.||+|+||.||+|.....                  ...+.+|+.++++++|+||+++++++.+.  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            46799999999999999999976431                  12456899999999999999999998754  56899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |+||++ ++|.+++.... ..+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++.....
T Consensus        86 v~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~  160 (309)
T cd07845          86 VMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL  160 (309)
T ss_pred             EEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence            999996 48888886543 468999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc--CCc-------
Q 035655          501 GKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL--GQV-------  569 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~--~~~-------  569 (670)
                      .. .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...........  ...       
T Consensus       161 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (309)
T cd07845         161 PA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL  239 (309)
T ss_pred             cc-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence            32 11223345788999998865 45789999999999999999999999753221 11111110000  000       


Q ss_pred             -----ccccCCCCCC--cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          570 -----LDVVDPNLGS--SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       570 -----~~~~d~~l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                           .......+..  .........+.+++..|++.||++||+++|++++-+-.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~  294 (309)
T cd07845         240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK  294 (309)
T ss_pred             cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence                 0000000000  00001245667899999999999999999999976644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=2e-32  Score=312.99  Aligned_cols=243  Identities=27%  Similarity=0.433  Sum_probs=197.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc------------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeec
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT------------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKR  414 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~------------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~  414 (670)
                      ..+++...+.||+|.||.|++|....                        ..+.+..|+++|+.+ +|+||+.++|+|..
T Consensus       294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~  373 (609)
T KOG0200|consen  294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ  373 (609)
T ss_pred             chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence            34455666799999999999996421                        356889999999998 59999999999999


Q ss_pred             cCeeEEEEeccCCCCchhhcccCC------------c--cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEE
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNE------------N--FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVL  480 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NIL  480 (670)
                      ++..++|.||++.|+|.+||+.++            .  ..++..+.+.++.|||.|++||++   .+++||||.++|||
T Consensus       374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVL  450 (609)
T KOG0200|consen  374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVL  450 (609)
T ss_pred             CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEE
Confidence            999999999999999999998765            0  138899999999999999999999   89999999999999


Q ss_pred             ecCCCcEEEEeecCceeccCCCcceeeccc--cCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhH
Q 035655          481 IDADMNARLGDFGLARLFDHGKISHTTNVV--GTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILV  557 (670)
Q Consensus       481 ld~~~~~kL~DFGla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~  557 (670)
                      +.++..+||+|||+|+...+......+...  -...|||||.+....++.|+||||||++||||++ |..||..-.. ..
T Consensus       451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~  529 (609)
T KOG0200|consen  451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-TE  529 (609)
T ss_pred             ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-HH
Confidence            999999999999999976655544333333  3456999999999999999999999999999999 9999975110 11


Q ss_pred             HHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          558 DWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       558 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +. .+....+..         .+.+..+..++.++++.||+.+|.+||++.|+.+.+..
T Consensus       530 ~l-~~~l~~G~r---------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  530 EL-LEFLKEGNR---------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             HH-HHHHhcCCC---------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            11 222222322         22233345678899999999999999999999999986

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.98  E-value=3.4e-32  Score=281.65  Aligned_cols=234  Identities=26%  Similarity=0.380  Sum_probs=190.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ++|...+.||+|+||.||++....                   ..+.+.+|++++++++ ||||+++++++..++..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            468889999999999999997642                   1345778999999998 99999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++++|.+++.+..  .+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++......
T Consensus        81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~  155 (280)
T cd05581          81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN  155 (280)
T ss_pred             EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence            99999999999997653  69999999999999999999998   89999999999999999999999999999865443


Q ss_pred             Cc-------------------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHH
Q 035655          502 KI-------------------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE  562 (670)
Q Consensus       502 ~~-------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~  562 (670)
                      ..                   .......++..|+|||......++.++||||||++++|+++|+.||........  ...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~  233 (280)
T cd05581         156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT--FQK  233 (280)
T ss_pred             cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH--HHH
Confidence            21                   122234678999999999888899999999999999999999999975431110  001


Q ss_pred             HhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCH----HHHHHH
Q 035655          563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTM----RQVLRY  613 (670)
Q Consensus       563 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~----~evl~~  613 (670)
                      ..   ..    .    ..++....+.+.+++..||+.+|.+||++    ++++++
T Consensus       234 ~~---~~----~----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         234 IL---KL----E----YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             HH---hc----C----CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            00   00    0    11112224567899999999999999999    888764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.98  E-value=1.2e-31  Score=283.51  Aligned_cols=244  Identities=19%  Similarity=0.229  Sum_probs=182.6

Q ss_pred             cceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          367 SEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      .+.+|.|+++.||++....                ..+.+.+|++++++++||||+++++++.+.+..+++|||+++|+|
T Consensus         7 ~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216           7 GKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             hHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence            4445666666666664422                235788999999999999999999999999999999999999999


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc------c
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI------S  504 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~------~  504 (670)
                      .+++.......+++..+..++.|+++||.|||+   .+|+||||||+||+++.++.+||+|||.+........      .
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~  163 (314)
T cd08216          87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD  163 (314)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence            999987655568999999999999999999998   8999999999999999999999999999875532211      1


Q ss_pred             eeeccccCcCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhc--------------CC
Q 035655          505 HTTNVVGTIGYIAPELART--GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHL--------------GQ  568 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~--------------~~  568 (670)
                      ......++..|+|||++..  ..++.++|||||||+++||++|+.||.......... ......              ..
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  242 (314)
T cd08216         164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLL-EKVRGTVPCLLDKSTYPLYEDS  242 (314)
T ss_pred             ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhccCccccccCchhhhcCC
Confidence            1123457789999999865  357899999999999999999999997533211100 000000              00


Q ss_pred             ccc----ccCCC----CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          569 VLD----VVDPN----LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       569 ~~~----~~d~~----l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...    ..++.    ............+.+++.+||+.||.+||++++++++-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p  296 (314)
T cd08216         243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS  296 (314)
T ss_pred             cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence            000    00000    00111223345788899999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.98  E-value=1.3e-31  Score=282.93  Aligned_cols=236  Identities=28%  Similarity=0.395  Sum_probs=186.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      +.|+..+.||+|+||.||+|+...                   ..+++.+|++++++++|+|++++.+++......++|+
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            347777899999999999997532                   1245778999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+. |+|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++...... 
T Consensus        95 e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-  168 (308)
T cd06634          95 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-  168 (308)
T ss_pred             EccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence            9996 68887775433 358999999999999999999998   89999999999999999999999999998765432 


Q ss_pred             cceeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          503 ISHTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                          ....++..|+|||.+.   .+.++.++|||||||+++||++|+.||.......  .... .....     .+... 
T Consensus       169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~-~~~~~-----~~~~~-  235 (308)
T cd06634         169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYH-IAQNE-----SPALQ-  235 (308)
T ss_pred             ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH--HHHH-HhhcC-----CCCcC-
Confidence                2346888999999874   3567889999999999999999999986532111  1111 11111     01111 


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                        .......+.+++.+||+.+|.+||++.+++++..-..
T Consensus       236 --~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         236 --SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             --cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence              1123355778999999999999999999999866443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.98  E-value=5.1e-32  Score=277.56  Aligned_cols=230  Identities=26%  Similarity=0.376  Sum_probs=183.1

Q ss_pred             EeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          370 IGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ||+|+||.||++....                   ..+.+.+|++++++++||||+++++.+..+...++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            5889999999998753                   234677899999999999999999999999999999999999999


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc-------
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-------  503 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~-------  503 (670)
                      .+++.+..  .+++..+.+++.||+.||+|||+   .+++|+||+|+||++++++.+||+|||++........       
T Consensus        81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  155 (265)
T cd05579          81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE  155 (265)
T ss_pred             HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence            99997643  68999999999999999999998   8999999999999999999999999999875543321       


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      .......++..|+|||.......+.++||||||++++||++|+.||......  ........ +..    .  .....  
T Consensus       156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~-~~~----~--~~~~~--  224 (265)
T cd05579         156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--EIFQNILN-GKI----E--WPEDV--  224 (265)
T ss_pred             ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc-CCc----C--CCccc--
Confidence            1223346788999999998888999999999999999999999999754321  11111111 110    0  00000  


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .....+.+++..||+.+|.+||++.++.+.|+
T Consensus       225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            02466788999999999999999955555554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=7e-32  Score=288.67  Aligned_cols=245  Identities=21%  Similarity=0.317  Sum_probs=186.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----Ce
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----RD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~  417 (670)
                      .++|...+.||+|+||.||++....                  ....+.+|+.++++++|+||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            4678999999999999999997532                  234567899999999999999999988654     34


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++|+||+. ++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~  157 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLART  157 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence            899999996 7898888654  359999999999999999999998   8999999999999999999999999999986


Q ss_pred             ccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHHh-----------
Q 035655          498 FDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEFQ-----------  564 (670)
Q Consensus       498 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~~-----------  564 (670)
                      ..... .......++..|+|||.+.. ..++.++|||||||+++||++|+.||...+... ........           
T Consensus       158 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (337)
T cd07858         158 TSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI  236 (337)
T ss_pred             cCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence            64432 22233467889999998765 468899999999999999999999997543210 00000000           


Q ss_pred             hcCCcc-------cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          565 HLGQVL-------DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       565 ~~~~~~-------~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ......       ...++... .........+.+++.+||+.+|.+||++++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         237 RNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             CchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence            000000       00001000 0111234667899999999999999999999998

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=2e-31  Score=278.36  Aligned_cols=235  Identities=25%  Similarity=0.351  Sum_probs=185.2

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCee
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~  418 (670)
                      +|+..+.||+|+||.||++....                       ..+.+.+|+++++++ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            47788999999999999876521                       124567899999999 589999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++...
T Consensus        81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  155 (290)
T cd05613          81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  155 (290)
T ss_pred             EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence            9999999999999999654  358899999999999999999998   89999999999999999999999999999876


Q ss_pred             cCCCcceeeccccCcCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcc--hhHHHHHHHhhcCCcccccC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTG--KASCSTDVFAYGVLLLEIATGRRPIDSDHF--ILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~--~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ............|+..|+|||.+...  .++.++||||||++++||++|+.||.....  ............       .
T Consensus       156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-------~  228 (290)
T cd05613         156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-------E  228 (290)
T ss_pred             ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc-------C
Confidence            54333333345689999999988753  467899999999999999999999964221  111111111111       1


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRY  613 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  613 (670)
                      +.    ++......+.+++..||+.+|.+||     +.++++++
T Consensus       229 ~~----~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         229 PP----YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             CC----CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            11    1122235677899999999999997     67777664

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=6.5e-32  Score=287.59  Aligned_cols=246  Identities=23%  Similarity=0.327  Sum_probs=189.6

Q ss_pred             CccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC-----eeE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR-----DLL  419 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-----~~~  419 (670)
                      +|+..+.||+|++|.||+++...                  ..+.+.+|+.+++.++||||+++.+++....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            47788999999999999997643                  2356889999999999999999999998765     789


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +|+||++ ++|.+++....  .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.++|+|||++....
T Consensus        81 lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~  154 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVD  154 (330)
T ss_pred             EEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence            9999997 58988886543  79999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCc--ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHHhh----------
Q 035655          500 HGKI--SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEFQH----------  565 (670)
Q Consensus       500 ~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~~~----------  565 (670)
                      ....  .......++..|+|||.+.+. .++.++||||||+++++|++|+.||....... .........          
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  234 (330)
T cd07834         155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI  234 (330)
T ss_pred             ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence            5431  123344678899999999887 78999999999999999999999997643211 111100000          


Q ss_pred             -cCCccccc---CCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          566 -LGQVLDVV---DPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       566 -~~~~~~~~---d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                       .......+   .....   ..........+.+++.+||+.+|.+||++++++++-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  290 (330)
T cd07834         235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP  290 (330)
T ss_pred             cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence             00000000   00000   001111345678899999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=1.1e-31  Score=281.55  Aligned_cols=239  Identities=25%  Similarity=0.355  Sum_probs=183.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|+..+.||+|+||.||++....                 ...++..|+.++.++. ||||++++++|.++...++|||
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            567888999999999999998752                 2234667887777775 9999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |++ ++|.+++.... ..+++..+..++.|++.||+|||+  .++++||||+|+||++++++.+||+|||++........
T Consensus        95 ~~~-~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~  170 (296)
T cd06618          95 LMS-TCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA  170 (296)
T ss_pred             ccC-cCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence            985 47777665433 378999999999999999999997  25899999999999999999999999999876543221


Q ss_pred             ceeeccccCcCCCCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          504 SHTTNVVGTIGYIAPELARTGK----ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~----~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                        .....++..|+|||.+.+..    ++.++||||||++++||++|+.||....... +...... ...     .+... 
T Consensus       171 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~-~~~-----~~~~~-  240 (296)
T cd06618         171 --KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-EVLTKIL-QEE-----PPSLP-  240 (296)
T ss_pred             --ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-HHHHHHh-cCC-----CCCCC-
Confidence              12335788999999987553    7889999999999999999999997522211 1111100 011     01110 


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                       ......+.+.+++.+||+.||.+||++++++++..
T Consensus       241 -~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~  275 (296)
T cd06618         241 -PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF  275 (296)
T ss_pred             -CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence             00122356788999999999999999999998654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=9.3e-32  Score=283.16  Aligned_cols=248  Identities=25%  Similarity=0.310  Sum_probs=183.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeecc-------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRK-------  415 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-------  415 (670)
                      .++|+..++||+|+||.||++.....                  ...+.+|++++++++||||+++++++.+.       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            57899999999999999999986431                  13567899999999999999999987543       


Q ss_pred             -CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          416 -RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       416 -~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                       ..+++|+||+.+ +|...+... ...+++.++..++.|+++||.|||+   .+++||||||+||++++++.+||+|||+
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~  161 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGL  161 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCcc
Confidence             346999999965 677766543 3469999999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcc----------eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHH
Q 035655          495 ARLFDHGKIS----------HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLE  562 (670)
Q Consensus       495 a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~  562 (670)
                      ++........          ..+...+++.|+|||.+.+. .++.++|||||||+++||++|+.||...... .......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~  241 (311)
T cd07866         162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK  241 (311)
T ss_pred             chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9765432211          11234678899999987654 5789999999999999999999999753221 1111111


Q ss_pred             Hhhc---------CCccccc----CCCCCCcc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          563 FQHL---------GQVLDVV----DPNLGSSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       563 ~~~~---------~~~~~~~----d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....         ..+....    .+......   .......+.+++.+|++.+|.+||++.|++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            1000         0000000    00000000   01122567899999999999999999999874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.97  E-value=2.4e-31  Score=278.78  Aligned_cols=230  Identities=21%  Similarity=0.306  Sum_probs=184.4

Q ss_pred             cceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          367 SEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ..+||+|+||.||++....                ....+.+|+.++++++|+||+++++.+...+..++||||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            4679999999999997632                234578899999999999999999999999999999999999999


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccc
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV  510 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~  510 (670)
                      .+++..   ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.++|+|||++....... .......
T Consensus       105 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~  177 (292)
T cd06657         105 TDIVTH---TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLV  177 (292)
T ss_pred             HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccc
Confidence            998743   258999999999999999999998   899999999999999999999999999987554322 1223356


Q ss_pred             cCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHH
Q 035655          511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL  590 (670)
Q Consensus       511 gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~  590 (670)
                      |+..|+|||.+.+..++.++||||||++++||++|+.||.......  .......      ...+.+..  .......+.
T Consensus       178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~--~~~~~~~------~~~~~~~~--~~~~~~~l~  247 (292)
T cd06657         178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRD------NLPPKLKN--LHKVSPSLK  247 (292)
T ss_pred             cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh------hCCcccCC--cccCCHHHH
Confidence            8899999999988889999999999999999999999997533211  1111110      01111110  111234567


Q ss_pred             HHHHhhccCCCCCCCCHHHHHHH
Q 035655          591 QLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       591 ~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +++.+||+.+|.+||++.+++++
T Consensus       248 ~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         248 GFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             HHHHHHHhCCcccCcCHHHHhcC
Confidence            88899999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=4.7e-31  Score=279.33  Aligned_cols=231  Identities=26%  Similarity=0.411  Sum_probs=182.1

Q ss_pred             ccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      |...++||+|+||.||+|....                   ..+.+.+|++++++++|||++++++++.+....++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            5556789999999999997532                   124678899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +. |+|.+++.... ..+++.++..++.|++.+|.|||+   .+++|+||||+||+++.++.+||+|||++.....    
T Consensus       103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----  173 (313)
T cd06633         103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----  173 (313)
T ss_pred             CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence            95 57877775433 468999999999999999999998   8999999999999999999999999999864322    


Q ss_pred             eeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       .....|+..|+|||++.   .+.++.++|||||||+++||++|+.||........  ...... ...     +...   
T Consensus       174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~--~~~~~~-~~~-----~~~~---  241 (313)
T cd06633         174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIAQ-NDS-----PTLQ---  241 (313)
T ss_pred             -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHh-cCC-----CCCC---
Confidence             23456889999999874   45688899999999999999999999875432111  111111 111     1111   


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .......+.+++.+||+.+|.+||++.+++++-.
T Consensus       242 ~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~  275 (313)
T cd06633         242 SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDF  275 (313)
T ss_pred             ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence            1112245778999999999999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=5e-32  Score=290.95  Aligned_cols=236  Identities=23%  Similarity=0.363  Sum_probs=196.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ...|.+...||+|.|++|.+++...                  ..+.+.+|+++|+.|+|||||+++.+.+....+|+||
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            4678899999999999999997643                  2355889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+.+|.+.+||.++.+  ........++.|+.++++|||+   +.|+|||||++||||+.++++||+|||++..+..+ 
T Consensus       135 eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~-  208 (596)
T KOG0586|consen  135 EYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG-  208 (596)
T ss_pred             EeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeeccc-
Confidence            99999999999988764  5668888999999999999999   99999999999999999999999999999888754 


Q ss_pred             cceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       ....+.+|++.|.|||++.+.+| .++.|+||+|+++|-|++|..||++...-               +.-++.+.+.+
T Consensus       209 -~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk---------------~Lr~rvl~gk~  272 (596)
T KOG0586|consen  209 -LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK---------------ELRPRVLRGKY  272 (596)
T ss_pred             -ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc---------------cccchheeeee
Confidence             34456799999999999998877 57999999999999999999999863211               11111111111


Q ss_pred             --cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          582 --VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       582 --~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                        +.-....+.++++..+-.+|.+|+++++++++-+...
T Consensus       273 rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~  311 (596)
T KOG0586|consen  273 RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND  311 (596)
T ss_pred             cccceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence              1112345667888899999999999999999876543

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-32  Score=268.46  Aligned_cols=236  Identities=24%  Similarity=0.341  Sum_probs=183.6

Q ss_pred             CccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +.+....||.|.+|.|++++...                 ..+.....+.++.+-+ .|.||+.+|+|..+...++.||.
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel  172 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL  172 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence            34456789999999999998754                 2344555666665554 79999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      |. ..++..|.... .++++..+-++...+..||.||-+  +++|+|||+||+|||+|+.|++||||||++..+-...  
T Consensus       173 Ms-~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk--  246 (391)
T KOG0983|consen  173 MS-TCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--  246 (391)
T ss_pred             HH-HHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccc--
Confidence            94 45666665443 468888888999999999999998  5899999999999999999999999999997665432  


Q ss_pred             eeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ..+..+|.+.|||||.+.   ...|+.++||||||+.++||.||+.||........       ...++++...|.|....
T Consensus       247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe-------~ltkvln~ePP~L~~~~  319 (391)
T KOG0983|consen  247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE-------VLTKVLNEEPPLLPGHM  319 (391)
T ss_pred             ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH-------HHHHHHhcCCCCCCccc
Confidence            334568999999999875   34788999999999999999999999987332211       11112222234443322


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                        .....++++...||++|+.+||...++++|
T Consensus       320 --gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  320 --GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             --CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence              134567888899999999999999999985

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=2.5e-31  Score=283.47  Aligned_cols=249  Identities=22%  Similarity=0.292  Sum_probs=189.1

Q ss_pred             hhHHHhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec-c
Q 035655          355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR-K  415 (670)
Q Consensus       355 ~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-~  415 (670)
                      .++...+++|+..+.||+|+||.||++....                  ..+.+.+|++++++++||||+++.++|.. .
T Consensus         3 ~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   82 (328)
T cd07856           3 GTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL   82 (328)
T ss_pred             cceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence            3556678999999999999999999987432                  23567789999999999999999998865 5


Q ss_pred             CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCc
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA  495 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla  495 (670)
                      ...++|+||+ +++|.+++..   ..+++.....++.|+++||.|||+   .+++||||||+||++++++.+||+|||++
T Consensus        83 ~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~  155 (328)
T cd07856          83 EDIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLA  155 (328)
T ss_pred             CcEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccc
Confidence            6789999998 5689888753   357888899999999999999999   89999999999999999999999999998


Q ss_pred             eeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHH----------
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW-VLEF----------  563 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~-~~~~----------  563 (670)
                      ......    .....++..|+|||.+.+ ..++.++|||||||+++||++|+.||.......... ....          
T Consensus       156 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  231 (328)
T cd07856         156 RIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN  231 (328)
T ss_pred             cccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            754332    123457889999998766 568999999999999999999999997543211100 0000          


Q ss_pred             -hhcCCccccc-CCCCCCccc-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          564 -QHLGQVLDVV-DPNLGSSYV-----VAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       564 -~~~~~~~~~~-d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                       .......+.. ........+     ......+.+++..|++.+|.+||++.+++.+-
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~  289 (328)
T cd07856         232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP  289 (328)
T ss_pred             hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence             0000000000 000001111     11236788999999999999999999999873

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.97  E-value=2.8e-31  Score=276.05  Aligned_cols=228  Identities=25%  Similarity=0.288  Sum_probs=176.4

Q ss_pred             eEeeeCceeEEEeeccch-------------------HHHHHHHHH---HHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          369 VIGTGGFGEVYKGVLPTR-------------------MREFAAEIE---SLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       369 ~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~---~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .||+|+||.||++.....                   ...+..|..   .++...||||+++.+++...+..++|+||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999998875321                   112344443   3444579999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +|+|.+++...  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......   .
T Consensus        81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~  152 (278)
T cd05606          81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---P  152 (278)
T ss_pred             CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---C
Confidence            99999988643  469999999999999999999998   899999999999999999999999999987553321   2


Q ss_pred             eccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....|+..|+|||.+.++ .++.++||||+||+++||++|+.||...............      ...++.+..    ..
T Consensus       153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~----~~  222 (278)
T cd05606         153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT------LTMAVELPD----SF  222 (278)
T ss_pred             cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh------hccCCCCCC----cC
Confidence            234689999999998754 6899999999999999999999999764221111111111      011122211    22


Q ss_pred             HHHHHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          586 MELVLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      ...+.+++..|++.+|.+||     ++.+++++-
T Consensus       223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~  256 (278)
T cd05606         223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP  256 (278)
T ss_pred             CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence            35678889999999999999     999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=5.5e-31  Score=282.78  Aligned_cols=256  Identities=21%  Similarity=0.317  Sum_probs=191.6

Q ss_pred             CCccchhhHHHhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeee
Q 035655          349 PHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQG  410 (670)
Q Consensus       349 ~~~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g  410 (670)
                      +++....++...+++|...+.||+|+||.||++....                  ..+.+.+|+.++++++||||+++.+
T Consensus         4 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~   83 (345)
T cd07877           4 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD   83 (345)
T ss_pred             chhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence            3455566778889999999999999999999997532                  1245778999999999999999999


Q ss_pred             eeecc------CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC
Q 035655          411 WCKRK------RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD  484 (670)
Q Consensus       411 ~~~~~------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~  484 (670)
                      ++...      ...+++++++ +++|.+++..   ..+++..+..++.|+++||+|||+   .+++||||||+||+++++
T Consensus        84 ~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~  156 (345)
T cd07877          84 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED  156 (345)
T ss_pred             eeeecccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCC
Confidence            88543      3467888876 7899888753   258999999999999999999998   899999999999999999


Q ss_pred             CcEEEEeecCceeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHH
Q 035655          485 MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLE  562 (670)
Q Consensus       485 ~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~  562 (670)
                      +.+||+|||+++.....    .....++..|+|||.+.+ ..++.++|||||||+++||++|+.||...... .......
T Consensus       157 ~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~  232 (345)
T cd07877         157 CELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR  232 (345)
T ss_pred             CCEEEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            99999999998754332    233467899999998866 56788999999999999999999999653211 1110000


Q ss_pred             Hhhc--CCc------------ccccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          563 FQHL--GQV------------LDVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       563 ~~~~--~~~------------~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ....  ...            ....+....   ..........+.+++..|++.||.+||++.+++++-.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~  302 (345)
T cd07877         233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY  302 (345)
T ss_pred             HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence            0000  000            000000000   0000012345778999999999999999999998754

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.8e-31  Score=270.17  Aligned_cols=227  Identities=23%  Similarity=0.222  Sum_probs=175.0

Q ss_pred             ceEeeeCceeEEEeeccch-------------------HHHHHHHHHH-HhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPTR-------------------MREFAAEIES-LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~-L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +.||+|+||.||+|.....                   ...+..|..+ ....+|+|++++++++..++..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5689999999999976321                   1223344444 3455899999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|.+++...  ..+++..+..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||+++....     ..
T Consensus        82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~  151 (260)
T cd05611          82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NK  151 (260)
T ss_pred             CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc-----cc
Confidence            9999999654  358999999999999999999998   8999999999999999999999999999875433     22


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...++..|+|||.+.+..++.++||||||++++||++|..||........   ..........  ..+    ........
T Consensus       152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~--~~~----~~~~~~~~  222 (260)
T cd05611         152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV---FDNILSRRIN--WPE----EVKEFCSP  222 (260)
T ss_pred             cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH---HHHHHhcccC--CCC----cccccCCH
Confidence            34688899999999888889999999999999999999999975432211   1111111100  011    11112335


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .+.+++..||+.+|++||++.++.+.
T Consensus       223 ~~~~~i~~~l~~~p~~R~~~~~~~~~  248 (260)
T cd05611         223 EAVDLINRLLCMDPAKRLGANGYQEI  248 (260)
T ss_pred             HHHHHHHHHccCCHHHccCCCcHHHH
Confidence            67889999999999999976544443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-31  Score=278.88  Aligned_cols=234  Identities=20%  Similarity=0.291  Sum_probs=197.3

Q ss_pred             CccccceEeeeCceeEEEeec-------------cc-----hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVL-------------PT-----RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~-------------~~-----~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      -|...+.||+|.|..|-+++.             +.     ....+.+|++.|+.++|||||+|+.+......+|||+|+
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            366778899999999876643             11     235677999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec-CCCcEEEEeecCceeccCCCc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID-ADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld-~~~~~kL~DFGla~~~~~~~~  503 (670)
                      -.+|+|.+||.+++. .+.+....+++.||+.|+.|+|+   ..+|||||||+|+.+- .-|-+||.|||++..+.++. 
T Consensus        99 GD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~-  173 (864)
T KOG4717|consen   99 GDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK-  173 (864)
T ss_pred             cCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCcc-
Confidence            999999999988764 69999999999999999999998   8999999999999874 56789999999998777654 


Q ss_pred             ceeeccccCcCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          504 SHTTNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t-~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       ..++.+|.+.|-|||++.+..|+ +..||||||+|||-|+||+.||+....           .+.+..++|-++  ..+
T Consensus       174 -kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND-----------SETLTmImDCKY--tvP  239 (864)
T KOG4717|consen  174 -KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND-----------SETLTMIMDCKY--TVP  239 (864)
T ss_pred             -hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc-----------hhhhhhhhcccc--cCc
Confidence             45667999999999999999885 689999999999999999999985221           122333444433  345


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .....++.+|+..||..||.+|.+.+||+.+-|
T Consensus       240 shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W  272 (864)
T KOG4717|consen  240 SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW  272 (864)
T ss_pred             hhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence            566788899999999999999999999998755

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1e-30  Score=280.38  Aligned_cols=242  Identities=24%  Similarity=0.359  Sum_probs=184.8

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC----
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR----  416 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~----  416 (670)
                      ...++|+..+.||+|+||.||++....                  ..+.+.+|+.++++++||||+++++++....    
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            356789999999999999999997532                  1235778999999999999999999987553    


Q ss_pred             --eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          417 --DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       417 --~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                        ..++|+||+ +++|.+++..   ..+++..+..++.|++.||+|||+   .+|+||||||+||+++.++.+||+|||+
T Consensus        92 ~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~  164 (343)
T cd07880          92 FHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL  164 (343)
T ss_pred             cceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence              469999999 7799888753   358999999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHH-hhcCCc---
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEF-QHLGQV---  569 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~-~~~~~~---  569 (670)
                      +......    .....+++.|+|||.+.+ ..++.++|+|||||++++|++|+.||......  ...... ......   
T Consensus       165 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~  238 (343)
T cd07880         165 ARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL--DQLMEIMKVTGTPSKE  238 (343)
T ss_pred             ccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHH
Confidence            9765432    223467889999998876 45789999999999999999999999753321  000000 000000   


Q ss_pred             -------------ccccCCCCC----CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          570 -------------LDVVDPNLG----SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       570 -------------~~~~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                                   ...+ +...    ..........+.+++.+|++.||.+||++.+++++-
T Consensus       239 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~  299 (343)
T cd07880         239 FVQKLQSEDAKNYVKKL-PRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP  299 (343)
T ss_pred             HHHhhcchhHHHHHHhc-cccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence                         0000 0000    001112234578899999999999999999999653

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=3.7e-31  Score=274.38  Aligned_cols=244  Identities=26%  Similarity=0.330  Sum_probs=186.6

Q ss_pred             ccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      |+..+.||+|++|.||+|+...                  ..+.+..|+.++++++|+||+++++++...+..++|+||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            4567889999999999997653                  1245778999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      + ++|.+++.... ..+++..+.+++.|++.||.|||+   .+++||||+|+||++++++.+||+|||+++....... .
T Consensus        81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~  154 (282)
T cd07829          81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-T  154 (282)
T ss_pred             C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-c
Confidence            7 59999997653 369999999999999999999999   8999999999999999999999999999986644322 2


Q ss_pred             eeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhh---------cCCc--ccc
Q 035655          506 TTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQH---------LGQV--LDV  572 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~---------~~~~--~~~  572 (670)
                      .....++..|+|||.+.+. .++.++|||||||+++||++|+.||...... ..........         ....  .+.
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (282)
T cd07829         155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP  234 (282)
T ss_pred             cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence            2233567789999998766 7899999999999999999999999764321 1111100000         0000  000


Q ss_pred             cCCCCCC----cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          573 VDPNLGS----SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       573 ~d~~l~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .-+....    ...+.....+.+++..||+.+|++||++++++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            0001000    0011124568899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.4e-31  Score=285.26  Aligned_cols=245  Identities=20%  Similarity=0.313  Sum_probs=186.7

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe---
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD---  417 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~---  417 (670)
                      ...++|+..+.||+|++|.||+|....                  ..+.+.+|+.++++++||||+++.+++...+.   
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence            456789999999999999999997643                  12446689999999999999999998866554   


Q ss_pred             ---eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          418 ---LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       418 ---~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                         .++|+||+ +++|.+++..   ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+
T Consensus        92 ~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851          92 FQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             cccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccc
Confidence               89999998 6799998854   358999999999999999999998   8999999999999999999999999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc------
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL------  566 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~------  566 (670)
                      +......    .....++..|+|||.+.+ ..++.++|||||||+++||++|+.||...... ...........      
T Consensus       165 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~  240 (343)
T cd07851         165 ARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL  240 (343)
T ss_pred             ccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence            9865432    233467889999998865 36789999999999999999999999753321 01100000000      


Q ss_pred             --------CCcccccCCCCCCcc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          567 --------GQVLDVVDPNLGSSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       567 --------~~~~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                              ......+.......+   .......+.+++.+|++++|.+||++.+++++-
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~  299 (343)
T cd07851         241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHP  299 (343)
T ss_pred             hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCC
Confidence                    000000000000011   011246788999999999999999999999864

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=1.2e-31  Score=304.68  Aligned_cols=238  Identities=26%  Similarity=0.420  Sum_probs=178.9

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch-----------------HHHHHHHHHHHhccccCceeeeeeeeec--------
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLRHKHLVNLQGWCKR--------  414 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~-----------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--------  414 (670)
                      -..+|++.+.||+||||.|||++.+-+                 .....+|+..|++|+|||||+++..+.+        
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            346799999999999999999986432                 2446689999999999999999874410        


Q ss_pred             --------------------------------------------------------------------------------
Q 035655          415 --------------------------------------------------------------------------------  414 (670)
Q Consensus       415 --------------------------------------------------------------------------------  414 (670)
                                                                                                      
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------c--------CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccc
Q 035655          415 -----------------------K--------RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE  463 (670)
Q Consensus       415 -----------------------~--------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~  463 (670)
                                             +        ..+||=||||+...|++++.++.... .-...++++.+|++||+|+|+
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~  715 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHD  715 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHh
Confidence                                   0        12688899999988888886653211 456788999999999999999


Q ss_pred             cccceEEecccCCCcEEecCCCcEEEEeecCceecc----------------CC-CcceeeccccCcCCCCccccccC--
Q 035655          464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD----------------HG-KISHTTNVVGTIGYIAPELARTG--  524 (670)
Q Consensus       464 ~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~----------------~~-~~~~~~~~~gt~~y~aPE~~~~~--  524 (670)
                         ++||||||||.||+||++..|||+|||+|....                .+ .....+..+||.-|+|||++.+.  
T Consensus       716 ---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~  792 (1351)
T KOG1035|consen  716 ---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS  792 (1351)
T ss_pred             ---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence               899999999999999999999999999998621                00 11234567999999999998764  


Q ss_pred             -CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCC
Q 035655          525 -KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEA  603 (670)
Q Consensus       525 -~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~  603 (670)
                       +|+.|+|+||+|||++||+.   ||...... +. +....+.+.+...      ..+...++..-.+++.++++.||.+
T Consensus       793 ~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER-a~-iL~~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll~hdP~k  861 (1351)
T KOG1035|consen  793 NKYNSKIDMYSLGIVLFEMLY---PFGTSMER-AS-ILTNLRKGSIPEP------ADFFDPEHPEEASLIRWLLSHDPSK  861 (1351)
T ss_pred             ccccchhhhHHHHHHHHHHhc---cCCchHHH-HH-HHHhcccCCCCCC------cccccccchHHHHHHHHHhcCCCcc
Confidence             49999999999999999986   56642211 11 1111111111111      2233344455568899999999999


Q ss_pred             CCCHHHHHH
Q 035655          604 RPTMRQVLR  612 (670)
Q Consensus       604 RPs~~evl~  612 (670)
                      |||+.|+++
T Consensus       862 RPtA~eLL~  870 (1351)
T KOG1035|consen  862 RPTATELLN  870 (1351)
T ss_pred             CCCHHHHhh
Confidence            999999986

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=7.9e-31  Score=280.04  Aligned_cols=248  Identities=21%  Similarity=0.270  Sum_probs=185.6

Q ss_pred             cCccc-cceEeeeCceeEEEeeccch-------------H-----------------HHHHHHHHHHhccccCceeeeee
Q 035655          362 KGFKQ-SEVIGTGGFGEVYKGVLPTR-------------M-----------------REFAAEIESLGRLRHKHLVNLQG  410 (670)
Q Consensus       362 ~~f~~-~~~lG~G~fg~Vykg~~~~~-------------~-----------------~~f~~Ei~~L~~l~H~nIv~l~g  410 (670)
                      ++|.. .+.||+|+||.||++.....             .                 ..+.+|++++++++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            44543 46799999999999975420             0                 13678999999999999999999


Q ss_pred             eeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEE
Q 035655          411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLG  490 (670)
Q Consensus       411 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~  490 (670)
                      ++...+..++||||++ |+|.+++...  ..+++.....++.|++.||.|||+   .+++|+||||+||+++.++.+||+
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~  161 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIA  161 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEEC
Confidence            9999999999999996 6999988543  358999999999999999999998   899999999999999999999999


Q ss_pred             eecCceeccCCC-------------cceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-
Q 035655          491 DFGLARLFDHGK-------------ISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-  555 (670)
Q Consensus       491 DFGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-  555 (670)
                      |||++.......             ........++..|+|||.+.+. .++.++|||||||+++||++|+.||...... 
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~  241 (335)
T PTZ00024        162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID  241 (335)
T ss_pred             CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            999998665111             1111223568899999988764 4689999999999999999999999764321 


Q ss_pred             hHHHHHHHhhcCC---ccc------------ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          556 LVDWVLEFQHLGQ---VLD------------VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       556 ~~~~~~~~~~~~~---~~~------------~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ....+........   ...            ...+.. ..........+.+++..||+.+|.+||+++|++.+-+-
T Consensus       242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~  316 (335)
T PTZ00024        242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDL-KTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF  316 (335)
T ss_pred             HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccH-HHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence            1111111100000   000            000000 00011124567899999999999999999999987654

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=5.6e-31  Score=282.29  Aligned_cols=248  Identities=23%  Similarity=0.309  Sum_probs=181.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeecc---------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK---------  415 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~---------  415 (670)
                      ..+|...+.||+|+||.||+|....                ..+.+.+|++++++++||||+++++.+...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            3678999999999999999997643                235688999999999999999999876543         


Q ss_pred             -----CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-CCcEEE
Q 035655          416 -----RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARL  489 (670)
Q Consensus       416 -----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-~~~~kL  489 (670)
                           ...++|+||++ ++|.+++..   ..+++..+..++.||+.||.|||+   .+++||||||+||+++. ++.+||
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl  156 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKI  156 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEE
Confidence                 35799999997 589888743   358999999999999999999998   89999999999999974 557899


Q ss_pred             EeecCceeccCCCcc--eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-H-HHHHHh
Q 035655          490 GDFGLARLFDHGKIS--HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-D-WVLEFQ  564 (670)
Q Consensus       490 ~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~-~~~~~~  564 (670)
                      +|||+++........  ......++..|+|||.+.. ..++.++|||||||+++||++|+.||........ . ......
T Consensus       157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~  236 (342)
T cd07854         157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP  236 (342)
T ss_pred             CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence            999999765432111  1123367889999997654 4678899999999999999999999975322110 0 000000


Q ss_pred             -----hcCCccccc---------CCCC-CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          565 -----HLGQVLDVV---------DPNL-GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       565 -----~~~~~~~~~---------d~~l-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                           .........         .+.. ...........+.+++..||+.||.+||++.|++++-.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~  302 (342)
T cd07854         237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPY  302 (342)
T ss_pred             CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCc
Confidence                 000000000         0000 00001122356788999999999999999999997643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-30  Score=264.76  Aligned_cols=224  Identities=27%  Similarity=0.334  Sum_probs=182.2

Q ss_pred             EeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          370 IGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ||+|+||.||++....                   ....+..|++++++++||||+++++.+..+...++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6899999999987642                   223678899999999999999999999999999999999999999


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccc
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV  510 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~  510 (670)
                      .+++....  .+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++....... .......
T Consensus        81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~  154 (250)
T cd05123          81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFC  154 (250)
T ss_pred             HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCc
Confidence            99996553  58999999999999999999998   999999999999999999999999999998664432 1233456


Q ss_pred             cCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHH
Q 035655          511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL  590 (670)
Q Consensus       511 gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~  590 (670)
                      ++..|++||...+...+.++|+||||++++|+++|+.||...+..  ........ .      ..    .++......+.
T Consensus       155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~-~------~~----~~~~~~~~~l~  221 (250)
T cd05123         155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK--EIYEKILK-D------PL----RFPEFLSPEAR  221 (250)
T ss_pred             CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHhc-C------CC----CCCCCCCHHHH
Confidence            889999999998888899999999999999999999999754321  11111110 0      01    11112245678


Q ss_pred             HHHHhhccCCCCCCCCH---HHHHH
Q 035655          591 QLGLLCSHQKAEARPTM---RQVLR  612 (670)
Q Consensus       591 ~l~~~Cl~~dP~~RPs~---~evl~  612 (670)
                      +++..||..||.+||++   +++++
T Consensus       222 ~~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         222 DLISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             HHHHHHhcCCHhhCCCcccHHHHHh
Confidence            89999999999999999   56554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=2.4e-30  Score=276.13  Aligned_cols=245  Identities=23%  Similarity=0.314  Sum_probs=181.2

Q ss_pred             CccccceEeeeCceeEEEeeccch--------------------HHHHHHHHHHHhcc-ccCceeeeeeeeecc----Ce
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTR--------------------MREFAAEIESLGRL-RHKHLVNLQGWCKRK----RD  417 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~--------------------~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~----~~  417 (670)
                      +|+..+.||+|+||.||++.....                    .+.+.+|+.+++++ +||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            477889999999999999986432                    24567899999999 499999999975432    45


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++++||+. ++|.+++...  ..+++..+..++.||+.||.|||+   .+++||||||+||+++.++.+||+|||+++.
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~  154 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARG  154 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence            788889885 6899988543  458999999999999999999998   8999999999999999999999999999986


Q ss_pred             ccCCCcc---eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHH---------
Q 035655          498 FDHGKIS---HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEF---------  563 (670)
Q Consensus       498 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~---------  563 (670)
                      .......   ......||..|+|||.+.+ ..++.++|||||||++++|++|+.||...... ........         
T Consensus       155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  234 (332)
T cd07857         155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL  234 (332)
T ss_pred             cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            5432211   1233478999999998765 46889999999999999999999999753311 11000000         


Q ss_pred             --hhcCCc---ccccC--CCC-CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          564 --QHLGQV---LDVVD--PNL-GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       564 --~~~~~~---~~~~d--~~l-~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                        ......   .....  +.. ...........+.+++.+|++.||.+||++.+++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence              000000   00000  000 000001123567889999999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.97  E-value=2.4e-31  Score=263.39  Aligned_cols=250  Identities=28%  Similarity=0.339  Sum_probs=186.1

Q ss_pred             cCccccceEeeeCceeEEEeeccch---------HHH-------------HHHHHHHHhccccCceeeeeeeeec-cCee
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR---------MRE-------------FAAEIESLGRLRHKHLVNLQGWCKR-KRDL  418 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~---------~~~-------------f~~Ei~~L~~l~H~nIv~l~g~~~~-~~~~  418 (670)
                      ..|+.+..||+|.||.|||+.-.++         .+.             ..+|+.+++.|+|||++.|..++.. +...
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            4578889999999999999964331         122             2389999999999999999999876 7789


Q ss_pred             EEEEeccCCCCchhhcccC---CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC----CcEEEEe
Q 035655          419 LLVYDYIPNGSLDSLLFDN---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD----MNARLGD  491 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~----~~~kL~D  491 (670)
                      ++++||.+. +|...|+-+   ....++...+..|+.||+.|+.|||+   +=|+||||||.|||+..+    |.|||+|
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaD  179 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIAD  179 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeec
Confidence            999999976 888887543   23568999999999999999999999   789999999999999888    8999999


Q ss_pred             ecCceeccCCCcc--eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-------H-HH
Q 035655          492 FGLARLFDHGKIS--HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-------D-WV  560 (670)
Q Consensus       492 FGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-------~-~~  560 (670)
                      +|+++.+...-.+  ....++-|..|.|||++.+. .||.+.||||.|||+.||++-++.|...+..+.       + ..
T Consensus       180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~  259 (438)
T KOG0666|consen  180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD  259 (438)
T ss_pred             ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence            9999988664322  23456789999999998876 589999999999999999998877765221111       0 01


Q ss_pred             HHHhhcCCcccccCCCCC--Ccc------------cH----H-------HHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          561 LEFQHLGQVLDVVDPNLG--SSY------------VV----A-------EMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       561 ~~~~~~~~~~~~~d~~l~--~~~------------~~----~-------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +-+...+-..+..-|.+.  .++            +.    .       -....++|...+++.||.+|.|.++.+++.-
T Consensus       260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y  339 (438)
T KOG0666|consen  260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY  339 (438)
T ss_pred             HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence            111111111111111110  000            00    0       0112567888899999999999999999754

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=6.7e-31  Score=285.72  Aligned_cols=183  Identities=33%  Similarity=0.546  Sum_probs=159.0

Q ss_pred             ccccceEeeeCceeEEEeeccch-----------------HHHHHHHHHHHhccccCceeeeeeeeeccC------eeEE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKR------DLLL  420 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~~-----------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------~~~l  420 (670)
                      +...+.||+|+||.||+|+.+..                 .+...+|+++|++|+|+|||++.+.=++..      ...+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            44567899999999999997552                 234458999999999999999999866544      5689


Q ss_pred             EEeccCCCCchhhcccCC-ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec--CCCc--EEEEeecCc
Q 035655          421 VYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID--ADMN--ARLGDFGLA  495 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld--~~~~--~kL~DFGla  495 (670)
                      |||||.+|||+..|.+.+ ...|++.+.+.++.+++.||.|||+   ++|+||||||.||++-  ++|+  -||+|||.|
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            999999999999998744 3569999999999999999999998   9999999999999983  3343  599999999


Q ss_pred             eeccCCCcceeeccccCcCCCCccccc-cCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELAR-TGKASCSTDVFAYGVLLLEIATGRRPIDS  551 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~el~tG~~pf~~  551 (670)
                      +..+.+.  .....+||..|++||++. .+.|+...|.|||||++||++||..||..
T Consensus       172 rel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  172 RELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             ccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence            9887654  567789999999999998 48899999999999999999999999976

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=8e-31  Score=258.64  Aligned_cols=251  Identities=25%  Similarity=0.305  Sum_probs=196.3

Q ss_pred             hcCcccc-ceEeeeCceeEEEeeccchHHHHH-----------HHHHHHhcc-ccCceeeeeeeeec----cCeeEEEEe
Q 035655          361 TKGFKQS-EVIGTGGFGEVYKGVLPTRMREFA-----------AEIESLGRL-RHKHLVNLQGWCKR----KRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~-~~lG~G~fg~Vykg~~~~~~~~f~-----------~Ei~~L~~l-~H~nIv~l~g~~~~----~~~~~lV~E  423 (670)
                      |++|++. ++||-|-.|+|-.+..+...+.|.           +|++.--+. .|||||+++++++.    ...+++|||
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE  139 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVME  139 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeee
Confidence            4455543 578999999999999888666554           677665444 59999999999864    356899999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC---CCcEEEEeecCceeccC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDH  500 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~---~~~~kL~DFGla~~~~~  500 (670)
                      +|+||.|.+.+.+++...+++.++-+|++||+.|+.|||+   ..|.||||||+|+|...   |-.+||+|||+|+....
T Consensus       140 ~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~  216 (400)
T KOG0604|consen  140 CMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE  216 (400)
T ss_pred             cccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccccccccCC
Confidence            9999999999999888899999999999999999999999   99999999999999964   44689999999986553


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      .  ....+.+-|+.|.|||++...+|+...|+||+||++|-|+||..||...... +..-.+.....+..      .+..
T Consensus       217 ~--~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy------~FP~  288 (400)
T KOG0604|consen  217 P--GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQY------EFPE  288 (400)
T ss_pred             C--ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCc------cCCC
Confidence            2  2345568899999999999999999999999999999999999999763321 11111111111111      1122


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc--CCCCCCC
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN--GDELLPI  622 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~--~~~~~p~  622 (670)
                      +-.....+...+++...|..+|.+|-|+.|++++-+  +...+|.
T Consensus       289 pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~  333 (400)
T KOG0604|consen  289 PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQ  333 (400)
T ss_pred             hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCC
Confidence            233455677888999999999999999999999754  3344444

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=3.8e-30  Score=291.63  Aligned_cols=250  Identities=21%  Similarity=0.237  Sum_probs=166.3

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch----H---------HHHHHHHHHHhccc---cCceeeeeee------eeccCe
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR----M---------REFAAEIESLGRLR---HKHLVNLQGW------CKRKRD  417 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~----~---------~~f~~Ei~~L~~l~---H~nIv~l~g~------~~~~~~  417 (670)
                      ..++|+..++||+|+||.||+|++...    .         +.-..|+.+..+++   +.++..+...      +.....
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE  209 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence            567899999999999999999987543    1         11112333333333   2233222221      245678


Q ss_pred             eEEEEeccCCCCchhhcccCCcc------------------ccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcE
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENF------------------VLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV  479 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NI  479 (670)
                      .++|+||+++++|.+++......                  ...+..+..++.|++.||.|||+   ++|+||||||+||
T Consensus       210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP~NI  286 (566)
T PLN03225        210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKPQNI  286 (566)
T ss_pred             eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCHHHE
Confidence            99999999999999998653210                  11234456899999999999998   8999999999999


Q ss_pred             EecC-CCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccC----------------------CCCccchhHHHH
Q 035655          480 LIDA-DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG----------------------KASCSTDVFAYG  536 (670)
Q Consensus       480 Lld~-~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~t~ksDV~S~G  536 (670)
                      |++. ++.+||+|||+++..............+++.|||||.+...                      .++.++||||||
T Consensus       287 Ll~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlG  366 (566)
T PLN03225        287 IFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAG  366 (566)
T ss_pred             EEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHH
Confidence            9986 57999999999986654443344556889999999965322                      234567999999


Q ss_pred             HHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC----cccccCCCCCCc----c--cHHHHHHHHHHHHhhccCCCCCCCC
Q 035655          537 VLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ----VLDVVDPNLGSS----Y--VVAEMELVLQLGLLCSHQKAEARPT  606 (670)
Q Consensus       537 vvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~----~~~~~d~~l~~~----~--~~~~~~~l~~l~~~Cl~~dP~~RPs  606 (670)
                      |++|||+++..+++..   +..+.......+.    ......+....+    +  .........+|+.+|++.||++|||
T Consensus       367 viL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t  443 (566)
T PLN03225        367 LIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS  443 (566)
T ss_pred             HHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence            9999999987775432   1111111111110    001111111000    0  0001223457999999999999999


Q ss_pred             HHHHHHHhc
Q 035655          607 MRQVLRYLN  615 (670)
Q Consensus       607 ~~evl~~L~  615 (670)
                      ++|+++|-.
T Consensus       444 a~e~L~Hpf  452 (566)
T PLN03225        444 AKAALAHPY  452 (566)
T ss_pred             HHHHhCCcC
Confidence            999999743

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=2.8e-30  Score=262.06  Aligned_cols=209  Identities=17%  Similarity=0.131  Sum_probs=167.5

Q ss_pred             eCceeEEEeeccch-----------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccc
Q 035655          373 GGFGEVYKGVLPTR-----------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV  441 (670)
Q Consensus       373 G~fg~Vykg~~~~~-----------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~  441 (670)
                      |.+|.||++.+...           ...+..|...+....||||+++++++.+.+..++||||+++|+|.+++.+..  .
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~   81 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL--N   81 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc--C
Confidence            78999999887542           2245567666667789999999999999999999999999999999986543  5


Q ss_pred             cCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCcccc
Q 035655          442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA  521 (670)
Q Consensus       442 l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~  521 (670)
                      +++..+..++.|+++||.|||+   .+++||||||+||+++.++.++++|||++......    .....++..|+|||.+
T Consensus        82 l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~aPE~~  154 (237)
T cd05576          82 IPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCAPEVG  154 (237)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccCCccc
Confidence            8999999999999999999998   89999999999999999999999999988655432    1223457789999999


Q ss_pred             ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCC
Q 035655          522 RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKA  601 (670)
Q Consensus       522 ~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP  601 (670)
                      ....++.++||||+|++++||++|+.|+.......             .......    .+......+.+++.+|++.||
T Consensus       155 ~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------~~~~~~~----~~~~~~~~~~~li~~~l~~dp  217 (237)
T cd05576         155 GISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------------NTHTTLN----IPEWVSEEARSLLQQLLQFNP  217 (237)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------ccccccC----CcccCCHHHHHHHHHHccCCH
Confidence            88889999999999999999999998875321100             0000001    111223567789999999999


Q ss_pred             CCCCCH
Q 035655          602 EARPTM  607 (670)
Q Consensus       602 ~~RPs~  607 (670)
                      .+||++
T Consensus       218 ~~R~~~  223 (237)
T cd05576         218 TERLGA  223 (237)
T ss_pred             HHhcCC
Confidence            999996

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=9.3e-30  Score=295.12  Aligned_cols=131  Identities=31%  Similarity=0.460  Sum_probs=119.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|.+.++||+|+||.||+|....                   ....+.+|+.+++.++||||+++++++......++|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            3578999999999999999998752                   125678899999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      |||+++++|.+++...  ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            9999999999999654  358899999999999999999998   899999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.97  E-value=8.2e-30  Score=259.06  Aligned_cols=246  Identities=22%  Similarity=0.319  Sum_probs=194.9

Q ss_pred             hhhHHHhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeee
Q 035655          354 YSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGW  411 (670)
Q Consensus       354 ~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~  411 (670)
                      .+++.....+++...++-+|.||.||+|++.+                      +...+..|-..+..+.|||+.++.++
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            34555556678888899999999999997654                      12335567777888899999999999


Q ss_pred             eecc-CeeEEEEeccCCCCchhhccc------CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC
Q 035655          412 CKRK-RDLLLVYDYIPNGSLDSLLFD------NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD  484 (670)
Q Consensus       412 ~~~~-~~~~lV~E~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~  484 (670)
                      +.+. ...+.+|.++.-|+|..||..      +..+.++..+...++.|++.|++|||.   .+|||.||.++|+++|+.
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~  432 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQ  432 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhh
Confidence            8765 568999999999999999972      223468888999999999999999998   999999999999999999


Q ss_pred             CcEEEEeecCceeccCCCcce-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcc-hhHHHHH
Q 035655          485 MNARLGDFGLARLFDHGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHF-ILVDWVL  561 (670)
Q Consensus       485 ~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~-~~~~~~~  561 (670)
                      .++||+|=.+++..-+.+... ......+..||+||.+.+..|+..+||||||+++|||+| |+.|+..-+. +...+.+
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk  512 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK  512 (563)
T ss_pred             eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh
Confidence            999999999998654433222 222345678999999999999999999999999999999 9999865322 2222211


Q ss_pred             HHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          562 EFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       562 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .    +.       ++  ..+..++.++..++.-||...|++||+++|++.-|.
T Consensus       513 d----Gy-------Rl--aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs  553 (563)
T KOG1024|consen  513 D----GY-------RL--AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLS  553 (563)
T ss_pred             c----cc-------ee--cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence            1    11       11  123345677889999999999999999999998875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.2e-30  Score=279.68  Aligned_cols=232  Identities=21%  Similarity=0.249  Sum_probs=186.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccchHHHH------------HHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREF------------AAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~~~~f------------~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +..|.....+|.|+|+.|-++......+++            .+|+.++.+. +||||+++.+.+.++.+.++|||++.+
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g  400 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDG  400 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccc
Confidence            566777788999999999999876643333            3577666655 699999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe-cCCCcEEEEeecCceeccCCCccee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI-DADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl-d~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +-|.+.+.....  .. .++..|+.+|+.++.|||+   ++||||||||+|||+ ++.++++|+|||.++.....    .
T Consensus       401 ~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~----~  470 (612)
T KOG0603|consen  401 GELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS----C  470 (612)
T ss_pred             cHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh----h
Confidence            888777755432  23 7777899999999999999   999999999999999 68999999999999876654    3


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...+-|..|.|||++....|++++|+||||++||+|++|+.||...... .+ .....            ..+.+.....
T Consensus       471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~e-i~~~i------------~~~~~s~~vS  536 (612)
T KOG0603|consen  471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IE-IHTRI------------QMPKFSECVS  536 (612)
T ss_pred             cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HH-HHHhh------------cCCccccccC
Confidence            3446788999999999999999999999999999999999999753222 00 00001            1122223445


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +...+|+.+||+.||.+||+|.++..+-+.
T Consensus       537 ~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  537 DEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            667788899999999999999999998765

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-30  Score=256.38  Aligned_cols=233  Identities=24%  Similarity=0.292  Sum_probs=186.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccchH-------------------HHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTRM-------------------REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~~-------------------~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..++||+|.||+|-+++.+...                   ..-..|-++|+..+||.+..|.-.|+..+.+|+|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            467888999999999999998765421                   1123577899999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||..||.|.-+|.+.  ..+++...+-+-..|..||.|||+   ++||.||||.+|.|||.+|.+||.||||++.-- .
T Consensus       247 MeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-~  320 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-K  320 (516)
T ss_pred             EEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcc-c
Confidence            9999999999999553  468998888899999999999999   999999999999999999999999999997432 2


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc-chhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH-FILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      ....+.+.+||+.|+|||++....|....|-|.+|+|+|||+||+.||...+ ..+-+.+..  .        |-    .
T Consensus       321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~--e--------d~----k  386 (516)
T KOG0690|consen  321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM--E--------DL----K  386 (516)
T ss_pred             ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh--h--------hc----c
Confidence            2345677899999999999999999999999999999999999999997632 222221111  0        11    1


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  613 (670)
                      ++.....+...|....+.+||.+|-     .++||.++
T Consensus       387 FPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  387 FPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             CCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence            2222223445566677899999994     35666654

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=8.1e-30  Score=253.23  Aligned_cols=252  Identities=20%  Similarity=0.294  Sum_probs=187.5

Q ss_pred             chhhHHHhhcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccc-cCceeeeeeeeecc
Q 035655          353 RYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRK  415 (670)
Q Consensus       353 ~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~  415 (670)
                      ++.|+..-|.     +.||+|+|+.|--++.-.                ......+|++++.+.+ |+||++|++||+++
T Consensus        74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            4667766654     679999999998776432                2455679999999996 99999999999999


Q ss_pred             CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC---cEEEEee
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM---NARLGDF  492 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~---~~kL~DF  492 (670)
                      ..+|||||-|.||+|..+|.++  ..+++.+..++.++|+.||.+||.   ++|.|||+||+|||.....   -+||+||
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDf  223 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDF  223 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeecc
Confidence            9999999999999999999765  469999999999999999999999   9999999999999996554   4799999


Q ss_pred             cCceeccCCC------cceeeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHH
Q 035655          493 GLARLFDHGK------ISHTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVL  561 (670)
Q Consensus       493 Gla~~~~~~~------~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~  561 (670)
                      .|........      .+...+.+|+..|||||+..     ...|+.+.|.||||+|+|-|++|..||.+.-..-..|-.
T Consensus       224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr  303 (463)
T KOG0607|consen  224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR  303 (463)
T ss_pred             ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence            9986543221      22234568999999999753     235789999999999999999999999762111112211


Q ss_pred             HHh---hcCCcccccCCCCCCcccHH----HHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          562 EFQ---HLGQVLDVVDPNLGSSYVVA----EMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       562 ~~~---~~~~~~~~~d~~l~~~~~~~----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...   ....+.+.+.... -+++.+    ...+..+++...+..++..|-++.+++++-+
T Consensus       304 Ge~Cr~CQ~~LFesIQEGk-YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw  363 (463)
T KOG0607|consen  304 GEVCRVCQNKLFESIQEGK-YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW  363 (463)
T ss_pred             CCccHHHHHHHHHHHhccC-CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence            000   0011111111110 123332    3455566777777899999999999998544

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=1.9e-29  Score=279.64  Aligned_cols=243  Identities=20%  Similarity=0.272  Sum_probs=171.1

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc--------------------------------hHHHHH--------------HH
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT--------------------------------RMREFA--------------AE  393 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~--------------------------------~~~~f~--------------~E  393 (670)
                      ..++|++.++||+|+||.||+|....                                ..++|.              .|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            36789999999999999999986310                                012232              46


Q ss_pred             HHHHhccccCce-----eeeeeeeec--------cCeeEEEEeccCCCCchhhcccCC----------------------
Q 035655          394 IESLGRLRHKHL-----VNLQGWCKR--------KRDLLLVYDYIPNGSLDSLLFDNE----------------------  438 (670)
Q Consensus       394 i~~L~~l~H~nI-----v~l~g~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~----------------------  438 (670)
                      +.++.+++|.++     ++++++|..        ++..+|||||+++++|.++|+...                      
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777877654     677888753        356899999999999999986421                      


Q ss_pred             ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCc
Q 035655          439 NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP  518 (670)
Q Consensus       439 ~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aP  518 (670)
                      ...++|..+..++.|++.+|.|||+   .+|+||||||+|||++.++.+||+|||+++..............+|+.|+||
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence            1235678899999999999999998   8999999999999999999999999999976544322222223457899999


Q ss_pred             cccccCCC----------------------CccchhHHHHHHHHHHHhCCC-CCCCCcc----------hhHHHHHHHhh
Q 035655          519 ELARTGKA----------------------SCSTDVFAYGVLLLEIATGRR-PIDSDHF----------ILVDWVLEFQH  565 (670)
Q Consensus       519 E~~~~~~~----------------------t~ksDV~S~Gvvl~el~tG~~-pf~~~~~----------~~~~~~~~~~~  565 (670)
                      |.+.....                      ..+.||||+||+++||++|.. |+.....          .+..|.  ...
T Consensus       380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r--~~~  457 (507)
T PLN03224        380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR--MYK  457 (507)
T ss_pred             hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH--hhc
Confidence            98754321                      235799999999999999875 6653110          011111  111


Q ss_pred             cCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCC---CCCCCHHHHHHHhc
Q 035655          566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKA---EARPTMRQVLRYLN  615 (670)
Q Consensus       566 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP---~~RPs~~evl~~L~  615 (670)
                      ...    .+-    ...........+++..++..+|   .+|+|++|+++|-.
T Consensus       458 ~~~----~~~----~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~  502 (507)
T PLN03224        458 GQK----YDF----SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF  502 (507)
T ss_pred             ccC----CCc----ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence            110    010    1111223556777778888655   78999999998754

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=257.91  Aligned_cols=245  Identities=22%  Similarity=0.312  Sum_probs=191.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccch---------------HHHHHHHHHHHhcccc--C----ceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR---------------MREFAAEIESLGRLRH--K----HLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~---------------~~~f~~Ei~~L~~l~H--~----nIv~l~g~~~~~~~~~  419 (670)
                      +++|.+..++|+|.||.|-.+.+...               .+.-.-|+++|+++.+  |    -+|++.+||.-.+..|
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC  167 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC  167 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence            78899999999999999999988653               2234469999999942  2    3788999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC----------------
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA----------------  483 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~----------------  483 (670)
                      +|+|.+ |-|+.++|..+.-.+++...+..|+.|+++++++||+   .+++|-||||+|||+-+                
T Consensus       168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~  243 (415)
T KOG0671|consen  168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI  243 (415)
T ss_pred             EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCcccee
Confidence            999998 6699999998887889999999999999999999999   99999999999999832                


Q ss_pred             ----CCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc-ch-h-
Q 035655          484 ----DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH-FI-L-  556 (670)
Q Consensus       484 ----~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~-~~-~-  556 (670)
                          +..+||+|||-|..-....    ...+.|..|.|||++.+-.++..+||||+||||.|+++|...|+..+ .+ + 
T Consensus       244 r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLa  319 (415)
T KOG0671|consen  244 RPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLA  319 (415)
T ss_pred             ccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHH
Confidence                3358999999998654432    55688999999999999999999999999999999999999997632 11 1 


Q ss_pred             -HHHHHH--------------HhhcCCc-----------ccccCCC--CC--CcccHHHHHHHHHHHHhhccCCCCCCCC
Q 035655          557 -VDWVLE--------------FQHLGQV-----------LDVVDPN--LG--SSYVVAEMELVLQLGLLCSHQKAEARPT  606 (670)
Q Consensus       557 -~~~~~~--------------~~~~~~~-----------~~~~d~~--l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs  606 (670)
                       .+.+..              ....+++           ....++.  +.  ......+...|.+|+..++..||.+|+|
T Consensus       320 MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT  399 (415)
T KOG0671|consen  320 MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT  399 (415)
T ss_pred             HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccccc
Confidence             111100              0000000           0000000  00  0122345678999999999999999999


Q ss_pred             HHHHHHH
Q 035655          607 MRQVLRY  613 (670)
Q Consensus       607 ~~evl~~  613 (670)
                      ++|+++|
T Consensus       400 l~EAL~H  406 (415)
T KOG0671|consen  400 LREALSH  406 (415)
T ss_pred             HHHHhcC
Confidence            9999985

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.96  E-value=2.3e-31  Score=258.57  Aligned_cols=237  Identities=25%  Similarity=0.317  Sum_probs=181.9

Q ss_pred             cccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccC
Q 035655          365 KQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      +....||.|.||+|+|-..+.                 ..+++..|++...+- +.||||+++|.+..++..++.||+|.
T Consensus        67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd  146 (361)
T KOG1006|consen   67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD  146 (361)
T ss_pred             HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence            346789999999999865433                 456788888876655 68999999999999999999999994


Q ss_pred             CCCchhhc---ccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          427 NGSLDSLL---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       427 ~gsL~~~l---~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                       -||+.+.   ..-.+..+++..+-.|......||.||-+  +..|||||+||+|||||..|.+||||||++..+...- 
T Consensus       147 -~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si-  222 (361)
T KOG1006|consen  147 -ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI-  222 (361)
T ss_pred             -hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHH-
Confidence             5776654   23344568998888999999999999998  4889999999999999999999999999997654422 


Q ss_pred             ceeeccccCcCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          504 SHTTNVVGTIGYIAPELARTG--KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       ..+.-+|...|||||.+...  .|+-+|||||||+.|+|+.||+-|+....       ..+.+...+...-.|.+....
T Consensus       223 -AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-------svfeql~~Vv~gdpp~l~~~~  294 (361)
T KOG1006|consen  223 -AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-------SVFEQLCQVVIGDPPILLFDK  294 (361)
T ss_pred             -HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-------HHHHHHHHHHcCCCCeecCcc
Confidence             23445799999999988632  48899999999999999999999987522       222222222222223332211


Q ss_pred             c-HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          582 V-VAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       582 ~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      . ......+...+..|+-+|.++||+..++.++
T Consensus       295 ~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  295 ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            1 2234567888889999999999999998763

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=9.6e-29  Score=248.74  Aligned_cols=209  Identities=30%  Similarity=0.384  Sum_probs=171.1

Q ss_pred             HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcccccc
Q 035655          387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE  466 (670)
Q Consensus       387 ~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~  466 (670)
                      .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++.....  +++..++.++.+++.++.|||+   
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~---  105 (244)
T smart00220       31 RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGR--LSEDEARFYARQILSALEYLHS---  105 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHH---
Confidence            57889999999999999999999999999999999999999999999865433  8999999999999999999999   


Q ss_pred             ceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCC
Q 035655          467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGR  546 (670)
Q Consensus       467 ~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~  546 (670)
                      .+++|+||+|+||++++++.++|+|||.+.......  ......++..|++||......++.++|||+||+++++|++|.
T Consensus       106 ~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~  183 (244)
T smart00220      106 NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGK  183 (244)
T ss_pred             cCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999998765532  233456888999999998888999999999999999999999


Q ss_pred             CCCCC-CcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 035655          547 RPIDS-DHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR  612 (670)
Q Consensus       547 ~pf~~-~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  612 (670)
                      .||.. .....  .. .........    .   ..........+.+++.+|+..+|++||++.++++
T Consensus       184 ~p~~~~~~~~~--~~-~~~~~~~~~----~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      184 PPFPGDDQLLE--LF-KKIGKPKPP----F---PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             CCCCCCCcHHH--HH-HHHhccCCC----C---ccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            99975 22111  11 111111000    0   0000003356888999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=261.12  Aligned_cols=243  Identities=26%  Similarity=0.371  Sum_probs=185.8

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhccccCceeeeeeeee-cc
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLVNLQGWCK-RK  415 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~-~~  415 (670)
                      -.++|-..++||+|||+.|||+++-.                       -.+...+|..+-+.|.||.||++++++. +.
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            34567778899999999999997632                       1233458999999999999999999986 45


Q ss_pred             CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec---CCCcEEEEee
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID---ADMNARLGDF  492 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld---~~~~~kL~DF  492 (670)
                      +.+|-|+|||+|.+|+-||..+  +.+++.+.+.|+.||+.||.||.+ .+++|||-||||.||||-   ..|.+||.||
T Consensus       541 dsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDF  617 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDF  617 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeec
Confidence            7899999999999999999765  468999999999999999999997 468999999999999994   4578999999


Q ss_pred             cCceeccCCCcc------eeeccccCcCCCCccccccC----CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHH
Q 035655          493 GLARLFDHGKIS------HTTNVVGTIGYIAPELARTG----KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE  562 (670)
Q Consensus       493 Gla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~  562 (670)
                      ||+++++.+...      .+....||..|++||++.-+    +++.|.||||.|||+|.++.|++||..+... .+..  
T Consensus       618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ-QdIL--  694 (775)
T KOG1151|consen  618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ-QDIL--  694 (775)
T ss_pred             chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH-HHHH--
Confidence            999999765432      23446899999999987543    5789999999999999999999999863211 1111  


Q ss_pred             HhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 035655          563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR  612 (670)
Q Consensus       563 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  612 (670)
                        ....++....-.+.  .-+....+...++.+||+..-++|....++..
T Consensus       695 --qeNTIlkAtEVqFP--~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  695 --QENTILKATEVQFP--PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             --hhhchhcceeccCC--CCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence              11111111111110  01112244567888999999999987777653

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=6.7e-29  Score=274.80  Aligned_cols=247  Identities=27%  Similarity=0.389  Sum_probs=202.1

Q ss_pred             chhhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc-ccCceeeeeeeeec--
Q 035655          353 RYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL-RHKHLVNLQGWCKR--  414 (670)
Q Consensus       353 ~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~--  414 (670)
                      .++.+-..+.-|++.+.||.|.+|.||+++..+               ...+...|.++|+.+ .|||++.++|++..  
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence            444555667889999999999999999987644               345677888999988 58999999999853  


Q ss_pred             ---cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEe
Q 035655          415 ---KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD  491 (670)
Q Consensus       415 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~D  491 (670)
                         +++++||||||.+||.-|.++.-.+..+.|+.+.-|+..++.||.+||.   ..++|||||=.||||+.++.|||.|
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvD  166 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVD  166 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEee
Confidence               4689999999999999999987667789999999999999999999998   9999999999999999999999999


Q ss_pred             ecCceeccCCCcceeeccccCcCCCCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhc
Q 035655          492 FGLARLFDHGKISHTTNVVGTIGYIAPELARTG-----KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHL  566 (670)
Q Consensus       492 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~  566 (670)
                      ||++....... ....+..||+.|||||++...     .|+..+|+||||++..||.-|..|+.+.+...        ..
T Consensus       167 FGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr--------aL  237 (953)
T KOG0587|consen  167 FGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR--------AL  237 (953)
T ss_pred             eeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh--------hh
Confidence            99998775533 334567899999999998643     46779999999999999999999987533211        11


Q ss_pred             CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       567 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      -.+.....|.|  .-+..-.+++.+.+..|+.+|-.+||++.++++|
T Consensus       238 F~IpRNPPPkL--krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  238 FLIPRNPPPKL--KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             ccCCCCCCccc--cchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            12222233333  2344556788999999999999999999999875

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.5e-29  Score=283.92  Aligned_cols=251  Identities=27%  Similarity=0.319  Sum_probs=198.3

Q ss_pred             CCccchhhHHHhhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeee
Q 035655          349 PHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQ  409 (670)
Q Consensus       349 ~~~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~  409 (670)
                      |..-...+++...++|.+.++||+|+||.|...+.+.                   ....|..|-.+|..-+.+=|++|+
T Consensus        62 p~v~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~Lh  141 (1317)
T KOG0612|consen   62 PIVKKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLH  141 (1317)
T ss_pred             HHHHHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHH
Confidence            3344556777778899999999999999999998754                   234577888888888889999999


Q ss_pred             eeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEE
Q 035655          410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL  489 (670)
Q Consensus       410 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL  489 (670)
                      -.|.+.+++|+|||||+||+|-..+.+..  .+++..++-++..|..||.-||+   .|+|||||||+|||||..|.+||
T Consensus       142 yAFQD~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikL  216 (1317)
T KOG0612|consen  142 YAFQDERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKL  216 (1317)
T ss_pred             HHhcCccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEee
Confidence            99999999999999999999999997665  68999999999999999999999   99999999999999999999999


Q ss_pred             EeecCceeccCCCcceeeccccCcCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHh
Q 035655          490 GDFGLARLFDHGKISHTTNVVGTIGYIAPELART-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ  564 (670)
Q Consensus       490 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~  564 (670)
                      +|||-+-.+..+..-.....+|||.|++||+++.     +.|.+.+|-||+||++|||++|..||..+.  +++-.....
T Consensus       217 ADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads--lveTY~KIm  294 (1317)
T KOG0612|consen  217 ADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS--LVETYGKIM  294 (1317)
T ss_pred             ccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH--HHHHHHHHh
Confidence            9999998887666566667799999999998862     578999999999999999999999997543  222111111


Q ss_pred             hcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCC---HHHHHHHh
Q 035655          565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVLRYL  614 (670)
Q Consensus       565 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~L  614 (670)
                      .....+...+       ..+..+...+|++.-+. +|..|-.   ++++..|.
T Consensus       295 ~hk~~l~FP~-------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp  339 (1317)
T KOG0612|consen  295 NHKESLSFPD-------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP  339 (1317)
T ss_pred             chhhhcCCCc-------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence            1111111111       11233445555555443 5777777   89888875

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=7.2e-29  Score=228.25  Aligned_cols=183  Identities=30%  Similarity=0.408  Sum_probs=156.0

Q ss_pred             CccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +|...++||+|.||+|+||+....                  .....+||.+|+.|+|+|||++++..+.+..+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            456678999999999999986542                  24567999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      |. .+|..|...- +..++.+....++.|+++||.++|+   +.+.|||+||.|.|++.+|+.|++|||+++.+.-... 
T Consensus        83 cd-qdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipvr-  156 (292)
T KOG0662|consen   83 CD-QDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR-  156 (292)
T ss_pred             hh-HHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCceE-
Confidence            94 5787776543 3468999999999999999999999   8999999999999999999999999999997765321 


Q ss_pred             eeeccccCcCCCCccccccCC-CCccchhHHHHHHHHHHHh-CCCCCCC
Q 035655          505 HTTNVVGTIGYIAPELARTGK-ASCSTDVFAYGVLLLEIAT-GRRPIDS  551 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~el~t-G~~pf~~  551 (670)
                      .....+-|..|.+|.++.+.+ |++..|+||-||++.|+.. |+..|.+
T Consensus       157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg  205 (292)
T KOG0662|consen  157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG  205 (292)
T ss_pred             eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence            223346789999999998765 7899999999999999988 6655655

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.96  E-value=1e-29  Score=265.94  Aligned_cols=232  Identities=25%  Similarity=0.361  Sum_probs=188.3

Q ss_pred             cceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          367 SEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      .+.||+|.||+||-|+.++                  +..++.+|+.+|++++||.||.+--.|+..+..++|||-+.| 
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence            5789999999999997654                  346778999999999999999999999999999999999955 


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC---CcEEEEeecCceeccCCCcce
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---MNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~---~~~kL~DFGla~~~~~~~~~~  505 (670)
                      +..+.|...++..|++..-.-++.||+.||.|||.   ++|+|+||||+||||.+.   -++||||||+|+++....  -
T Consensus       648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks--F  722 (888)
T KOG4236|consen  648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS--F  722 (888)
T ss_pred             hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh--h
Confidence            55444445555679998888999999999999999   999999999999999643   479999999999987654  3


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ...++||+.|+|||++++..|...-|+||.|+|+|--++|.-||..++. +.+-+    +  .-.-+..|    ....+.
T Consensus       723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-IndQI----Q--NAaFMyPp----~PW~ei  791 (888)
T KOG4236|consen  723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-INDQI----Q--NAAFMYPP----NPWSEI  791 (888)
T ss_pred             hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-hhHHh----h--ccccccCC----Cchhhc
Confidence            3457999999999999999999999999999999999999999976432 11111    1  11112222    223344


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ....++++...+|..-++|-+..+.+.|-+
T Consensus       792 s~~AidlIn~LLqVkm~kRysvdk~lsh~W  821 (888)
T KOG4236|consen  792 SPEAIDLINNLLQVKMRKRYSVDKSLSHPW  821 (888)
T ss_pred             CHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence            556778888889999999999999888754

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.5e-29  Score=243.98  Aligned_cols=247  Identities=29%  Similarity=0.412  Sum_probs=184.6

Q ss_pred             CccccceEeeeCceeEEEeeccchHHH------------------HHHHHHHHhccccCceeeeeeeeecc--------C
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTRMRE------------------FAAEIESLGRLRHKHLVNLQGWCKRK--------R  416 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~~~~------------------f~~Ei~~L~~l~H~nIv~l~g~~~~~--------~  416 (670)
                      .|....+||+|.||.||+++...+.+.                  -.+|+++|..|+|+|++.++..|...        .
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence            345567899999999999987663322                  23899999999999999999999643        3


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      .+++||.+|+. +|.-.|... ...++..++.++++++..||.|+|.   ..|+|||+||.|+|++.++.+||+|||+++
T Consensus        98 t~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGlar  172 (376)
T KOG0669|consen   98 TFYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLAR  172 (376)
T ss_pred             eeeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeecccccc
Confidence            48999999975 777777543 3468999999999999999999999   999999999999999999999999999998


Q ss_pred             eccCCC---cceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCccc
Q 035655          497 LFDHGK---ISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLD  571 (670)
Q Consensus       497 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~  571 (670)
                      .+....   ....++.+-|..|.+||.+.+. .++++.|||.-|||+.||.++.+.+++.... ....+..+  .+....
T Consensus       173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~L--cGs~tk  250 (376)
T KOG0669|consen  173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQL--CGSITK  250 (376)
T ss_pred             ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHH--hccCCc
Confidence            765433   2223456779999999988764 6899999999999999999999888763211 11111111  111111


Q ss_pred             ccCCC--------------CC-Ccc--cHHHH------HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          572 VVDPN--------------LG-SSY--VVAEM------ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       572 ~~d~~--------------l~-~~~--~~~~~------~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      -+-|.              +. +.+  ....+      ...++|+..++..||.+|+...+++.|-.-
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F  318 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFF  318 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhh
Confidence            11111              10 000  01111      256788889999999999999999987543

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.9e-28  Score=250.25  Aligned_cols=224  Identities=26%  Similarity=0.348  Sum_probs=179.8

Q ss_pred             cCccccceEeeeCceeEEEeeccchHHHHH-------------------HHHHHHhcc-ccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFA-------------------AEIESLGRL-RHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~~~~f~-------------------~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .+|....+||+|+||+|.++.-+...+-++                   .|-++|... +-|.+++++.+++.-+.+|+|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            468889999999999999987655332221                   355556555 457899999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+.+|+|--++++-+  .+.+..+.-++..||-||-+||+   ++|+.||||..|||||.+|.+||+|||+++.--.+
T Consensus       429 MEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~  503 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD  503 (683)
T ss_pred             EEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccccccC
Confidence            99999999999997654  47888889999999999999999   99999999999999999999999999999743322


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                       ...+.+.+||+.|+|||++...+|....|-||||++||||+.|+.||++++.. +-..+            .+..  -.
T Consensus       504 -~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI------------~ehn--vs  568 (683)
T KOG0696|consen  504 -GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI------------MEHN--VS  568 (683)
T ss_pred             -CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH------------HHcc--Cc
Confidence             23456689999999999999999999999999999999999999999985533 22111            1111  12


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARP  605 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RP  605 (670)
                      |+.....+...++..-+.+.|.+|-
T Consensus       569 yPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  569 YPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             CcccccHHHHHHHHHHhhcCCcccc
Confidence            4444455666777778889999883

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=1e-28  Score=272.09  Aligned_cols=234  Identities=26%  Similarity=0.375  Sum_probs=178.0

Q ss_pred             ccccceEeeeCcee-EEEeeccchH-----------HHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCCCCc
Q 035655          364 FKQSEVIGTGGFGE-VYKGVLPTRM-----------REFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       364 f~~~~~lG~G~fg~-Vykg~~~~~~-----------~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      |...+.+|.|+-|+ ||+|...++.           .-..+||..|+.- +|||||++++.-.+...+||..|.| ..+|
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~sL  589 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACSL  589 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhhH
Confidence            55567889999875 7999886632           1223799999887 5999999999888888999999999 5799


Q ss_pred             hhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC---C--CcEEEEeecCceeccCCCc
Q 035655          431 DSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---D--MNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       431 ~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~---~--~~~kL~DFGla~~~~~~~~  503 (670)
                      ++++...  ......-...+.++.|+++||++||+   .+||||||||.||||+.   +  .+++|+|||+++....+..
T Consensus       590 ~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s  666 (903)
T KOG1027|consen  590 QDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS  666 (903)
T ss_pred             HHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence            9999774  11112224557889999999999999   99999999999999976   2  5789999999998876653


Q ss_pred             ce--eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          504 SH--TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       504 ~~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      ..  .....||-||+|||.+...+.+...||||+|||+|++++ |.+||...-....+....   ... +..+.+     
T Consensus       667 S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~---~~~-L~~L~~-----  737 (903)
T KOG1027|consen  667 SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTG---NYT-LVHLEP-----  737 (903)
T ss_pred             hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcC---ccc-eeeecc-----
Confidence            32  345689999999999999988999999999999999999 599998622111110000   000 111111     


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      . .++  +..+|+.+|++++|..||++.+|+.|
T Consensus       738 ~-~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  738 L-PDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             C-chH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence            0 111  56788899999999999999999975

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=6.2e-27  Score=249.69  Aligned_cols=195  Identities=31%  Similarity=0.442  Sum_probs=164.9

Q ss_pred             cchhhHHHhh---cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeee
Q 035655          352 FRYSDLYTAT---KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQ  409 (670)
Q Consensus       352 ~~~~~l~~~t---~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~  409 (670)
                      -.|-.|+.+.   .-|..++.||-|+||+|.+++--+                   .....++|-.||..-..+=||+|+
T Consensus       616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy  695 (1034)
T KOG0608|consen  616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY  695 (1034)
T ss_pred             hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence            4455555554   348889999999999999986543                   223456899999999999999999


Q ss_pred             eeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEE
Q 035655          410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL  489 (670)
Q Consensus       410 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL  489 (670)
                      -.|.+++.+|+||||++||++-.+|.+.+  .+.++..+-++..+.+|+++.|.   .|+|||||||+|||||.+|.+||
T Consensus       696 ySFQDkdnLYFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKL  770 (1034)
T KOG0608|consen  696 YSFQDKDNLYFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKL  770 (1034)
T ss_pred             EEeccCCceEEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceee
Confidence            99999999999999999999999996653  58888999999999999999998   99999999999999999999999


Q ss_pred             EeecCceecc---------CCCc--------------------------------ceeeccccCcCCCCccccccCCCCc
Q 035655          490 GDFGLARLFD---------HGKI--------------------------------SHTTNVVGTIGYIAPELARTGKASC  528 (670)
Q Consensus       490 ~DFGla~~~~---------~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~  528 (670)
                      .||||+.-+.         .+..                                ......+||+.|+|||++....++.
T Consensus       771 TDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q  850 (1034)
T KOG0608|consen  771 TDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQ  850 (1034)
T ss_pred             eeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccc
Confidence            9999985331         1100                                0011257999999999999999999


Q ss_pred             cchhHHHHHHHHHHHhCCCCCCC
Q 035655          529 STDVFAYGVLLLEIATGRRPIDS  551 (670)
Q Consensus       529 ksDV~S~Gvvl~el~tG~~pf~~  551 (670)
                      .+|-||.||||+||+.|+.||..
T Consensus       851 ~cdwws~gvil~em~~g~~pf~~  873 (1034)
T KOG0608|consen  851 LCDWWSVGVILYEMLVGQPPFLA  873 (1034)
T ss_pred             cchhhHhhHHHHHHhhCCCCccC
Confidence            99999999999999999999975

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=8.4e-28  Score=251.21  Aligned_cols=236  Identities=21%  Similarity=0.293  Sum_probs=194.4

Q ss_pred             cCccccceEeeeCceeEEEeeccch-------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .+++.+..||-||||.|-+......                   .+....|-.+|...+.|.||+|+--+.+....|++|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            4566678899999999988765442                   234557889999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      |-|-||.|...|++++  .++.....-++..+.+|+.|||+   ++||.|||||+|++||.+|-+||.|||+|+....+ 
T Consensus       500 EaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g-  573 (732)
T KOG0614|consen  500 EACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG-  573 (732)
T ss_pred             HhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccC-
Confidence            9999999999997654  58888888999999999999999   99999999999999999999999999999987665 


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       ..+-+.+||+.|.|||++.+...+...|.||||++++||++|+.||...+.- ..+-.-+       .-+|.   .+++
T Consensus       574 -~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm-ktYn~IL-------kGid~---i~~P  641 (732)
T KOG0614|consen  574 -RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM-KTYNLIL-------KGIDK---IEFP  641 (732)
T ss_pred             -CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHH-------hhhhh---hhcc
Confidence             3556789999999999999999999999999999999999999999874421 1111111       11111   2344


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPT-----MRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~  615 (670)
                      ....+...+|+...+..+|.+|--     +.+|-+|-+
T Consensus       642 r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W  679 (732)
T KOG0614|consen  642 RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW  679 (732)
T ss_pred             cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence            445566778888888999999865     788888765

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.94  E-value=4.1e-28  Score=228.19  Aligned_cols=186  Identities=25%  Similarity=0.369  Sum_probs=153.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .+.......||+|+||.|-+-++..                 ..++...|+.+..+. ..|.+|.++|...+....++.|
T Consensus        45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM  124 (282)
T KOG0984|consen   45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM  124 (282)
T ss_pred             hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence            3445556789999999886554322                 346677888877665 6899999999999999999999


Q ss_pred             eccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          423 DYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       423 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |.| ..||+.+-.+  ..+..+++..+-+|+..|.+||.|||+  +..++|||+||+|||++.+|++|+||||++..+.+
T Consensus       125 E~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  125 ELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             HHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence            999 4588877644  234578999999999999999999999  58899999999999999999999999999987655


Q ss_pred             CCcceeeccccCcCCCCcccccc----CCCCccchhHHHHHHHHHHHhCCCCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELART----GKASCSTDVFAYGVLLLEIATGRRPIDS  551 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~----~~~t~ksDV~S~Gvvl~el~tG~~pf~~  551 (670)
                      .-  ..+...|...|||||.+..    ..|+-|+||||||+.+.||.+++.||+.
T Consensus       202 Si--Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  202 SI--AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             hh--HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence            32  2233578899999998753    3688999999999999999999999985

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.94  E-value=5.2e-26  Score=222.72  Aligned_cols=196  Identities=36%  Similarity=0.576  Sum_probs=172.0

Q ss_pred             EeeeCceeEEEeeccc-------------h----HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCchh
Q 035655          370 IGTGGFGEVYKGVLPT-------------R----MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDS  432 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~-------------~----~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~  432 (670)
                      ||+|.+|.||++....             .    .+.+.+|++.+++++|++++++++++......++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6889999999998752             1    2568899999999999999999999999999999999999999999


Q ss_pred             hcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-CCcEEEEeecCceeccCCCcceeecccc
Q 035655          433 LLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFDHGKISHTTNVVG  511 (670)
Q Consensus       433 ~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-~~~~kL~DFGla~~~~~~~~~~~~~~~g  511 (670)
                      ++.... ..+++..+..++.+++++|.+||+   .+++|+||+|.||+++. ++.++|+|||.+........ ......+
T Consensus        81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~  155 (215)
T cd00180          81 LLKENE-GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVG  155 (215)
T ss_pred             HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccC
Confidence            986543 368999999999999999999999   89999999999999999 89999999999987655321 1233467


Q ss_pred             CcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHH
Q 035655          512 TIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL  590 (670)
Q Consensus       512 t~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~  590 (670)
                      ...|++||..... ..+.+.|+|++|+++++|                                            ..+.
T Consensus       156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------~~~~  191 (215)
T cd00180         156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------PELK  191 (215)
T ss_pred             CCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------HHHH
Confidence            8899999998877 788999999999999999                                            4577


Q ss_pred             HHHHhhccCCCCCCCCHHHHHHHh
Q 035655          591 QLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       591 ~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      +++..|++.+|.+||++.++++++
T Consensus       192 ~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         192 DLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHhhCCcccCcCHHHHhhCC
Confidence            899999999999999999998754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.94  E-value=1.8e-27  Score=226.87  Aligned_cols=244  Identities=23%  Similarity=0.326  Sum_probs=184.5

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-------------hHHHHHHHHHHHhccc-cCceeeeeeeeecc--CeeEEEEe
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRK--RDLLLVYD  423 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~--~~~~lV~E  423 (670)
                      ..++|++.+++|+|.|+.|+.|+.-.             ..+...+|+++|+.|+ ||||++|++...+.  ....||+|
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE  115 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE  115 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence            35689999999999999999987422             5678899999999998 99999999998765  56799999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceeccCCC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFDHGK  502 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~~~  502 (670)
                      |..+.+.....     ..|+...+.-.+.+++.||.|+|+   .||.|||+||.|+++|... ..+|+|+|+|..+..+.
T Consensus       116 ~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~  187 (338)
T KOG0668|consen  116 YVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK  187 (338)
T ss_pred             hhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence            99998877664     357778888999999999999999   9999999999999999654 69999999999887654


Q ss_pred             cceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-----HHHHHHhhcC----Ccccc
Q 035655          503 ISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-----DWVLEFQHLG----QVLDV  572 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-----~~~~~~~~~~----~~~~~  572 (670)
                      .  -...+.+..|.-||++-. ..|+..-|+|||||++.+|+..+.||-..+.+..     ..+.......    +..-.
T Consensus       188 e--YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~  265 (338)
T KOG0668|consen  188 E--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID  265 (338)
T ss_pred             e--eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence            2  223356778889998764 4678999999999999999999999965332211     1111111111    11111


Q ss_pred             cCCCCCC---c--------ccH----H-HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          573 VDPNLGS---S--------YVV----A-EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       573 ~d~~l~~---~--------~~~----~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +||++..   .        +..    . ...+.++++...+..|-.+|||++|.++|
T Consensus       266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence            3333211   0        000    0 12456777888889999999999999875

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=7.2e-28  Score=234.58  Aligned_cols=247  Identities=22%  Similarity=0.347  Sum_probs=185.6

Q ss_pred             ccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccccCceeeeeeeeecc-----CeeEE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLRHKHLVNLQGWCKRK-----RDLLL  420 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~~~l  420 (670)
                      .+..+.||-|+||.||...++.+                  .+.+.+|+++|.-++|.|++..++...-.     .++|+
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            44568899999999998877652                  35567899999999999999998876543     35789


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      +.|.|. .+|..+|-..  ..++-..+.-++.||++||.|||+   .+|.||||||.|.|+++|...||+|||+++..+.
T Consensus       135 ~TELmQ-SDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~  208 (449)
T KOG0664|consen  135 LTELMQ-SDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ  208 (449)
T ss_pred             HHHHHH-hhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccch
Confidence            999994 4787777543  468888888999999999999999   9999999999999999999999999999999888


Q ss_pred             CCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHh-----------hcC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQ-----------HLG  567 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~-----------~~~  567 (670)
                      +....++..+-|..|.|||++.+. .|+...||||.||++.||+-.+-.|+.... ...+.+.++.           .++
T Consensus       209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG  288 (449)
T KOG0664|consen  209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG  288 (449)
T ss_pred             hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence            777778888889999999998875 589999999999999999998888865221 1111111111           111


Q ss_pred             CcccccC-----CCCCCcc----cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          568 QVLDVVD-----PNLGSSY----VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       568 ~~~~~~d-----~~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ....++.     |.+.--|    +..--.+...+...++..||++|.+..+.+.++..
T Consensus       289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~  346 (449)
T KOG0664|consen  289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL  346 (449)
T ss_pred             hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence            1111111     1111000    00111233455667889999999999999998753

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=3.3e-26  Score=228.38  Aligned_cols=229  Identities=25%  Similarity=0.323  Sum_probs=177.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccchH-----HHHH--------------HHHHHHhcc-ccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTRM-----REFA--------------AEIESLGRL-RHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~~-----~~f~--------------~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|...++||+|.|.+|..+++.+..     +-.+              .|-.+..+- +||.+|.|+.+|.....+++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            467899999999999999998876531     1122              233333333 69999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |.||.++|+|--++++.  ..|+++..+-+...|+-||.|||+   .+|+.||||..|+|||.+|.+||.|+|+++.--.
T Consensus       329 vieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~  403 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG  403 (593)
T ss_pred             EEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence            99999999998888654  359999999999999999999999   9999999999999999999999999999974322


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC-----CcchhHHHHHHHhhcCCcccccCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS-----DHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~-----~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                       ....+.+.+||+.|+|||++++..|....|-|++|++++||+.|+.||+-     .+.+..++..+.....++ .    
T Consensus       404 -~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi-r----  477 (593)
T KOG0695|consen  404 -PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI-R----  477 (593)
T ss_pred             -CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc-c----
Confidence             23445678999999999999999999999999999999999999999974     222333333332222111 0    


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCC
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARP  605 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  605 (670)
                           .+.....+...+...-+++||.+|.
T Consensus       478 -----iprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  478 -----IPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             -----ccceeehhhHHHHHHhhcCCcHHhc
Confidence                 1111123344556677889998873

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.2e-25  Score=234.95  Aligned_cols=273  Identities=23%  Similarity=0.281  Sum_probs=201.2

Q ss_pred             hhhhhccccccCCCccchhhHHHhhcCccccceEeeeCceeEEEeeccch---------------HHHHHHHHHHHhccc
Q 035655          337 QFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTR---------------MREFAAEIESLGRLR  401 (670)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~~---------------~~~f~~Ei~~L~~l~  401 (670)
                      ..|..+++..++.|.....|.+. ..+|.+.++||-|.|++||++.+...               .+.-..||++|++++
T Consensus        54 eqE~~~dY~kGGYHpV~IGD~F~-~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~  132 (590)
T KOG1290|consen   54 EQEDPEDYRKGGYHPVRIGDVFN-GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVR  132 (590)
T ss_pred             cccChhhhhcCCCceeecccccc-CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHH
Confidence            34555677777788888888764 46899999999999999999987552               234568999999984


Q ss_pred             -----c---Cceeeeeeeeecc----CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceE
Q 035655          402 -----H---KHLVNLQGWCKRK----RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV  469 (670)
Q Consensus       402 -----H---~nIv~l~g~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i  469 (670)
                           |   .+||+|+++|...    ...|+|+|++ |.+|..+|....-+.++...+.+|++||+.||.|||++  .+|
T Consensus       133 ~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgI  209 (590)
T KOG1290|consen  133 EGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGI  209 (590)
T ss_pred             hcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCc
Confidence                 2   5799999999754    4789999999 77999999877666799999999999999999999995  689


Q ss_pred             EecccCCCcEEecCC-----------C-----------------------------------------------------
Q 035655          470 IHRDVKSGNVLIDAD-----------M-----------------------------------------------------  485 (670)
Q Consensus       470 vHrDIkp~NILld~~-----------~-----------------------------------------------------  485 (670)
                      ||.||||+||||..+           +                                                     
T Consensus       210 IHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~  289 (590)
T KOG1290|consen  210 IHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLA  289 (590)
T ss_pred             cccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhc
Confidence            999999999997321           0                                                     


Q ss_pred             --------------------------------------------------------------------------------
Q 035655          486 --------------------------------------------------------------------------------  485 (670)
Q Consensus       486 --------------------------------------------------------------------------------  485 (670)
                                                                                                      
T Consensus       290 ~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~  369 (590)
T KOG1290|consen  290 GLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPS  369 (590)
T ss_pred             ccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcC
Confidence                                                                                            


Q ss_pred             ----------------------cEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHH
Q 035655          486 ----------------------NARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIA  543 (670)
Q Consensus       486 ----------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~  543 (670)
                                            +|||+|||-|.-..+    ..+.-..|.-|.|||++.+..|.+.+||||++|+++||+
T Consensus       370 s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~k----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELa  445 (590)
T KOG1290|consen  370 SPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVHK----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELA  445 (590)
T ss_pred             CccccccccccCCCCCCCccceeEEEeeccchhhhhh----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhh
Confidence                                  022222222221111    111224678899999999999999999999999999999


Q ss_pred             hCCCCCCCC-------cchhHHHHHH-------------------HhhcCCcccccCCCCC---------CcccHHHHHH
Q 035655          544 TGRRPIDSD-------HFILVDWVLE-------------------FQHLGQVLDVVDPNLG---------SSYVVAEMEL  588 (670)
Q Consensus       544 tG~~pf~~~-------~~~~~~~~~~-------------------~~~~~~~~~~~d~~l~---------~~~~~~~~~~  588 (670)
                      ||...|+..       +...++.+.+                   +...+.+..+-.-+..         -+++.+++..
T Consensus       446 TGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~  525 (590)
T KOG1290|consen  446 TGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQ  525 (590)
T ss_pred             cCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHH
Confidence            999998751       1111111111                   1122222222111111         2456778899


Q ss_pred             HHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          589 VLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       589 l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      +.+++.-||+.+|++|||+.++++|-+-.
T Consensus       526 fsdFL~PmLef~PeKR~tA~~cl~hPwLn  554 (590)
T KOG1290|consen  526 FSDFLSPMLEFDPEKRPTAAQCLKHPWLN  554 (590)
T ss_pred             HHHHHHHHHhcCccccccHHHHhcCcccc
Confidence            99999999999999999999999986643

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=6.4e-27  Score=277.46  Aligned_cols=200  Identities=17%  Similarity=0.218  Sum_probs=144.7

Q ss_pred             Hhcccc-Cceeeeeeee-------eccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce
Q 035655          397 LGRLRH-KHLVNLQGWC-------KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV  468 (670)
Q Consensus       397 L~~l~H-~nIv~l~g~~-------~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~  468 (670)
                      .++++| +||++++++|       .+.+.++.++||+ +++|.++|.... ..+++.+++.++.||++||.|||+   ++
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~g  100 (793)
T PLN00181         26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHS---QG  100 (793)
T ss_pred             cchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence            456677 7899999988       2334678888987 669999996543 469999999999999999999998   99


Q ss_pred             EEecccCCCcEEecCC-------------------CcEEEEeecCceeccCCCc---------------ceeeccccCcC
Q 035655          469 VIHRDVKSGNVLIDAD-------------------MNARLGDFGLARLFDHGKI---------------SHTTNVVGTIG  514 (670)
Q Consensus       469 ivHrDIkp~NILld~~-------------------~~~kL~DFGla~~~~~~~~---------------~~~~~~~gt~~  514 (670)
                      |+||||||+||||+..                   +.+|++|||+++.......               .......||+.
T Consensus       101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  180 (793)
T PLN00181        101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW  180 (793)
T ss_pred             eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence            9999999999999654                   4456666666653211000               00112358889


Q ss_pred             CCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHH
Q 035655          515 YIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL  594 (670)
Q Consensus       515 y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~  594 (670)
                      |||||++.+..++.++|||||||+||||++|..|+..........    ..     ...++...     ........++.
T Consensus       181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~----~~-----~~~~~~~~-----~~~~~~~~~~~  246 (793)
T PLN00181        181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSL----RH-----RVLPPQIL-----LNWPKEASFCL  246 (793)
T ss_pred             eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHH----HH-----hhcChhhh-----hcCHHHHHHHH
Confidence            999999999999999999999999999999988875322111111    00     01111111     11233467888


Q ss_pred             hhccCCCCCCCCHHHHHHHhc
Q 035655          595 LCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       595 ~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +||+++|.+||++.|++++-.
T Consensus       247 ~~L~~~P~~Rps~~eil~h~~  267 (793)
T PLN00181        247 WLLHPEPSCRPSMSELLQSEF  267 (793)
T ss_pred             HhCCCChhhCcChHHHhhchh
Confidence            999999999999999998654

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.93  E-value=1.2e-26  Score=246.07  Aligned_cols=181  Identities=26%  Similarity=0.378  Sum_probs=158.6

Q ss_pred             cCccccceEeeeCceeEEEeeccchH------------------------HHHHHHHHHHhccc---cCceeeeeeeeec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTRM------------------------REFAAEIESLGRLR---HKHLVNLQGWCKR  414 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~~------------------------~~f~~Ei~~L~~l~---H~nIv~l~g~~~~  414 (670)
                      .+|...+.+|+|+||.|+.|+++...                        -....||++|.+|+   |+||++++++|++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            34788899999999999999886621                        12337999999998   9999999999999


Q ss_pred             cCeeEEEEeccC-CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          415 KRDLLLVYDYIP-NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       415 ~~~~~lV~E~~~-~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      ++.+||++|-.. +-+|.++|..+  ..+++.+..-|++||+.|+++||+   ++|||||||-+|+.++.+|-+||+|||
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfg  715 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFG  715 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeecc
Confidence            999999999764 56899999654  459999999999999999999999   999999999999999999999999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCC
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPID  550 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t-~ksDV~S~Gvvl~el~tG~~pf~  550 (670)
                      .+.....+.   -...+||.+|.|||++.+.+|- ..-|||++|++||-++....||.
T Consensus       716 saa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  716 SAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             chhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            997765543   3456899999999999998885 55899999999999999988875

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.93  E-value=3.7e-25  Score=220.66  Aligned_cols=184  Identities=32%  Similarity=0.497  Sum_probs=160.7

Q ss_pred             ccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      |...+.||+|++|.||++....                 ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            4567899999999999997754                 34578889999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++..... .+++..+..++.+++.+|.+||+   .+++|+||+|.||+++.++.++|+|||++...........
T Consensus        81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~  156 (225)
T smart00221       81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL  156 (225)
T ss_pred             CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence            9999999865432 28999999999999999999998   8999999999999999999999999999987755431122


Q ss_pred             eccccCcCCCCcccc-ccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 035655          507 TNVVGTIGYIAPELA-RTGKASCSTDVFAYGVLLLEIATGRRPIDS  551 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~-~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~  551 (670)
                      ....++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus       157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            345678899999998 666788899999999999999999999964

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.92  E-value=1.3e-24  Score=209.81  Aligned_cols=166  Identities=19%  Similarity=0.159  Sum_probs=125.7

Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++.++. ..++|.+++.++.|++.||.|||+   .+      ||+|||++.++.+|+  ||+++......     
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-----   63 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-----   63 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeecccc-----
Confidence            78999997543 469999999999999999999998   44      999999999999999  99998765422     


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                       ..||+.|||||++.+..++.++|||||||++|||++|+.||...... ...........  . ..++.-. ........
T Consensus        64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~-~~~~~~~~~~~--~-~~~~~~~-~~~~~~~~  137 (176)
T smart00750       64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL-SAILEILLNGM--P-ADDPRDR-SNLESVSA  137 (176)
T ss_pred             -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh-cHHHHHHHHHh--c-cCCcccc-ccHHHHHh
Confidence             26899999999999999999999999999999999999999753221 11111111000  0 0011100 11122222


Q ss_pred             --HHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          588 --LVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       588 --~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                        .+.+++..||+.+|.+||++.|+++++..
T Consensus       138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      138 ARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             hhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence              58899999999999999999999998863

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=3.1e-25  Score=216.54  Aligned_cols=236  Identities=21%  Similarity=0.309  Sum_probs=174.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc-ccCceeeeeee-eeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL-RHKHLVNLQGW-CKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~-~~~~~~~~lV~E  423 (670)
                      .+.|.+.+.||+|.||.+-++.++.               ..++|.+|...=-.| .|.||+.-++. |+..+.+.+++|
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            3567888999999999999998765               457888888765555 48999987664 677788999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe-cC-CCcEEEEeecCceeccCC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI-DA-DMNARLGDFGLARLFDHG  501 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl-d~-~~~~kL~DFGla~~~~~~  501 (670)
                      |+|.|+|.+-+...   .+.+....+++.|+++||.|+|+   +.+||||||.+|||+ +. ..++||||||+.+..+. 
T Consensus       103 ~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~-  175 (378)
T KOG1345|consen  103 FAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT-  175 (378)
T ss_pred             cCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCc-
Confidence            99999999988553   47788888999999999999999   999999999999999 33 34899999999874332 


Q ss_pred             CcceeeccccCcCCCCcccccc---C--CCCccchhHHHHHHHHHHHhCCCCCCCC-cchhHHHHHHHhhcCCcccccCC
Q 035655          502 KISHTTNVVGTIGYIAPELART---G--KASCSTDVFAYGVLLLEIATGRRPIDSD-HFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~---~--~~t~ksDV~S~Gvvl~el~tG~~pf~~~-~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                         ......-+..|.+||....   +  ...+.+|||+||++++.++||+.||+.. .....-|.+..+..+...  .-|
T Consensus       176 ---tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~--~~P  250 (378)
T KOG1345|consen  176 ---TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP--ALP  250 (378)
T ss_pred             ---eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc--cCc
Confidence               1222344668999997643   3  2467899999999999999999999852 122233444444443332  122


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR  612 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  612 (670)
                      +.-..+    .+.++++-..-+.++|++|-...++.+
T Consensus       251 ~~F~~f----s~~a~r~Fkk~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  251 KKFNPF----SEKALRLFKKSLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             hhhccc----CHHHHHHHHHhcCCcccccchhHHHHH
Confidence            222223    345566677788999999954444443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.91  E-value=1.9e-25  Score=240.69  Aligned_cols=240  Identities=26%  Similarity=0.383  Sum_probs=188.6

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch----------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~----------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ..++|+...++|.|.||.|||+++...                .+-..+|+-+++..+||||+.++|-+-..+.++++||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            345788889999999999999987552                2334589999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      ||.+|+|++.-+-  ..++++.++...++..++||+|||+   .+=+|||||=.|||+++.+.+|++|||.+..+... .
T Consensus        93 ycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitat-i  166 (829)
T KOG0576|consen   93 YCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT-I  166 (829)
T ss_pred             ecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhh-h
Confidence            9999999998754  4579999999999999999999999   88899999999999999999999999998765432 2


Q ss_pred             ceeeccccCcCCCCcccc---ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          504 SHTTNVVGTIGYIAPELA---RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~---~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .+.....||+.|||||+.   +.+.|..++|||+.|+...|+---+.|..+.+.. .  +..++.....   -.|.+.. 
T Consensus       167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm-r--~l~LmTkS~~---qpp~lkD-  239 (829)
T KOG0576|consen  167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM-R--ALFLMTKSGF---QPPTLKD-  239 (829)
T ss_pred             hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH-H--HHHHhhccCC---CCCcccC-
Confidence            345667999999999975   4567899999999999999998877775432211 1  1111111110   1122211 


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                       ...-.+.+.+++..|+.++|++||+.+.+++|
T Consensus       240 -k~kws~~fh~fvK~altknpKkRptaeklL~h  271 (829)
T KOG0576|consen  240 -KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH  271 (829)
T ss_pred             -CccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence             11223567889999999999999999887653

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.91  E-value=2.5e-25  Score=222.19  Aligned_cols=242  Identities=22%  Similarity=0.274  Sum_probs=180.2

Q ss_pred             hcCccccceEeeeCceeEEEeecc---------c---------hHHHHHHHHHHHhccccCceeeeeeeeecc------C
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP---------T---------RMREFAAEIESLGRLRHKHLVNLQGWCKRK------R  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~---------~---------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~  416 (670)
                      ..+|...+.+|.|.- .|.-+.+.         +         ..+.-.+|...+..++|+||++++.++.-.      .
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            445555666776666 44433321         1         224455899999999999999999998533      4


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      +.|+|||+| ..+|...+.    ..++.+.+..|..|+++|+.|||+   .+|+||||||+||++..+..+||.|||+|+
T Consensus        95 e~y~v~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar  166 (369)
T KOG0665|consen   95 EVYLVMELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLAR  166 (369)
T ss_pred             hHHHHHHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhc
Confidence            689999999 568888875    347888999999999999999999   999999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc-----
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD-----  571 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~-----  571 (670)
                      ..+..  -..+..+.|..|.|||++.+..+.+..||||.||++.||++|+--|.+. ..+..|.+.....+..-.     
T Consensus       167 ~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~-d~idQ~~ki~~~lgtpd~~F~~q  243 (369)
T KOG0665|consen  167 TEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK-DHIDQWNKIIEQLGTPDPSFMKQ  243 (369)
T ss_pred             ccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc-hHHHHHHHHHHHhcCCCHHHHHH
Confidence            65543  3456678899999999999888999999999999999999999888742 223333322221111100     


Q ss_pred             ----------------------c-cCCCCC--CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          572 ----------------------V-VDPNLG--SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       572 ----------------------~-~d~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                                            . .|....  .+.+........+++..||-.||++|-+.+++++|-
T Consensus       244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP  311 (369)
T KOG0665|consen  244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP  311 (369)
T ss_pred             hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence                                  0 000000  011122345567888899999999999999999974

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.89  E-value=3e-24  Score=225.24  Aligned_cols=258  Identities=23%  Similarity=0.253  Sum_probs=194.7

Q ss_pred             cCCCccchhhHHHhhcCccccceEeeeCceeEEEeeccchH---------------HHHHHHHHHHhccc------cCce
Q 035655          347 DCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRM---------------REFAAEIESLGRLR------HKHL  405 (670)
Q Consensus       347 ~~~~~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~~~---------------~~f~~Ei~~L~~l~------H~nI  405 (670)
                      ++..++.+.|+.  -.+|.+....|+|-|++|.+|.+....               +.=+.|+++|++|+      ..++
T Consensus       419 EGYYrv~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hc  496 (752)
T KOG0670|consen  419 EGYYRVRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHC  496 (752)
T ss_pred             cceEEEehhhhh--cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHH
Confidence            445666666665  357888899999999999999875421               22348999999995      4689


Q ss_pred             eeeeeeeeccCeeEEEEeccCCCCchhhcccCC-ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC
Q 035655          406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD  484 (670)
Q Consensus       406 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~  484 (670)
                      ++|+-.|...+.+|||+|-+ .-+|.+.|.+.+ +-.|....+..++.|+..||..|-.   .+|+|.||||.|||+++.
T Consensus       497 lrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~  572 (752)
T KOG0670|consen  497 LRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNES  572 (752)
T ss_pred             HHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccC
Confidence            99999999999999999987 569999997743 3458889999999999999999998   899999999999999976


Q ss_pred             C-cEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCc-chhHHHHHH
Q 035655          485 M-NARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH-FILVDWVLE  562 (670)
Q Consensus       485 ~-~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~-~~~~~~~~~  562 (670)
                      . .+||||||-|.....+.   .+...-+.-|.|||++.+-+|+...|+||.||.||||.||+-.|.+.. ..+..+..+
T Consensus       573 k~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me  649 (752)
T KOG0670|consen  573 KNILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFME  649 (752)
T ss_pred             cceeeeccCcccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHH
Confidence            5 46999999998765543   222344567999999999999999999999999999999999997621 111111111


Q ss_pred             Hh--------hcCC---------------------------cccccCC------CCC-----CcccHHHHHHHHHHHHhh
Q 035655          563 FQ--------HLGQ---------------------------VLDVVDP------NLG-----SSYVVAEMELVLQLGLLC  596 (670)
Q Consensus       563 ~~--------~~~~---------------------------~~~~~d~------~l~-----~~~~~~~~~~l~~l~~~C  596 (670)
                      +.        ..+.                           ++..+.|      .+.     ..-.......+.+|+..|
T Consensus       650 ~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkm  729 (752)
T KOG0670|consen  650 LKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKM  729 (752)
T ss_pred             hcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHH
Confidence            00        0000                           0111111      000     111233456788899999


Q ss_pred             ccCCCCCCCCHHHHHHH
Q 035655          597 SHQKAEARPTMRQVLRY  613 (670)
Q Consensus       597 l~~dP~~RPs~~evl~~  613 (670)
                      +..||.+|-+..|.|+|
T Consensus       730 l~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  730 LILDPEKRITVNQALKH  746 (752)
T ss_pred             hccChhhcCCHHHHhcC
Confidence            99999999999999875

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.89  E-value=7.8e-24  Score=218.93  Aligned_cols=185  Identities=28%  Similarity=0.436  Sum_probs=154.9

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEE
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~l  420 (670)
                      ...+.|..+++||+|.|++||++++..                 ......+|+++|..+. +.||+++.+++..++..++
T Consensus        33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~i  112 (418)
T KOG1167|consen   33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAI  112 (418)
T ss_pred             hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEE
Confidence            445678889999999999999998754                 1245679999999995 8999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-CcEEEEeecCceecc
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFD  499 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-~~~kL~DFGla~~~~  499 (670)
                      |+||++.....+++.     .++..++...+..+..||.++|.   ++||||||||+|+|.+.. ++-.|.|||||...+
T Consensus       113 vlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d  184 (418)
T KOG1167|consen  113 VLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD  184 (418)
T ss_pred             EecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHHH
Confidence            999999999888873     46788899999999999999999   999999999999999754 578999999997221


Q ss_pred             CC--------------Cc-----------------------------ceeeccccCcCCCCcccccc-CCCCccchhHHH
Q 035655          500 HG--------------KI-----------------------------SHTTNVVGTIGYIAPELART-GKASCSTDVFAY  535 (670)
Q Consensus       500 ~~--------------~~-----------------------------~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~  535 (670)
                      ..              ..                             ......+||+||.|||++.. +..+++.||||.
T Consensus       185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~  264 (418)
T KOG1167|consen  185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA  264 (418)
T ss_pred             hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence            00              00                             00112479999999998764 567899999999


Q ss_pred             HHHHHHHHhCCCCCCC
Q 035655          536 GVLLLEIATGRRPIDS  551 (670)
Q Consensus       536 Gvvl~el~tG~~pf~~  551 (670)
                      |+|++-+++++.||-.
T Consensus       265 GVI~Lslls~~~PFf~  280 (418)
T KOG1167|consen  265 GVILLSLLSRRYPFFK  280 (418)
T ss_pred             cceeehhhcccccccc
Confidence            9999999999999854

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=5.6e-21  Score=203.13  Aligned_cols=242  Identities=22%  Similarity=0.214  Sum_probs=182.7

Q ss_pred             CccccceEeeeCceeEEEeeccch-----------------HHHHHHHHHHHhcccc----Cceeeeeeee-eccCeeEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLRH----KHLVNLQGWC-KRKRDLLL  420 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~-----------------~~~f~~Ei~~L~~l~H----~nIv~l~g~~-~~~~~~~l  420 (670)
                      +|.+.++||+|+||.||++.....                 ...+..|+.++..+.+    +++.++++.. ..+...++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            799999999999999999985431                 1157789999999973    6888999888 47778899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-----CcEEEEeecCc
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-----MNARLGDFGLA  495 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-----~~~kL~DFGla  495 (670)
                      ||+.+ +.+|.++........++..+.++|+.|++.+|.+||+   .+++||||||.|+++...     ..+.|.|||++
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            99988 8899998766555689999999999999999999998   999999999999999865     46999999999


Q ss_pred             e--eccCCCc-----c-e-eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhh
Q 035655          496 R--LFDHGKI-----S-H-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQH  565 (670)
Q Consensus       496 ~--~~~~~~~-----~-~-~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~  565 (670)
                      +  .+.....     . . .....||..|.+++...+...+++.|+||++.++.|+..|..||...... ..........
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~  254 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR  254 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence            8  3322111     1 1 22356999999999999999999999999999999999999999653221 1111111111


Q ss_pred             cCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       566 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ....    ..  .....+   ..+.++...+-..+..++|....+.+.|+..
T Consensus       255 ~~~~----~~--~~~~~~---~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~  297 (322)
T KOG1164|consen  255 KLLT----DR--FGDLKP---EEFAKILEYIDSLDYEDKPDYEKLAELLKDV  297 (322)
T ss_pred             hhcc----cc--ccCCCh---HHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence            1100    00  111122   3344444455568899999999999987654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.85  E-value=5.3e-22  Score=193.72  Aligned_cols=233  Identities=20%  Similarity=0.341  Sum_probs=181.0

Q ss_pred             ccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCC
Q 035655          366 QSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS  429 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gs  429 (670)
                      ...+|.+..-|..|+|++.+                ..++|..|.-.|+-+.||||+.++|.|.....+.++..||+.||
T Consensus       194 l~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  194 LITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            34568888999999998865                23678899999999999999999999999999999999999999


Q ss_pred             chhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeecc
Q 035655          430 LDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV  509 (670)
Q Consensus       430 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~  509 (670)
                      |...|++...-..+..+..+++.++|+|++|||+- ++-|..--|.+..+++|++..++|+= +-+++.-     .....
T Consensus       274 lynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~kfsf-----qe~gr  346 (448)
T KOG0195|consen  274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTKFSF-----QEVGR  346 (448)
T ss_pred             HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-ccceeee-----ecccc
Confidence            99999988877889999999999999999999983 34444556899999999999887631 1111110     11112


Q ss_pred             ccCcCCCCccccccCCCC---ccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          510 VGTIGYIAPELARTGKAS---CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       510 ~gt~~y~aPE~~~~~~~t---~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      .-.+.||+||.++..+-+   ..+|+|||.+++|||.|...||..-..-..           -+.+.-..++-..++...
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec-----------gmkialeglrv~ippgis  415 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC-----------GMKIALEGLRVHIPPGIS  415 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh-----------hhhhhhccccccCCCCcc
Confidence            346789999998876543   579999999999999999999975221111           011112233344455556


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+|+.-|++.||.+||.+.+|+-.|++
T Consensus       416 ~hm~klm~icmnedpgkrpkfdmivpilek  445 (448)
T KOG0195|consen  416 RHMNKLMNICMNEDPGKRPKFDMIVPILEK  445 (448)
T ss_pred             HHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence            678889999999999999999999988875

>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

Probab=99.84  E-value=1.3e-19  Score=181.45  Aligned_cols=187  Identities=24%  Similarity=0.267  Sum_probs=130.4

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      +.+.|+|.+. ++.|+||++..++.|+++|+.|+++             ++|+|+|+|+|.... ..+||||||+++|..
T Consensus        22 w~~~G~a~~~-~~~i~LT~~~~~~~G~~~~~~pi~~-------------~~F~~~f~F~i~~~~-~~~gdG~af~~~~~~   86 (218)
T cd07308          22 WTVGGSTVIT-KNYIRLTPDVPSQSGSLWSRVPIPA-------------KDFEIEVEFSIHGGS-GLGGDGFAFWYTEEP   86 (218)
T ss_pred             eEEcCCeEEe-CCEEEeCCCCCCCEeEEEeCCCccC-------------CCEEEEEEEEEeCCC-CCCCCEEEEEEECCC
Confidence            9999999997 8999999998899999999999976             579999999998763 568999999999865


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecC-Cccccc------ccccccccCCCccc
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVN-SMKSIK------LEPAAYYENGTKED  194 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvn-s~~s~~------~~~~~~~~~~~~~~  194 (670)
                      .    ..|..+|.       ....+-+||||||+.| .   +-...+|.+-+| +..+..      ....+.      -.
T Consensus        87 ~----~~g~~~G~-------~~~~~Glai~fdt~~n-~---~~~~p~i~~~~Ndg~~~~~~~~d~~~~~~~~------c~  145 (218)
T cd07308          87 G----SDGPLFGG-------PDKFKGLAIFFDTYDN-D---GKGFPSISVFLNDGTKSYDYETDGEKLELAS------CS  145 (218)
T ss_pred             C----CCCccccc-------CCCCCEEEEEEEcCCC-C---CCCCCeEEEEEeCCCceecccCCCccccccc------ee
Confidence            3    23444554       2234569999999988 3   333344544333 211110      011000      11


Q ss_pred             cccC-CCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEeecCCceeeeEEEe
Q 035655          195 FTLE-SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFIL  273 (670)
Q Consensus       195 ~~l~-~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsastg~~~~~h~i~  273 (670)
                      +... ++++++++|.|+  .+.|.|.+.....         ...  .+-..++. ..+|+.+|+||||+||...+.|+|+
T Consensus       146 ~~~~~~~~~~~~~I~y~--~~~l~v~i~~~~~---------~~~--~~c~~~~~-~~l~~~~y~G~sA~tg~~~d~~dIl  211 (218)
T cd07308         146 LKFRNSNAPTTLRISYL--NNTLKVDITYSEG---------NNW--KECFTVED-VILPSQGYFGFSAQTGDLSDNHDIL  211 (218)
T ss_pred             EecccCCCCeEEEEEEE--CCEEEEEEeCCCC---------CCc--cEEEEcCC-cccCCCCEEEEEeccCCCcCcEEEE
Confidence            2222 268999999999  6788888864321         111  12222221 1467889999999999999999999


Q ss_pred             ccccc
Q 035655          274 GWSFS  278 (670)
Q Consensus       274 sW~fs  278 (670)
                      +|.+.
T Consensus       212 s~~~~  216 (218)
T cd07308         212 SVHTY  216 (218)
T ss_pred             EEEee
Confidence            99874

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "ba

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.84  E-value=1.1e-19  Score=189.17  Aligned_cols=246  Identities=29%  Similarity=0.402  Sum_probs=187.0

Q ss_pred             ccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccC-ceeeeeeeeeccCeeEEEEeccC
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHK-HLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~-nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      |...+.||.|+|+.||++....                ....|.+|+.+++.+.|+ +|+++.+.+......++++|++.
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   81 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD   81 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence            5667889999999999997652                256788999999999988 79999999977777899999999


Q ss_pred             CCCchhhcccCCc-cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceeccCCCcc
Q 035655          427 NGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       427 ~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~~~~~  504 (670)
                      +++|.+++..... ..+.......++.|++.++.|+|+   .+++||||||+||+++... .++++|||+++........
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~  158 (384)
T COG0515          82 GGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST  158 (384)
T ss_pred             CCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence            9999977654432 268899999999999999999999   8899999999999999998 7999999999865543322


Q ss_pred             -----eeeccccCcCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCC
Q 035655          505 -----HTTNVVGTIGYIAPELART---GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       505 -----~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~  575 (670)
                           ......||..|++||.+..   ..+....|+|++|++++++++|..||...... ............... ....
T Consensus       159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~  237 (384)
T COG0515         159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SLAS  237 (384)
T ss_pred             ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-cccc
Confidence                 2356689999999999987   57889999999999999999999997654320 001111111111000 0001


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .............+.+++..|+..+|..|.+..+....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            11111112223466788888999999999999987765

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.84  E-value=1.1e-20  Score=201.51  Aligned_cols=151  Identities=21%  Similarity=0.197  Sum_probs=119.4

Q ss_pred             HHhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceee-eeeeeec
Q 035655          358 YTATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVN-LQGWCKR  414 (670)
Q Consensus       358 ~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~-l~g~~~~  414 (670)
                      .....+|...+.||+|+||+||+|....                      ..+.|.+|+++|++++|+|+++ ++++   
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---   90 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---   90 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence            3446789999999999999999996532                      0234789999999999999985 4432   


Q ss_pred             cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEeccc-CCCcEEecCCCcEEEEeec
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV-KSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDI-kp~NILld~~~~~kL~DFG  493 (670)
                       +..++||||+++++|... ...     .   ...++.|++++|.|||+   .+|+|||| ||+|||++.++++||+|||
T Consensus        91 -~~~~LVmE~~~G~~L~~~-~~~-----~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFG  157 (365)
T PRK09188         91 -GKDGLVRGWTEGVPLHLA-RPH-----G---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQ  157 (365)
T ss_pred             -CCcEEEEEccCCCCHHHh-Ccc-----c---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence             457999999999999632 111     1   14678999999999999   99999999 9999999999999999999


Q ss_pred             CceeccCCCcc-------eeeccccCcCCCCccccccC
Q 035655          494 LARLFDHGKIS-------HTTNVVGTIGYIAPELARTG  524 (670)
Q Consensus       494 la~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~  524 (670)
                      +|+........       ..+...+++.|+|||++...
T Consensus       158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            99976543211       11356788999999988643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=1.1e-20  Score=214.03  Aligned_cols=238  Identities=21%  Similarity=0.244  Sum_probs=178.5

Q ss_pred             cccceEeeeCceeEEEeeccchH-----H-----------------HHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          365 KQSEVIGTGGFGEVYKGVLPTRM-----R-----------------EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~~~~-----~-----------------~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ...+.+|.|.+|.|+........     +                 .+..|+.+=..|+|||++..+..+.+.....-.|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            35678999999976655432211     1                 1335666667789999998888888777666669


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++ +|...+...  ..++..++..+++|++.|+.|||+   .+|.|||+|++|++++.++.+||+|||.+.......
T Consensus       401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~  474 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW  474 (601)
T ss_pred             hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence            99999 999998654  358888999999999999999999   999999999999999999999999999998765543


Q ss_pred             c---ceeeccccCcCCCCccccccCCCCc-cchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          503 I---SHTTNVVGTIGYIAPELARTGKASC-STDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       503 ~---~~~~~~~gt~~y~aPE~~~~~~~t~-ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .   ......+|+..|+|||++....|.+ -.||||.|+++..|++|+.||.........+   ..... ........-.
T Consensus       475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~~~-~~~~~~~~~~  550 (601)
T KOG0590|consen  475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTNNY-SDQRNIFEGP  550 (601)
T ss_pred             chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---hhhcc-ccccccccCh
Confidence            2   3445678999999999999999875 5899999999999999999986522111110   00000 0000000001


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR  612 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  612 (670)
                      .........+...++..+++.+|.+|-++++|++
T Consensus       551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            1223344567788999999999999999999987

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.81  E-value=6.8e-20  Score=198.94  Aligned_cols=216  Identities=24%  Similarity=0.396  Sum_probs=163.8

Q ss_pred             HhccccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCC
Q 035655          397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS  476 (670)
Q Consensus       397 L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp  476 (670)
                      |+.+.|.|+.+++|.|.++...+.|.+||..|+|.+.+... ...++|.....++++++.||.|||..  +-..|+.+++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNS--PIGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcC--cceeeeeecc
Confidence            46789999999999999999999999999999999999764 45799999999999999999999992  3339999999


Q ss_pred             CcEEecCCCcEEEEeecCceeccCC-CcceeeccccCcCCCCccccccC-------CCCccchhHHHHHHHHHHHhCCCC
Q 035655          477 GNVLIDADMNARLGDFGLARLFDHG-KISHTTNVVGTIGYIAPELARTG-------KASCSTDVFAYGVLLLEIATGRRP  548 (670)
Q Consensus       477 ~NILld~~~~~kL~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~t~ksDV~S~Gvvl~el~tG~~p  548 (670)
                      +|+++|..+.+||.|||+....... .........-..-|.|||.++..       ..+.+.||||||++++|+++.+.|
T Consensus        78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen   78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP  157 (484)
T ss_pred             ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence            9999999999999999998776431 11111222334579999998764       146789999999999999999999


Q ss_pred             CCCCcchh--HHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCC
Q 035655          549 IDSDHFIL--VDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDEL  619 (670)
Q Consensus       549 f~~~~~~~--~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  619 (670)
                      |+......  .+.+.....  .......|.+....  +....++.++..||..+|.+||++++|-..++....
T Consensus       158 ~~~~~~~~~~~eii~~~~~--~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKK--GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             cccccccCChHHHHHHHHh--cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence            98622211  112222111  11222233322111  334468899999999999999999999998875533

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.73  E-value=1.9e-17  Score=166.52  Aligned_cols=184  Identities=22%  Similarity=0.309  Sum_probs=158.6

Q ss_pred             CccccceEeeeCceeEEEeecc--------------chHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEeccCC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLP--------------TRMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~--------------~~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +|.+.++||+|.||..+.|..-              ....++..|.+..+.|. .++|..++-+..++..-.||+|++ |
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-G  107 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-G  107 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-C
Confidence            6888999999999999999642              24467888999998886 589999998888888889999998 7


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-----CcEEEEeecCceeccCCC
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-----MNARLGDFGLARLFDHGK  502 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-----~~~kL~DFGla~~~~~~~  502 (670)
                      -||+|...- .+..++.+++..+|+|++.-++|+|+   +.+|.|||||+|.||..-     ..+.++|||+|+.+....
T Consensus       108 PSLEDLFD~-CgR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  108 PSLEDLFDL-CGRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             cCHHHHHHH-hcCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence            899887643 34579999999999999999999999   999999999999999643     358999999999876543


Q ss_pred             c------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 035655          503 I------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS  551 (670)
Q Consensus       503 ~------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~  551 (670)
                      .      ...+...||.+||+=....+.+.+.+.|+-|+|-|+++.+-|..||++
T Consensus       184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG  238 (449)
T KOG1165|consen  184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG  238 (449)
T ss_pred             ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence            2      234557899999999999999999999999999999999999999987

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.73  E-value=1.9e-17  Score=161.67  Aligned_cols=171  Identities=19%  Similarity=0.105  Sum_probs=130.5

Q ss_pred             ccccceEeeeCceeEEEeeccch------------------HHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEec
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPTR------------------MREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~~------------------~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      +.+...|++|+||+||....++.                  ...|.+|+++|++|. |+++++++++    +..+++|||
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey   79 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY   79 (218)
T ss_pred             cccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence            34567899999999997654331                  124779999999996 4889999887    446999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEeccc-CCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV-KSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDI-kp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      +++.+|.+.+..         ....++.|++.+|.++|+   .+|+|||| ||+|||++.++.++|+|||++........
T Consensus        80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~  147 (218)
T PRK12274         80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR  147 (218)
T ss_pred             ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence            999998764311         113578899999999999   99999999 79999999999999999999986554331


Q ss_pred             c----e--------eeccccCcCCCCccccccC-CCC-ccchhHHHHHHHHHHHhCCCCCC
Q 035655          504 S----H--------TTNVVGTIGYIAPELARTG-KAS-CSTDVFAYGVLLLEIATGRRPID  550 (670)
Q Consensus       504 ~----~--------~~~~~gt~~y~aPE~~~~~-~~t-~ksDV~S~Gvvl~el~tG~~pf~  550 (670)
                      .    .        ..-...++.|+.|+...-- ..+ ...+-++-|+.+|.++|++.+.-
T Consensus       148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~  208 (218)
T PRK12274        148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW  208 (218)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence            0    0        0112467889999854322 233 46788899999999999988753

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.73  E-value=4.4e-18  Score=164.16  Aligned_cols=243  Identities=20%  Similarity=0.241  Sum_probs=178.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhcccc-CceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRH-KHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H-~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ...|...++||+|+||.+|.|..-.              ...++.-|.++.+.|++ ..|..+..+..+.+.-.+||+..
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL   93 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL   93 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence            4578999999999999999997533              23467789999999986 67888888888888999999998


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC---CcEEEEeecCceeccCCC
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---MNARLGDFGLARLFDHGK  502 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~---~~~kL~DFGla~~~~~~~  502 (670)
                       +.||++...-.. ..++..+++-++-|++.-++|+|.   ++++||||||+|.|..-+   .++.|+|||+|+.+....
T Consensus        94 -GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~  168 (341)
T KOG1163|consen   94 -GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR  168 (341)
T ss_pred             -CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence             789998875443 368999999999999999999998   999999999999998643   468999999998765432


Q ss_pred             c------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          503 I------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       503 ~------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      .      .......||..|.+-....+...+.+.|+-|+|.+|..+--|..||++-......-..+... +.-+...-..
T Consensus       169 t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~-EkK~s~~ie~  247 (341)
T KOG1163|consen  169 TRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKIS-EKKMSTPIEV  247 (341)
T ss_pred             ccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHH-HhhcCCCHHH
Confidence            1      22345689999998888878888999999999999999999999998732211110001000 1111111111


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +...++    .++.-.+.-|-..--++-|...-+.+.
T Consensus       248 LC~G~P----~EF~myl~Y~R~L~F~E~Pdy~ylrql  280 (341)
T KOG1163|consen  248 LCKGFP----AEFAMYLNYCRGLGFEEKPDYMYLRQL  280 (341)
T ss_pred             HhCCCc----HHHHHHHHHHhhcCCCCCCcHHHHHHH
Confidence            222232    334445556777777788876555544

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.72  E-value=2e-18  Score=195.70  Aligned_cols=235  Identities=21%  Similarity=0.220  Sum_probs=166.7

Q ss_pred             CccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHH--hccccCceeeeeeeeeccCeeEEEEecc
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESL--GRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L--~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ++...+.||++.|=+|.+|.++.               ..+.|.++++-+  ..++|||.+++.-+-......|+|-+|.
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv  103 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV  103 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence            45556777888777777766544               245666555444  4558999999999988888889999998


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee--ccCCCc
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL--FDHGKI  503 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~--~~~~~~  503 (670)
                      .+ +|.|.|.  .+.-+...+...|+.|++.||..+|.   .+|+|+|||.+|||++.-.-+.|+||.--+-  ...+..
T Consensus       104 kh-nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP  177 (1431)
T KOG1240|consen  104 KH-NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP  177 (1431)
T ss_pred             hh-hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence            54 8888884  34457888888999999999999998   9999999999999999998999999976542  122222


Q ss_pred             ceee----ccccCcCCCCccccccC-----------CCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHH-Hhhc
Q 035655          504 SHTT----NVVGTIGYIAPELARTG-----------KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLE-FQHL  566 (670)
Q Consensus       504 ~~~~----~~~gt~~y~aPE~~~~~-----------~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~-~~~~  566 (670)
                      ..-+    +.....+|+|||.+...           ..+++-||||+||++.||++ |+.||+-..  +.++... ....
T Consensus       178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ--L~aYr~~~~~~~  255 (1431)
T KOG1240|consen  178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ--LLAYRSGNADDP  255 (1431)
T ss_pred             ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH--HHhHhccCccCH
Confidence            2211    12334589999965431           25788999999999999998 788886311  1111000 0000


Q ss_pred             CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       567 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +.+++.+           +-..+.++++.|++.||++|-++++.++.-.+
T Consensus       256 e~~Le~I-----------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG  294 (1431)
T KOG1240|consen  256 EQLLEKI-----------EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG  294 (1431)
T ss_pred             HHHHHhC-----------cCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence            0111110           01246789999999999999999999987554

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=3.2e-17  Score=168.14  Aligned_cols=196  Identities=24%  Similarity=0.266  Sum_probs=137.4

Q ss_pred             ccCceeeeeeeeec---------------------------cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHH
Q 035655          401 RHKHLVNLQGWCKR---------------------------KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG  453 (670)
Q Consensus       401 ~H~nIv~l~g~~~~---------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~q  453 (670)
                      +|||||++.+.|.+                           ...+|+||.-.+ .+|..|+..+.   .+.....-|+.|
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~---~s~r~~~~~laQ  349 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH---RSYRTGRVILAQ  349 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC---CchHHHHHHHHH
Confidence            59999999998732                           235789988764 58999986543   455566779999


Q ss_pred             HHHHhhhccccccceEEecccCCCcEEe--cCCC--cEEEEeecCceeccCCC-----cceeeccccCcCCCCccccccC
Q 035655          454 IAAGLLYLHEEWEQVVIHRDVKSGNVLI--DADM--NARLGDFGLARLFDHGK-----ISHTTNVVGTIGYIAPELARTG  524 (670)
Q Consensus       454 ia~gL~yLH~~~~~~ivHrDIkp~NILl--d~~~--~~kL~DFGla~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~  524 (670)
                      +++|+.|||.   ++|.|||+|++|||+  |++.  ...|+|||++-.-+...     ....-...|...-||||+....
T Consensus       350 lLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~  426 (598)
T KOG4158|consen  350 LLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV  426 (598)
T ss_pred             HHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence            9999999998   999999999999998  4443  57899999885433211     1122234677889999987543


Q ss_pred             C--C----CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhcc
Q 035655          525 K--A----SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSH  598 (670)
Q Consensus       525 ~--~----t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~  598 (670)
                      +  .    -.|+|.|+.|.+.||++....||.....-..+..       ...+.--|.+    +..+...+.+++...++
T Consensus       427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r-------~Yqe~qLPal----p~~vpp~~rqlV~~lL~  495 (598)
T KOG4158|consen  427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR-------TYQESQLPAL----PSRVPPVARQLVFDLLK  495 (598)
T ss_pred             CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh-------hhhhhhCCCC----cccCChHHHHHHHHHhc
Confidence            2  1    3589999999999999999999976222111111       1111111222    22233456778888999


Q ss_pred             CCCCCCCCHHHHHHHh
Q 035655          599 QKAEARPTMRQVLRYL  614 (670)
Q Consensus       599 ~dP~~RPs~~evl~~L  614 (670)
                      .||++||+..-....|
T Consensus       496 r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  496 RDPSKRVSPNIAANVL  511 (598)
T ss_pred             CCccccCCccHHHhHH
Confidence            9999999976555544

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.70  E-value=1e-17  Score=166.76  Aligned_cols=158  Identities=16%  Similarity=0.170  Sum_probs=122.2

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc--------------hH---------HHHHHHHHHHhccccCceeeeeeeeecc-
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT--------------RM---------REFAAEIESLGRLRHKHLVNLQGWCKRK-  415 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~---------~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-  415 (670)
                      ..++|+..+.+|.|+||.||+.....              ..         ..|.+|+..+.+++|++|..+..++... 
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            36789999999999999999864421              11         1267999999999999999998885532 


Q ss_pred             -------CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEE
Q 035655          416 -------RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR  488 (670)
Q Consensus       416 -------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~k  488 (670)
                             +..++||||++|.+|.++..      ++.    ....+++.+|..||+   .+++||||||+||++++++ ++
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g-i~  174 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG-LR  174 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-EE
Confidence                   35899999999999988731      222    346699999999998   9999999999999999988 99


Q ss_pred             EEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh
Q 035655          489 LGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT  544 (670)
Q Consensus       489 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t  544 (670)
                      |+|||...........             ..+.....+..++|+|+||+.+.-+..
T Consensus       175 liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~~  217 (232)
T PRK10359        175 IIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYKK  217 (232)
T ss_pred             EEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHHH
Confidence            9999988755332111             013334456679999999998876543

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.69  E-value=1e-16  Score=164.39  Aligned_cols=217  Identities=20%  Similarity=0.264  Sum_probs=140.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcccc----------Cceeeeeeee
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRH----------KHLVNLQGWC  412 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H----------~nIv~l~g~~  412 (670)
                      ..+...+.||.|+++.||.+++..                   ..+++++|.-.+..+.+          -.++--++..
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~   91 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL   91 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred             eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence            445667899999999999998754                   35667777766655432          1222222221


Q ss_pred             ---------eccC--------eeEEEEeccCCCCchhhccc---C--CccccCHHHHHHHHHHHHHHhhhccccccceEE
Q 035655          413 ---------KRKR--------DLLLVYDYIPNGSLDSLLFD---N--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI  470 (670)
Q Consensus       413 ---------~~~~--------~~~lV~E~~~~gsL~~~l~~---~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iv  470 (670)
                               ....        +.+++|+-+ -++|.+++.-   .  ....+....++.+..|+++.+++||+   .+++
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlV  167 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLV  167 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceE
Confidence                     1111        347788877 5688887632   1  12345667778888999999999999   9999


Q ss_pred             ecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCcccccc--------CCCCccchhHHHHHHHHHH
Q 035655          471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART--------GKASCSTDVFAYGVLLLEI  542 (670)
Q Consensus       471 HrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~t~ksDV~S~Gvvl~el  542 (670)
                      |+||||+|++++.+|.++|+||+.....+...   .. ...+..|.+||....        -.++.+.|.|++|+++|.|
T Consensus       168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~---~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l  243 (288)
T PF14531_consen  168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY---RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL  243 (288)
T ss_dssp             EST-SGGGEEE-TTS-EEE--GGGEEETTEEE---EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred             ecccceeeEEEcCCCCEEEcChHHHeecCcee---ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence            99999999999999999999998776544321   11 345678999997643        2578899999999999999


Q ss_pred             HhCCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCC
Q 035655          543 ATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEAR  604 (670)
Q Consensus       543 ~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R  604 (670)
                      .||+.||+..... ..+|                .+ ..+. +.++.+..|+...|+.+|.+|
T Consensus       244 WC~~lPf~~~~~~~~~~~----------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  244 WCGRLPFGLSSPEADPEW----------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHSS-STCCCGGGSTSGG----------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HHccCCCCCCCccccccc----------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            9999999853211 0011                11 1233 556788889999999999988

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.68  E-value=6.3e-17  Score=158.54  Aligned_cols=126  Identities=19%  Similarity=0.212  Sum_probs=96.8

Q ss_pred             cceEeeeCceeEEEeeccch------------------------HHHH-----------------HHHHHHHhccccCce
Q 035655          367 SEVIGTGGFGEVYKGVLPTR------------------------MREF-----------------AAEIESLGRLRHKHL  405 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~~------------------------~~~f-----------------~~Ei~~L~~l~H~nI  405 (670)
                      ...||+|+||.||+|..+.+                        ...|                 ..|++.|.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            46799999999999986431                        0112                 239999999988776


Q ss_pred             eeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhc-cccccceEEecccCCCcEEecCC
Q 035655          406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL-HEEWEQVVIHRDVKSGNVLIDAD  484 (670)
Q Consensus       406 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~ivHrDIkp~NILld~~  484 (670)
                      .....+.  ....++||||+++++|...+..  ...+++.+..+++.|++.+|.|| |+   .+|+||||||+|||++ +
T Consensus        82 ~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli~-~  153 (190)
T cd05147          82 PCPEPIL--LKSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLYH-D  153 (190)
T ss_pred             CCCcEEE--ecCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEE-C
Confidence            4332221  1234899999999877655322  23688999999999999999999 56   7999999999999998 4


Q ss_pred             CcEEEEeecCceeccC
Q 035655          485 MNARLGDFGLARLFDH  500 (670)
Q Consensus       485 ~~~kL~DFGla~~~~~  500 (670)
                      +.++|+|||++....+
T Consensus       154 ~~v~LiDFG~a~~~~~  169 (190)
T cd05147         154 GKLYIIDVSQSVEHDH  169 (190)
T ss_pred             CcEEEEEccccccCCC
Confidence            7899999999975433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10345 hypothetical protein; Provisional

Probab=99.66  E-value=3e-16  Score=155.53  Aligned_cols=122  Identities=16%  Similarity=0.222  Sum_probs=97.4

Q ss_pred             ccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc-----ccCceeeeeeeeeccC---e-eE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL-----RHKHLVNLQGWCKRKR---D-LL  419 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l-----~H~nIv~l~g~~~~~~---~-~~  419 (670)
                      +...+.||+|+||.||.  .+.               ..+.+.+|+.+++++     .||||++++|+++++.   . ..
T Consensus         4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            34567899999999996  322               345789999999999     5799999999998863   3 34


Q ss_pred             EEEec--cCCCCchhhcccCCccccCHHHHHHHHHHHHHHh-hhccccccceEEecccCCCcEEecC----CCcEEEEee
Q 035655          420 LVYDY--IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL-LYLHEEWEQVVIHRDVKSGNVLIDA----DMNARLGDF  492 (670)
Q Consensus       420 lV~E~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL-~yLH~~~~~~ivHrDIkp~NILld~----~~~~kL~DF  492 (670)
                      +|+||  +++|+|.+++.+.   .+++.  ..++.|++.++ +|||+   ++|+||||||+|||++.    +.+++|+||
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            78999  6689999999553   35555  35678888787 99999   99999999999999974    348999995


Q ss_pred             cCc
Q 035655          493 GLA  495 (670)
Q Consensus       493 Gla  495 (670)
                      +.+
T Consensus       154 ~G~  156 (210)
T PRK10345        154 IGE  156 (210)
T ss_pred             CCC
Confidence            544

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.66  E-value=2.8e-17  Score=175.41  Aligned_cols=173  Identities=25%  Similarity=0.360  Sum_probs=130.4

Q ss_pred             eeEEEEeccCCCCchhhcccC-CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCc
Q 035655          417 DLLLVYDYIPNGSLDSLLFDN-ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA  495 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla  495 (670)
                      .+++.|++|...+|.+||..+ .....+|...+++++|++.|+.|      ++.+|||+||.||+...+..+||+|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence            589999999999999999743 34568899999999999999999      57899999999999999999999999998


Q ss_pred             eeccCCC-----cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCc
Q 035655          496 RLFDHGK-----ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQV  569 (670)
Q Consensus       496 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~  569 (670)
                      .......     ....+...||..||+||.+.+..|+.|+||||||++|+|++. -..+++              ..+..
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e--------------r~~t~  469 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE--------------RIATL  469 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH--------------HHHhh
Confidence            7665544     334566799999999999999999999999999999999987 233322              11111


Q ss_pred             ccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 035655          570 LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQV  610 (670)
Q Consensus       570 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  610 (670)
                      .++-|..+...+..+.+ .=..++.+++.+.|.+||+..++
T Consensus       470 ~d~r~g~ip~~~~~d~p-~e~~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  470 TDIRDGIIPPEFLQDYP-EEYTLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             hhhhcCCCChHHhhcCc-HHHHHHHHhcCCCcccCchHHHH
Confidence            11212222111111111 12357778999999999954443

>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain

Probab=99.65  E-value=1.4e-14  Score=146.32  Aligned_cols=195  Identities=17%  Similarity=0.169  Sum_probs=122.4

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      +.+.|+|.+. ++.|+||++...+.|+++|+.|+++             .+|+|+|+|+|.+.....+||||||+++...
T Consensus        22 w~~~G~a~v~-~~~IrLTp~~~~~~G~~w~~~p~~~-------------~~F~~~f~F~I~~~~~~~~GdGlAfw~t~~~   87 (248)
T cd06901          22 WDFLGSTMVT-SQYIRLTPDHQSKQGSIWNRVPCYL-------------RDWEMHVHFKVHGSGKNLFGDGFAIWYTKER   87 (248)
T ss_pred             EEEcceEEEc-CCeEEECCCCCCCEEEEeccCCccC-------------CCEEEEEEEEEeCCCCCCCCCEEEEEEEcCC
Confidence            9999999997 7799999998888999999999976             5799999999998766678999999999764


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCC-CCCCCCeeEEec-CCcccccccccccccCCCcc--cccc
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNET-SDSQGNHVGINV-NSMKSIKLEPAAYYENGTKE--DFTL  197 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~-~Dp~~~Hvgidv-ns~~s~~~~~~~~~~~~~~~--~~~l  197 (670)
                      .    ..|..+|--+.       -.=+||-|||+.| .+. .....+-|-+-+ ++...-....-+.  .....  ....
T Consensus        88 ~----~~G~~fG~~~~-------f~Gl~I~~Dt~~n-~~~~~~~~~P~i~~~~NDGt~~yd~~~Dg~--~~~~~~C~~~~  153 (248)
T cd06901          88 M----QPGPVFGSKDN-------FHGLAIFFDTYSN-QNGEHEHVHPYISAMVNNGSLSYDHDRDGT--HTELAGCSAPF  153 (248)
T ss_pred             C----ccCcccccCCC-------CceEEEEEECCCC-CCCcccCCCceEEEEEcCCCeeecccCCCc--hhhcCceeeec
Confidence            2    23333343221       1127999999988 321 011112232222 2211100000000  00000  0112


Q ss_pred             -CCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcc-cccccceeeEeecCCceeeeEEEecc
Q 035655          198 -ESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSP-AFQETMYVGFSASTGRKVSSHFILGW  275 (670)
Q Consensus       198 -~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~-~l~~~~~vGFsastg~~~~~h~i~sW  275 (670)
                       ..+.+.+++|.|...  .+.|.+...+.        .. -...+    +... .||...|+||||+||...+.|+|++-
T Consensus       154 rn~~~~t~~rI~Y~~~--~l~v~vd~~~~--------~~-w~~Cf----~~~~v~LP~~~yfGiSA~Tg~~sd~hdIlsv  218 (248)
T cd06901         154 RNKDHDTFVAIRYSKG--RLTVMTDIDGK--------NE-WKECF----DVTGVRLPTGYYFGASAATGDLSDNHDIISM  218 (248)
T ss_pred             cCCCCCeEEEEEEECC--eEEEEEecCCC--------Cc-eeeeE----EeCCeecCCCCEEEEEecCCCCCCcEEEEEE
Confidence             235667899999964  57676653221        00 01111    1222 46777999999999998899999886


Q ss_pred             cccc
Q 035655          276 SFSM  279 (670)
Q Consensus       276 ~fs~  279 (670)
                      .+..
T Consensus       219 ~~~~  222 (248)
T cd06901         219 KLYE  222 (248)
T ss_pred             EEec
Confidence            6654

The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded she

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.65  E-value=7.5e-16  Score=151.12  Aligned_cols=127  Identities=20%  Similarity=0.207  Sum_probs=98.5

Q ss_pred             cceEeeeCceeEEEeeccch-----------------------------------------HHHHHHHHHHHhccccCce
Q 035655          367 SEVIGTGGFGEVYKGVLPTR-----------------------------------------MREFAAEIESLGRLRHKHL  405 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~~-----------------------------------------~~~f~~Ei~~L~~l~H~nI  405 (670)
                      ...||+|++|.||+|....+                                         ...+..|.+.+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            46899999999999986420                                         0012478899999999987


Q ss_pred             eeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       406 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                      .....+...  ..++||||++++++......  ...++..+..+++.|++.+|.+||+  +.+|+||||||+|||++ ++
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-~~  154 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-DG  154 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-CC
Confidence            544333322  24899999998865443222  2357788999999999999999997  37999999999999999 89


Q ss_pred             cEEEEeecCceeccC
Q 035655          486 NARLGDFGLARLFDH  500 (670)
Q Consensus       486 ~~kL~DFGla~~~~~  500 (670)
                      .++|+|||++....+
T Consensus       155 ~~~liDFG~a~~~~~  169 (190)
T cd05145         155 KPYIIDVSQAVELDH  169 (190)
T ss_pred             CEEEEEcccceecCC
Confidence            999999999986654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.64  E-value=4.3e-17  Score=177.14  Aligned_cols=170  Identities=27%  Similarity=0.358  Sum_probs=143.6

Q ss_pred             EeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEeccCC
Q 035655          370 IGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      +|+|.||.|++..--.                     .......|-.++...+ ||.++++.-.++.+..++++.++..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            5788888887643211                     1113446778888887 99999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |.|...+.+..  .++..........++-++.++|+   .+++|||+|++||+++.+|.+++.|||+++..-..+..   
T Consensus        82 g~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~---  153 (612)
T KOG0603|consen   82 GDLFTRLSKEV--MFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA---  153 (612)
T ss_pred             chhhhccccCC--chHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhhc---
Confidence            99998886553  47777788888999999999998   99999999999999999999999999999866543322   


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS  551 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~  551 (670)
                        +||..|||||++.  ......|-||||++++||++|..||..
T Consensus       154 --cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  154 --CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             --ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence              8999999999988  456789999999999999999999986

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.64  E-value=7.9e-16  Score=174.73  Aligned_cols=128  Identities=20%  Similarity=0.272  Sum_probs=108.6

Q ss_pred             HHHhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeec
Q 035655          357 LYTATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR  414 (670)
Q Consensus       357 l~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~  414 (670)
                      .......|...++||+|+||.||+|.+..                      ..+.+.+|++++++++|++++....++..
T Consensus       328 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~  407 (535)
T PRK09605        328 EEEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD  407 (535)
T ss_pred             ccccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence            33444556778999999999999975432                      11347789999999999999988888877


Q ss_pred             cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                      ....++||||+++++|.+++.          ...+++.+++++|.|||+   .+++||||||+|||+ .++.++|+|||+
T Consensus       408 ~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGl  473 (535)
T PRK09605        408 PEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGL  473 (535)
T ss_pred             CCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCcc
Confidence            778899999999999999874          456799999999999998   899999999999999 678999999999


Q ss_pred             ceec
Q 035655          495 ARLF  498 (670)
Q Consensus       495 a~~~  498 (670)
                      ++..
T Consensus       474 a~~~  477 (535)
T PRK09605        474 GKYS  477 (535)
T ss_pred             cccC
Confidence            9753

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.60  E-value=2.1e-15  Score=174.74  Aligned_cols=235  Identities=19%  Similarity=0.189  Sum_probs=167.7

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccchH------------HHHHHHHHHHhccc---cCceeeeeeeeeccCeeEEEEe
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPTRM------------REFAAEIESLGRLR---HKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~~~------------~~f~~Ei~~L~~l~---H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ..-..|.+.+.||+|+||+||+|...++.            =+|.--.+++.||+   -+-|..+.....-.+.-+||+|
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e  774 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSE  774 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence            34456888999999999999999876621            12333445566666   2334444444455677899999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-------CCcEEEEeecCce
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-------DMNARLGDFGLAR  496 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-------~~~~kL~DFGla~  496 (670)
                      |.+.|+|.+++.  ..+.++|..+..++.|++..+..||.   .+|||+||||+|.||..       +.-++|+|||.+-
T Consensus       775 y~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si  849 (974)
T KOG1166|consen  775 YSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI  849 (974)
T ss_pred             ccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence            999999999996  44579999999999999999999999   99999999999999942       3458999999986


Q ss_pred             eccC-CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          497 LFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       497 ~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      .+.- .....-+..++|-.+-.+|...+.+++++.|.|.++.+++-|+.|+..=               ........+++
T Consensus       850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q---------------~~~g~~~~~~~  914 (974)
T KOG1166|consen  850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME---------------VKNGSSWMVKT  914 (974)
T ss_pred             eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH---------------hcCCcceeccc
Confidence            4432 1123445668899999999999999999999999999999999987431               11111122233


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+..-...+....+..+++   ++|-..=|...++...|++
T Consensus       915 ~~~Ry~~~~~W~~~F~~lL---N~~~~~~p~l~~lr~~~~~  952 (974)
T KOG1166|consen  915 NFPRYWKRDMWNKFFDLLL---NPDCDTLPNLQELRTELEE  952 (974)
T ss_pred             cchhhhhHHHHHHHHHHHh---CcCcccchhHHHHHHHHHH
Confidence            2222223333444555444   4555555777777766653

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.59  E-value=3.1e-15  Score=148.88  Aligned_cols=120  Identities=23%  Similarity=0.365  Sum_probs=103.3

Q ss_pred             ceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          368 EVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      +.||+|++|.||+|...+                      ....+.+|+.++..++|+++.....++...+..++||||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            579999999999996422                      1134678999999999999988777777778899999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      ++++|.+++...     .+ .+..++.+++.+|.+||+   .+++|+|++|.|||++ ++.++|+|||++..
T Consensus        82 ~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         82 EGEPLKDLINSN-----GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            999999998542     22 888999999999999999   8999999999999999 78999999998864

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.56  E-value=6.5e-15  Score=145.21  Aligned_cols=116  Identities=22%  Similarity=0.348  Sum_probs=96.6

Q ss_pred             eEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          369 VIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       369 ~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .||+|+||.||+|....                      ....+.+|++++..++|+++.....++...+..++||||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            37999999999998422                      12446689999999999876655555566677899999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      +++|.+++.....         .++.+++.+|.+||+   .+++|+|++|.||+++ ++.+++.|||+++.
T Consensus        81 g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        81 GKPLKDVIEEGND---------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CccHHHHHhhcHH---------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            9999998744211         789999999999998   9999999999999999 88999999999865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.54  E-value=6.9e-13  Score=132.37  Aligned_cols=195  Identities=18%  Similarity=0.208  Sum_probs=126.9

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      ..+.|+|.+. ++.|+||++..++.|.++.+.|++.             -+|+.+|+|+|.... ..+||||||.+....
T Consensus        24 W~~~G~t~~~-~~~IrLTp~~~~~~G~iw~~~~~~~-------------~~w~ie~~Fri~g~~-~~~gdG~a~W~t~~~   88 (225)
T cd06902          24 WSHGGDAIAS-LEQVRLTPSLRSKKGSVWTKNPFSF-------------ENWEVEVTFRVTGRG-RIGADGLAIWYTKER   88 (225)
T ss_pred             eEecccEEec-CCEEEECCCCCCCEEEEeeCCCcCC-------------CCEEEEEEEEEecCC-CCCCCEEEEEEECCC
Confidence            8899999996 8899999998999999999999963             469999999998653 357899999998754


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecC-CcccccccccccccCCCcc--cccc-
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVN-SMKSIKLEPAAYYENGTKE--DFTL-  197 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvn-s~~s~~~~~~~~~~~~~~~--~~~l-  197 (670)
                      .    ..|..+|.-+.       -.=+||.|||+.| .+  ..+...|-+-+| +.+......-..  .....  .... 
T Consensus        89 ~----~~G~~~G~~~~-------f~Gl~I~~Dt~~n-~~--~~~~p~i~~~~NDGt~~yd~~~D~~--~~~~~~C~~~~r  152 (225)
T cd06902          89 G----EEGPVFGSSDK-------WNGVGIFFDSFDN-DG--KKNNPAILVVGNDGTKSYDHQNDGL--TQALGSCLRDFR  152 (225)
T ss_pred             C----CCCCccCCCCc-------ccEEEEEEECCCC-CC--CCCCcEEEEEECCCCeeccccCCCc--ccccceEEEecc
Confidence            2    23444544222       1236999999987 22  223345544333 222111100000  00000  1122 


Q ss_pred             CCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcc-cccccceeeEeecCCceeeeEEEeccc
Q 035655          198 ESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSP-AFQETMYVGFSASTGRKVSSHFILGWS  276 (670)
Q Consensus       198 ~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~-~l~~~~~vGFsastg~~~~~h~i~sW~  276 (670)
                      ..+.+.+++|.|..  .+|.|.+.....          +...-...-.++.. .||+..|+||||+||...+.|+|++|.
T Consensus       153 n~~~p~~~rI~Y~~--~~l~V~~d~~~~----------~~~~~~~~Cf~~~~v~LP~~~yfGiSA~Tg~l~d~hDIls~~  220 (225)
T cd06902         153 NKPYPVRAKITYYQ--NVLTVSINNGFT----------PNKDDYELCTRVENMVLPPNGYFGVSAATGGLADDHDVLSFL  220 (225)
T ss_pred             CCCCCeEEEEEEEC--CeEEEEEeCCcC----------CCCCcccEEEecCCeeCCCCCEEEEEecCCCCCCcEeEEEEE
Confidence            23568999999988  468888763211          11111111223333 467889999999999999999999999


Q ss_pred             ccc
Q 035655          277 FSM  279 (670)
Q Consensus       277 fs~  279 (670)
                      +.+
T Consensus       221 ~~s  223 (225)
T cd06902         221 TFS  223 (225)
T ss_pred             Eec
Confidence            863

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherite

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.51  E-value=4.2e-14  Score=139.61  Aligned_cols=130  Identities=21%  Similarity=0.234  Sum_probs=101.1

Q ss_pred             hHHHhhcCccccceEeeeCceeEEEeeccch-------------------------------------HHHHHHHHHHHh
Q 035655          356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPTR-------------------------------------MREFAAEIESLG  398 (670)
Q Consensus       356 ~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~~-------------------------------------~~~f~~Ei~~L~  398 (670)
                      ++......|...+.||+|+||.||++..+.+                                     ...+..|+.++.
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            3334444477789999999999999977421                                     012567889999


Q ss_pred             ccccCc--eeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCC
Q 035655          399 RLRHKH--LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS  476 (670)
Q Consensus       399 ~l~H~n--Iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp  476 (670)
                      .+.|++  +.+.++.    ...++||||+++++|......        .....++.+++.++.++|+   .+++||||||
T Consensus        89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p  153 (198)
T cd05144          89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYK---HGIIHGDLSE  153 (198)
T ss_pred             HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCc
Confidence            998874  4444443    355899999999999776421        2345788999999999999   8999999999


Q ss_pred             CcEEecCCCcEEEEeecCceeccC
Q 035655          477 GNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       477 ~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      +||++++++.++|+|||++.....
T Consensus       154 ~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         154 FNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             ccEEEcCCCcEEEEECCccccCCC
Confidence            999999999999999999965544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.51  E-value=2.5e-14  Score=162.89  Aligned_cols=208  Identities=25%  Similarity=0.295  Sum_probs=138.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccchHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCcc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF  440 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~  440 (670)
                      ..+|..++.|-.|+||.||..+++...+.|..      +++..|+|-= +.-..-+..+.|      |+=...+....  
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~------kiNkq~lilR-nilt~a~npfvv------gDc~tllk~~g--  146 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM------KINKQNLILR-NILTFAGNPFVV------GDCATLLKNIG--  146 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhh------cccccchhhh-ccccccCCccee------chhhhhcccCC--
Confidence            45788899999999999999999888887764      2232222210 011111222333      33333332222  


Q ss_pred             ccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc--------------cee
Q 035655          441 VLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI--------------SHT  506 (670)
Q Consensus       441 ~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~--------------~~~  506 (670)
                      .++-        +++.+++|||+   .+|+|||+||+|.+++.-|.+|+.|||+.+.......              -..
T Consensus       147 ~lPv--------dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~d  215 (1205)
T KOG0606|consen  147 PLPV--------DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQD  215 (1205)
T ss_pred             CCcc--------hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhh
Confidence            2332        22789999999   9999999999999999999999999999875432110              112


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      +.++||+.|.|||++....|..-.|-|++|+|+||.+-|+.||.++-. .+...+..  ......+. |+.+        
T Consensus       216 KqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vis--d~i~wpE~-dea~--------  284 (1205)
T KOG0606|consen  216 KQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS--DDIEWPEE-DEAL--------  284 (1205)
T ss_pred             ccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhh--hhcccccc-CcCC--------
Confidence            346899999999999988999999999999999999999999987522 22221111  11111111 2222        


Q ss_pred             HHHHHHHHHhhccCCCCCCC
Q 035655          586 MELVLQLGLLCSHQKAEARP  605 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RP  605 (670)
                      ..+..+++...++.+|.+|-
T Consensus       285 p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  285 PPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             CHHHHHHHHHHHHhChHhhc
Confidence            23455666777889999984

>smart00090 RIO RIO-like kinase

Probab=99.51  E-value=5.3e-14  Score=142.68  Aligned_cols=128  Identities=21%  Similarity=0.275  Sum_probs=99.5

Q ss_pred             CccccceEeeeCceeEEEee-c-cc-----------hH----------------------------HHHHHHHHHHhccc
Q 035655          363 GFKQSEVIGTGGFGEVYKGV-L-PT-----------RM----------------------------REFAAEIESLGRLR  401 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~-~-~~-----------~~----------------------------~~f~~Ei~~L~~l~  401 (670)
                      .|++.+.||+|++|.||+|+ . ..           ..                            ..+..|+..+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47788999999999999998 2 11           00                            12457999999997


Q ss_pred             cCc--eeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce-EEecccCCCc
Q 035655          402 HKH--LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV-VIHRDVKSGN  478 (670)
Q Consensus       402 H~n--Iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-ivHrDIkp~N  478 (670)
                      +..  +.+++++    ...++||||+++++|...+...  ..+...+...++.|++.+|.+||+   .+ ++||||||+|
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~N  179 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYN  179 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhh
Confidence            633  4444543    2358999999998887765332  245666778999999999999999   88 9999999999


Q ss_pred             EEecCCCcEEEEeecCceeccC
Q 035655          479 VLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       479 ILld~~~~~kL~DFGla~~~~~  500 (670)
                      |+++ +++++|+|||.+....+
T Consensus       180 Ili~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      180 ILVH-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             EEEE-CCCEEEEEChhhhccCC
Confidence            9999 88999999999875443

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.47  E-value=1.3e-13  Score=128.03  Aligned_cols=123  Identities=22%  Similarity=0.209  Sum_probs=105.3

Q ss_pred             ccceEeeeCceeEEEeeccc----------h--HHHHHHHHHHHhcccc--CceeeeeeeeeccCeeEEEEeccCCCCch
Q 035655          366 QSEVIGTGGFGEVYKGVLPT----------R--MREFAAEIESLGRLRH--KHLVNLQGWCKRKRDLLLVYDYIPNGSLD  431 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~----------~--~~~f~~Ei~~L~~l~H--~nIv~l~g~~~~~~~~~lV~E~~~~gsL~  431 (670)
                      +.+.||+|.++.||++...+          .  ...+.+|+..++.++|  .+++++++++...+..++++||++++.+.
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             cceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            35789999999999987632          1  2478999999999987  59999999988888999999999988776


Q ss_pred             hhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          432 SLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       432 ~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .+         +......++.+++++|++||.....+++|+|++|+||++++.+.+++.|||.+..
T Consensus        82 ~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          82 EV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             cC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            54         5567788999999999999985445899999999999999989999999998864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=1.2e-14  Score=165.15  Aligned_cols=240  Identities=23%  Similarity=0.255  Sum_probs=177.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~l  420 (670)
                      ...|...+.||+|.|+.|-......                   .......|..+-..+. |+|++++++...+.+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            3456677789999999987654422                   1122224777777776 9999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcc-ccccceEEecccCCCcEEecCCC-cEEEEeecCceec
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH-EEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLF  498 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~  498 (670)
                      +.||..++++.+-+........+....-..+.|+..++.|+| +   .++.||||||+|.+++..+ ..|++|||+|..+
T Consensus        99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhccc
Confidence            999999999999884222224556667789999999999999 6   8999999999999999999 9999999999877


Q ss_pred             cC--CCcceeecccc-CcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          499 DH--GKISHTTNVVG-TIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       499 ~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ..  +........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++........          ......
T Consensus       176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~----------~~~~~~  245 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR----------YSSWKS  245 (601)
T ss_pred             cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc----------ceeecc
Confidence            66  33333445678 9999999998874 4467899999999999999999998753221111          011111


Q ss_pred             CC--CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          575 PN--LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       575 ~~--l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..  ..............++...++..+|..|.+.+++...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d  286 (601)
T KOG0590|consen  246 NKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD  286 (601)
T ss_pred             cccccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence            10  0011112223445677778888999999999887653

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.40  E-value=2.9e-13  Score=136.53  Aligned_cols=203  Identities=20%  Similarity=0.308  Sum_probs=141.8

Q ss_pred             HHHhccccCceeeeeeeeecc-----CeeEEEEeccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccc
Q 035655          395 ESLGRLRHKHLVNLQGWCKRK-----RDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ  467 (670)
Q Consensus       395 ~~L~~l~H~nIv~l~g~~~~~-----~~~~lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~  467 (670)
                      .-|-.+-|.|||+++.|+.+.     .+..++.|||+.|+|..+|++-  ....+......+++.||..||.|||+ |.+
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P  197 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence            445566799999999987644     3578999999999999999763  23457888889999999999999998 679


Q ss_pred             eEEecccCCCcEEecCCCcEEEEeecCceecc---CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh
Q 035655          468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFD---HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT  544 (670)
Q Consensus       468 ~ivHrDIkp~NILld~~~~~kL~DFGla~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t  544 (670)
                      .|+|+++..+.|++..++-+|++----.....   ...........+-++|.+||+-.....+..+|||+||+..+||.-
T Consensus       198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai  277 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI  277 (458)
T ss_pred             ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence            99999999999999999999885322111100   000111222356789999998887788889999999999999988


Q ss_pred             CCCC-CCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          545 GRRP-IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       545 G~~p-f~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      +.-- -........+-    . ..+..-.....+           -...+..|++..|..||+|++++.|.
T Consensus       278 lEiq~tnseS~~~~ee----~-ia~~i~~len~l-----------qr~~i~kcl~~eP~~rp~ar~llfHp  332 (458)
T KOG1266|consen  278 LEIQSTNSESKVEVEE----N-IANVIIGLENGL-----------QRGSITKCLEGEPNGRPDARLLLFHP  332 (458)
T ss_pred             heeccCCCcceeehhh----h-hhhheeeccCcc-----------ccCcCcccccCCCCCCcchhhhhcCc
Confidence            6543 22211111100    0 000100011111           12355679999999999999988764

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.38  E-value=1.6e-12  Score=132.16  Aligned_cols=100  Identities=25%  Similarity=0.228  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHhccccCce--eeeeeeeeccC----eeEEEEeccCC-CCchhhcccCCccccCHHHHHHHHHHHHHHhhh
Q 035655          388 REFAAEIESLGRLRHKHL--VNLQGWCKRKR----DLLLVYDYIPN-GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY  460 (670)
Q Consensus       388 ~~f~~Ei~~L~~l~H~nI--v~l~g~~~~~~----~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~y  460 (670)
                      ..+.+|++++.+|+|++|  ++.++++....    ..++|+|++++ .+|.+++.+.   .++..    .+.+++.+|.+
T Consensus        85 ~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~  157 (239)
T PRK01723         85 TRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIAR  157 (239)
T ss_pred             hHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHH
Confidence            346789999999999885  67777654332    23599999997 6998887542   34443    36789999999


Q ss_pred             ccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       461 LH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      ||+   .+|+||||||.|||++.++.++|+|||.+..
T Consensus       158 lH~---~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        158 FHD---AGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHH---CCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            999   9999999999999999999999999998875

>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.33  E-value=7.4e-11  Score=116.81  Aligned_cols=184  Identities=20%  Similarity=0.248  Sum_probs=117.4

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      ..+.|+|.+. ++.|+||++ .++.|.++-+.|+++-            .+|..+|+|+|..+. ..+||||||.+...+
T Consensus        23 W~~~G~t~v~-~~~IrLTp~-~s~~G~iWs~~pl~~~------------~~w~ie~~Fri~G~~-~~~gdGla~W~t~~~   87 (215)
T cd06903          23 WQTSGNPKLE-SGRIILTPP-GNQRGSLWLKKPLSLK------------DEWTIEWTFRSTGPE-GRSGGGLNFWLVKDG   87 (215)
T ss_pred             eEEcCcEEee-CCeEEECCC-CCceEeEeeCCcCCCC------------CCEEEEEEEEecccC-CcCCCEEEEEEECCC
Confidence            8999999997 889999999 9999999999999761            179999999998653 378999999998654


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcccccccccccccCCCcc--ccc-cC
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKE--DFT-LE  198 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~~~~~~~~~~~~~--~~~-l~  198 (670)
                      ..+.+  ....|-.+.   .+    =+||.|||+.| .   .|  .+.++--++-....... . . .....  .+. ..
T Consensus        88 ~~~~g--~~~fG~~~~---f~----Gl~I~~Dt~~n-~---~p--~i~~~~NDGt~~yd~~~-d-~-~~~~g~C~~~~rn  149 (215)
T cd06903          88 NADVG--TSSIYGPSK---FD----GLQLLIDNNGG-S---GG--SLRGFLNDGSKDYKNED-V-D-SLAFGSCLFAYQD  149 (215)
T ss_pred             cccCC--ccccCCCCC---Cc----EEEEEEECCCC-C---Cc--eEEEEECCCCeeccccC-C-c-ccccceeeEeccC
Confidence            32111  022222111   11    16999999976 1   12  12222222322111111 0 0 00000  011 23


Q ss_pred             CCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccc-cccCCccccc-ccceeeEeecCCceeeeEEEeccc
Q 035655          199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLS-LPLDLSPAFQ-ETMYVGFSASTGRKVSSHFILGWS  276 (670)
Q Consensus       199 ~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls-~~~dl~~~l~-~~~~vGFsastg~~~~~h~i~sW~  276 (670)
                      .+.+.+++|.|....+.|.|.+..  .             ..+. ..+    .|| .-.|+||||+||...+.|+|++-.
T Consensus       150 ~~~p~~iri~Y~~~~~~l~v~vd~--~-------------~Cf~~~~v----~lP~~~y~fGiSAaTg~~~d~hdIl~~~  210 (215)
T cd06903         150 SGVPSTIRLSYDALNSLFKVQVDN--R-------------LCFQTDKV----QLPQGGYRFGITAANADNPESFEILKLK  210 (215)
T ss_pred             CCCCEEEEEEEECCCCEEEEEECC--C-------------EEEecCCe----ecCCCCCEEEEEEcCCCCCCcEEEEEEE
Confidence            567899999999877788888742  1             1111 112    345 456799999999999999999865


Q ss_pred             c
Q 035655          277 F  277 (670)
Q Consensus       277 f  277 (670)
                      +
T Consensus       211 ~  211 (215)
T cd06903         211 V  211 (215)
T ss_pred             E
Confidence            4

EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.30  E-value=6.3e-12  Score=122.54  Aligned_cols=124  Identities=23%  Similarity=0.273  Sum_probs=86.5

Q ss_pred             cceEeeeCceeEEEeeccch-----------------HHHH----------------------HHHHHHHhccccCc--e
Q 035655          367 SEVIGTGGFGEVYKGVLPTR-----------------MREF----------------------AAEIESLGRLRHKH--L  405 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~~-----------------~~~f----------------------~~Ei~~L~~l~H~n--I  405 (670)
                      .+.||+|+||.||++....+                 ...+                      ..|...+.++.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            46799999999999987621                 0111                      24555555554432  3


Q ss_pred             eeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       406 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                      .+.++.    ...++||||++++.+.........  .. .+..+++.+++.++.++|.  +.+|+||||||+||+++ ++
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~-~~  151 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD-DG  151 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE-CC
Confidence            333332    246899999999654322111100  11 5678899999999999997  37899999999999999 89


Q ss_pred             cEEEEeecCceeccC
Q 035655          486 NARLGDFGLARLFDH  500 (670)
Q Consensus       486 ~~kL~DFGla~~~~~  500 (670)
                      .++|+|||.+.....
T Consensus       152 ~~~liDfg~a~~~~~  166 (187)
T cd05119         152 KVYIIDVPQAVEIDH  166 (187)
T ss_pred             cEEEEECcccccccC
Confidence            999999999975543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates

Probab=99.24  E-value=3.4e-10  Score=113.91  Aligned_cols=196  Identities=22%  Similarity=0.275  Sum_probs=116.4

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      ..+.|+|.+. ++.|+||++.+++.|.++.+.|++.             .+|+.+|+|+|.......+||||||.+....
T Consensus        24 W~~~G~t~i~-~~~IrLTp~~~~~~G~iws~~~~~~-------------~~w~i~~~Fri~g~~~~~~g~G~a~W~t~~~   89 (229)
T PF03388_consen   24 WDIGGSTVIT-DNFIRLTPDRQSQSGSIWSRKPIPF-------------DNWEIEFTFRISGQEKGLGGDGMAFWYTKDP   89 (229)
T ss_dssp             EEEEET-EEE-SSEEEEE-SSTTEEEEEEESS-BEE-------------SEEEEEEEEEEESS-SSS-S-EEEEEEESSS
T ss_pred             EEECCeEEec-CCEEEECCCcccCEEEEEEcCCCCc-------------cCEEEEEEEEEeccccCcCCCeEEEEEEcCc
Confidence            8999999998 9999999999999999999999976             4699999999998755668999999998654


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCC-CCCCCeeEEecC-CcccccccccccccCCCcc--cccc
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETS-DSQGNHVGINVN-SMKSIKLEPAAYYENGTKE--DFTL  197 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~-Dp~~~Hvgidvn-s~~s~~~~~~~~~~~~~~~--~~~l  197 (670)
                      ..    .|..+|.-+.-       .=+||=||||.| .+.. .-....|.+-+| +-.......-+.  .....  ....
T Consensus        90 ~~----~G~~fG~~~~f-------~Gl~i~idt~~N-~~~~~~~~~p~i~~~~NDGt~~~~~~~dg~--~~~~~~C~~~~  155 (229)
T PF03388_consen   90 GS----DGPVFGGPDKF-------DGLGIFIDTYDN-DEGGHKRGFPYISAMLNDGTKSYDHDNDGK--DQSLGSCSADY  155 (229)
T ss_dssp             SS----SCSBTTB-SS--------EEEEEEEEES-T-TCTTCTSTSSEEEEEEEESSS---GGGTTT--TT-SEEEE---
T ss_pred             cc----cccccCCCccc-------ceEEEEEEcccC-CCcccccccceEEEEecCCCccccccccCc--ccccccceecc
Confidence            32    44555542211       126899999988 3311 122344544444 211111110000  00111  1122


Q ss_pred             C-CCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEeecCCceeeeEEEeccc
Q 035655          198 E-SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWS  276 (670)
Q Consensus       198 ~-~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsastg~~~~~h~i~sW~  276 (670)
                      . .+.+.+++|.|...  .+.|.+...-.+.      ...-...+...   .-.||+..|+||||+||...+.|+|++-.
T Consensus       156 rn~~~p~~~ri~Y~~~--~l~v~id~~~~~~------~~~~~~Cf~~~---~v~LP~~~yfGvSA~Tg~~~d~hdi~s~~  224 (229)
T PF03388_consen  156 RNSDVPTRIRISYSKN--TLTVSIDSNYLKN------QDDWELCFTTD---GVDLPEGYYFGVSAATGELSDNHDILSVK  224 (229)
T ss_dssp             BTESSEEEEEEEEETT--EEEEEEETSCCSE------CCTTEEEEEES---TEEGGSSBEEEEEEEESSSGGEEEEEEEE
T ss_pred             CcCCCCEEEEEEEECC--eEEEEEecccccC------CcCCcEEEEcC---CeecCCCCEEEEEecCCCCCCcEEEEEEE
Confidence            2 35678999999875  5666664210000      01111222211   12467889999999999999999998743

This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first members of the family of animal lectins similar to the leguminous plant lectins []. The alignment for this family is towards the N terminus, where the similarity of VIP36 and ERGIC-53 is greatest. Although they have been identified as a family of animal lectins, this alignment also includes yeast sequences[]. ERGIC-53 is a 53kDa protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin []. Its dysfunction has been associated with combined factors V and VIII deficiency, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein-secreting pathway [,]. The L-type lectin-like domain has an overall globular shape composed of a beta-sandwich of two major twisted antiparallel beta-sheets. The beta-sandwich comprises a major concave beta-sheet and a minor convex beta-sheet, in a variation of the jelly roll fold [, , , ]. ; GO: 0016020 membrane; PDB: 3A4U_A 3LCP_B 2A6Z_A 2A71_C 2A70_B 2A6Y_A 2A6X_A 2A6W_B 2A6V_B 2E6V_B ....

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.18  E-value=2.8e-11  Score=132.24  Aligned_cols=232  Identities=21%  Similarity=0.279  Sum_probs=167.7

Q ss_pred             CccccceEee--eCceeEEEeec--cchH------------------HHHHHHHHHHhccc-cCceeeeeeeeeccCeeE
Q 035655          363 GFKQSEVIGT--GGFGEVYKGVL--PTRM------------------REFAAEIESLGRLR-HKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       363 ~f~~~~~lG~--G~fg~Vykg~~--~~~~------------------~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~  419 (670)
                      .|...+.+|.  |.+|.||.+..  +...                  ..=.+|+....+++ |+|.++....+.+.+.++
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            4566788999  99999999877  3311                  11125666666664 899999888888899999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHH----HhhhccccccceEEecccCCCcEEecCC-CcEEEEeecC
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA----GLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGL  494 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~----gL~yLH~~~~~~ivHrDIkp~NILld~~-~~~kL~DFGl  494 (670)
                      +-.|++ +.+|..+.+.... .++....+....+..+    ||.++|+   ..++|-|+||.||++..+ ..++++|||+
T Consensus       195 iqtE~~-~~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~~  269 (524)
T KOG0601|consen  195 IQTELC-GESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFGL  269 (524)
T ss_pred             eeeccc-cchhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcce
Confidence            999988 5788888765432 3666777778888888    9999999   999999999999999999 8999999999


Q ss_pred             ceeccCCCc----ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcc
Q 035655          495 ARLFDHGKI----SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVL  570 (670)
Q Consensus       495 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~  570 (670)
                      ...+.....    .......|...|++||... +.++..+|+|++|.+++|..++..+.....  ...|.  ..+..   
T Consensus       270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~--~~~W~--~~r~~---  341 (524)
T KOG0601|consen  270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGK--NSSWS--QLRQG---  341 (524)
T ss_pred             eEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCC--CCCcc--ccccc---
Confidence            988766542    1223346888999999765 567889999999999999999877654321  01121  00000   


Q ss_pred             cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 035655          571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR  612 (670)
Q Consensus       571 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  612 (670)
                        .   +..++...-...+...+..+++.+|..|++.+.+..
T Consensus       342 --~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  342 --Y---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             --c---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence              0   111111111223344777889999999999888776

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.08  E-value=5.3e-10  Score=123.36  Aligned_cols=165  Identities=19%  Similarity=0.243  Sum_probs=127.2

Q ss_pred             eEeeeCceeEEEeeccch--HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHH
Q 035655          369 VIGTGGFGEVYKGVLPTR--MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ  446 (670)
Q Consensus       369 ~lG~G~fg~Vykg~~~~~--~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~  446 (670)
                      ....|++-.|+.......  .....+-++.|+.||||||++++...+..+..|||.|-+.  .|..++.+     +....
T Consensus        33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~~~  105 (690)
T KOG1243|consen   33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-----LGKEE  105 (690)
T ss_pred             eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-----hHHHH
Confidence            445677888887776666  4556788999999999999999999999999999999873  56666643     33556


Q ss_pred             HHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCC
Q 035655          447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA  526 (670)
Q Consensus       447 ~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  526 (670)
                      ..-.+.||+.||.+||+.  ..++|++|....|++++.|..||++|.++........ ......--..|..|+.+.... 
T Consensus       106 v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~-  181 (690)
T KOG1243|consen  106 VCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE-  181 (690)
T ss_pred             HHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc-
Confidence            667889999999999973  7899999999999999999999999998864433221 111112223566777544322 


Q ss_pred             CccchhHHHHHHHHHHHhC
Q 035655          527 SCSTDVFAYGVLLLEIATG  545 (670)
Q Consensus       527 t~ksDV~S~Gvvl~el~tG  545 (670)
                       ...|.|.|||+++|++.|
T Consensus       182 -~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  182 -WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             -cchhhhhHHHHHHHHhCc
Confidence             457999999999999999

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.05  E-value=3.4e-10  Score=124.93  Aligned_cols=104  Identities=19%  Similarity=0.231  Sum_probs=72.4

Q ss_pred             HHHHHHHHhccc----cCceeeeeeee-eccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHH-Hhhhccc
Q 035655          390 FAAEIESLGRLR----HKHLVNLQGWC-KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA-GLLYLHE  463 (670)
Q Consensus       390 f~~Ei~~L~~l~----H~nIv~l~g~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~-gL~yLH~  463 (670)
                      |..|...+.+++    |.+-+.+-..+ ......+|||||++|++|.++...... ..   .+.+++.+++. .+..+|.
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~  275 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLR  275 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHh
Confidence            334555555553    32223333333 224567999999999999987643211 12   23456666666 4677887


Q ss_pred             cccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       464 ~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                         .+++|+|+||.||+++.+++++++|||++.....
T Consensus       276 ---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       276 ---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             ---CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence               8999999999999999999999999999976653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.95  E-value=1.5e-09  Score=103.88  Aligned_cols=117  Identities=21%  Similarity=0.164  Sum_probs=85.2

Q ss_pred             cceEeeeCceeEEEeeccc----------h---HHHHHHHHHHHhccccCcee-eeeeeeeccCeeEEEEeccCCCCchh
Q 035655          367 SEVIGTGGFGEVYKGVLPT----------R---MREFAAEIESLGRLRHKHLV-NLQGWCKRKRDLLLVYDYIPNGSLDS  432 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~----------~---~~~f~~Ei~~L~~l~H~nIv-~l~g~~~~~~~~~lV~E~~~~gsL~~  432 (670)
                      .+.|+.|.++.||+.....          .   ...+..|+.+++.+.+.+++ +++.+..  ...++||||+++.++.+
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~~   80 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELLT   80 (170)
T ss_pred             eeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcccc
Confidence            4567888888888875432          1   23467899999999766554 4554432  34589999999988865


Q ss_pred             hcccCCccccCHHHHHHHHHHHHHHhhhccccc--cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          433 LLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW--EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       433 ~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      .-       .   ....++.+++++|+.||+..  ..+++|+|++|.||+++ ++.++++||+.+.
T Consensus        81 ~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          81 ED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             cc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            31       0   11245789999999999832  22369999999999999 6789999999875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.84  E-value=1.7e-08  Score=95.33  Aligned_cols=129  Identities=19%  Similarity=0.231  Sum_probs=99.6

Q ss_pred             ccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          366 QSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ....|-+|+-+.|+++.+..                      ..+.-++|++.|.+++--.|.--.-++.+...-+|+||
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            46788899999999887654                      23556789999999876555544445566677789999


Q ss_pred             ccCC-CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC---cEEEEeecCcee
Q 035655          424 YIPN-GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM---NARLGDFGLARL  497 (670)
Q Consensus       424 ~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~---~~kL~DFGla~~  497 (670)
                      |+++ -++.+++..........+....++++|-+.+.-||.   ..++|+||..+||+|..++   .+.++|||++..
T Consensus        91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            9976 478888866543333334447899999999999999   9999999999999997665   458999999864

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.79  E-value=3.9e-09  Score=115.57  Aligned_cols=233  Identities=21%  Similarity=0.210  Sum_probs=160.1

Q ss_pred             HHhhcCccccceEeeeCceeEEEeeccc-------------hHHHHH------HHHHHHhcc-ccCceeeeeeeeeccCe
Q 035655          358 YTATKGFKQSEVIGTGGFGEVYKGVLPT-------------RMREFA------AEIESLGRL-RHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       358 ~~~t~~f~~~~~lG~G~fg~Vykg~~~~-------------~~~~f~------~Ei~~L~~l-~H~nIv~l~g~~~~~~~  417 (670)
                      ..-+.+|..+..||.|.|+.|++.....             ....+.      .|+.+...+ .|.+++++...+...+.
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~  340 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ  340 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence            3445678899999999999999865321             111222      455555555 48888887777777777


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-CcEEEEeecCce
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLAR  496 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-~~~kL~DFGla~  496 (670)
                      .++=-||++++++...+  .-...+....++++..|++.++.++|+   +.++|+|+||+||++..+ +..+++|||++.
T Consensus       341 ~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  341 GYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             ccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcccccccc
Confidence            78999999999887766  223457888899999999999999998   999999999999999876 888999999986


Q ss_pred             eccCCCcceeeccccCcCCC--CccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          497 LFDHGKISHTTNVVGTIGYI--APELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      .+.-..    ......-+++  +|+......+-.+.|+||||.-+.|.+++..--...    ..|       ..+..-.-
T Consensus       416 ~~~~~~----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~----~~~-------~~i~~~~~  480 (524)
T KOG0601|consen  416 RLAFSS----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG----VQS-------LTIRSGDT  480 (524)
T ss_pred             ccceec----ccccccccccccchhhccccccccccccccccccccccccCcccCccc----ccc-------eeeecccc
Confidence            422111    1112223333  566666677889999999999999999876542211    111       11111112


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +.+.+..     +.+..+...+..+++..||...+...+..
T Consensus       481 p~~~~~~-----~~~q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  481 PNLPGLK-----LQLQVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             cCCCchH-----HhhhhhhhhhcCCccccchhhhhhcccch
Confidence            2222211     33445556677899999999888776543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.75  E-value=6.1e-08  Score=94.82  Aligned_cols=98  Identities=20%  Similarity=0.189  Sum_probs=74.8

Q ss_pred             HHHHHHhcccc--CceeeeeeeeeccCeeEEEEeccCCCCchh-hcccCCccccCHHHHHHHHHHHHHHhhhc-cccccc
Q 035655          392 AEIESLGRLRH--KHLVNLQGWCKRKRDLLLVYDYIPNGSLDS-LLFDNENFVLSWEQRFNIIKGIAAGLLYL-HEEWEQ  467 (670)
Q Consensus       392 ~Ei~~L~~l~H--~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~  467 (670)
                      +|++.|+++..  -++.+.+++    ...+|||||+.+..+.. .+.+   ..++..+..++..+++.+|..| |.   .
T Consensus        75 kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~---~  144 (197)
T cd05146          75 KEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKE---C  144 (197)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHh---C
Confidence            89999999964  455666654    56789999997654422 2211   2345556778889999999999 76   8


Q ss_pred             eEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       468 ~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      +++|+||++.|||++ ++.+.|+|||.+....+
T Consensus       145 glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~h  176 (197)
T cd05146         145 NLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             CeecCCCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence            999999999999997 46899999999876554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.75  E-value=1.7e-08  Score=113.14  Aligned_cols=76  Identities=14%  Similarity=0.182  Sum_probs=54.8

Q ss_pred             cCeeEEEEeccCCCCchhh--cccCC--ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC----c
Q 035655          415 KRDLLLVYDYIPNGSLDSL--LFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM----N  486 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~--l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~----~  486 (670)
                      ....+|||||++|+.|.++  +...+  ...+.......++.|+.       .   .+++|+|+||.||+++.++    +
T Consensus       233 st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~---~GffHaDpHPGNIlv~~~g~~~~~  302 (537)
T PRK04750        233 CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------R---DGFFHADMHPGNIFVSYDPPENPR  302 (537)
T ss_pred             CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------h---CCeeeCCCChHHeEEecCCCCCCe
Confidence            3457899999999999874  22211  11233333444444443       2   7899999999999999988    9


Q ss_pred             EEEEeecCceeccC
Q 035655          487 ARLGDFGLARLFDH  500 (670)
Q Consensus       487 ~kL~DFGla~~~~~  500 (670)
                      +++.|||+......
T Consensus       303 i~llDFGivg~l~~  316 (537)
T PRK04750        303 YIALDFGIVGSLNK  316 (537)
T ss_pred             EEEEecceEEECCH
Confidence            99999999987754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.74  E-value=3.1e-08  Score=94.02  Aligned_cols=97  Identities=20%  Similarity=0.297  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccc
Q 035655          388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ  467 (670)
Q Consensus       388 ~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~  467 (670)
                      ..-.+|+.+|.+++--.|..-.=+..+.....|+|||.++-.|.+.+...         +..++..|-.-+.-||.   .
T Consensus        44 ~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~---~  111 (204)
T COG3642          44 ERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHK---A  111 (204)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHh---c
Confidence            34558999999987665555555556778889999999999999888554         25678888888889998   9


Q ss_pred             eEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          468 VVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       468 ~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      +|+|+||.++||++..+. +.++||||+..
T Consensus       112 givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642         112 GIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            999999999999998765 99999999974

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.72  E-value=7.2e-08  Score=96.14  Aligned_cols=127  Identities=22%  Similarity=0.235  Sum_probs=98.2

Q ss_pred             ceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhcccc--CceeeeeeeeeccC---eeEEEEeccC
Q 035655          368 EVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRH--KHLVNLQGWCKRKR---DLLLVYDYIP  426 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H--~nIv~l~g~~~~~~---~~~lV~E~~~  426 (670)
                      +.|+.|..+.||+....+                ....+..|+++++.+++  .++.+++.++....   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            567788888888865432                13467899999999976  34677888776643   5689999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcccc------------------------------------------
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE------------------------------------------  464 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~------------------------------------------  464 (670)
                      +.++.+.+..   ..++..++..++.++++.|..||+.                                          
T Consensus        84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (223)
T cd05154          84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL  160 (223)
T ss_pred             CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence            9998886532   2467788888899999999999852                                          


Q ss_pred             -----------ccceEEecccCCCcEEecC--CCcEEEEeecCcee
Q 035655          465 -----------WEQVVIHRDVKSGNVLIDA--DMNARLGDFGLARL  497 (670)
Q Consensus       465 -----------~~~~ivHrDIkp~NILld~--~~~~kL~DFGla~~  497 (670)
                                 ....++|+|+++.||+++.  ++.+.|+||+.+..
T Consensus       161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                       1356899999999999998  56789999998753

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.60  E-value=1.1e-06  Score=89.19  Aligned_cols=186  Identities=17%  Similarity=0.209  Sum_probs=122.1

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      ..+.|.+.+. +.-++||.+..++.|.++=.+||..             -+|.-.+.|.+..+.....|||||+..+-..
T Consensus        74 W~~~Gstvv~-~~~irLT~d~qsk~GAv~n~~Pv~s-------------~~wev~v~fkv~~~s~~lfgdG~Aiw~t~Er  139 (351)
T KOG3839|consen   74 WNLSGSTVVT-SNYIRLTPDEQSKSGAVWNRQPVFS-------------RDWEVLVHFKVHGQSKNLFGDGMAIWYTKER  139 (351)
T ss_pred             ccccccEEEE-eeeeeccccccccccccccCCCccc-------------cceeEEEEEEEecCCCcccccceEEEeeccc
Confidence            7888999998 6779999999999999999999964             3599999999998877889999999998654


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCee----EEecCCcccccccccccccCCCcc----
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHV----GINVNSMKSIKLEPAAYYENGTKE----  193 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hv----gidvns~~s~~~~~~~~~~~~~~~----  193 (670)
                      ..    .|..+|-++.-       +-+||=.|||.|. + + | ..||    .+.+|-      -+.+|+-..+-.    
T Consensus       140 ~q----~GPvFG~~dkF-------~GL~vfidtY~n~-~-g-~-~~~v~P~isvmv~~------gs~sYD~~~Dg~~tel  198 (351)
T KOG3839|consen  140 AQ----PGPVFGSKDKF-------TGLAVFIDTYGNH-N-G-P-HEHVFPYISVMVNI------GSLSYDHSKDGTHTEL  198 (351)
T ss_pred             cc----CCCCCCCcccc-------eeEEEEEeccCCc-C-C-C-cccceeeEEEEecc------CCcccccCCCCCcccc
Confidence            33    44555554332       3479999999772 2 1 1 2222    222211      111121000000    


Q ss_pred             ---ccccCCC-CcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccc-ccccceeeEeecCCceee
Q 035655          194 ---DFTLESG-DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPA-FQETMYVGFSASTGRKVS  268 (670)
Q Consensus       194 ---~~~l~~g-~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~-l~~~~~vGFsastg~~~~  268 (670)
                         ...+++. -.-..-|.|+.  ++|++.....+.           .  ....-.++..+ ||.--|+|+||+||...+
T Consensus       199 ~gc~a~~rn~~~dt~~~iry~~--~~l~~~~dl~~~-----------~--~~~~c~~~n~v~lp~g~~fg~SasTGdlSd  263 (351)
T KOG3839|consen  199 AGCTANFRNLPHDTLVVIRYEK--KTLSISIDLEGP-----------N--EWIDCFSLNNVELPLGYFFGVSASTGDLSD  263 (351)
T ss_pred             ccceeeeccCCCcceeEEEecC--CceEEEEecCCC-----------c--eeeeeeeecceecccceEEeeeeccCccch
Confidence               0111111 12356788887  566666554332           2  23444566664 677789999999999999


Q ss_pred             eEEEecccc
Q 035655          269 SHFILGWSF  277 (670)
Q Consensus       269 ~h~i~sW~f  277 (670)
                      .|.|.|-.+
T Consensus       264 ~HdivS~kl  272 (351)
T KOG3839|consen  264 SHDIVSLKL  272 (351)
T ss_pred             hhHHHHhhh
Confidence            999988665

>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain

Probab=98.58  E-value=2e-06  Score=84.34  Aligned_cols=203  Identities=20%  Similarity=0.225  Sum_probs=113.3

Q ss_pred             CCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCCC-CCCCCCCcc
Q 035655           53 SGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHY  131 (670)
Q Consensus        53 ~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~~-~~~~~~g~~  131 (670)
                      +|.||||+...+++|-+.|.++++--+           --...+|.+..-.. ...+|||+||||+-..- ...+..||-
T Consensus        31 ~g~LRLT~~~~nqata~~~~~~FPs~~-----------n~v~veFd~yayg~-~g~GADGia~vLsDasv~p~~G~fGGs   98 (255)
T cd06900          31 NNRLRLTDASGNQATAVTLQRLFPSAG-----------NYVEVEFDYYAYGS-GGNGADGVALVLSDASVTPQAGAFGGS   98 (255)
T ss_pred             cCeEEeccCccCcceeEEEeeeeccCC-----------CeEEEEEEEEEecC-CCCCCceEEEEEeCCCcCCcCCCcCcc
Confidence            689999999999999999999987511           12666777766544 56789999999984332 235778999


Q ss_pred             cccccCCC-CCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcc---ccc-cccccccc-CCCccc-cccC------
Q 035655          132 LGILNSTN-DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMK---SIK-LEPAAYYE-NGTKED-FTLE------  198 (670)
Q Consensus       132 lGl~~~~~-~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~---s~~-~~~~~~~~-~~~~~~-~~l~------  198 (670)
                      ||+--++. ......-.++|-||-|-|+....|....-.|---++|.   |-. +..-.|.. +....+ .+..      
T Consensus        99 LGYa~~~~~~~GfaGGwLGiGlDEyGNFsn~~eg~~~~~g~r~~sV~vRGsg~g~~gY~yl~gt~~~~~~id~~~~~~~~  178 (255)
T cd06900          99 LGYAQRNDGVPGFAGGWLGIGLDEYGNFSNPNEGRNGFSGRRPQSVTVRGSGSGYTGYKYITGTGVLPPGIDNNSTSTPA  178 (255)
T ss_pred             cccccccCCCCccccceEEEEEeccccccCCCCCccCCcccccceEEEECCCCCCcCceEecccCCCCcccccCCCCCCC
Confidence            99976642 22234557899999987742212221111222222221   111 11111111 111111 1111      


Q ss_pred             CCCcEEEEEEec-CcccEEEEEEeecCCcccccccCCCCCCcccc--cccCCc--ccccccceeeEeecCCceeeeEEEe
Q 035655          199 SGDPVQAWIDYD-GVNRLVNVTICPMNKKNKLSFHFGKPSQPLLS--LPLDLS--PAFQETMYVGFSASTGRKVSSHFIL  273 (670)
Q Consensus       199 ~g~~~~a~I~Yd-~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls--~~~dl~--~~l~~~~~vGFsastg~~~~~h~i~  273 (670)
                      -+-.+++.||=. +....|+|.-...+.        .. ..+++.  ..++..  ..+|+..+++|++|||...-.|.|.
T Consensus       179 ~~hrY~i~Ids~~~~~~~vsV~R~~~~g--------g~-~~~~I~~~d~~~~~~q~avP~~f~lS~TgSTGgstN~HEId  249 (255)
T cd06900         179 PGHRYRITIDSTNGDNAWLSVERDIGNG--------GA-YFVVILTFDALAEQNQDAIPENFYLSFTGSTGGSTNTHEID  249 (255)
T ss_pred             CceEEEEEEecCCCCceEEEEEEEccCC--------ce-eEEeecceeeccccCCCCCCccEEEEEEecCCCcccceeec
Confidence            122344444433 222344554432211        00 111221  112333  5789999999999999999999987


Q ss_pred             ccc
Q 035655          274 GWS  276 (670)
Q Consensus       274 sW~  276 (670)
                      ...
T Consensus       250 nf~  252 (255)
T cd06900         250 NFQ  252 (255)
T ss_pred             ceE
Confidence            543

This family includes bacterial proteins homologous to the VcfQ (also known as MshQ) bacterial pilus biogenesis protein. VcfQ is encoded by the vcfQ gene of the type IV pilus gene cluster of Vibrio cholerae and is essential for type IV pilus assembly. VcfQ has a Laminin G-like domain as well as an L-type lectin domain.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.54  E-value=1.9e-07  Score=96.31  Aligned_cols=106  Identities=18%  Similarity=0.189  Sum_probs=82.9

Q ss_pred             HHHHHHHHHhccccCce--eeeeeeeec-----cCeeEEEEeccCCC-CchhhcccCCccccCHHHHHHHHHHHHHHhhh
Q 035655          389 EFAAEIESLGRLRHKHL--VNLQGWCKR-----KRDLLLVYDYIPNG-SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY  460 (670)
Q Consensus       389 ~f~~Ei~~L~~l~H~nI--v~l~g~~~~-----~~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~y  460 (670)
                      .+.+|...+.+|...+|  ++.+++.+.     ....+||+|++++. +|.+++........+...+..++.+++..+.-
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~  153 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD  153 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            47899999998864443  334445433     23578999999986 89998854323345667788999999999999


Q ss_pred             ccccccceEEecccCCCcEEecC-------CCcEEEEeecCcee
Q 035655          461 LHEEWEQVVIHRDVKSGNVLIDA-------DMNARLGDFGLARL  497 (670)
Q Consensus       461 LH~~~~~~ivHrDIkp~NILld~-------~~~~kL~DFGla~~  497 (670)
                      ||.   .+|+|+|++++|||++.       +..+.|+||+.++.
T Consensus       154 LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        154 MHA---AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHH---CcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            999   99999999999999975       46899999998853

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.51  E-value=4.4e-08  Score=112.80  Aligned_cols=234  Identities=22%  Similarity=0.232  Sum_probs=151.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccchHH----HHHHHHHHHhc---------------cccCceeeeeeeeeccCeeEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTRMR----EFAAEIESLGR---------------LRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~~~----~f~~Ei~~L~~---------------l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ..++|.+.+.+-+|.++.+....-.....    ....++..+.+               .++|-+++..--+.-....+|
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            45667777788889999888765433221    11122222221               122334433222334567899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      +++|..+++|..-|+...  ..+.+........+..++.|||.   ..+.|||++|.|+|...++..++.|||.......
T Consensus       882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~  956 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL  956 (1205)
T ss_pred             hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCcccccccccc
Confidence            999999999999987654  34555555667778899999998   5689999999999999999999999984322110


Q ss_pred             ---------------------C----Cc-----ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 035655          501 ---------------------G----KI-----SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID  550 (670)
Q Consensus       501 ---------------------~----~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~  550 (670)
                                           .    ..     .......||+.|++||...+......+|.|+.|++++|.++|..||.
T Consensus       957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen  957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred             ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence                                 0    00     01223578999999999999999999999999999999999999998


Q ss_pred             CCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHH
Q 035655          551 SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMR  608 (670)
Q Consensus       551 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  608 (670)
                      ......+        .+.+....-+-.  .-+.+...+..+++..-+..+|.+|-.+.
T Consensus      1037 a~tpq~~--------f~ni~~~~~~~p--~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQQI--------FENILNRDIPWP--EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             Ccchhhh--------hhccccCCCCCC--CCccccChhhhhhhhhhhccCchhccCcc
Confidence            6432211        011111111111  11112223344555566678888886655

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.51  E-value=7.1e-07  Score=96.15  Aligned_cols=136  Identities=25%  Similarity=0.415  Sum_probs=109.7

Q ss_pred             HHHHHHhccccCceeeeeeeee----ccCeeEEEEeccCC-CCchhhcccC-------------CccccCHHHHHHHHHH
Q 035655          392 AEIESLGRLRHKHLVNLQGWCK----RKRDLLLVYDYIPN-GSLDSLLFDN-------------ENFVLSWEQRFNIIKG  453 (670)
Q Consensus       392 ~Ei~~L~~l~H~nIv~l~g~~~----~~~~~~lV~E~~~~-gsL~~~l~~~-------------~~~~l~~~~~~~i~~q  453 (670)
                      .-+++++++.|+|+|++..++.    .+..+++||+|.|+ ++|.++-...             .+...++..+|.++.|
T Consensus       322 ~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~Q  401 (655)
T KOG3741|consen  322 SLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQ  401 (655)
T ss_pred             HHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHH
Confidence            4578999999999999999886    34568999999986 6787765432             1234788999999999


Q ss_pred             HHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhH
Q 035655          454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVF  533 (670)
Q Consensus       454 ia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~  533 (670)
                      +..||.++|+   .|+..+-|.+.+||++.+.+++|+..|+......+..               |.+.+   -.+-|.=
T Consensus       402 LtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~---------------~~le~---~Qq~D~~  460 (655)
T KOG3741|consen  402 LTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT---------------EPLES---QQQNDLR  460 (655)
T ss_pred             HHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecCCCC---------------cchhH---HhhhhHH
Confidence            9999999999   8999999999999999999999999998876655431               11111   2467889


Q ss_pred             HHHHHHHHHHhCCCC
Q 035655          534 AYGVLLLEIATGRRP  548 (670)
Q Consensus       534 S~Gvvl~el~tG~~p  548 (670)
                      .||.+++.|.||..-
T Consensus       461 ~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  461 DLGLLLLALATGTEN  475 (655)
T ss_pred             HHHHHHHHHhhcccc
Confidence            999999999999654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.41  E-value=9.6e-06  Score=85.53  Aligned_cols=182  Identities=18%  Similarity=0.295  Sum_probs=120.7

Q ss_pred             cccceEeeeCceeEEEe-eccchH---------HHHHHHHHHHhcc-ccCceeeeeeee------ec-cCeeEEEEeccC
Q 035655          365 KQSEVIGTGGFGEVYKG-VLPTRM---------REFAAEIESLGRL-RHKHLVNLQGWC------KR-KRDLLLVYDYIP  426 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg-~~~~~~---------~~f~~Ei~~L~~l-~H~nIv~l~g~~------~~-~~~~~lV~E~~~  426 (670)
                      ...+.||+|+-+.+|-- ...+..         ..-.+.+..|... .||-+-.-+.|=      -+ +...-++|..++
T Consensus        14 ~~gr~LgqGgea~ly~l~e~~d~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~v~   93 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEVRDQVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPKVS   93 (637)
T ss_pred             CCCccccCCccceeeecchhhchhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecccCC
Confidence            34678999999998842 111111         1111233334333 355433323331      11 222566777766


Q ss_pred             CC-Cchhhccc----CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          427 NG-SLDSLLFD----NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       427 ~g-sL~~~l~~----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +. ...+++..    ..-....|...++.++.+|.+.+.||+   .|.+-+|+.++|+|+.+++.+.|.|=..-.....+
T Consensus        94 g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng  170 (637)
T COG4248          94 GKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANG  170 (637)
T ss_pred             CccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceeeccCC
Confidence            53 22233321    112347899999999999999999998   89999999999999999999999985544333222


Q ss_pred             CcceeeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhC-CCCCCC
Q 035655          502 KISHTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATG-RRPIDS  551 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG-~~pf~~  551 (670)
                        ....-.+|...|.+||...     +...+...|.|.+|+++++++.| ++||.+
T Consensus       171 --~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG  224 (637)
T COG4248         171 --TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG  224 (637)
T ss_pred             --ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence              2223347889999999754     33557889999999999999885 999976

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.39  E-value=1.4e-07  Score=105.04  Aligned_cols=154  Identities=19%  Similarity=0.269  Sum_probs=102.3

Q ss_pred             HHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc-c---e----eeccccCcCCCCcccc
Q 035655          450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-S---H----TTNVVGTIGYIAPELA  521 (670)
Q Consensus       450 i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~-~---~----~~~~~gt~~y~aPE~~  521 (670)
                      =+.+++.||.|+|.  ..++||++|.|++|.+++++..||+.|+.+........ .   .    ..-..-...|.|||++
T Consensus       104 nl~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~  181 (700)
T KOG2137|consen  104 NLGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL  181 (700)
T ss_pred             hhhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence            34556699999999  48999999999999999999999999998865443111 0   0    0111345689999999


Q ss_pred             ccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCC
Q 035655          522 RTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQK  600 (670)
Q Consensus       522 ~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~d  600 (670)
                      .....+.++|+||+|++++-+.. |+.-+......+... ..    ....+.--    ..+....+.++.+-+.+.+..+
T Consensus       182 ~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~~----~~~~~~~~----~~~s~~~p~el~~~l~k~l~~~  252 (700)
T KOG2137|consen  182 LGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-FS----RNLLNAGA----FGYSNNLPSELRESLKKLLNGD  252 (700)
T ss_pred             ccccccccccceeeeeEEEEEecCCcchhhccCCcchhh-hh----hccccccc----ccccccCcHHHHHHHHHHhcCC
Confidence            98778899999999999999985 444444322111110 00    00000000    1112233345555566678899


Q ss_pred             CCCCCCHHHHHHHh
Q 035655          601 AEARPTMRQVLRYL  614 (670)
Q Consensus       601 P~~RPs~~evl~~L  614 (670)
                      +..||++.++....
T Consensus       253 ~~~rp~~~~l~~~~  266 (700)
T KOG2137|consen  253 SAVRPTLDLLLSIP  266 (700)
T ss_pred             cccCcchhhhhccc
Confidence            99999888877643

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.28  E-value=1.9e-06  Score=85.61  Aligned_cols=108  Identities=25%  Similarity=0.323  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHhccccCc--eeeeeeeeecc----CeeEEEEeccCCC-CchhhcccCCccccCHHHHHHHHHHHHHHhh
Q 035655          387 MREFAAEIESLGRLRHKH--LVNLQGWCKRK----RDLLLVYDYIPNG-SLDSLLFDNENFVLSWEQRFNIIKGIAAGLL  459 (670)
Q Consensus       387 ~~~f~~Ei~~L~~l~H~n--Iv~l~g~~~~~----~~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~  459 (670)
                      .....+|...+.+|+...  ..+.+++.+..    ...++|+|++++. +|.+++.....  ++......++.+++..++
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence            446778988888886433  34555665543    2458999999984 89999865333  566778899999999999


Q ss_pred             hccccccceEEecccCCCcEEecCCC---cEEEEeecCceecc
Q 035655          460 YLHEEWEQVVIHRDVKSGNVLIDADM---NARLGDFGLARLFD  499 (670)
Q Consensus       460 yLH~~~~~~ivHrDIkp~NILld~~~---~~kL~DFGla~~~~  499 (670)
                      -||+   .+|+|+|+++.|||++.+.   .+.++||+-++...
T Consensus       133 ~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  133 KLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            9999   9999999999999999887   89999999877543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.26  E-value=3.5e-06  Score=82.82  Aligned_cols=110  Identities=16%  Similarity=0.148  Sum_probs=86.2

Q ss_pred             cchHHHHHHHHHHHhccccCc--eeeeeeeee-cc----CeeEEEEeccCC-CCchhhcccCCccccCHHHHHHHHHHHH
Q 035655          384 PTRMREFAAEIESLGRLRHKH--LVNLQGWCK-RK----RDLLLVYDYIPN-GSLDSLLFDNENFVLSWEQRFNIIKGIA  455 (670)
Q Consensus       384 ~~~~~~f~~Ei~~L~~l~H~n--Iv~l~g~~~-~~----~~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia  455 (670)
                      +-+...|.+|+..|.+|...+  +.+.. ++. ..    ...+||+|-+++ -+|.+++.+....+.+..++..++.+++
T Consensus        60 P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va  138 (216)
T PRK09902         60 PFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVA  138 (216)
T ss_pred             CCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHH
Confidence            346678999999999996433  44444 332 21    246899997754 6899998665444677888899999999


Q ss_pred             HHhhhccccccceEEecccCCCcEEecCCCc--EEEEeecCcee
Q 035655          456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMN--ARLGDFGLARL  497 (670)
Q Consensus       456 ~gL~yLH~~~~~~ivHrDIkp~NILld~~~~--~kL~DFGla~~  497 (670)
                      ..+.-||+   .++.|+|+-+.||+++.++.  ++++||.-++.
T Consensus       139 ~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        139 LAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            99999999   99999999999999986667  99999986653

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.22  E-value=2.9e-06  Score=82.63  Aligned_cols=101  Identities=25%  Similarity=0.312  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHhccccC--ceeeeeeeeeccCeeEEEEeccC--CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhc-c
Q 035655          388 REFAAEIESLGRLRHK--HLVNLQGWCKRKRDLLLVYDYIP--NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL-H  462 (670)
Q Consensus       388 ~~f~~Ei~~L~~l~H~--nIv~l~g~~~~~~~~~lV~E~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yL-H  462 (670)
                      ....+|.+.|.++..-  ++.+.+.+-    ..+|||||++  +..+.... ..   .++......++.+++..+..+ |
T Consensus        53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~-~~---~~~~~~~~~~~~~il~~~~~~~~  124 (188)
T PF01163_consen   53 EWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLK-DV---DLSPEEPKELLEEILEEIIKMLH  124 (188)
T ss_dssp             HHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHH-HC---GGGGSTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHH-hc---cccchhHHHHHHHHHHHHHHHHH
Confidence            4556899999999865  456666542    4579999998  55554432 21   122445567788888866664 6


Q ss_pred             ccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       463 ~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      .   .+++|+|+.+.||+++++ .+.|+|||.+....+
T Consensus       125 ~---~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~~  158 (188)
T PF01163_consen  125 K---AGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSSH  158 (188)
T ss_dssp             C---TTEEESS-STTSEEEETT-CEEE--GTTEEETTS
T ss_pred             h---cCceecCCChhhEEeecc-eEEEEecCcceecCC
Confidence            6   899999999999999988 999999999875543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.14  E-value=7.7e-05  Score=77.18  Aligned_cols=189  Identities=20%  Similarity=0.280  Sum_probs=117.7

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      ....|+|..+ .-.|+|++...++.|-+|-+..+.+             -.|..+-+|.|... ...++|||||--+...
T Consensus        56 W~~~GdAIas-~eqvRlaPSmrsrkGavWtka~~~f-------------e~weVev~~rVtGr-GRiGAdGlaiWYt~~~  120 (497)
T KOG3838|consen   56 WSHHGDAIAS-SEQVRLAPSMRSRKGAVWTKASVPF-------------ENWEVEVQFRVTGR-GRIGADGLAIWYTRGR  120 (497)
T ss_pred             eeecCccccc-ccceeeccccccccCceeecccCCc-------------ccceEEEEEEeccc-ccccCCceEEEEecCC
Confidence            5567899875 6679999999889999987766654             34788999999876 3578999999998644


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCC-cccccccccccccCCCcc-----cc
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNS-MKSIKLEPAAYYENGTKE-----DF  195 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns-~~s~~~~~~~~~~~~~~~-----~~  195 (670)
                      .    --|..+|-.+.=      | =+++=||.|.| .  +--|+.-|.+-.|. -++-....     .++..     -.
T Consensus       121 G----~~GpVfGg~d~W------n-GigiffDSfdn-D--~qknnP~Is~~lndGt~~ydh~~-----DGasQ~LssCqr  181 (497)
T KOG3838|consen  121 G----HVGPVFGGLDSW------N-GIGIFFDSFDN-D--GQKNNPAISVLLNDGTIPYDHPG-----DGASQGLSSCQR  181 (497)
T ss_pred             C----cccccccccccc------c-ceEEEeecccc-c--CCcCCccEEEEecCCcccccCCC-----ccHHHHHHHhhH
Confidence            2    122223321111      1 15888999877 2  22344455555542 11100000     11101     12


Q ss_pred             ccCC-CCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcc-cccccceeeEeecCCceeeeEEEe
Q 035655          196 TLES-GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSP-AFQETMYVGFSASTGRKVSSHFIL  273 (670)
Q Consensus       196 ~l~~-g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~-~l~~~~~vGFsastg~~~~~h~i~  273 (670)
                      ++.| --+.+|+|+|=.  .+|.|.+...=.          |..+ --.-++... +||..-|+|.||+||....-|+|+
T Consensus       182 DFRNkPyPvRarItY~~--nvLtv~innGmt----------p~d~-yE~C~rve~~~lp~nGyFGvSAATGgLADDHDVl  248 (497)
T KOG3838|consen  182 DFRNKPYPVRARITYYG--NVLTVMINNGMT----------PSDD-YEFCVRVENLLLPPNGYFGVSAATGGLADDHDVL  248 (497)
T ss_pred             HhccCCCCceEEEEEec--cEEEEEEcCCCC----------CCCC-cceeEeccceeccCCCeeeeeeccccccccccee
Confidence            3333 347899999964  688888864322          2211 111123333 468889999999999999999999


Q ss_pred             cccc
Q 035655          274 GWSF  277 (670)
Q Consensus       274 sW~f  277 (670)
                      ++.-
T Consensus       249 ~Flt  252 (497)
T KOG3838|consen  249 SFLT  252 (497)
T ss_pred             eeEE
Confidence            9753

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.14  E-value=8.1e-06  Score=82.23  Aligned_cols=122  Identities=23%  Similarity=0.285  Sum_probs=85.2

Q ss_pred             cccceEeeeCceeEEEeeccch-------------------------------------HHHHHHHHHHHhccccC--ce
Q 035655          365 KQSEVIGTGGFGEVYKGVLPTR-------------------------------------MREFAAEIESLGRLRHK--HL  405 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~~~-------------------------------------~~~f~~Ei~~L~~l~H~--nI  405 (670)
                      .+..+||-|.-+.||.|..+.+                                     .....+|.+.|++|.-.  .+
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            4567899999999999987641                                     12234799999999755  67


Q ss_pred             eeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       406 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                      .+.++|    +...+||||.++-.|...--       +-+..-.++..|++-+.-+-.   .++||+|+.+-||+++++|
T Consensus       174 P~P~~~----nRHaVvMe~ieG~eL~~~r~-------~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~dg  239 (304)
T COG0478         174 PKPIAW----NRHAVVMEYIEGVELYRLRL-------DVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTEDG  239 (304)
T ss_pred             CCcccc----ccceeeeehcccceeecccC-------cccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecCC
Confidence            777765    55789999999877755421       122222233333333322223   7999999999999999999


Q ss_pred             cEEEEeecCceeccC
Q 035655          486 NARLGDFGLARLFDH  500 (670)
Q Consensus       486 ~~kL~DFGla~~~~~  500 (670)
                      .+.++||-.+....+
T Consensus       240 ~~~vIDwPQ~v~~~h  254 (304)
T COG0478         240 DIVVIDWPQAVPISH  254 (304)
T ss_pred             CEEEEeCcccccCCC
Confidence            999999987754433

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.98  E-value=2.2e-05  Score=76.71  Aligned_cols=104  Identities=25%  Similarity=0.240  Sum_probs=83.9

Q ss_pred             HHHHHHhcccc-CceeeeeeeeeccCeeEEEEeccCCCCchhhccc-CCccccCHHHHHHHHHHHHHHhhhccccccceE
Q 035655          392 AEIESLGRLRH-KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV  469 (670)
Q Consensus       392 ~Ei~~L~~l~H-~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i  469 (670)
                      .|.-+|+.+++ +++.+++|.|-+    ++|.||...+++...-.. ..-...+|.+|.+|+.++++.+.+|++.....+
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~   83 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF   83 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence            58889999987 699999999943    679999987766432000 011246999999999999999999998665668


Q ss_pred             EecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          470 IHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       470 vHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      .-.|++++|+-+++++++|+.|...+....
T Consensus        84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             EEeecchHHeEEeCCCcEEEEechhcchhH
Confidence            999999999999999999999998775443

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.98  E-value=1.3e-06  Score=96.30  Aligned_cols=174  Identities=18%  Similarity=0.160  Sum_probs=129.6

Q ss_pred             ccceEeeeCceeEEEeeccch----------HHHHHHHHHHHhccccCc-eeeeeeeeeccCeeEEEEeccCCC-Cchhh
Q 035655          366 QSEVIGTGGFGEVYKGVLPTR----------MREFAAEIESLGRLRHKH-LVNLQGWCKRKRDLLLVYDYIPNG-SLDSL  433 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~~----------~~~f~~Ei~~L~~l~H~n-Iv~l~g~~~~~~~~~lV~E~~~~g-sL~~~  433 (670)
                      .-+-+++++++++||.+....          .....-++++|.+++||| .++.++-+..+....++++++..+ +-..-
T Consensus       246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~  325 (829)
T KOG0576|consen  246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALE  325 (829)
T ss_pred             HHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcccccc
Confidence            335568899999999875432          123345889999999999 777777777888899999999877 22222


Q ss_pred             cccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCc
Q 035655          434 LFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI  513 (670)
Q Consensus       434 l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~  513 (670)
                      ... ....+...+...++..-+++++|+|+   -.=+|||    ||+..+ ...|.+||+....+....  ......+|+
T Consensus       326 ~~~-se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~t~~~~~  394 (829)
T KOG0576|consen  326 MTV-SEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPRTAIGTP  394 (829)
T ss_pred             CCh-hhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCccc--ccccCCCCC
Confidence            211 11234445556677788899999998   3347888    777655 789999999987665543  345568999


Q ss_pred             CCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 035655          514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID  550 (670)
Q Consensus       514 ~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~  550 (670)
                      .++|||+.....+..+-|+|+.|.-..++.-|..|-.
T Consensus       395 ~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  395 EPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             CCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence            9999999999999999999999987778877777643

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.80  E-value=0.00014  Score=73.28  Aligned_cols=122  Identities=18%  Similarity=0.199  Sum_probs=76.4

Q ss_pred             ceEeeeCceeEEEeeccc----------hHHHHHHHHHHHhccccCce--eeeeeeeeccCeeEEEEeccCCCC-chhhc
Q 035655          368 EVIGTGGFGEVYKGVLPT----------RMREFAAEIESLGRLRHKHL--VNLQGWCKRKRDLLLVYDYIPNGS-LDSLL  434 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~----------~~~~f~~Ei~~L~~l~H~nI--v~l~g~~~~~~~~~lV~E~~~~gs-L~~~l  434 (670)
                      ..||+|..+.||+....+          ......+|.++++.+..-.+  .+.++++...+...+|||+++|.. +...+
T Consensus         7 ~~i~~G~t~~~y~~~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~   86 (226)
T TIGR02172         7 TQTGEGGNGESYTHKTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRII   86 (226)
T ss_pred             eeecCCCCcceeEecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhhhh
Confidence            568899999988842111          23457899999999875444  677788777777889999999863 22111


Q ss_pred             ccCCccccCHHHHHHHHHHHHHHhh---------------------------------------hccc-cccceEEeccc
Q 035655          435 FDNENFVLSWEQRFNIIKGIAAGLL---------------------------------------YLHE-EWEQVVIHRDV  474 (670)
Q Consensus       435 ~~~~~~~l~~~~~~~i~~qia~gL~---------------------------------------yLH~-~~~~~ivHrDI  474 (670)
                      ..      +......++.++++.+.                                       +|.. .....++|+|+
T Consensus        87 ~~------~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~  160 (226)
T TIGR02172        87 SD------NPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF  160 (226)
T ss_pred             cC------CHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence            10      00001111111111111                                       1111 11346799999


Q ss_pred             CCCcEEecCCCcEEEEeecCce
Q 035655          475 KSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       475 kp~NILld~~~~~kL~DFGla~  496 (670)
                      .|.||++++++ +.++||+.+.
T Consensus       161 ~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       161 QIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CCCcEEEcCCC-cEEEechhcC
Confidence            99999999888 9999999775

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.62  E-value=0.00027  Score=69.94  Aligned_cols=68  Identities=22%  Similarity=0.356  Sum_probs=54.0

Q ss_pred             CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCc
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA  495 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla  495 (670)
                      ...+++|||++|..|.++..      ++.    .++..+.+++.-||+   .|++|+|.+|.|++++++ .+++.||+..
T Consensus       116 ~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~-~i~iID~~~k  181 (229)
T PF06176_consen  116 SSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNN-GIRIIDTQGK  181 (229)
T ss_pred             eEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECC-cEEEEECccc
Confidence            45679999999988877641      222    255667788999998   999999999999999855 5999999876


Q ss_pred             ee
Q 035655          496 RL  497 (670)
Q Consensus       496 ~~  497 (670)
                      +.
T Consensus       182 ~~  183 (229)
T PF06176_consen  182 RM  183 (229)
T ss_pred             cc
Confidence            53

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.41  E-value=0.0011  Score=66.23  Aligned_cols=131  Identities=21%  Similarity=0.209  Sum_probs=74.3

Q ss_pred             cceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCc--eeeeeeeee---ccCeeEEEEeccCCCC
Q 035655          367 SEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKH--LVNLQGWCK---RKRDLLLVYDYIPNGS  429 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~n--Iv~l~g~~~---~~~~~~lV~E~~~~gs  429 (670)
                      .+.|+.|..+.||+....+            ....+..|..+++.|....  +.+++.++.   .....+++|+++++..
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~   81 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRP   81 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEE
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecccc
Confidence            4678888888888876533            2356778999999886443  456666443   2335799999999988


Q ss_pred             chh----------------hc---ccC--CccccCHHH---------HHHH------------HHHHHH-Hhhhccc---
Q 035655          430 LDS----------------LL---FDN--ENFVLSWEQ---------RFNI------------IKGIAA-GLLYLHE---  463 (670)
Q Consensus       430 L~~----------------~l---~~~--~~~~l~~~~---------~~~i------------~~qia~-gL~yLH~---  463 (670)
                      +..                .+   +..  ......+..         ....            ...+.. .+..+++   
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (239)
T PF01636_consen   82 LDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLP  161 (239)
T ss_dssp             HHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhc
Confidence            877                11   011  000111100         0000            111222 2233332   


Q ss_pred             -cccceEEecccCCCcEEec-CCCcEEEEeecCcee
Q 035655          464 -EWEQVVIHRDVKSGNVLID-ADMNARLGDFGLARL  497 (670)
Q Consensus       464 -~~~~~ivHrDIkp~NILld-~~~~~kL~DFGla~~  497 (670)
                       .....++|+|+.|.|||++ +++.+.|.||+.+..
T Consensus       162 ~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  162 KPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             CCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             cCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence             1347899999999999999 667778999987753

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.35  E-value=0.001  Score=67.64  Aligned_cols=109  Identities=18%  Similarity=0.175  Sum_probs=66.4

Q ss_pred             HHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEeccCCCCchhhcc-------------------cCC--ccccC--
Q 035655          388 REFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF-------------------DNE--NFVLS--  443 (670)
Q Consensus       388 ~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~-------------------~~~--~~~l~--  443 (670)
                      ....+|+++++.+. +--+.+++++....+..++|||+++|.+|.....                   ...  ...+.  
T Consensus        36 ~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~  115 (244)
T cd05150          36 YELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRR  115 (244)
T ss_pred             cchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchh
Confidence            45778999998885 3445677787776667899999999988765421                   000  00110  


Q ss_pred             HHHHHHH-----------------------HHHHHHHhhhcc-ccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          444 WEQRFNI-----------------------IKGIAAGLLYLH-EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       444 ~~~~~~i-----------------------~~qia~gL~yLH-~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      .......                       ..++..-|.... ......++|+|+.|.|||++++..+.|+||+.+.
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         116 LDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             HHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            0011100                       011111111100 0123679999999999999998778999998774

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.31  E-value=0.00038  Score=77.96  Aligned_cols=102  Identities=18%  Similarity=0.224  Sum_probs=64.3

Q ss_pred             HHHHHHhccc----cCceeeeeeee-eccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHh-hhccccc
Q 035655          392 AEIESLGRLR----HKHLVNLQGWC-KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL-LYLHEEW  465 (670)
Q Consensus       392 ~Ei~~L~~l~----H~nIv~l~g~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL-~yLH~~~  465 (670)
                      .|...+.+++    ...-+++=.++ +-.+...|+|||++|-.+.+...-.. ...+-+   .++..++++. ..+=   
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k---~ia~~~~~~f~~q~~---  282 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRK---ELAELLVRAFLRQLL---  282 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHH---HHHHHHHHHHHHHHH---
Confidence            5555555553    22222232333 33567899999999999988842222 223322   2333222221 1111   


Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ..++.|.|.+|.||+++.++++-+.|||+......
T Consensus       283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         283 RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             hcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            26899999999999999999999999999977654

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.16  E-value=0.0019  Score=65.33  Aligned_cols=31  Identities=29%  Similarity=0.434  Sum_probs=26.3

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ...++|+|+.+.||+++++...-|.||+.+.
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            3569999999999999876656799999874

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.13  E-value=0.00087  Score=79.32  Aligned_cols=195  Identities=19%  Similarity=0.202  Sum_probs=132.8

Q ss_pred             HHHHHHhccccCceeeeeeeeeccCe----eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccc
Q 035655          392 AEIESLGRLRHKHLVNLQGWCKRKRD----LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ  467 (670)
Q Consensus       392 ~Ei~~L~~l~H~nIv~l~g~~~~~~~----~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~  467 (670)
                      -|+..+.++.|+|++.+..|-.+...    ..+..|++..-++...+...  ...+..+.+.+..+..+||.|+|+   .
T Consensus       231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~---~  305 (1351)
T KOG1035|consen  231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHS---L  305 (1351)
T ss_pred             HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHH---h
Confidence            57778889999999999998765432    34556788888887777543  357888999999999999999998   5


Q ss_pred             eEEecccCCC---cEEecCCCcEEEE--eecCceeccCCCcceeeccccCcCCCCccccccCCCC--ccchhHHHHHHHH
Q 035655          468 VVIHRDVKSG---NVLIDADMNARLG--DFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS--CSTDVFAYGVLLL  540 (670)
Q Consensus       468 ~ivHrDIkp~---NILld~~~~~kL~--DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t--~ksDV~S~Gvvl~  540 (670)
                      ...|.-+..+   +-..+.++...++  ||+..+.........  ...-+..|-+||......+.  ...|+|.+|....
T Consensus       306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~--~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~  383 (1351)
T KOG1035|consen  306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF--SDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLL  383 (1351)
T ss_pred             ccceeEEecccccccccCccceeecchhhhcccccCCCcccch--hhcCccccccccccccccchhhhhhHHHHHHHHHh
Confidence            5555544444   4445666677777  888876554433221  12334567788877665544  4579999999999


Q ss_pred             HHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          541 EIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       541 el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .+..|..+-....              .....++.    ...    ....+....|+..++++|++..+++.+.-
T Consensus       384 ~~~~~~~i~~~~~--------------~~~~~l~~----~~~----~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f  436 (1351)
T KOG1035|consen  384 QLSQGEDISEKSA--------------VPVSLLDV----LST----SELLDALPKCLDEDSEERLSALELLTHPF  436 (1351)
T ss_pred             hhhhcCccccccc--------------chhhhhcc----ccc----hhhhhhhhhhcchhhhhccchhhhhhchh
Confidence            9999876633210              00000110    010    13456777899999999999999998753

>PLN02876 acyl-CoA dehydrogenase

Probab=97.11  E-value=0.0032  Score=75.62  Aligned_cols=44  Identities=14%  Similarity=0.281  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHhccc-cCce--eeeeeeeecc---CeeEEEEeccCCCCch
Q 035655          388 REFAAEIESLGRLR-HKHL--VNLQGWCKRK---RDLLLVYDYIPNGSLD  431 (670)
Q Consensus       388 ~~f~~Ei~~L~~l~-H~nI--v~l~g~~~~~---~~~~lV~E~~~~gsL~  431 (670)
                      ..+.+|+++|+.|. |.++  .+++.+|.+.   +..++||||+++..+.
T Consensus        83 ~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~  132 (822)
T PLN02876         83 HAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFV  132 (822)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccC
Confidence            56889999999996 6665  7888888764   4678999999986543

>PRK10593 hypothetical protein; Provisional

Probab=96.97  E-value=0.0066  Score=63.86  Aligned_cols=66  Identities=12%  Similarity=0.076  Sum_probs=49.4

Q ss_pred             cccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhcccc---Cceeeeeeeeec---cCeeEEEEeccC
Q 035655          365 KQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRH---KHLVNLQGWCKR---KRDLLLVYDYIP  426 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H---~nIv~l~g~~~~---~~~~~lV~E~~~  426 (670)
                      ...+.||.|..+.||+-...+            ....|..|...|+.|..   -.+.+++++|..   .+..++|||+++
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~   96 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR   96 (297)
T ss_pred             heeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence            345678999999999843211            12478899999999853   367888888764   366899999999


Q ss_pred             CCCc
Q 035655          427 NGSL  430 (670)
Q Consensus       427 ~gsL  430 (670)
                      ++++
T Consensus        97 G~~~  100 (297)
T PRK10593         97 GVSV  100 (297)
T ss_pred             CEec
Confidence            8765

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.95  E-value=0.0016  Score=72.79  Aligned_cols=81  Identities=22%  Similarity=0.312  Sum_probs=54.2

Q ss_pred             cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC----CCcEEEE
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA----DMNARLG  490 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~----~~~~kL~  490 (670)
                      .....|+||||+|..+.+.-.-. +..++...+..-+.+.     |++.-...|++|+|-+|.||+++.    ++.+.+-
T Consensus       274 st~RVLtME~~~G~~i~Dl~~i~-~~gi~~~~i~~~l~~~-----~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivll  347 (538)
T KOG1235|consen  274 STKRVLTMEYVDGIKINDLDAID-KRGISPHDILNKLVEA-----YLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLL  347 (538)
T ss_pred             CcceEEEEEecCCccCCCHHHHH-HcCCCHHHHHHHHHHH-----HHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEE
Confidence            35689999999998887753211 1234444333332222     222222368999999999999984    6789999


Q ss_pred             eecCceeccCC
Q 035655          491 DFGLARLFDHG  501 (670)
Q Consensus       491 DFGla~~~~~~  501 (670)
                      |||+.....+.
T Consensus       348 DhGl~~~is~~  358 (538)
T KOG1235|consen  348 DHGLYAVISHK  358 (538)
T ss_pred             cccccccccHH
Confidence            99998866543

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.93  E-value=0.0061  Score=59.98  Aligned_cols=116  Identities=22%  Similarity=0.355  Sum_probs=80.5

Q ss_pred             ccceEeeeCceeEEEee----------ccc-------------------hHHHHHHHHHHHhccc------cCceeeeee
Q 035655          366 QSEVIGTGGFGEVYKGV----------LPT-------------------RMREFAAEIESLGRLR------HKHLVNLQG  410 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~----------~~~-------------------~~~~f~~Ei~~L~~l~------H~nIv~l~g  410 (670)
                      ....||+|+.-.||.--          .+.                   ..+++.+|+.....+.      +.+|.+++|
T Consensus         5 ~~~~i~~G~~R~cy~HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQHPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             CCcccccCCCceEEECCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            35678888888888521          111                   2467778887777766      789999999


Q ss_pred             eeeccCeeEEEEeccCC------CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC
Q 035655          411 WCKRKRDLLLVYDYIPN------GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD  484 (670)
Q Consensus       411 ~~~~~~~~~lV~E~~~~------gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~  484 (670)
                      +.+++...-+|+|...+      -+|.+++.+.   .++. ...+.+.+.   ..||-+   ..|+.+|++|.||++...
T Consensus        85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~~L~~f---~~~l~~---~~Iv~~dl~~~NIv~~~~  154 (199)
T PF10707_consen   85 FVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQALDEF---KRYLLD---HHIVIRDLNPHNIVVQRR  154 (199)
T ss_pred             EEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHHHHHHH---HHHHHH---cCCeecCCCcccEEEEec
Confidence            99999999999998754      2577777433   3444 333333333   455555   789999999999999543


Q ss_pred             C----cEEEEe
Q 035655          485 M----NARLGD  491 (670)
Q Consensus       485 ~----~~kL~D  491 (670)
                      .    .+.|+|
T Consensus       155 ~~~~~~lvlID  165 (199)
T PF10707_consen  155 DSGEFRLVLID  165 (199)
T ss_pred             CCCceEEEEEe
Confidence            2    466766

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.92  E-value=0.0075  Score=60.61  Aligned_cols=99  Identities=22%  Similarity=0.285  Sum_probs=64.3

Q ss_pred             HHHHHHhcccc--CceeeeeeeeeccCeeEEEEeccCCCCc-hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce
Q 035655          392 AEIESLGRLRH--KHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV  468 (670)
Q Consensus       392 ~Ei~~L~~l~H--~nIv~l~g~~~~~~~~~lV~E~~~~gsL-~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~  468 (670)
                      +|+.-|+++..  -.+.+-+++.    .-.|||||+....+ .=.|.+   -.+...+...+..++++.+.-|-.  ..+
T Consensus       117 kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~--~a~  187 (268)
T COG1718         117 KEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYK--EAG  187 (268)
T ss_pred             HHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHH--hcC
Confidence            57777777743  2333333332    34799999965311 111111   123333566667777777766654  378


Q ss_pred             EEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       469 ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      +||+||..-|||+. ++.+.|+|+|.|....+
T Consensus       188 LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~h  218 (268)
T COG1718         188 LVHGDLSEYNILVH-DGEPYIIDVSQAVTIDH  218 (268)
T ss_pred             cccccchhhheEEE-CCeEEEEECccccccCC
Confidence            99999999999999 88999999999876554

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.81  E-value=0.00017  Score=86.75  Aligned_cols=161  Identities=14%  Similarity=0.042  Sum_probs=119.5

Q ss_pred             HHHHHHHHHhccccCceeeeeeeee--ccCeeEEEEeccCCCCchhhcccCCc--cccCHHHHHHHHHHHHHHhhhcccc
Q 035655          389 EFAAEIESLGRLRHKHLVNLQGWCK--RKRDLLLVYDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIKGIAAGLLYLHEE  464 (670)
Q Consensus       389 ~f~~Ei~~L~~l~H~nIv~l~g~~~--~~~~~~lV~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qia~gL~yLH~~  464 (670)
                      ....|...++...|+++.....-..  +..+.+.+++|+..|.+.+.|-+...  ..+...-+....++...+..-+|+.
T Consensus      1275 mll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1275 MLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred             hhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhc
Confidence            3445666677778999887655443  34567899999999999999876432  3344444444555546666665552


Q ss_pred             --ccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHH
Q 035655          465 --WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI  542 (670)
Q Consensus       465 --~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el  542 (670)
                        .....+|+++|+-|.+|..+.++|++++|+.+...+. ........+++.|+.|+....-.++.++|+|..|+-+++.
T Consensus      1355 tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~-~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV-LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred             ccCCccchhhhhhhhccceecCCcccccccccccccCch-HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence              2345799999999999999999999999999844432 2233445778899999998888899999999999999999


Q ss_pred             HhCCCCCC
Q 035655          543 ATGRRPID  550 (670)
Q Consensus       543 ~tG~~pf~  550 (670)
                      ..|..+|-
T Consensus      1434 s~~n~~fi 1441 (2724)
T KOG1826|consen 1434 SDGNAYFI 1441 (2724)
T ss_pred             hcccHHHH
Confidence            88887763

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=95.96  E-value=0.033  Score=54.70  Aligned_cols=111  Identities=27%  Similarity=0.411  Sum_probs=80.7

Q ss_pred             cCccccceEeeeCc-eeEEEeeccc-----------------------------------hHHHHHHHHHHHhccc---c
Q 035655          362 KGFKQSEVIGTGGF-GEVYKGVLPT-----------------------------------RMREFAAEIESLGRLR---H  402 (670)
Q Consensus       362 ~~f~~~~~lG~G~f-g~Vykg~~~~-----------------------------------~~~~f~~Ei~~L~~l~---H  402 (670)
                      .+++..+.||.|.- |.|||....+                                   ...-|..|.+...+|+   +
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            78888999999999 9999986533                                   1134778999888885   4


Q ss_pred             Cce--eeeeeeeecc------------------CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcc
Q 035655          403 KHL--VNLQGWCKRK------------------RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH  462 (670)
Q Consensus       403 ~nI--v~l~g~~~~~------------------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH  462 (670)
                      .++  |+++||..-.                  ....||.||.+...           .+.    .+-+.+|.+-|.-+|
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~----~~~~~~~~~dl~~~~  181 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQ----IRDIPQMLRDLKILH  181 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccc----hhHHHHHHHHHHHHH
Confidence            466  9999997322                  12366777765422           122    234566777778899


Q ss_pred             ccccceEEecccCCCcEEecCCCcEEEEeecCc
Q 035655          463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA  495 (670)
Q Consensus       463 ~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla  495 (670)
                      .   .+|+-+|+|+.|..     ..||+|||.+
T Consensus       182 k---~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  182 K---LGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             H---CCeeeccCcccccc-----CCEEEecccC
Confidence            8   99999999999976     4689999854

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=95.91  E-value=0.021  Score=54.47  Aligned_cols=118  Identities=15%  Similarity=0.198  Sum_probs=78.3

Q ss_pred             ccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCcee-eeeeeeeccCeeEEEEeccCCCCc
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHLV-NLQGWCKRKRDLLLVYDYIPNGSL  430 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nIv-~l~g~~~~~~~~~lV~E~~~~gsL  430 (670)
                      ....+.|++|.+|.||+|.+..            ....+..|+++|..+.-.++- +++.+..    -++.|||..|-.|
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~L   99 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRPL   99 (201)
T ss_pred             hhhhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcch
Confidence            3456789999999999987753            456788999999999866554 3444433    2445999998888


Q ss_pred             hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccC-CCcEEecCCCcEEEEeecCcee
Q 035655          431 DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK-SGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       431 ~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIk-p~NILld~~~~~kL~DFGla~~  497 (670)
                      .+.-...     +-    +-...+++. +|.-+  ..+|-|..|. |...+|-.+..+.|+||.-|..
T Consensus       100 ~~~~~~~-----~r----k~l~~vlE~-a~~LD--~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112         100 GKLEIGG-----DR----KHLLRVLEK-AYKLD--RLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             hhhhhcc-----cH----HHHHHHHHH-HHHHH--HhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            7764321     11    233344444 33333  2678888876 4444444455999999998863

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=95.80  E-value=0.043  Score=55.27  Aligned_cols=31  Identities=26%  Similarity=0.438  Sum_probs=27.3

Q ss_pred             cceEEecccCCCcEEecC-CCcEEEEeecCce
Q 035655          466 EQVVIHRDVKSGNVLIDA-DMNARLGDFGLAR  496 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~-~~~~kL~DFGla~  496 (670)
                      ...++|+|+.+.|||+++ +..+.++||..|.
T Consensus       169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             CEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            367999999999999998 5789999998775

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=95.75  E-value=0.027  Score=58.91  Aligned_cols=111  Identities=18%  Similarity=0.135  Sum_probs=64.0

Q ss_pred             hHHHHHHHHHHHhccccCc--eeeeeeee------eccCeeEEEEeccCCCCchh----hc----------cc---C-C-
Q 035655          386 RMREFAAEIESLGRLRHKH--LVNLQGWC------KRKRDLLLVYDYIPNGSLDS----LL----------FD---N-E-  438 (670)
Q Consensus       386 ~~~~f~~Ei~~L~~l~H~n--Iv~l~g~~------~~~~~~~lV~E~~~~gsL~~----~l----------~~---~-~-  438 (670)
                      .......|++++..|.+.+  +.+++...      ...+..++|++|++|..+..    .+          +.   . . 
T Consensus        49 ~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~  128 (296)
T cd05153          49 SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPG  128 (296)
T ss_pred             ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCc
Confidence            3456678888888886433  34443321      22345689999999877643    11          10   0 0 


Q ss_pred             ----ccccCHHHHHH----------HHHHHHHHhhhccc----cccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          439 ----NFVLSWEQRFN----------IIKGIAAGLLYLHE----EWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       439 ----~~~l~~~~~~~----------i~~qia~gL~yLH~----~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                          .....|.....          ....+...+.++.+    ....+++|+|+.|.||+++++..+.|.||+.+.
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         129 ERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             cCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence                01122222110          11112223333332    123579999999999999998777999998774

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.66  E-value=0.012  Score=64.38  Aligned_cols=50  Identities=18%  Similarity=0.315  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHhccccCceeeeeeeeeccC-eeEEEEeccCCCCchhhcccC
Q 035655          387 MREFAAEIESLGRLRHKHLVNLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDN  437 (670)
Q Consensus       387 ~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-~~~lV~E~~~~gsL~~~l~~~  437 (670)
                      ..+..-...+++.+.|+|+..++.+..... ...+|+|++ +.||++++..+
T Consensus        26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~   76 (725)
T KOG1093|consen   26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTG   76 (725)
T ss_pred             HHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhc
Confidence            456667788999999999999999887654 467788887 77999988544

>TIGR02721 ycfN_thiK thiamine kinase

Probab=95.50  E-value=0.07  Score=54.64  Aligned_cols=30  Identities=23%  Similarity=0.313  Sum_probs=26.3

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ...++|+|+.|.||++++++ ++|+||..+.
T Consensus       145 ~~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       145 PLAPLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             CCeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            35789999999999999877 7899998875

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=95.11  E-value=0.063  Score=56.78  Aligned_cols=105  Identities=21%  Similarity=0.213  Sum_probs=72.3

Q ss_pred             ccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       414 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      +....|++|++. +++|...      ..-.|++...++.+.+.-+.-+..  +-..=|||+.-.||||+ +|++.|+||-
T Consensus       297 e~~y~yl~~kdh-gt~is~i------k~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfk  366 (488)
T COG5072         297 ETLYLYLHFKDH-GTPISII------KADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFK  366 (488)
T ss_pred             CceEEEEEEecC-Cceeeee------ecccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEee
Confidence            344567777775 5555332      235789999999999998888887  46678999999999999 9999999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHH
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY  535 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~  535 (670)
                      +++........ .     -...--|-.+. |.-+.+=|||-+
T Consensus       367 lsRl~~~q~~i-s-----y~rldhp~lF~-G~dd~QFeIYrl  401 (488)
T COG5072         367 LSRLSYSQGII-S-----YNRLDHPDLFN-GVDDYQFEIYRL  401 (488)
T ss_pred             eeecccCCcee-e-----ccccCchhhhc-CccceeeeHHHH
Confidence            99854332211 1     11122344444 444667788864

>PRK05231 homoserine kinase; Provisional

Probab=94.92  E-value=0.16  Score=53.84  Aligned_cols=31  Identities=35%  Similarity=0.394  Sum_probs=26.7

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..+++|+|+++.||+++.+...-|+||+.+.
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            4689999999999999976556899999874

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=94.84  E-value=0.047  Score=56.89  Aligned_cols=134  Identities=17%  Similarity=0.170  Sum_probs=85.7

Q ss_pred             cchhhHHHhhcC---ccccceEeeeCceeEEEeeccchH--------------------H-----------------HHH
Q 035655          352 FRYSDLYTATKG---FKQSEVIGTGGFGEVYKGVLPTRM--------------------R-----------------EFA  391 (670)
Q Consensus       352 ~~~~~l~~~t~~---f~~~~~lG~G~fg~Vykg~~~~~~--------------------~-----------------~f~  391 (670)
                      ++|-.|.+-.++   +..++.||-|.-+-+|.+....+.                    +                 ...
T Consensus        79 yDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~  158 (465)
T KOG2268|consen   79 YDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAAT  158 (465)
T ss_pred             chHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHH
Confidence            344444443332   567899999999999998765310                    1                 122


Q ss_pred             HHHHHHhcccc--CceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceE
Q 035655          392 AEIESLGRLRH--KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV  469 (670)
Q Consensus       392 ~Ei~~L~~l~H--~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i  469 (670)
                      +|+..|+.|..  --+.+.+++    +..++|||++.+-.|...-+     ..+..+++.-+.+++   .-|-.   .|+
T Consensus       159 kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~-----v~d~~~ly~~lm~~I---v~la~---~Gl  223 (465)
T KOG2268|consen  159 KEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRH-----VEDPPTLYDDLMGLI---VRLAN---HGL  223 (465)
T ss_pred             HHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeee-----cCChHHHHHHHHHHH---HHHHH---cCc
Confidence            57777777743  223334443    45789999999888866532     122333333322222   22333   899


Q ss_pred             EecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          470 IHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       470 vHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||+|..-=||+++++..++++||-......+
T Consensus       224 IHgDFNEFNimv~dd~~i~vIDFPQmvS~sh  254 (465)
T KOG2268|consen  224 IHGDFNEFNIMVKDDDKIVVIDFPQMVSTSH  254 (465)
T ss_pred             eecccchheeEEecCCCEEEeechHhhccCC
Confidence            9999999999999999999999976654433

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.80  E-value=0.24  Score=52.20  Aligned_cols=31  Identities=39%  Similarity=0.415  Sum_probs=27.7

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..+++|+|+++.||++++++...|.||+.+.
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            4789999999999999988777899999774

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=94.37  E-value=0.2  Score=54.75  Aligned_cols=30  Identities=17%  Similarity=0.459  Sum_probs=25.9

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ...++|+|+.+.|||+..+ .++++||.++.
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a~  251 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFAF  251 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEeccccc
Confidence            3679999999999999776 69999998765

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=94.30  E-value=0.32  Score=51.41  Aligned_cols=107  Identities=21%  Similarity=0.246  Sum_probs=70.6

Q ss_pred             hHHHHHHHHHHHhcccc--CceeeeeeeeeccC--eeEEEEeccCCCCchhhcccCCccccCHHHHHHHH-HHHHHHhhh
Q 035655          386 RMREFAAEIESLGRLRH--KHLVNLQGWCKRKR--DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII-KGIAAGLLY  460 (670)
Q Consensus       386 ~~~~f~~Ei~~L~~l~H--~nIv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~-~qia~gL~y  460 (670)
                      ......+|..+|+.+.-  --..+.++.|.++.  ..+.||+|.+|..+.+.+.....   .    .+.+ ..+++.|+-
T Consensus        64 ~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~---~----~~~~~~~l~~~La~  136 (321)
T COG3173          64 SAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESL---G----RQFALDALADFLAE  136 (321)
T ss_pred             hhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccc---h----HHHHHHHHHHHHHH
Confidence            34556688888887743  33455677787665  77999999988655444322111   0    1111 244444444


Q ss_pred             ccc-------------------------------------------------------cccceEEecccCCCcEEecCCC
Q 035655          461 LHE-------------------------------------------------------EWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       461 LH~-------------------------------------------------------~~~~~ivHrDIkp~NILld~~~  485 (670)
                      ||+                                                       .....++|+|+++.|++++.+.
T Consensus       137 LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~  216 (321)
T COG3173         137 LHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGR  216 (321)
T ss_pred             HhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCC
Confidence            442                                                       1136799999999999999999


Q ss_pred             cEEEEeecCceecc
Q 035655          486 NARLGDFGLARLFD  499 (670)
Q Consensus       486 ~~kL~DFGla~~~~  499 (670)
                      .+-+.||+++..-+
T Consensus       217 ~~gVlDwe~~~lGD  230 (321)
T COG3173         217 PTGVLDWELATLGD  230 (321)
T ss_pred             eeEEEeccccccCC
Confidence            99999999987543

>PLN02236 choline kinase

Probab=93.31  E-value=0.24  Score=53.18  Aligned_cols=31  Identities=29%  Similarity=0.445  Sum_probs=27.0

Q ss_pred             cceEEecccCCCcEEecC-CCcEEEEeecCce
Q 035655          466 EQVVIHRDVKSGNVLIDA-DMNARLGDFGLAR  496 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~-~~~~kL~DFGla~  496 (670)
                      ...++|+|+++.|||+++ ++.++++||..+.
T Consensus       199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            357899999999999986 4689999998875

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=92.85  E-value=0.56  Score=48.76  Aligned_cols=31  Identities=35%  Similarity=0.636  Sum_probs=26.0

Q ss_pred             ceEEecccCCCcEEecCCCc-EEEEeecCcee
Q 035655          467 QVVIHRDVKSGNVLIDADMN-ARLGDFGLARL  497 (670)
Q Consensus       467 ~~ivHrDIkp~NILld~~~~-~kL~DFGla~~  497 (670)
                      ..++|+|+++.||+++++++ .-|.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            56899999999999997555 56999998753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=91.97  E-value=0.47  Score=49.55  Aligned_cols=129  Identities=26%  Similarity=0.338  Sum_probs=63.6

Q ss_pred             cccceEeeeCceeEEEeecc-----------chHHHHHHHHHHHhccc---cCceeeeeeeeeccCeeEEEEeccCCC--
Q 035655          365 KQSEVIGTGGFGEVYKGVLP-----------TRMREFAAEIESLGRLR---HKHLVNLQGWCKRKRDLLLVYDYIPNG--  428 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~-----------~~~~~f~~Ei~~L~~l~---H~nIv~l~g~~~~~~~~~lV~E~~~~g--  428 (670)
                      +..+.++.|....+|+....           .....|..|.+-|+.|.   --.+.+++++....+..+||+||++.+  
T Consensus        20 ~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~~~   99 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMGSP   99 (288)
T ss_dssp             -EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-------
T ss_pred             eeeEecCCCChhheEEEECCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCCCC
Confidence            34566777777777765432           23457899999999884   345778899888777789999999876  


Q ss_pred             Cchhh---------ccc-CCc-------------------cccCHHH-----HHHHHH--------------HHHHHh-h
Q 035655          429 SLDSL---------LFD-NEN-------------------FVLSWEQ-----RFNIIK--------------GIAAGL-L  459 (670)
Q Consensus       429 sL~~~---------l~~-~~~-------------------~~l~~~~-----~~~i~~--------------qia~gL-~  459 (670)
                      +..+.         |++ ...                   ..-+|..     |+.-..              ++.+.+ .
T Consensus       100 ~~~~~~~lg~~LA~LH~~~~~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~~~~~~~~~~~~~~l~~~~~~  179 (288)
T PF03881_consen  100 SPPDWEELGRQLAALHQWSPAGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLELAREKGGLDAELERLVERLPS  179 (288)
T ss_dssp             -CCHHHHHHHHHHHHHH-T--SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHHHHHCTSS-CHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHhhhcCCCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHH
Confidence            11110         122 110                   0123322     111111              111111 2


Q ss_pred             hccc-cccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          460 YLHE-EWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       460 yLH~-~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      .|+. ..++.++|+||-+.|++.+.++.+.|.|=.
T Consensus       180 ~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa  214 (288)
T PF03881_consen  180 LLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPA  214 (288)
T ss_dssp             CCTTS----EEE-SS-SGGGEEEETTE-EEE-S--
T ss_pred             HhcCCCCCceeeEcCccccceeecCCCCceeeccc
Confidence            2231 225789999999999999999889988865

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=90.29  E-value=0.81  Score=45.48  Aligned_cols=143  Identities=15%  Similarity=0.165  Sum_probs=87.4

Q ss_pred             EeeeCceeEEEeeccc-----hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCH
Q 035655          370 IGTGGFGEVYKGVLPT-----RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSW  444 (670)
Q Consensus       370 lG~G~fg~Vykg~~~~-----~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~  444 (670)
                      +|+...|..+.-+.+.     ...-|..+.+++.+++  .|++|..-  .....-++.|+|..-           .... 
T Consensus        80 ~~kt~iG~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~-----------~i~~-  143 (308)
T PF07387_consen   80 IGKTKIGPLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKI-----------KINF-  143 (308)
T ss_pred             EeccccchhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCc-----------ccch-
Confidence            4444455555433332     3455778888888773  56666632  334567888887321           0111 


Q ss_pred             HHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccC
Q 035655          445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG  524 (670)
Q Consensus       445 ~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  524 (670)
                         ..++.-=+.+|.-.|++ ..+.+|+|-.|+||+-|..|.+||.|-+...  .+           +..|.--|   ..
T Consensus       144 ---~N~i~agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll--~~-----------~V~~vN~~---Y~  203 (308)
T PF07387_consen  144 ---SNFITAGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLL--EN-----------QVNMVNIE---YE  203 (308)
T ss_pred             ---hHHHHHhHHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhh--hh-----------eeeEEeee---cc
Confidence               11222224667788864 4789999999999999999999999976532  11           11122211   12


Q ss_pred             CCCccchhHHHHHHHHHHHhCCCC
Q 035655          525 KASCSTDVFAYGVLLLEIATGRRP  548 (670)
Q Consensus       525 ~~t~ksDV~S~Gvvl~el~tG~~p  548 (670)
                      ..|.++.+-+|=.-+++++...+.
T Consensus       204 ~lT~~aE~~~fv~s~l~~v~~~~~  227 (308)
T PF07387_consen  204 SLTQEAEVKVFVKSCLKLVEKQRS  227 (308)
T ss_pred             ccChHHHHHHHHHHHHHHHHHHhc
Confidence            346788888888888888775444

The function of this family is unknown.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=90.17  E-value=0.59  Score=49.01  Aligned_cols=32  Identities=31%  Similarity=0.373  Sum_probs=28.2

Q ss_pred             ccceEEecccCCCcEEecCC----CcEEEEeecCce
Q 035655          465 WEQVVIHRDVKSGNVLIDAD----MNARLGDFGLAR  496 (670)
Q Consensus       465 ~~~~ivHrDIkp~NILld~~----~~~kL~DFGla~  496 (670)
                      ....++|+|+.+.||+++++    +.++++||..+.
T Consensus       177 ~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         177 SPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             CCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            34789999999999999985    889999999875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=89.27  E-value=0.72  Score=45.63  Aligned_cols=49  Identities=27%  Similarity=0.323  Sum_probs=29.3

Q ss_pred             HHHHHHHHHHHhhhccccccceEEecccCCCcEEe-cCCCcEEEEeecCcee
Q 035655          447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI-DADMNARLGDFGLARL  497 (670)
Q Consensus       447 ~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl-d~~~~~kL~DFGla~~  497 (670)
                      ..+.+..+-+.+.-..+  ...++|+|+.+.|||+ +.++.++++||..|..
T Consensus       125 l~~~~~~~~~~l~~~~~--~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  125 LQEELEELEKLLEKSNS--PLVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             HHHHHHHHHHHHHTSCG--GEEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             HHHHHhhhhhhhhccCC--CceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            33334444444433333  3678999999999999 8899999999998863

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PLN02756 S-methyl-5-thioribose kinase

Probab=88.18  E-value=3.5  Score=45.17  Aligned_cols=30  Identities=27%  Similarity=0.472  Sum_probs=24.9

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ...++|+|+.+.||++++++ .++.|..++.
T Consensus       229 ~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~  258 (418)
T PLN02756        229 AQALVHGDLHTGSVMVTPDS-TQVIDPEFAF  258 (418)
T ss_pred             ccceeecCCCCCcEEEcCCC-ceEecchhhc
Confidence            46799999999999999875 8888876554

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=86.87  E-value=1.1  Score=47.75  Aligned_cols=28  Identities=39%  Similarity=0.589  Sum_probs=25.9

Q ss_pred             EEecccCCCcEEecCCCc-EEEEeecCce
Q 035655          469 VIHRDVKSGNVLIDADMN-ARLGDFGLAR  496 (670)
Q Consensus       469 ivHrDIkp~NILld~~~~-~kL~DFGla~  496 (670)
                      +||+|+.|.||+++.+.. +.+.||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            999999999999999885 8999999775

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	670
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-52
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		4e-51
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		7e-37
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-36
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		4e-33
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		7e-33
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-32
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-31
3ujo_A	281	Galactose-Specific Seed Lectin From Dolichos Lablab		2e-22
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-21
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-21
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-20
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-20
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-20
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-20
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-20
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-20
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-20
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-20
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-20
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		3e-20
1fat_A	252	Phytohemagglutinin-L Length = 252		3e-20
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		4e-20
1g8w_A	233	Improved Structure Of Phytohemagglutinin-L From The		6e-20
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		7e-20
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		9e-20
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-19
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-19
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-19
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-19
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-19
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-19
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-19
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		3e-19
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		4e-19
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		4e-19
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		6e-19
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		7e-19
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		7e-19
2pl0_A	289	Lck Bound To Imatinib Length = 289		8e-19
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		8e-19
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		8e-19
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		8e-19
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-18
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-18
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-18
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-18
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-18
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-18
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-18
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-18
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		8e-18
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		9e-18
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		9e-18
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-17
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-17
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-17
2bqp_A	234	The Structure Of The Pea Lectin-D-Glucopyranose Com		1e-17
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-17
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-17
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-17
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-17
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-17
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-17
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-17
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-17
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-17
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-17
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-17
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		4e-17
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-17
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		5e-17
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		5e-17
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		6e-17
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-17
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		6e-17
4h58_A	275	Braf In Complex With Compound 3 Length = 275		6e-17
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		7e-17
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		7e-17
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		7e-17
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		7e-17
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		8e-17
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-17
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		8e-17
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		8e-17
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		8e-17
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-16
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-16
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		1e-16
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-16
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-16
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-16
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-16
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-16
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-16
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-16
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-16
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-16
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-16
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-16
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-16
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-16
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-16
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-16
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-16
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-16
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-16
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-16
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		4e-16
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		4e-16
1avb_A	226	Arcelin-1 From Phaseolus Vulgaris L Length = 226		6e-16
3a7f_A	303	Human Mst3 Kinase Length = 303		6e-16
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		7e-16
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		7e-16
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		8e-16
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		8e-16
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		8e-16
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-15
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-15
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-15
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-15
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-15
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		3e-15
1bjq_A	253	The Dolichos Biflorus Seed Lectin In Complex With A		6e-15
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-15
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		7e-15
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		7e-15
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		8e-15
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		8e-15
1fay_A	238	Winged Bean Acidic Lectin Complexed With Methyl-Alp		8e-15
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		8e-15
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		8e-15
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		8e-15
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		8e-15
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		8e-15
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		8e-15
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		8e-15
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		9e-15
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		9e-15
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		9e-15
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-14
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-14
3usu_A	256	Crystal Structure Of Butea Monosperma Seed Lectin L		1e-14
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-14
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-14
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-14
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-14
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		1e-14
3usu_B	242	Crystal Structure Of Butea Monosperma Seed Lectin L		1e-14
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-14
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-14
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-14
1fny_A	237	Legume Lectin Of The Bark Of Robinia Pseudoacacia.		1e-14
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-14
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-14
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-14
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		1e-14
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-14
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-14
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-14
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-14
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		2e-14
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-14
1lul_A	253	Db58, A Legume Lectin From Dolichos Biflorus Length		2e-14
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-14
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-14
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-14
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-14
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-14
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-14
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-14
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-14
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-14
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-14
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-14
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-14
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-14
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		3e-14
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-14
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-14
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-14
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-14
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		3e-14
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		3e-14
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-14
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-14
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		3e-14
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		4e-14
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		4e-14
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-14
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		4e-14
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		5e-14
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		5e-14
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		5e-14
2e7q_A	237	Crystal Structure Of Basic Winged Bean Lectin In Co		6e-14
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		6e-14
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-14
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-14
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-14
1wbf_A	242	Winged Bean Lectin, Saccharide Free Form Length = 2		8e-14
2sba_A	253	Soybean Agglutinin Complexed With 2,6-Pentasacchari		8e-14
1wbl_A	241	Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga		8e-14
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		9e-14
1fvr_A	327	Tie2 Kinase Domain Length = 327		9e-14
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		9e-14
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-13
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-13
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-13
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-13
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-13
3ipv_A	251	Crystal Structure Of Spatholobus Parviflorus Seed L		1e-13
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-13
1lgb_A	181	Interaction Of A Legume Lectin With The N2 Fragment		1e-13
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		2e-13
1loa_A	181	Three-Dimensional Structures Of Complexes Of Lathyr		2e-13
1lof_C	181	X-Ray Structure Of A Biantennary Octasaccharide-Lec		2e-13
1lgc_A	181	Interaction Of A Legume Lectin With The N2 Fragment		2e-13
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-13
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-13
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-13
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		3e-13
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-13
1hql_A	257	The Xenograft Antigen In Complex With The B4 Isolec		3e-13
1gnz_A	257	Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m		3e-13
3ipv_B	239	Crystal Structure Of Spatholobus Parviflorus Seed L		3e-13
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		3e-13
1gz9_A	239	High-Resolution Crystal Structure Of Erythrina Cris		3e-13
1rin_A	180	X-Ray Crystal Structure Of A Pea Lectin-Trimannosid		4e-13
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		4e-13
2ltn_A	181	Design, Expression, And Crystallization Of Recombin		4e-13
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		4e-13
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		4e-13
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		4e-13
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-13
1ofs_A	187	Pea Lectin-sucrose Complex Length = 187		4e-13
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		4e-13
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		5e-13
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		5e-13
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		5e-13
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		5e-13
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		6e-13
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		6e-13
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-13
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		6e-13
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-13
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-13
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		7e-13
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		7e-13
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		7e-13
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		7e-13
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		8e-13
1sfy_A	239	Crystal Structure Of Recombinant Erythrina Corallod		8e-13
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		9e-13
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-13
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		9e-13
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-13
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		9e-13
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-12
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-12
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-12
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-12
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-12
1uzy_A	242	Erythrina Crystagalli Lectin Length = 242		1e-12
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-12
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-12
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-12
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-12
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-12
1fyu_A	255	Crystal Structure Of Erythrina Corallodendron Lecti		1e-12
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-12
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-12
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-12
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-12
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		2e-12
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-12
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-12
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-12
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-12
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-12
1lte_A	239	Structure Of A Legume Lectin With An Ordered N-Link		2e-12
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-12
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-12
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-12
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-12
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-12
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-12
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-12
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-12
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-12
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-12
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-12
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-12
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-12
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-12
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-12
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		2e-12
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-12
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-12
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-12
3n35_A	242	Erythrina Corallodendron Lectin Mutant (Y106g) With		2e-12
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-12
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-12
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-12
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-12
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-12
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		3e-12
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-12
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-12
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-12
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-12
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-12
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-12
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-12
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		3e-12
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-12
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-12
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-12
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-12
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		4e-12
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		4e-12
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-12
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-12
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		5e-12
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-12
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-12
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		5e-12
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		5e-12
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		5e-12
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		5e-12
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		6e-12
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		6e-12
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		6e-12
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		6e-12
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		6e-12
2b7y_A	182	Fava Bean Lectin-Glucose Complex Length = 182		6e-12
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		6e-12
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		6e-12
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		7e-12
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		7e-12
1ax0_A	239	Erythrina Corallodendron Lectin In Complex With N-A		7e-12
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-12
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-12
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		8e-12
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		8e-12
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		8e-12
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		8e-12
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		8e-12
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		8e-12
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		9e-12
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		9e-12
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		9e-12
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-11
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-11
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-11
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-11
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-11
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-11
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-11
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-11
2lal_A	181	Crystal Structure Determination And Refinement At 2		1e-11
2fmd_A	240	Structural Basis Of Carbohydrate Recognition By Bow		1e-11
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-11
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-11
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-11
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-11
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-11
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-11
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-11
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-11
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-11
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-11
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-11
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-11
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-11
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-11
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		3e-11
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-11
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		3e-11
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-11
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-11
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-11
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-11
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-11
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-11
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		3e-11
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		3e-11
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		3e-11
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		3e-11
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-11
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-11
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-11
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-11
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-11
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		4e-11
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		4e-11
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		4e-11
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		4e-11
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		4e-11
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		4e-11
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		4e-11
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		4e-11
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		4e-11
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		5e-11
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		5e-11
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		5e-11
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		5e-11
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-11
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-11
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		5e-11
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		5e-11
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-11
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		5e-11
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		5e-11
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-11
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		5e-11
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		5e-11
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		5e-11
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		6e-11
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		6e-11
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		6e-11
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		6e-11
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		6e-11
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		6e-11
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		6e-11
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		6e-11
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		6e-11
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		6e-11
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		7e-11
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		7e-11
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		7e-11
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		7e-11
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		7e-11
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		7e-11
1n47_A	233	Isolectin B4 From Vicia Villosa In Complex With The		7e-11
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		8e-11
1dbn_A	239	Maackia Amurensis Leukoagglutinin (Lectin) With Sia		9e-11
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		9e-11
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		9e-11
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		9e-11
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		9e-11
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		1e-10
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-10
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-10
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-10
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		1e-10
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		1e-10
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-10
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-10
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		1e-10
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-10
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-10
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		1e-10
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-10
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-10
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		1e-10
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-10
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		1e-10
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-10
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-10
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		2e-10
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-10
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-10
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		2e-10
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-10
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		2e-10
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-10
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-10
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-10
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-10
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-10
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		2e-10
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-10
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-10
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-10
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		2e-10
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-10
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-10
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		2e-10
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-10
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-10
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		2e-10
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		2e-10
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-10
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-10
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-10
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-10
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-10
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-10
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-10
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-10
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-10
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-10
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-10
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-10
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-10
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-10
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-10
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-10
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-10
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-10
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		3e-10
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-10
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-10
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-10
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		3e-10
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-10
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-10
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-10
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		3e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		3e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		3e-10
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-10
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-10
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-10
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-10
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-10
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-10
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		4e-10
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-10
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		4e-10
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		4e-10
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-10
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-10
1qnw_A	242	Lectin Ii From Ulex Europaeus Length = 242		4e-10
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		5e-10
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-10
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-10
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-10
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		5e-10
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		6e-10
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		6e-10
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		6e-10
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		6e-10
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		6e-10
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		6e-10
3zvx_A	261	Structure Of The Lectin From Platypodium Elegans In		6e-10
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		7e-10
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		7e-10
3b2t_A	311	Structure Of Phosphotransferase Length = 311		7e-10
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		7e-10
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		7e-10
1ioa_A	240	Arcelin-5, A Lectin-Like Defense Protein From Phase		7e-10
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-10
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		7e-10
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		7e-10
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		7e-10
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		8e-10
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		8e-10
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		8e-10
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		8e-10
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		8e-10
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		9e-10
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		9e-10
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		9e-10
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		9e-10
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		9e-10
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		9e-10
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-09
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-09
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-09
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-09
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		1e-09
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-09
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-09
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-09
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-09
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-09
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-09
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-09
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-09
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-09
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-09
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-09
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-09
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-09
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-09
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-09
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-09
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-09
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-09
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		2e-09
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-09
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-09
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-09
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-09
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-09
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-09
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-09
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		2e-09
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-09
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-09
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-09
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-09
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-09
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-09
2pel_A	236	Peanut Lectin Length = 236		2e-09
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		2e-09
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		2e-09
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-09
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		3e-09
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		3e-09
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-09
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		3e-09
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		3e-09
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		3e-09
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-09
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-09
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-09
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-09
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-09
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-09
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-09
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-09
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		3e-09
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-09
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-09
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		3e-09
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-09
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-09
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-09
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-09
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-09
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		3e-09
1bzw_A	232	Peanut Lectin Complexed With C-Lactose Length = 232		3e-09
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		3e-09
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-09
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-09
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-09
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-09
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-09
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-09
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-09
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-09
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-09
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-09
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		4e-09
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		4e-09
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		4e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-09
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-09
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-09
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		4e-09
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-09
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		4e-09
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		4e-09
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-09
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		4e-09
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		4e-09
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-09
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		4e-09
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		4e-09
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		4e-09
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		4e-09
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-09
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		4e-09
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		4e-09
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-09
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		5e-09
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		5e-09
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-09
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		5e-09
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		5e-09
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		5e-09
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		5e-09
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		5e-09
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		5e-09
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		6e-09
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		6e-09
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		6e-09
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		6e-09
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		6e-09
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		6e-09
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		6e-09
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		6e-09
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		7e-09
4ae9_A	343	Structure And Function Of The Human Sperm-specific		7e-09
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		7e-09
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		7e-09
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		7e-09
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		7e-09
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		7e-09
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		7e-09
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		7e-09
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		8e-09
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		8e-09
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		8e-09
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		8e-09
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		8e-09
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		8e-09
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		8e-09
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		9e-09
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		9e-09
4ae6_A	343	Structure And Function Of The Human Sperm-specific		9e-09
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		9e-09
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		9e-09
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		9e-09
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		9e-09
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		9e-09
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		9e-09
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-08
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-08
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-08
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		1e-08
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-08
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		1e-08
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-08
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		1e-08
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-08
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-08
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-08
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-08
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-08
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-08
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		1e-08
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-08
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-08
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-08
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-08
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-08
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		1e-08
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-08
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-08
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-08
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-08
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-08
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-08
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-08
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-08
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-08
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-08
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-08
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-08
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-08
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-08
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		2e-08
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-08
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-08
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-08
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-08
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-08
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-08
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-08
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-08
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-08
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		2e-08
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-08
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		3e-08
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-08
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-08
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-08
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-08
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-08
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-08
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-08
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-08
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		4e-08
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		4e-08
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-08
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		4e-08
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		5e-08
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		5e-08
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		5e-08
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-08
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		5e-08
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		6e-08
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		6e-08
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-08
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		6e-08
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		6e-08
3soa_A	444	Full-Length Human Camkii Length = 444		7e-08
2eig_A	234	Lotus Tetragonolobus Seed Lectin (Isoform) Length =		7e-08
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		8e-08
4fie_A	423	Full-Length Human Pak4 Length = 423		9e-08
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-07
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-07
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-07
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-07
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-07
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-07
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-07
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-07
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-07
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-07
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-07
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-07
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-07
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-07
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-07
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-07
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-07
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-07
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		2e-07
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		2e-07
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-07
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-07
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-07
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-07
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-07
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		2e-07
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-07
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-07
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-07
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-07
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-07
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-07
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-07
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-07
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-07
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		2e-07
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-07
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-07
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		3e-07
1n3o_A	252	Pterocarcpus Angolensis Lectin In Complex With Alph		3e-07
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-07
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-07
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-07
1q8o_A	252	Pterocartpus Angolensis Lectin Pal In Complex With		3e-07
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-07
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		4e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		4e-07
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-07
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		4e-07
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		4e-07
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		4e-07
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		4e-07
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-07
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		4e-07
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		4e-07
2oza_A	356	Structure Of P38alpha Complex Length = 356		5e-07
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		5e-07
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		5e-07
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		6e-07
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		7e-07
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		7e-07
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		7e-07
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		7e-07
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		7e-07
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		7e-07
2oza_B	366	Structure Of P38alpha Complex Length = 366		7e-07
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		7e-07
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		7e-07
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		7e-07
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		7e-07
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		7e-07
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		7e-07
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		7e-07
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		7e-07
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		7e-07
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		7e-07
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		7e-07
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		7e-07
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		7e-07
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		7e-07
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		7e-07
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		7e-07
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		8e-07
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		8e-07
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		8e-07
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		8e-07
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		8e-07
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		8e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		8e-07
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		8e-07
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		8e-07
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		8e-07
3hec_A	348	P38 In Complex With Imatinib Length = 348		8e-07
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		8e-07
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		8e-07
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		8e-07
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		9e-07
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		9e-07
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		9e-07
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		9e-07
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		9e-07
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		9e-07
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-06
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-06
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		1e-06
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		1e-06
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-06
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-06
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-06
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		2e-06
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-06
1dhk_B	223	Structure Of Porcine Pancreatic Alpha-Amylase Lengt		2e-06
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-06
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-06
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-06
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-06
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		2e-06
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		3e-06
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-06
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-06
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-06
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-06
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		3e-06
1viw_B	205	Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Le		3e-06
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-06
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-06
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		3e-06
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		4e-06
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		4e-06
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		4e-06
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		4e-06
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		4e-06
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		4e-06
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		4e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		5e-06
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		5e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		5e-06
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		5e-06
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		5e-06
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		5e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		5e-06
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		5e-06
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		5e-06
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		5e-06
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		5e-06
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		5e-06
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		5e-06
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		5e-06
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		5e-06
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		5e-06
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		5e-06
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		5e-06
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		5e-06
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		5e-06
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		6e-06
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		6e-06
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		6e-06
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		6e-06
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		6e-06
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		6e-06
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		6e-06
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		6e-06
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		6e-06
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		7e-06
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		7e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		7e-06
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		7e-06
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		7e-06
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-06
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		7e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		8e-06
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		8e-06
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		9e-06
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		9e-06
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		9e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		9e-06
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-05
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-05
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-05
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-05
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-05
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		1e-05
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		1e-05
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		1e-05
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-05
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		1e-05
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		1e-05
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		1e-05
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		1e-05
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-05
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-05
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-05
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-05
1fx5_A	242	Crystal Structure Analysis Of Ulex Europaeus Lectin		2e-05
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-05
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-05
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-05
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-05
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-05
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-05
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-05
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-05
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-05
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-05
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		3e-05
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-05
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		3e-05
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-05
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-05
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		3e-05
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		3e-05

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  202 bits (515), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 169/311 (54%), Gaps = 24/311 (7%)
Query: 351 RFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLP-------TRMRE---------FAAEI 394
           RF   +L  A+  F    ++G GGFG+VYKG L         R++E         F  E+
Sbjct: 27  RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 395 ESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV--LSWEQRFNIIK 452
           E +    H++L+ L+G+C    + LLVY Y+ NGS+ S L +       L W +R  I  
Sbjct: 87  EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
           G A GL YLH+  +  +IHRDVK+ N+L+D +  A +GDFGLA+L D+        V GT
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGT 206
Query: 513 IGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID------SDHFILVDWVLEFQHL 566
           IG+IAPE   TGK+S  TDVF YGV+LLE+ TG+R  D       D  +L+DWV      
Sbjct: 207 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 266
Query: 567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNW 626
            ++  +VD +L  +Y   E+E ++Q+ LLC+      RP M +V+R L GD L    + W
Sbjct: 267 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEW 326
Query: 627 SSLDSQRSEMN 637
              +  R + N
Sbjct: 327 QKEEMFRQDFN 337

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  199 bits (506), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 168/310 (54%), Gaps = 29/310 (9%)
Query: 351 RFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLP-------TRMRE---------FAAEI 394
           RF   +L  A+  F    ++G GGFG+VYKG L         R++E         F  E+
Sbjct: 19  RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 395 ESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV--LSWEQRFNIIK 452
           E +    H++L+ L+G+C    + LLVY Y+ NGS+ S L +       L W +R  I  
Sbjct: 79  EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
           G A GL YLH+  +  +IHRDVK+ N+L+D +  A +GDFGLA+L D+        V G 
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGX 198
Query: 513 IGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID------SDHFILVDWVLEFQHL 566
           IG+IAPE   TGK+S  TDVF YGV+LLE+ TG+R  D       D  +L+DWV      
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNW 626
            ++  +VD +L  +Y   E+E ++Q+ LLC+      RP M +V+R L GD L    + W
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEW 318
Query: 627 SSLDSQRSEM 636
                Q+ EM
Sbjct: 319 -----QKEEM 323

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  152 bits (383), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/284 (34%), Positives = 146/284 (51%), Gaps = 25/284 (8%)
Query: 350 HRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----PTRMREFAAE-----------I 394
           +R    DL  AT  F    +IG G FG+VYKGVL       ++    E           I
Sbjct: 27  YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEI 86
Query: 395 ESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF--DNENFVLSWEQRFNIIK 452
           E+L   RH HLV+L G+C  + +++L+Y Y+ NG+L   L+  D     +SWEQR  I  
Sbjct: 87  ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV-G 511
           G A GL YLH    + +IHRDVKS N+L+D +   ++ DFG+++       +H   VV G
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI----DSDHFILVDWVLEFQHLG 567
           T+GYI PE    G+ +  +DV+++GV+L E+   R  I      +   L +W +E  + G
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           Q+  +VDPNL        +       + C    +E RP+M  VL
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  151 bits (382), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/284 (34%), Positives = 146/284 (51%), Gaps = 25/284 (8%)
Query: 350 HRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----PTRMREFAAE-----------I 394
           +R    DL  AT  F    +IG G FG+VYKGVL       ++    E           I
Sbjct: 27  YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEI 86
Query: 395 ESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF--DNENFVLSWEQRFNIIK 452
           E+L   RH HLV+L G+C  + +++L+Y Y+ NG+L   L+  D     +SWEQR  I  
Sbjct: 87  ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV-G 511
           G A GL YLH    + +IHRDVKS N+L+D +   ++ DFG+++       +H   VV G
Sbjct: 147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI----DSDHFILVDWVLEFQHLG 567
           T+GYI PE    G+ +  +DV+++GV+L E+   R  I      +   L +W +E  + G
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           Q+  +VDPNL        +       + C    +E RP+M  VL
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  139 bits (351), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 145/294 (49%), Gaps = 34/294 (11%)
Query: 350 HRFRYSDLYTATKGFKQSEV------IGTGGFGEVYKGVLPTRM---------------- 387
           H F + +L   T  F +  +      +G GGFG VYKG +                    
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 388 --REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS-LDSLLFDNENFVLSW 444
             ++F  EI+ + + +H++LV L G+     DL LVY Y+PNGS LD L   +    LSW
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH-GKI 503
             R  I +G A G+ +LHE      IHRD+KS N+L+D    A++ DFGLAR  +   + 
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD---HFILVDWV 560
              + +VGT  Y+APE  R G+ +  +D++++GV+LLEI TG   +D       +L    
Sbjct: 190 VMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248
Query: 561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
                   + D +D  +  +   + +E +  +   C H+K   RP +++V + L
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLL 301

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  139 bits (349), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 146/296 (49%), Gaps = 38/296 (12%)
Query: 350 HRFRYSDLYTATKGFKQSEV------IGTGGFGEVYKGVLPTRM---------------- 387
           H F + +L   T  F +  +      +G GGFG VYKG +                    
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 388 --REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS-LDSLLFDNENFVLSW 444
             ++F  EI+ + + +H++LV L G+     DL LVY Y+PNGS LD L   +    LSW
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS 504
             R  I +G A G+ +LHE      IHRD+KS N+L+D    A++ DFGLAR  +  K +
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE--KFA 187
Query: 505 HTT---NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD---HFILVD 558
            T     +VGT  Y+APE  R G+ +  +D++++GV+LLEI TG   +D       +L  
Sbjct: 188 QTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 559 WVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
                     + D +D  +  +   + +E +  +   C H+K   RP +++V + L
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLL 301

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 144/294 (48%), Gaps = 34/294 (11%)
Query: 350 HRFRYSDLYTATKGFKQSEV------IGTGGFGEVYKGVLPTRM---------------- 387
           H F + +L   T  F +  +      +G GGFG VYKG +                    
Sbjct: 7   HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 388 --REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS-LDSLLFDNENFVLSW 444
             ++F  EI+ + + +H++LV L G+     DL LVY Y+PNGS LD L   +    LSW
Sbjct: 67  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH-GKI 503
             R  I +G A G+ +LHE      IHRD+KS N+L+D    A++ DFGLAR  +   + 
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD---HFILVDWV 560
                +VGT  Y+APE  R G+ +  +D++++GV+LLEI TG   +D       +L    
Sbjct: 184 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 242
Query: 561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
                   + D +D  +  +   + +E +  +   C H+K   RP +++V + L
Sbjct: 243 EIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLL 295

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  133 bits (334), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 139/294 (47%), Gaps = 34/294 (11%)
Query: 350 HRFRYSDLYTATKGFKQSEV------IGTGGFGEVYKGVLPTRM---------------- 387
           H F + +L   T  F +  +       G GGFG VYKG +                    
Sbjct: 4   HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 63
Query: 388 --REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSW 444
             ++F  EI+   + +H++LV L G+     DL LVY Y PNGSL D L   +    LSW
Sbjct: 64  LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH-GKI 503
             R  I +G A G+ +LHE      IHRD+KS N+L+D    A++ DFGLAR  +   + 
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD---HFILVDWV 560
              + +VGT  Y APE  R G+ +  +D++++GV+LLEI TG   +D       +L    
Sbjct: 181 VXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 239
Query: 561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
                   + D +D     +   + +E    +   C H+K   RP +++V + L
Sbjct: 240 EIEDEEKTIEDYIDKKXNDADSTS-VEAXYSVASQCLHEKKNKRPDIKKVQQLL 292

>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 133/287 (46%), Gaps = 50/287 (17%)
Query: 5   VSFALR---LFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDN 61
           +SF ++   LF   +  A S     F F  FNET     LI +  A++   SG LR+T  
Sbjct: 4   ISFTMKRIVLFLILLTKAASANLISFTFKKFNETN----LILQRDATV--SSGKLRITKA 57
Query: 62  AHN------VIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAF 115
           A N       +G AFY+ PIQ+ D +T        +S++T F F +  PN+     GLAF
Sbjct: 58  AENGVPTAGSLGRAFYSTPIQIWDNTTG-----TVASWATSFTFNLQAPNAASPADGLAF 112
Query: 116 TVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNS 175
            + P  S P  K   +LG+ +S N +  SN   A+EFDT   YN   D    H+GI+VNS
Sbjct: 113 ALVPVGSQPKDKG-GFLGLFDSKN-YASSNQTVAVEFDTF--YNGGWDPTERHIGIDVNS 168
Query: 176 MKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYD-GVNRLVNVTICPMNKKNKLSFHFG 234
           +KSIK          T  DF   +G+  +  I YD   N LV   + P     K SF   
Sbjct: 169 IKSIKT---------TSWDFA--NGENAEVLITYDSSTNLLVASLVHP---SQKTSFIVS 214
Query: 235 KXXXXXXXXXXXXXXAFQETMYVGFSASTGRK---VSSHFILGWSFS 278
           +                 E + VGFSA+TG     V ++ +L WSF+
Sbjct: 215 E--------RVDLTSVLPEWVSVGFSATTGLSKGYVETNEVLSWSFA 253

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 140/290 (48%), Gaps = 46/290 (15%)
Query: 366 QSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKH 404
           + +VIG G FGEVYKG+L T                     +  +F  E   +G+  H +
Sbjct: 48  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF--DNENFVLSWEQRFNIIKGIAAGLLYLH 462
           ++ L+G   + + ++++ +Y+ NG+LD  L   D E  VL   Q   +++GIAAG+ YL 
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL---QLVGMLRGIAAGMKYLA 164
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPEL 520
                  +HRD+ + N+L+++++  ++ DFGL+R+ +    +  T   G I   + APE 
Sbjct: 165 ---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 521 ARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
               K + ++DV+++G+++ E+ T G RP          W L      +V+  ++     
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPY---------WELSNH---EVMKAINDGFRL 269
Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSL 629
              +     + QL + C  Q+   RP    ++  L  D+L+   D+  +L
Sbjct: 270 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL--DKLIRAPDSLKTL 317

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 41/272 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+G   + + +++V +Y+ NGSLDS L  ++  F +   Q   +++GIA+G+ YL    +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---D 165
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTG 524
              +HRD+ + N+LI++++  ++ DFGLAR+ +    +  T   G I   + +PE     
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        +
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPPM 273
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                + QL L C  +    RP   Q++  L+
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 41/272 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+G   + + +++V +Y+ NGSLDS L  ++  F +   Q   +++GIA+G+ YL    +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---D 165
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTG 524
              +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE     
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        +
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPPM 273
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                + QL L C  +    RP   Q++  L+
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 43/273 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           L+G   + + +++V +Y+ NGSLDS L   D +  V+   Q   +++GIA+G+ YL    
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLS--- 164
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELART 523
           +   +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE    
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
            K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        
Sbjct: 225 RKFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPP 272
Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           +     + QL L C  +    RP   Q++  L+
Sbjct: 273 MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 41/272 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+G   + + +++V +Y+ NGSLDS L  ++  F +   Q   +++GIA+G+ YL    +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---D 165
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTG 524
              +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE     
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        +
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPPM 273
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                + QL L C  +    RP   Q++  L+
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 41/272 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+G   + + +++V +Y+ NGSLDS L  ++  F +   Q   +++GIA+G+ YL    +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---D 165
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTG 524
              +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE     
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        +
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPPM 273
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                + QL L C  +    RP   Q++  L+
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 43/273 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 22  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           L+G   + + +++V +Y+ NGSLDS L   D +  V+   Q   +++GIA+G+ YL    
Sbjct: 82  LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLS--- 135
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELART 523
           +   +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE    
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
            K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPP 243
Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           +     + QL L C  +    RP   Q++  L+
Sbjct: 244 MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 41/272 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 49  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+G   + + +++V +Y+ NGSLDS L  ++  F +   Q   +++GIA+G+ YL    +
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---D 163
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTG 524
              +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE     
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 223
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        +
Sbjct: 224 KFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPPM 271
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                + QL L C  +    RP   Q++  L+
Sbjct: 272 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 303

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 41/272 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+G   + + +++V +Y+ NGSLDS L  ++  F +   Q   +++GIA+G+ YL    +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---D 165
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTG 524
              +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE     
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        +
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPPM 273
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                + QL L C  +    RP   Q++  L+
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 43/273 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 39  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           L+G   + + +++V +Y+ NGSLDS L   D +  V+   Q   +++GIA+G+ YL    
Sbjct: 99  LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLS--- 152
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELART 523
           +   +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE    
Sbjct: 153 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
            K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        
Sbjct: 213 RKFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPP 260
Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           +     + QL L C  +    RP   Q++  L+
Sbjct: 261 MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 293

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 132/272 (48%), Gaps = 41/272 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+G   + + +++V +Y+ NGSLDS L  ++  F +   Q   +++GIA+G+ YL    +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---D 165
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTG 524
              +HRD+ + N+LI++++  ++ DFGL R+ +    +  T   G I   + +PE     
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        +
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPPM 273
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                + QL L C  +    RP   Q++  L+
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 137/276 (49%), Gaps = 41/276 (14%)
Query: 365 KQSEVIGTGGFGEVYKGVLP--------------------TRMREFAAEIESLGRLRHKH 404
           K  +VIG G FGEV  G L                      + R+F +E   +G+  H +
Sbjct: 36  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +++L+G   +   ++++ +++ NGSLDS L  N+    +  Q   +++GIAAG+ YL   
Sbjct: 96  VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLA-- 152
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIG--YIAPEL 520
            +   +HRD+ + N+L+++++  ++ DFGL+R    D    ++T+ + G I   + APE 
Sbjct: 153 -DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 521 ARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
            +  K + ++DV++YG+++ E+ + G RP          W +  Q    V++ ++ +   
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPY---------WDMTNQ---DVINAIEQDYRL 259
Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
              +     + QL L C  +    RP   Q++  L+
Sbjct: 260 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295

>pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 124/262 (47%), Gaps = 48/262 (18%)
Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLDK 80
           F F  FNET     LI +  AS+   SG LRLT+   N       +G AFY+ PIQ+ D 
Sbjct: 6   FNFQRFNETN----LILQRDASV-SSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60
Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
           +T        +SF+T F F I  PN+     GLAF + P  S P  K   +LG+ + +N 
Sbjct: 61  TTG-----TVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKG-GFLGLFDGSNS 114
Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
           +    H  A+EFDT+  YN+  D    H+GI+VNS++SIK          T+ DF   +G
Sbjct: 115 NF---HTVAVEFDTL--YNKDWDPTERHIGIDVNSIRSIKT---------TRWDFV--NG 158
Query: 201 DPVQAWIDYD-GVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGF 259
           +  +  I YD   N LV   + P  K + +                       E + VGF
Sbjct: 159 ENAEVLITYDSSTNLLVASLVYPSQKTSFI-----------VSDTVDLKSVLPEWVSVGF 207
Query: 260 SASTG---RKVSSHFILGWSFS 278
           SA+TG     V ++ +L WSF+
Sbjct: 208 SATTGINKGNVETNDVLSWSFA 229

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 133/271 (49%), Gaps = 41/271 (15%)
Query: 369 VIGTGGFGEVYKGVLP--------------------TRMREFAAEIESLGRLRHKHLVNL 408
           VIG G FGEV  G L                      + R+F  E   +G+  H ++++L
Sbjct: 29  VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           +G   + + +++V +Y+ NGSLD+ L  N+  F +   Q   +++GI+AG+ YL    + 
Sbjct: 89  EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI--QLVGMLRGISAGMKYLS---DM 143
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTGK 525
             +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + APE     K
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 526 ASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA 584
            + ++DV++YG+++ E+ + G RP          W +  Q    V+  V+        + 
Sbjct: 204 FTSASDVWSYGIVMWEVVSYGERPY---------WEMTNQ---DVIKAVEEGYRLPSPMD 251
Query: 585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
               + QL L C  ++  +RP   +++  L+
Sbjct: 252 CPAALYQLMLDCWQKERNSRPKFDEIVNMLD 282

>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233

Iteration: 1
 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 124/262 (47%), Gaps = 48/262 (18%)
Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLDK 80
           F F  FNET     LI +  AS+   SG LRLT+   N       +G AFY+ PIQ+ D 
Sbjct: 6   FNFQRFNETN----LILQRDASV-SSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60
Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
           +T        +SF+T F F I  PN+     GLAF + P  S P  K   +LG+ + +N 
Sbjct: 61  TTGT-----VASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKG-GFLGLFDGSNS 114
Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
           +    H  A+EFDT+  YN+  D    H+GI+VNS++SIK          T+ DF   +G
Sbjct: 115 NF---HTVAVEFDTL--YNKDWDPTERHIGIDVNSIRSIKT---------TRWDFV--NG 158
Query: 201 DPVQAWIDYD-GVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGF 259
           +  +  I YD   N LV   + P  K + +                       E + VGF
Sbjct: 159 ENAEVLITYDSSTNLLVASLVYPSQKTSFI-----------VSDTVDLKSVLPEWVSVGF 207
Query: 260 SASTG---RKVSSHFILGWSFS 278
           SA+TG     V ++ +L WSF+
Sbjct: 208 SATTGINKGNVETNDVLSWSFA 229

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 136/277 (49%), Gaps = 43/277 (15%)
Query: 365 KQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKH 404
           K  EVIG G FGEV +G L                      + REF +E   +G+  H +
Sbjct: 17  KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++ L+G       ++++ +++ NG+LDS L  N+  F +   Q   +++GIA+G+ YL  
Sbjct: 77  IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYLA- 133
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK--ISHTTNVVGTIG--YIAPE 519
             E   +HRD+ + N+L+++++  ++ DFGL+R  +      ++T+++ G I   + APE
Sbjct: 134 --EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
                K + ++D ++YG+++ E+ + G RP          W +  Q    V++ ++ +  
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPY---------WDMSNQ---DVINAIEQDYR 239
Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                     + QL L C  +   ARP   QV+  L+
Sbjct: 240 LPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 276

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 136/280 (48%), Gaps = 49/280 (17%)
Query: 364 FKQSEVIGTGGFGEVYKGVLP--------------------TRMREFAAEIESLGRLRHK 403
            K   VIG G FGEV  G L                      + R+F  E   +G+  H 
Sbjct: 45  IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYL 461
           ++V+L+G   R + +++V +++ NG+LD+ L   D +  V+   Q   +++GIAAG+ YL
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRGIAAGMRYL 161
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPE 519
               +   +HRD+ + N+L+++++  ++ DFGL+R+ +    +  T   G I   + APE
Sbjct: 162 A---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE 218
Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
             +  K + ++DV++YG+++ E+ + G RP          W +  Q      DV+     
Sbjct: 219 AIQYRKFTSASDVWSYGIVMWEVMSYGERPY---------WDMSNQ------DVIKAIEE 263
Query: 579 SSYVVAEMEL---VLQLGLLCSHQKAEARPTMRQVLRYLN 615
              + A M+    + QL L C  ++   RP   Q++  L+
Sbjct: 264 GYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILD 303

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 367 SEVIGTGGFGEVYKGVL----------------PTRMREFAAEIESLGRLRHKHLVNLQG 410
            E IG G FG V++                     R+ EF  E+  + RLRH ++V   G
Sbjct: 42  KEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDN-ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
              +  +L +V +Y+  GSL  LL  +     L   +R ++   +A G+ YLH      +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           +HRD+KS N+L+D     ++ DFGL+RL        +    GT  ++APE+ R   ++  
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 530 TDVFAYGVLLLEIATGRRP 548
           +DV+++GV+L E+AT ++P
Sbjct: 220 SDVYSFGVILWELATLQQP 238

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 43/277 (15%)
Query: 365 KQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKH 404
           K  EVIG G FGEV +G L                      + REF +E   +G+  H +
Sbjct: 19  KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++ L+G       ++++ +++ NG+LDS L  N+  F +   Q   +++GIA+G+ YL  
Sbjct: 79  IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYLA- 135
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVG---TIGYIAPE 519
             E   +HRD+ + N+L+++++  ++ DFGL+R  +      T T+ +G    I + APE
Sbjct: 136 --EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
                K + ++D ++YG+++ E+ + G RP          W +  Q    V++ ++ +  
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPY---------WDMSNQ---DVINAIEQDYR 241
Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                     + QL L C  +   ARP   QV+  L+
Sbjct: 242 LPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 278

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 132/272 (48%), Gaps = 41/272 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+G   + + +++V + + NGSLDS L  ++  F +   Q   +++GIA+G+ YL    +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---D 165
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTG 524
              +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE     
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        +
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPPM 273
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                + QL L C  +    RP   Q++  L+
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 19/198 (9%)
Query: 368 EVIGTGGFGEVYKGVL----------------PTRMREFAAEIESLGRLRHKHLVNLQGW 411
           E IG G FG V++                     R+ EF  E+  + RLRH ++V   G 
Sbjct: 43  EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDN-ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +  +L +V +Y+  GSL  LL  +     L   +R ++   +A G+ YLH      ++
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           HR++KS N+L+D     ++ DFGL+RL     +S + +  GT  ++APE+ R   ++  +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS-SKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 531 DVFAYGVLLLEIATGRRP 548
           DV+++GV+L E+AT ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 43/273 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 22  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           L+G   + + +++V + + NGSLDS L   D +  V+   Q   +++GIA+G+ YL    
Sbjct: 82  LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---QLVGMLRGIASGMKYLS--- 135
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELART 523
           +   +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE    
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
            K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        
Sbjct: 196 RKFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPP 243
Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           +     + QL L C  +    RP   Q++  L+
Sbjct: 244 MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 50/298 (16%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHK 403
            K  +VIG G FGEV  G L                      + R+F +E   +G+  H 
Sbjct: 31  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 90
Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++++L+G   + + ++++ +Y+ NGSLD+ L  N+    +  Q   +++GI +G+ YL  
Sbjct: 91  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLS- 148
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELA 521
             +   +HRD+ + N+L+++++  ++ DFG++R+ +    +  T   G I   + APE  
Sbjct: 149 --DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
              K + ++DV++YG+++ E+ + G RP          W +  Q      DV+       
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMSYGERPY---------WDMSNQ------DVIKAIEEGY 251
Query: 581 YVVAEMELVL---QLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSE 635
            +   M+  +   QL L C  ++   RP   Q++  L+      +I N +SL    SE
Sbjct: 252 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD-----KLIRNPNSLKRTGSE 304

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 132/272 (48%), Gaps = 41/272 (15%)
Query: 368 EVIGTGGFGEVYKG--VLPTRM------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G   LP++                   R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+G   + + +++V + + NGSLDS L  ++  F +   Q   +++GIA+G+ YL    +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---D 165
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTG 524
              +HRD+ + N+LI++++  ++ DFGL+R+ +    +  T   G I   + +PE     
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K + ++DV++YG++L E+ + G RP          W +  Q    V+  VD        +
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPY---------WEMSNQ---DVIKAVDEGYRLPPPM 273
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                + QL L C  +    RP   Q++  L+
Sbjct: 274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 136/276 (49%), Gaps = 41/276 (14%)
Query: 365 KQSEVIGTGGFGEVYKGVLP--------------------TRMREFAAEIESLGRLRHKH 404
           K  +VIG G FGEV  G L                      + R+F +E   +G+  H +
Sbjct: 10  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +++L+G   +   ++++ +++ NGSLDS L  N+    +  Q   +++GIAAG+ YL   
Sbjct: 70  VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLA-- 126
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIG--YIAPEL 520
            +   +HR + + N+L+++++  ++ DFGL+R    D    ++T+ + G I   + APE 
Sbjct: 127 -DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 521 ARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
            +  K + ++DV++YG+++ E+ + G RP          W +  Q    V++ ++ +   
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPY---------WDMTNQ---DVINAIEQDYRL 233
Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
              +     + QL L C  +    RP   Q++  L+
Sbjct: 234 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 269

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 50/298 (16%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHK 403
            K  +VIG G FGEV  G L                      + R+F +E   +G+  H 
Sbjct: 10  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++++L+G   + + ++++ +Y+ NGSLD+ L  N+    +  Q   +++GI +G+ YL  
Sbjct: 70  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLS- 127
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELA 521
             +   +HRD+ + N+L+++++  ++ DFG++R+ +    +  T   G I   + APE  
Sbjct: 128 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
              K + ++DV++YG+++ E+ + G RP          W +  Q      DV+       
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPY---------WDMSNQ------DVIKAIEEGY 230
Query: 581 YVVAEMELVL---QLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSE 635
            +   M+  +   QL L C  ++   RP   Q++  L+      +I N +SL    SE
Sbjct: 231 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD-----KLIRNPNSLKRTGSE 283

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 50/298 (16%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHK 403
            K  +VIG G FGEV  G L                      + R+F +E   +G+  H 
Sbjct: 16  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++++L+G   + + ++++ +Y+ NGSLD+ L  N+    +  Q   +++GI +G+ YL  
Sbjct: 76  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLS- 133
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELA 521
             +   +HRD+ + N+L+++++  ++ DFG++R+ +    +  T   G I   + APE  
Sbjct: 134 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
              K + ++DV++YG+++ E+ + G RP          W +  Q      DV+       
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERPY---------WDMSNQ------DVIKAIEEGY 236
Query: 581 YVVAEMELVL---QLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSE 635
            +   M+  +   QL L C  ++   RP   Q++  L+      +I N +SL    SE
Sbjct: 237 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD-----KLIRNPNSLKRTGSE 289

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 35/282 (12%)
Query: 349 PHRFRYSDLYTATK-GFKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAE 393
           P +  + D +   +   K  E +G G FGEV+ G       V    +++       F AE
Sbjct: 8   PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 67
Query: 394 IESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
              + +L+H+ LV L      +  + ++ +Y+ NGSL   L       L+  +  ++   
Sbjct: 68  ANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 126
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA G+ ++ E   +  IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I
Sbjct: 127 IAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 183
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV 572
            + APE    G  +  +DV+++G+LL EI T GR P        V      Q+L +   +
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRM 238
Query: 573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVL 611
           V P+          E + QL  LC  ++ E RPT   +R VL
Sbjct: 239 VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVL 273

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 35/282 (12%)
Query: 349 PHRFRYSDLYTATK-GFKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAE 393
           P +  + D +   +   K  E +G G FGEV+ G       V    +++       F AE
Sbjct: 5   PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 64
Query: 394 IESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
              + +L+H+ LV L      +  + ++ +Y+ NGSL   L       L+  +  ++   
Sbjct: 65  ANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA G+ ++ E   +  IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I
Sbjct: 124 IAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 180
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV 572
            + APE    G  +  +DV+++G+LL EI T GR P        V      Q+L +   +
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRM 235
Query: 573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVL 611
           V P+          E + QL  LC  ++ E RPT   +R VL
Sbjct: 236 VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVL 270

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 35/282 (12%)
Query: 349 PHRFRYSDLYTATK-GFKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAE 393
           P +  + D +   +   K  E +G G FGEV+ G       V    +++       F AE
Sbjct: 4   PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 63
Query: 394 IESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
              + +L+H+ LV L      +  + ++ +Y+ NGSL   L       L+  +  ++   
Sbjct: 64  ANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 122
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA G+ ++ E   +  IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I
Sbjct: 123 IAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 179
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV 572
            + APE    G  +  +DV+++G+LL EI T GR P        V      Q+L +   +
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRM 234
Query: 573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVL 611
           V P+          E + QL  LC  ++ E RPT   +R VL
Sbjct: 235 VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVL 269

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 35/282 (12%)
Query: 349 PHRFRYSDLYTATK-GFKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAE 393
           P +  + D +   +   K  E +G G FGEV+ G       V    +++       F AE
Sbjct: 9   PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 68
Query: 394 IESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
              + +L+H+ LV L      +  + ++ +Y+ NGSL   L       L+  +  ++   
Sbjct: 69  ANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 127
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA G+ ++ E   +  IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I
Sbjct: 128 IAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 184
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV 572
            + APE    G  +  +DV+++G+LL EI T GR P        V      Q+L +   +
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRM 239
Query: 573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVL 611
           V P+          E + QL  LC  ++ E RPT   +R VL
Sbjct: 240 VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVL 274

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 35/282 (12%)
Query: 349 PHRFRYSDLYTATK-GFKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAE 393
           P +  + D +   +   K  E +G G FGEV+ G       V    +++       F AE
Sbjct: 7   PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 66
Query: 394 IESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
              + +L+H+ LV L      +  + ++ +Y+ NGSL   L       L+  +  ++   
Sbjct: 67  ANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 125
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA G+ ++ E   +  IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I
Sbjct: 126 IAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 182
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV 572
            + APE    G  +  +DV+++G+LL EI T GR P        V      Q+L +   +
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRM 237
Query: 573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVL 611
           V P+          E + QL  LC  ++ E RPT   +R VL
Sbjct: 238 VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVL 272

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 35/282 (12%)
Query: 349 PHRFRYSDLYTATK-GFKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAE 393
           P +  + D +   +   K  E +G G FGEV+ G       V    +++       F AE
Sbjct: 1   PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 60
Query: 394 IESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
              + +L+H+ LV L      +  + ++ +Y+ NGSL   L       L+  +  ++   
Sbjct: 61  ANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 119
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA G+ ++ E   +  IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I
Sbjct: 120 IAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 176
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV 572
            + APE    G  +  +DV+++G+LL EI T GR P        V      Q+L +   +
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRM 231
Query: 573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVL 611
           V P+          E + QL  LC  ++ E RPT   +R VL
Sbjct: 232 VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVL 266

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 92.0 bits (227), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 35/282 (12%)
Query: 349 PHRFRYSDLYTATK-GFKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAE 393
           P +  + D +   +   K  E +G G FGEV+ G       V    +++       F AE
Sbjct: 5   PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAE 64
Query: 394 IESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
              + +L+H+ LV L      +  + ++ +Y+ NGSL   L       L+  +  ++   
Sbjct: 65  ANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA G+ ++ E   +  IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I
Sbjct: 124 IAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 180
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV 572
            + APE    G  +  +DV+++G+LL EI T GR P        V      Q+L +   +
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRM 235
Query: 573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT---MRQVL 611
           V P+          E + QL  LC  ++ E RPT   +R VL
Sbjct: 236 VRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVL 270

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 364 FKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQ 409
            K  E +G G FGEV+ G       V    +++       F AE   + +L+H+ LV L 
Sbjct: 15  LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
                +  + ++ +Y+ NGSL   L       L+  +  ++   IA G+ ++ E   +  
Sbjct: 75  A-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 130
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I + APE    G  +  
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 530 TDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL 588
           +DV+++G+LL EI T GR P        V      Q+L +   +V P+          E 
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRMVRPDNCP-------EE 238
Query: 589 VLQLGLLCSHQKAEARPT---MRQVL 611
           + QL  LC  ++ E RPT   +R VL
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 364 FKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQ 409
            K  E +G G FGEV+ G       V    +++       F AE   + +L+H+ LV L 
Sbjct: 15  LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
                +  + ++ +Y+ NGSL   L       L+  +  ++   IA G+ ++ E   +  
Sbjct: 75  A-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 130
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I + APE    G  +  
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 530 TDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL 588
           +DV+++G+LL EI T GR P        V      Q+L +   +V P+          E 
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRMVRPDNCP-------EE 238
Query: 589 VLQLGLLCSHQKAEARPT---MRQVL 611
           + QL  LC  ++ E RPT   +R VL
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 364 FKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQ 409
            K  E +G G FGEV+ G       V    +++       F AE   + +L+H+ LV L 
Sbjct: 16  LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
                +  + ++ +Y+ NGSL   L       L+  +  ++   IA G+ ++ E   +  
Sbjct: 76  A-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 131
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I + APE    G  +  
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 530 TDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL 588
           +DV+++G+LL EI T GR P        V      Q+L +   +V P+          E 
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRMVRPDNCP-------EE 239
Query: 589 VLQLGLLCSHQKAEARPT---MRQVL 611
           + QL  LC  ++ E RPT   +R VL
Sbjct: 240 LYQLMRLCWKERPEDRPTFDYLRSVL 265

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 34/266 (12%)
Query: 364 FKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQ 409
            K  E +G G FGEV+ G       V    +++       F AE   + +L+H+ LV L 
Sbjct: 15  LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
                +  + ++ +Y+ NGSL   L       L+  +  ++   IA G+ ++ E   +  
Sbjct: 75  A-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 130
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I + APE    G  +  
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 530 TDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL 588
           +DV+++G+LL EI T GR P        V      Q+L +   +V P+          E 
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRMVRPDNCP-------EE 238
Query: 589 VLQLGLLCSHQKAEARPT---MRQVL 611
           + QL  LC  ++ E RPT   +R VL
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 39/272 (14%)
Query: 368 EVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVN 407
           ++IG+G  GEV  G L                      + R+F +E   +G+  H +++ 
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L+G   R R  ++V +Y+ NGSLD+ L  ++    +  Q   +++G+ AG+ YL    + 
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYLS---DL 170
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTGK 525
             +HRD+ + NVL+D+++  ++ DFGL+R+ +    +  T   G I   + APE      
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA 584
            S ++DV+++GV++ E+ A G RP          W +  +    V+  V+        + 
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPY---------WNMTNR---DVISSVEEGYRLPAPMG 278
Query: 585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLNG 616
               + QL L C H+    RP   Q++  L+ 
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 34/266 (12%)
Query: 364 FKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQ 409
            K  E +G G FGEV+ G       V    +++       F AE   + +L+H+ LV L 
Sbjct: 10  LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
               ++  + ++ +Y+ NGSL   L       L+  +  ++   IA G+ ++ E   +  
Sbjct: 70  AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 125
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I + APE    G  +  
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 530 TDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL 588
           +DV+++G+LL EI T GR P        V      Q+L +   +V P+          E 
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRMVRPDNCP-------EE 233
Query: 589 VLQLGLLCSHQKAEARPT---MRQVL 611
           + QL  LC  ++ E RPT   +R VL
Sbjct: 234 LYQLMRLCWKERPEDRPTFDYLRSVL 259

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 38/210 (18%)
Query: 368 EVIGTGGFGEVYKGV------------------LPTRMREFAAEIESLGRLRHKHLVNLQ 409
           E+IG GGFG+VY+                    +   +     E +    L+H +++ L+
Sbjct: 13  EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNE---NFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           G C ++ +L LV ++   G L+ +L       + +++W  +      IA G+ YLH+E  
Sbjct: 73  GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAI 126
Query: 467 QVVIHRDVKSGNVLI-----DADMN---ARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
             +IHRD+KS N+LI     + D++    ++ DFGLAR +     +   +  G   ++AP
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR---TTKMSAAGAYAWMAP 183
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           E+ R    S  +DV++YGVLL E+ TG  P
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVP 213

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 39/272 (14%)
Query: 368 EVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVN 407
           ++IG+G  GEV  G L                      + R+F +E   +G+  H +++ 
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L+G   R R  ++V +Y+ NGSLD+ L  ++    +  Q   +++G+ AG+ YL    + 
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYLS---DL 170
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG--YIAPELARTGK 525
             +HRD+ + NVL+D+++  ++ DFGL+R+ +    +  T   G I   + APE      
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA 584
            S ++DV+++GV++ E+ A G RP          W +  +    V+  V+        + 
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPY---------WNMTNR---DVISSVEEGYRLPAPMG 278
Query: 585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLNG 616
               + QL L C H+    RP   Q++  L+ 
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 34/266 (12%)
Query: 364 FKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQ 409
            K  E +G G FGEV+ G       V    +++       F AE   + +L+H+ LV L 
Sbjct: 11  LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
               ++  + ++ +Y+ NGSL   L       L+  +  ++   IA G+ ++ E   +  
Sbjct: 71  AVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 126
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHR++++ N+L+   ++ ++ DFGLARL +  + +        I + APE    G  +  
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 530 TDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL 588
           +DV+++G+LL EI T GR P        V      Q+L +   +V P+          E 
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRMVRPDNCP-------EE 234
Query: 589 VLQLGLLCSHQKAEARPT---MRQVL 611
           + QL  LC  ++ E RPT   +R VL
Sbjct: 235 LYQLMRLCWKERPEDRPTFDYLRSVL 260

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 34/266 (12%)
Query: 364 FKQSEVIGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQ 409
            K  E +G G  GEV+ G       V    +++       F AE   + +L+H+ LV L 
Sbjct: 15  LKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
                +  + ++ +Y+ NGSL   L       L+  +  ++   IA G+ ++ E   +  
Sbjct: 75  A-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNY 130
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+++ N+L+   ++ ++ DFGLARL +  + +        I + APE    G  +  
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 530 TDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL 588
           +DV+++G+LL EI T GR P        V      Q+L +   +V P+          E 
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRMVRPDNCP-------EE 238
Query: 589 VLQLGLLCSHQKAEARPT---MRQVL 611
           + QL  LC  ++ E RPT   +R VL
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +L+H  LV L      +
Sbjct: 17  LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYA-VVSE 75
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L D E   L      ++   +AAG+ Y+        IHRD++
Sbjct: 76  EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLR 132
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           S N+L+   +  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 133 SANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 193 GILLTELVTKGRVP 206

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEV----YKGVLPTRMR----------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +GTG FG V    ++G     ++          EF  E + +  L H+ LV L G C ++
Sbjct: 32  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           R + ++ +Y+ NG L + L +  +   + +Q   + K +   + YL     +  +HRD+ 
Sbjct: 92  RPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLA 147
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L++     ++ DFGL+R     + + +      + +  PE+    K S  +D++A+
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 536 GVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           GVL+ EI + G+ P   + F   +     +H+ Q L +  P+L S       E V  +  
Sbjct: 208 GVLMWEIYSLGKMPY--ERFTNSETA---EHIAQGLRLYRPHLAS-------EKVYTIMY 255
Query: 595 LCSHQKAEARPTMRQVL 611
            C H+KA+ RPT + +L
Sbjct: 256 SCWHEKADERPTFKILL 272

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEV----YKGVLPTRMR----------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +GTG FG V    ++G     ++          EF  E + +  L H+ LV L G C ++
Sbjct: 12  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           R + ++ +Y+ NG L + L +  +   + +Q   + K +   + YL     +  +HRD+ 
Sbjct: 72  RPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLA 127
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L++     ++ DFGL+R     + + +      + +  PE+    K S  +D++A+
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 187
Query: 536 GVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           GVL+ EI + G+ P   + F   +     +H+ Q L +  P+L S       E V  +  
Sbjct: 188 GVLMWEIYSLGKMPY--ERFTNSETA---EHIAQGLRLYRPHLAS-------EKVYTIMY 235
Query: 595 LCSHQKAEARPTMRQVL 611
            C H+KA+ RPT + +L
Sbjct: 236 SCWHEKADERPTFKILL 252

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEV----YKGVLPTRMR----------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +GTG FG V    ++G     ++          EF  E + +  L H+ LV L G C ++
Sbjct: 16  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           R + ++ +Y+ NG L + L +  +   + +Q   + K +   + YL     +  +HRD+ 
Sbjct: 76  RPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLA 131
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L++     ++ DFGL+R     + + +      + +  PE+    K S  +D++A+
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 191
Query: 536 GVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           GVL+ EI + G+ P   + F   +     +H+ Q L +  P+L S       E V  +  
Sbjct: 192 GVLMWEIYSLGKMPY--ERFTNSE---TAEHIAQGLRLYRPHLAS-------EKVYTIMY 239
Query: 595 LCSHQKAEARPTMRQVL 611
            C H+KA+ RPT + +L
Sbjct: 240 SCWHEKADERPTFKILL 256

>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 49/267 (18%)
Query: 16  VIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPI 75
           +I   S  ++  IF G        G  T+E+         L LT    N +G A Y+ PI
Sbjct: 7   LITKFSPDQQNLIFQG-------DGYTTKEK---------LTLTKAVKNTVGRALYSSPI 50
Query: 76  QMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYL 132
            + D+ T      N ++F T F F I  PNS     G  F ++P   +P   GG    YL
Sbjct: 51  HIWDRETG-----NVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGG----YL 101
Query: 133 GILNSTNDHKPSNHLFAIEFDTVNGYNETSD--SQGNHVGINVNSMKSIKLEPAAYYENG 190
           G+ NS  ++  +    A+EFDT   YN   D  ++  H+GI+VNS+KS+           
Sbjct: 102 GVFNSA-EYDKTTQTVAVEFDTF--YNAAWDPSNRDRHIGIDVNSIKSVN---------- 148
Query: 191 TKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXA 250
             + + L++G+     I ++    ++ V++   N  N L     +               
Sbjct: 149 -TKSWKLQNGEEANVVIAFNAATNVLTVSLTYPN--NSLE---EEVTSYTLSDVVSLKDV 202
Query: 251 FQETMYVGFSASTGRKVSSHFILGWSF 277
             E + +GFSA+TG + ++H +L WSF
Sbjct: 203 VPEWVRIGFSATTGAEYAAHEVLSWSF 229

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEV----YKGVLPTRMR----------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +GTG FG V    ++G     ++          EF  E + +  L H+ LV L G C ++
Sbjct: 17  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           R + ++ +Y+ NG L + L +  +   + +Q   + K +   + YL     +  +HRD+ 
Sbjct: 77  RPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLA 132
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L++     ++ DFGL+R     + + +      + +  PE+    K S  +D++A+
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 536 GVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           GVL+ EI + G+ P   + F   +     +H+ Q L +  P+L S       E V  +  
Sbjct: 193 GVLMWEIYSLGKMPY--ERFTNSE---TAEHIAQGLRLYRPHLAS-------EKVYTIMY 240
Query: 595 LCSHQKAEARPTMRQVL 611
            C H+KA+ RPT + +L
Sbjct: 241 SCWHEKADERPTFKILL 257

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEV----YKGVLPTRMR----------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +GTG FG V    ++G     ++          EF  E + +  L H+ LV L G C ++
Sbjct: 23  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           R + ++ +Y+ NG L + L +  +   + +Q   + K +   + YL     +  +HRD+ 
Sbjct: 83  RPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRDLA 138
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L++     ++ DFGL+R     + + +      + +  PE+    K S  +D++A+
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 198
Query: 536 GVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           GVL+ EI + G+ P   + F   +     +H+ Q L +  P+L S       E V  +  
Sbjct: 199 GVLMWEIYSLGKMPY--ERFTNSE---TAEHIAQGLRLYRPHLAS-------EKVYTIMY 246
Query: 595 LCSHQKAEARPTMRQVL 611
            C H+KA+ RPT + +L
Sbjct: 247 SCWHEKADERPTFKILL 263

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 368 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  ++ E RPT   +  +L 
Sbjct: 416 QCWRKEPEERPTFEYLQAFLE 436

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 368 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  ++ E RPT   +  +L 
Sbjct: 416 QCWRKEPEERPTFEYLQAFLE 436

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEV----YKGVLPTRMR----------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +GTG FG V    ++G     ++          EF  E + +  L H+ LV L G C ++
Sbjct: 17  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           R + ++ +Y+ NG L + L +  +   + +Q   + K +   + YL     +  +HRD+ 
Sbjct: 77  RPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLE---SKQFLHRDLA 132
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L++     ++ DFGL+R     + + +      + +  PE+    K S  +D++A+
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 536 GVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           GVL+ EI + G+ P   + F   +     +H+ Q L +  P+L S       E V  +  
Sbjct: 193 GVLMWEIYSLGKMPY--ERFTNSE---TAEHIAQGLRLYRPHLAS-------EKVYTIMY 240
Query: 595 LCSHQKAEARPTMRQVL 611
            C H+KA+ RPT + +L
Sbjct: 241 SCWHEKADERPTFKILL 257

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEV----YKGVLPTRMR----------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +GTG FG V    ++G     ++          EF  E + +  L H+ LV L G C ++
Sbjct: 32  LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
           R + ++ +Y+ NG L + L +  +   + +Q   + K +   + YL     +  +HRD+ 
Sbjct: 92  RPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLE---SKQFLHRDLA 147
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L++     ++ DFGL+R     + + +      + +  PE+    K S  +D++A+
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 536 GVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           GVL+ EI + G+ P   + F   +     +H+ Q L +  P+L S       E V  +  
Sbjct: 208 GVLMWEIYSLGKMPY--ERFTNSETA---EHIAQGLRLYRPHLAS-------EKVYTIMY 255
Query: 595 LCSHQKAEARPTMRQVL 611
            C H+KA+ RPT + +L
Sbjct: 256 SCWHEKADERPTFKILL 272

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 31/260 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 333
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 390
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 391 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 450
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 451 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 498
Query: 595 LCSHQKAEARPTMRQVLRYL 614
            C  ++ E RPT   +  +L
Sbjct: 499 QCWRKEPEERPTFEYLQAFL 518

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 19  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 77
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 78  EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 134
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 135 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 194
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 195 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 242
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  ++ E RPT   +  +L 
Sbjct: 243 QCWRKEPEERPTFEYLQAFLE 263

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 16  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 74
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 75  EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 131
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 132 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 191
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 192 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 239
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  ++ E RPT   +  +L 
Sbjct: 240 QCWRKEPEERPTFEYLQAFLE 260

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 24/198 (12%)
Query: 370 IGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 20  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 78
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           K  L +V  +    SL   L  +E      ++  +I +  A G+ YLH    + +IHRD+
Sbjct: 79  KPQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHA---KSIIHRDL 134
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA---SCST 530
           KS N+ +  D   ++GDFGLA +      SH    + G+I ++APE+ R   +   S  +
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 531 DVFAYGVLLLEIATGRRP 548
           DV+A+G++L E+ TG+ P
Sbjct: 195 DVYAFGIVLYELMTGQLP 212

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 307
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 368 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  ++ E RPT   +  +L 
Sbjct: 416 QCWRKEPEERPTFEYLQAFLE 436

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEV----YKGVLPTRMR----------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G+G FG V    +KG     ++          EF  E +++ +L H  LV   G C ++
Sbjct: 16  LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +YI NG L + L  +    L   Q   +   +  G+ +L        IHRD+ 
Sbjct: 76  YPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLA 131
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L+D D+  ++ DFG+ R     +   +      + + APE+    K S  +DV+A+
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAF 191
Query: 536 GVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+L+ E+ + G+ P D   +   + VL+   + Q   +  P+L S       + + Q+  
Sbjct: 192 GILMWEVFSLGKMPYDL--YTNSEVVLK---VSQGHRLYRPHLAS-------DTIYQIMY 239
Query: 595 LCSHQKAEARPTMRQVL 611
            C H+  E RPT +Q+L
Sbjct: 240 SCWHELPEKRPTFQQLL 256

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 21/201 (10%)
Query: 368 EVIGTGGFGEVYKGV--------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCK 413
           E +G G +G VYK +              + + ++E   EI  + +    H+V   G   
Sbjct: 35  EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
           +  DL +V +Y   GS+  ++    N  L+ ++   I++    GL YLH   +   IHRD
Sbjct: 95  KNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRD 150
Query: 474 VKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDV 532
           +K+GN+L++ + +A+L DFG+A +L D   ++    V+GT  ++APE+ +    +C  D+
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAGQLTD--XMAKRNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 533 FAYGVLLLEIATGRRPIDSDH 553
           ++ G+  +E+A G+ P    H
Sbjct: 209 WSLGITAIEMAEGKPPYADIH 229

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 15  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 73
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 74  EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 130
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 131 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 190
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 191 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 238
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  +  E RPT   +  +L 
Sbjct: 239 QCWRKDPEERPTFEYLQAFLE 259

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGVL---------------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 18  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 76
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
           K  L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 77  KPQLAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 126
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA +      SH    + G+I ++APE+ R     
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLP 210

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 17  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 75
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 76  EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 132
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 193 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 240
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  +  E RPT   +  +L 
Sbjct: 241 QCWRKDPEERPTFEYLQAFLE 261

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 79
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
           K  L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 80  KPQLAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 129
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA +      SH    + G+I ++APE+ R     
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGVL---------------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
           K  L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 75  KPQLAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 124
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA +      SH    + G+I ++APE+ R     
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI++L   RH H++ L        D+ +V +Y+  G L   +  N    L  ++   + +
Sbjct: 66  EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQ 123
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            I +G+ Y H     +V+HRD+K  NVL+DA MNA++ DFGL+ +   G+    +   G+
Sbjct: 124 QILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGS 178
Query: 513 IGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDH 553
             Y APE+  +G+  A    D+++ GV+L  +  G  P D DH
Sbjct: 179 PNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 23  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 82  EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLR 138
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 199 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  ++ E RPT   +  +L 
Sbjct: 247 QCWRKEPEERPTFEYLQAFLE 267

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 23  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 82  EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLR 138
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 199 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  ++ E RPT   +  +L 
Sbjct: 247 QCWRKEPEERPTFEYLQAFLE 267

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 79
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
           K  L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 80  KPQLAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 129
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA +      SH    + G+I ++APE+ R     
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 85  EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 202 GILLTELTTKGRVP 215

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 85  EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 202 GILLTELTTKGRVP 215

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 85  EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 202 GILLTELTTKGRVP 215

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 85  EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 202 GILLTELTTKGRVP 215

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHL 405
           F + E IG G FGEV+KG+   R ++  A                  EI  L +    ++
Sbjct: 29  FTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
               G   +   L ++ +Y+  GS   LL   E   L   Q   I++ I  GL YLH E 
Sbjct: 88  TKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEK 144
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +   IHRD+K+ NVL+      +L DFG+A      +I   T  VGT  ++APE+ +   
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQSA 200
Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
                D+++ G+  +E+A G  P    H + V +++   +         P L  +Y    
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--------PPTLEGNYSKPL 252
Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLRY 613
            E V      C +++   RPT +++L++
Sbjct: 253 KEFVEA----CLNKEPSFRPTAKELLKH 276

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 43  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 101
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
           K  L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 102 KPQLAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 151
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA +      SH    + G+I ++APE+ R     
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLP 235

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 24/198 (12%)
Query: 370 IGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 32  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           K  L +V  +    SL   L  +E      ++  +I +  A G+ YLH    + +IHRD+
Sbjct: 91  KPQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHA---KSIIHRDL 146
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA---SCST 530
           KS N+ +  D   ++GDFGLA        SH    + G+I ++APE+ R   +   S  +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 531 DVFAYGVLLLEIATGRRP 548
           DV+A+G++L E+ TG+ P
Sbjct: 207 DVYAFGIVLYELMTGQLP 224

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 127/297 (42%), Gaps = 53/297 (17%)
Query: 349 PHR-FRYSDLYTATKGFKQSEVIGTGGFGEVYK-------GVLPTR---------MREFA 391
           PHR FR SDL          EV+G G FG+  K        V+  +          R F 
Sbjct: 3   PHRIFRPSDLI-------HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL 55
Query: 392 AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII 451
            E++ +  L H +++   G   + + L  + +YI  G+L  ++  + +    W QR +  
Sbjct: 56  KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYPWSQRVSFA 114
Query: 452 KGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-------- 503
           K IA+G+ YLH      +IHRD+ S N L+  + N  + DFGLARL    K         
Sbjct: 115 KDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 504 -----SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LV 557
                     VVG   ++APE+          DVF++G++L EI  GR   D D+    +
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI-IGRVNADPDYLPRTM 230
Query: 558 DWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           D+ L  +  G +     PN   S+          + + C     E RP+  ++  +L
Sbjct: 231 DFGLNVR--GFLDRYCPPNCPPSF--------FPITVRCCDLDPEKRPSFVKLEHWL 277

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 102
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
           K  L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 103 KPQLAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 152
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA +      SH    + G+I ++APE+ R     
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 31/261 (11%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 251
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 308
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGL RL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 309 AANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 368
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           G+LL E+ T GR P       +V+         +VLD V+            E +  L  
Sbjct: 369 GILLTELTTKGRVPYPG----MVN--------REVLDQVERGYRMPCPPECPESLHDLMC 416
Query: 595 LCSHQKAEARPTMRQVLRYLN 615
            C  +  E RPT   +  +L 
Sbjct: 417 QCWRKDPEERPTFEYLQAFLE 437

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 38/256 (14%)
Query: 370 IGTGGFGEVYKG------------VLPTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G            + P  M  + F  E   +  L+H  LV L     R+
Sbjct: 21  LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + ++ +Y+  GSL   L  +E   +   +  +    IA G+ Y+     +  IHRD++
Sbjct: 81  EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLR 137
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + NVL+   +  ++ DFGLAR+ +  + +        I + APE    G  +  +DV+++
Sbjct: 138 AANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSF 197
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME----LVL 590
           G+LL EI T G+ P                + G+    V   L   Y +  +E     + 
Sbjct: 198 GILLYEIVTYGKIP----------------YPGRTNADVMTALSQGYRMPRVENCPDELY 241
Query: 591 QLGLLCSHQKAEARPT 606
            +  +C  +KAE RPT
Sbjct: 242 DIMKMCWKEKAEERPT 257

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 370 IGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQGWCKRK 415
           IG+G FG V+ G       V    +RE       F  E E + +L H  LV L G C  +
Sbjct: 13  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + LV++++ +G L   L   +  + + E    +   +  G+ YL E     VIHRD+ 
Sbjct: 73  APICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLA 128
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L+  +   ++ DFG+ R     + + +T     + + +PE+    + S  +DV+++
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188
Query: 536 GVLLLEI-ATGRRPID--SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQL 592
           GVL+ E+ + G+ P +  S+  ++ D    F+       +  P L S++       V Q+
Sbjct: 189 GVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-------LYKPRLASTH-------VYQI 234
Query: 593 GLLCSHQKAEARPTMRQVLRYL 614
              C  ++ E RP   ++LR L
Sbjct: 235 MNHCWKERPEDRPAFSRLLRQL 256

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + ++RH+ LV L      +
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVSE 84
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 85  EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 202 GILLTELTTKGRVP 215

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 370 IGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQGWCKRK 415
           IG+G FG V+ G       V    +RE       F  E E + +L H  LV L G C  +
Sbjct: 18  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + LV++++ +G L   L   +  + + E    +   +  G+ YL E     VIHRD+ 
Sbjct: 78  APICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLA 133
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L+  +   ++ DFG+ R     + + +T     + + +PE+    + S  +DV+++
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 193
Query: 536 GVLLLEI-ATGRRPID--SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQL 592
           GVL+ E+ + G+ P +  S+  ++ D    F+       +  P L S++       V Q+
Sbjct: 194 GVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-------LYKPRLASTH-------VYQI 239
Query: 593 GLLCSHQKAEARPTMRQVLRYL 614
              C  ++ E RP   ++LR L
Sbjct: 240 MNHCWRERPEDRPAFSRLLRQL 261

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD+ 
Sbjct: 85  EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLA 141
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 202 GILLTELTTKGRVP 215

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 370 IGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQGWCKRK 415
           IG+G FG V+ G       V    +RE       F  E E + +L H  LV L G C  +
Sbjct: 15  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + LV++++ +G L   L   +  + + E    +   +  G+ YL E     VIHRD+ 
Sbjct: 75  APICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLA 130
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L+  +   ++ DFG+ R     + + +T     + + +PE+    + S  +DV+++
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 536 GVLLLEI-ATGRRPID--SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQL 592
           GVL+ E+ + G+ P +  S+  ++ D    F+       +  P L S++       V Q+
Sbjct: 191 GVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-------LYKPRLASTH-------VYQI 236
Query: 593 GLLCSHQKAEARPTMRQVLRYL 614
              C  ++ E RP   ++LR L
Sbjct: 237 MNHCWKERPEDRPAFSRLLRQL 258

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGVL---------------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
           K  L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 75  KPQLAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 124
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA        SH    + G+I ++APE+ R     
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGVL---------------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
            + L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 76  PQ-LAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 124
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA +      SH    + G+I ++APE+ R     
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHL 405
           F + E IG G FGEV+KG+   R ++  A                  EI  L +    ++
Sbjct: 9   FTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
               G   +   L ++ +Y+  GS   LL   E   L   Q   I++ I  GL YLH E 
Sbjct: 68  TKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEK 124
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +   IHRD+K+ NVL+      +L DFG+A      +I   T  VGT  ++APE+ +   
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQSA 180
Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
                D+++ G+  +E+A G  P    H + V +++   +         P L  +Y    
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--------PPTLEGNYSKPL 232
Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLRY 613
            E V      C +++   RPT +++L++
Sbjct: 233 KEFVEA----CLNKEPSFRPTAKELLKH 256

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  G L   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 85  EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 202 GILLTELTTKGRVP 215

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 36  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 94
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
           K  L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 95  KPQLAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 144
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA        SH    + G+I ++APE+ R     
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLP 228

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 19/194 (9%)
Query: 370 IGTGGFGEVYKGVL------------PTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G              P  M    F  E + + +LRH+ LV L      +
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + +V +Y+  G L   L       L   Q  ++   IA+G+ Y+        +HRD++
Sbjct: 85  EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLR 141
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+++
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 536 GVLLLEIAT-GRRP 548
           G+LL E+ T GR P
Sbjct: 202 GILLTELTTKGRVP 215

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRLRHKHLVNLQ 409
           K  +  EV+G G FG V K     +             + F  E+  L R+ H ++V L 
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENF-------VLSWEQRFNIIKGIAAGLLYLH 462
           G C     + LV +Y   GSL ++L   E          +SW  +       + G+ YLH
Sbjct: 68  GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLH 119
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
               + +IHRD+K  N+L+ A     ++ DFG A        +H TN  G+  ++APE+ 
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ----THMTNNKGSAAWMAPEVF 175
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPID 550
                S   DVF++G++L E+ T R+P D
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFD 204

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 32/209 (15%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRLRHKHLVNLQ 409
           K  +  EV+G G FG V K     +             + F  E+  L R+ H ++V L 
Sbjct: 9   KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENF-------VLSWEQRFNIIKGIAAGLLYLH 462
           G C     + LV +Y   GSL ++L   E          +SW  +       + G+ YLH
Sbjct: 69  GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLH 120
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
               + +IHRD+K  N+L+ A     ++ DFG A        +H TN  G+  ++APE+ 
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ----THMTNNKGSAAWMAPEVF 176
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPID 550
                S   DVF++G++L E+ T R+P D
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFD 205

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 370 IGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQGWCKRK 415
           IG+G FG V+ G       V    +RE       F  E E + +L H  LV L G C  +
Sbjct: 15  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + LV++++ +G L   L   +  + + E    +   +  G+ YL E     VIHRD+ 
Sbjct: 75  APICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDLA 130
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L+  +   ++ DFG+ R     + + +T     + + +PE+    + S  +DV+++
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 536 GVLLLEI-ATGRRPID--SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQL 592
           GVL+ E+ + G+ P +  S+  ++ D    F+       +  P L S++       V Q+
Sbjct: 191 GVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-------LYKPRLASTH-------VYQI 236
Query: 593 GLLCSHQKAEARPTMRQVLRYL 614
              C  ++ E RP   ++LR L
Sbjct: 237 MNHCWKERPEDRPAFSRLLRQL 258

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 36/204 (17%)
Query: 370 IGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 102
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI------AAGLLYLHEEWEQV 468
           K  L +V  +    SL    + + + +   E +F +IK I      A G+ YLH    + 
Sbjct: 103 KPQLAIVTQWCEGSSL----YHHLHII---ETKFEMIKLIDIARQTAQGMDYLHA---KS 152
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA- 526
           +IHRD+KS N+ +  D+  ++GDFGLA        SH    + G+I ++APE+ R     
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 527 --SCSTDVFAYGVLLLEIATGRRP 548
             S  +DV+A+G++L E+ TG+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 24/198 (12%)
Query: 370 IGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           IG+G FG VYKG                 P +++ F  E+  L + RH +++   G+   
Sbjct: 32  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
            + L +V  +    SL   L  +E      ++  +I +  A G+ YLH    + +IHRD+
Sbjct: 92  PQ-LAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHA---KSIIHRDL 146
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGKA---SCST 530
           KS N+ +  D   ++GDFGLA        SH    + G+I ++APE+ R   +   S  +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 531 DVFAYGVLLLEIATGRRP 548
           DV+A+G++L E+ TG+ P
Sbjct: 207 DVYAFGIVLYELMTGQLP 224

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 35/262 (13%)
Query: 370 IGTGGFGEVYKGVLPTRMR--------------EFAAEIESLGRLRHKHLVNLQGWCKRK 415
           IG+G FG V+ G    + +              +F  E E + +L H  LV L G C  +
Sbjct: 35  IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + LV++++ +G L   L   +  + + E    +   +  G+ YL E     VIHRD+ 
Sbjct: 95  APICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLA 150
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L+  +   ++ DFG+ R     + + +T     + + +PE+    + S  +DV+++
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 210
Query: 536 GVLLLEI-ATGRRPID--SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQL 592
           GVL+ E+ + G+ P +  S+  ++ D    F+       +  P L S++       V Q+
Sbjct: 211 GVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-------LYKPRLASTH-------VYQI 256
Query: 593 GLLCSHQKAEARPTMRQVLRYL 614
              C  ++ E RP   ++LR L
Sbjct: 257 MNHCWKERPEDRPAFSRLLRQL 278

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 362 KGFKQSEVIGTGGFGEVY------------KGVLPTRM--REFAAEIESLGRLRHKHLVN 407
           +  K  + +G G FGEV+            K + P  M    F AE   +  L+H  LV 
Sbjct: 15  ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L      K  + ++ +++  GSL   L  +E       +  +    IA G+ ++ +   +
Sbjct: 75  LHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---R 130
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
             IHRD+++ N+L+ A +  ++ DFGLAR+ +  + +        I + APE    G  +
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 528 CSTDVFAYGVLLLEIAT-GRRP 548
             +DV+++G+LL+EI T GR P
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIP 212

>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 34  ETKTNQGLITRERASILKPSGALRLTD---NAHNVIGHAFYNKPIQMLDKSTSLSSKPNA 90
           ET     LI +  A++    G L LT+   N  + +G AFY+ PIQ+ D++       N 
Sbjct: 9   ETFNKTNLILQGDATV-SSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID-----NL 62
Query: 91  SSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAI 150
           +SFST F F+I   N     +GLAF + P  S P  K   YLG+ N+TN  + + H  A+
Sbjct: 63  ASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPKLKG-RYLGLFNTTNYDRDA-HTVAV 120
Query: 151 EFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYD 210
            FDTV           N + I+VNS++ I  E   +  N         +G+  +  I YD
Sbjct: 121 VFDTV----------SNRIEIDVNSIRPIATESCNFGHN---------NGEKAEVRITYD 161
Query: 211 GVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSASTGRK---V 267
                + V++   + + K                       ++ + VGFSA++G K    
Sbjct: 162 SPKNDLRVSLLYPSSEEKC----------HVSATVPLEKEVEDWVSVGFSATSGSKKETT 211
Query: 268 SSHFILGWSFSMN 280
            +H +L WSFS N
Sbjct: 212 ETHNVLSWSFSSN 224

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHL 405
           F + E IG G FGEV+KG+   R ++  A                  EI  L +    ++
Sbjct: 24  FTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
               G   +   L ++ +Y+  GS   LL   E   L   Q   I++ I  GL YLH E 
Sbjct: 83  TKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEK 139
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +   IHRD+K+ NVL+      +L DFG+A      +I      VGT  ++APE+ +   
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX-FVGTPFWMAPEVIKQSA 195
Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
                D+++ G+  +E+A G  P    H + V +++   +         P L  +Y    
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--------PPTLEGNYSKPL 247
Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLRY 613
            E V      C +++   RPT +++L++
Sbjct: 248 KEFVEA----CLNKEPSFRPTAKELLKH 271

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 35/262 (13%)
Query: 370 IGTGGFGEVYKG-------VLPTRMRE-------FAAEIESLGRLRHKHLVNLQGWCKRK 415
           IG+G FG V+ G       V    +RE       F  E E + +L H  LV L G C  +
Sbjct: 16  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + LV +++ +G L   L   +  + + E    +   +  G+ YL E     VIHRD+ 
Sbjct: 76  APICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLA 131
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + N L+  +   ++ DFG+ R     + + +T     + + +PE+    + S  +DV+++
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 191
Query: 536 GVLLLEI-ATGRRPID--SDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQL 592
           GVL+ E+ + G+ P +  S+  ++ D    F+       +  P L S++       V Q+
Sbjct: 192 GVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-------LYKPRLASTH-------VYQI 237
Query: 593 GLLCSHQKAEARPTMRQVLRYL 614
              C  ++ E RP   ++LR L
Sbjct: 238 MNHCWRERPEDRPAFSRLLRQL 259

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 364 FKQSEVIGTGGFGEVY-------------KGV-LPTRMRE-----FAAEIESLGRLRHKH 404
           +K  + +G GG   VY             K + +P R +E     F  E+ +  +L H++
Sbjct: 13  YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +V++    +      LV +YI   +L   +    +  LS +   N    I  G+ + H+ 
Sbjct: 73  IVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               ++HRD+K  N+LID++   ++ DFG+A+      ++ T +V+GT+ Y +PE A+  
Sbjct: 131 R---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 525 KASCSTDVFAYGVLLLEIATGRRP 548
                TD+++ G++L E+  G  P
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPP 211

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLG 398
            +LY  +   +  EV   G FG V+K  L   + E+ A                E+ SL 
Sbjct: 17  ENLYFQSMPLQLLEVKARGRFGCVWKAQL---LNEYVAVKIFPIQDKQSWQNEYEVYSLP 73
Query: 399 RLRHKHLVNLQGWCKRKR----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI 454
            ++H++++   G  KR      DL L+  +   GSL   L  N   V+SW +  +I + +
Sbjct: 74  GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETM 130
Query: 455 AAGLLYLHEE-------WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT 507
           A GL YLHE+        +  + HRD+KS NVL+  ++ A + DFGLA  F+ GK +  T
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT 190
Query: 508 N-VVGTIGYIAPELARTG-----KASCSTDVFAYGVLLLEIAT 544
           +  VGT  Y+APE+          A    D++A G++L E+A+
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHL 405
           F + E IG G FGEV+KG+   R ++  A                  EI  L +    ++
Sbjct: 9   FTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
               G   +   L ++ +Y+  GS   LL   E   L   Q   I++ I  GL YLH E 
Sbjct: 68  TKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEK 124
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +   IHRD+K+ NVL+      +L DFG+A      +I      VGT  ++APE+ +   
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX-FVGTPFWMAPEVIKQSA 180
Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
                D+++ G+  +E+A G  P    H + V +++   +         P L  +Y    
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--------PPTLEGNYSKPL 232
Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLRY 613
            E V      C +++   RPT +++L++
Sbjct: 233 KEFVEA----CLNKEPSFRPTAKELLKH 256

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 362 KGFKQSEVIGTGGFGEVY------------KGVLPTRM--REFAAEIESLGRLRHKHLVN 407
           +  K  + +G G FGEV+            K + P  M    F AE   +  L+H  LV 
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L      K  + ++ +++  GSL   L  +E       +  +    IA G+ ++ +   +
Sbjct: 248 LHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---R 303
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
             IHRD+++ N+L+ A +  ++ DFGLAR+ +  + +        I + APE    G  +
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 528 CSTDVFAYGVLLLEIAT-GRRP 548
             +DV+++G+LL+EI T GR P
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIP 385

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 38/256 (14%)
Query: 370 IGTGGFGEVYKG------------VLPTRM--REFAAEIESLGRLRHKHLVNLQGWCKRK 415
           +G G FGEV+ G            + P  M  + F  E   +  L+H  LV L     ++
Sbjct: 20  LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK 475
             + ++ +++  GSL   L  +E   +   +  +    IA G+ Y+     +  IHRD++
Sbjct: 80  EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLR 136
Query: 476 SGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAY 535
           + NVL+   +  ++ DFGLAR+ +  + +        I + APE    G  +  ++V+++
Sbjct: 137 AANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSF 196
Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME----LVL 590
           G+LL EI T G+ P                + G+    V   L   Y +  ME     + 
Sbjct: 197 GILLYEIVTYGKIP----------------YPGRTNADVMSALSQGYRMPRMENCPDELY 240
Query: 591 QLGLLCSHQKAEARPT 606
            +  +C  +KAE RPT
Sbjct: 241 DIMKMCWKEKAEERPT 256

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 24/201 (11%)
Query: 367 SEVIGTGGFGEVYKGV---------------LPTRMREFAAEIESLGRLRHKHLVNLQGW 411
           S  IG+G FG VYKG                 P + + F  E+  L + RH +++   G+
Sbjct: 41  STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH 471
              K +L +V  +    SL   L   E     + Q  +I +  A G+ YLH    + +IH
Sbjct: 101 MT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMF-QLIDIARQTAQGMDYLHA---KNIIH 155
Query: 472 RDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT-NVVGTIGYIAPELAR---TGKAS 527
           RD+KS N+ +   +  ++GDFGLA +      S       G++ ++APE+ R       S
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 528 CSTDVFAYGVLLLEIATGRRP 548
             +DV++YG++L E+ TG  P
Sbjct: 216 FQSDVYSYGIVLYELMTGELP 236

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 32/212 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV---------LPTRMR------------EFAAEIESLGRLRH 402
            K+ +V+G+G FG VYKG+         +P  ++            EF  E   +  + H
Sbjct: 17  LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            HLV L G C     + LV   +P+G L   + ++++ + S +   N    IA G++YL 
Sbjct: 77  PHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCVQIAKGMMYLE 134
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG---TIGYIAPE 519
           E   + ++HRD+ + NVL+ +  + ++ DFGLARL +  +  +  N  G    I ++A E
Sbjct: 135 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY--NADGGKMPIKWMALE 189
Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                K +  +DV++YGV + E+ T G +P D
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI++L   RH H++ L        D  +V +Y+  G L   +  +   V   E R  + +
Sbjct: 61  EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEAR-RLFQ 118
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            I + + Y H     +V+HRD+K  NVL+DA MNA++ DFGL+ +   G+   T+   G+
Sbjct: 119 QILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGS 173
Query: 513 IGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDH 553
             Y APE+  +G+  A    D+++ GV+L  +  G  P D +H
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 46/272 (16%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHL 405
           F + E IG G FGEV+KG+   R ++  A                  EI  L +    ++
Sbjct: 25  FTKLERIGKGSFGEVFKGI-DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLL----FDNENFVLSWEQRFNIIKGIAAGLLYL 461
               G   +   L ++ +Y+  GS   LL    FD             ++K I  GL YL
Sbjct: 84  TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-------TMLKEILKGLDYL 136
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H E +   IHRD+K+ NVL+    + +L DFG+A      +I   T  VGT  ++APE+ 
Sbjct: 137 HSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVI 192
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY 581
           +        D+++ G+  +E+A G  P    H + V +++   +         P L   +
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN--------PPTLVGDF 244
Query: 582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
             +  E +      C ++    RPT +++L++
Sbjct: 245 TKSFKEFIDA----CLNKDPSFRPTAKELLKH 272

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 32/212 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV---------LPTRMR------------EFAAEIESLGRLRH 402
            K+ +V+G+G FG VYKG+         +P  ++            EF  E   +  + H
Sbjct: 40  LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            HLV L G C     + LV   +P+G L   + ++++ + S +   N    IA G++YL 
Sbjct: 100 PHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCVQIAKGMMYLE 157
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG---TIGYIAPE 519
           E   + ++HRD+ + NVL+ +  + ++ DFGLARL +  +  +  N  G    I ++A E
Sbjct: 158 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY--NADGGKMPIKWMALE 212
Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                K +  +DV++YGV + E+ T G +P D
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244

>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 117/266 (43%), Gaps = 51/266 (19%)
Query: 25  EEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVI------GHAFYNKPIQML 78
           + F F  FN    +   I +  A++   SG L+LT    N I      G AFY+ PIQ+ 
Sbjct: 4   QSFSFKNFN----SPSFILQGDATV--SSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIY 57
Query: 79  DKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFP---GGKAEHYLGIL 135
           DKST        +S++T F  +I  P+      G+AF + P  S P   GG    YLG+ 
Sbjct: 58  DKSTGA-----VASWATSFTVKISAPSKASFADGIAFALVPVGSEPRRNGG----YLGVF 108
Query: 136 NSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDF 195
           +S + +  S    A+EFDT++  N   D    H+GI+VNS+KSI               +
Sbjct: 109 DS-DVYNNSAQTVAVEFDTLS--NSGWDPSMKHIGIDVNSIKSI-----------ATVSW 154
Query: 196 TLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETM 255
            L +G+  +  I Y+    L+  ++           H  +                 E +
Sbjct: 155 DLANGENAEILITYNAATSLLVASLV----------HPSRRTSYILSERVDITNELPEYV 204
Query: 256 YVGFSASTGRK---VSSHFILGWSFS 278
            VGFSA+TG     + +H +L WSF+
Sbjct: 205 SVGFSATTGLSEGYIETHDVLSWSFA 230

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G FGEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 19  LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     +S      +   I++ + YL +   +  IHRD+
Sbjct: 79  EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDL 135
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 535 YGVLLLEIAT 544
           +GVLL EIAT
Sbjct: 196 FGVLLWEIAT 205

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 86  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 138
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 139 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 196 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     +S      +   I++ + YL +   +  IHRD+
Sbjct: 81  EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDL 137
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 198 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 246 RACWQWNPSDRPSFAEI 262

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 59  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 111
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 112 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 168
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 169 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 53  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 105
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 106 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 162
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 163 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With Methyl-Alpha-D-Galactose (Monoclinic Form) Length = 238

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 119/269 (44%), Gaps = 51/269 (18%)
Query: 23  QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVI------GHAFYNKPIQ 76
           + + F F+ F E   N   +  +R + +K +G L LT    N +      G A Y +PI+
Sbjct: 1   ETQSFNFDHFEE---NSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIK 57
Query: 77  MLDKSTSLSSKPNASSFSTCFVFQIVTPNS-GQGGFGLAFTVSPQPSFPGGKAEHYLGIL 135
           + D +T      N +SF T F F I  P +  +   GL F + P P+ P G+    LG+ 
Sbjct: 58  IWDSTTG-----NVASFETRFSFNITQPYAYPEPADGLTFFMVP-PNSPQGEDGGNLGVF 111
Query: 136 NSTNDHKP--SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKE 193
                 KP   ++ FA+EFDT   +  T D Q  H+GI+VNS+ S K             
Sbjct: 112 ------KPPEGDNAFAVEFDT---FQNTWDPQVPHIGIDVNSIVSSK-----------TL 151
Query: 194 DFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFH-FGKXXXXXXXXXXXXXXAFQ 252
            F LE+G      I YD   +++NV          L+FH  G                  
Sbjct: 152 HFQLENGGVANVVIKYDSPTKILNVV---------LAFHSVGTVYTLSNIVDLKQEFPNS 202
Query: 253 ETMYVGFSASTGRK---VSSHFILGWSFS 278
           E + VG SA+TG +   V +H I+ WSF+
Sbjct: 203 EWVNVGLSATTGYQKNAVETHEIISWSFT 231

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     +S      +   I++ + YL +   +  IHRD+
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDL 137
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 198 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 246 RACWQWNPSDRPSFAEI 262

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 62  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 114
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 115 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 171
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 172 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 54  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 106
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 107 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 163
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 164 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 55  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 107
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 108 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 165 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     +S      +   I++ + YL +   +  IHRD+
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDL 142
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P     +  +D       L QV ++++ +          E V +L 
Sbjct: 203 FGVLLWEIATYGMSP-----YPGID-------LSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 251 RACWQWNPSDRPSFAEI 267

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     +S      +   I++ + YL +   +  IHRD+
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDL 137
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 198 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 246 RACWQWNPSDRPSFAEI 262

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 55  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 107
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 108 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 165 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 58  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 110
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 111 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 60  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 112
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 113 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 170 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     +S      +   I++ + YL +   +  IHRD+
Sbjct: 81  EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDL 137
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 198 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 246 RACWQWNPSDRPSFAEI 262

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 61  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 113
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 114 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 170
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 171 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     +S      +   I++ + YL +   +  IHRD+
Sbjct: 79  EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDL 135
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 535 YGVLLLEIAT 544
           +GVLL EIAT
Sbjct: 196 FGVLLWEIAT 205

>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 117/270 (43%), Gaps = 47/270 (17%)
Query: 21  SQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKP 74
           +   + F F+ F   K NQ  + ++  + +  SG L+LT    N       +G A Y  P
Sbjct: 1   TTNTDSFTFSKF---KPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASP 57
Query: 75  IQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGI 134
           I + D  T +      +SF+T F F I  PN      GLAF ++P  S P   A  +LG+
Sbjct: 58  INIWDSKTGV-----VASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGA-GFLGL 111
Query: 135 LNSTNDHKPSNHLFAIEFDTVNGYNETS--DSQGNHVGINVNSMKSIKLEPAAYYENGTK 192
            +S      S    A+EFDT   Y  T   D    H+GI+VNS+KSIK           K
Sbjct: 112 FDSAV-FNSSYQTVAVEFDT---YENTVFLDPPDTHIGIDVNSIKSIKT---------VK 158
Query: 193 EDFTLESGDPVQAWIDYDGVNR-LVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAF 251
            D  L +G+  +  I YD   + LV   + P +K + +                      
Sbjct: 159 WD--LANGEAAKVLITYDSSAKLLVAALVYPSSKTSFI-----------LSDVVDLKSVL 205
Query: 252 QETMYVGFSASTGRK---VSSHFILGWSFS 278
            E + +GFSA+TG     + +H +  WSF+
Sbjct: 206 PEWVSIGFSAATGASSGYIETHDVFSWSFA 235

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 73  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 125
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 126 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 73  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 125
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 126 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     +S      +   I++ + YL +   +  IHRD+
Sbjct: 79  EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDL 135
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 136 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 535 YGVLLLEIAT 544
           +GVLL EIAT
Sbjct: 196 FGVLLWEIAT 205

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++ + 
Sbjct: 58  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQAH 110
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
            +R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 111 AERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI++L   RH H++ L        D  +V +Y+  G L   +  +   V   E R  + +
Sbjct: 61  EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEAR-RLFQ 118
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            I + + Y H     +V+HRD+K  NVL+DA MNA++ DFGL+ +   G+     +  G+
Sbjct: 119 QILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRDSCGS 173
Query: 513 IGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDH 553
             Y APE+  +G+  A    D+++ GV+L  +  G  P D +H
Sbjct: 174 PNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215

>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 117/270 (43%), Gaps = 47/270 (17%)
Query: 21  SQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKP 74
           +   + F F+ F   K NQ  + ++  + +  SG L+LT    N       +G A Y  P
Sbjct: 1   TTNTDSFTFSKF---KPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASP 57
Query: 75  IQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGI 134
           I + D  T +      +SF+T F F I  PN      GLAF ++P  S P   A  +LG+
Sbjct: 58  INIWDSKTGV-----VASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGA-GFLGL 111
Query: 135 LNSTNDHKPSNHLFAIEFDTVNGYNETS--DSQGNHVGINVNSMKSIKLEPAAYYENGTK 192
            +S      S    A+EFDT   Y  T   D    H+GI+VNS+KSIK           K
Sbjct: 112 FDSAV-FNSSYQTVAVEFDT---YENTVFLDPPDTHIGIDVNSIKSIKT---------VK 158
Query: 193 EDFTLESGDPVQAWIDYDGVNR-LVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAF 251
            D  L +G+  +  I YD   + LV   + P +K + +                      
Sbjct: 159 WD--LANGEAAKVLITYDSSAKLLVAALVYPSSKTSFI-----------LSDVVDLKSVL 205
Query: 252 QETMYVGFSASTGRK---VSSHFILGWSFS 278
            E + +GFSA+TG     + +H +  WSF+
Sbjct: 206 PEWVSIGFSAATGASSGYIETHDVFSWSFA 235

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 83  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 139
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 200 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 247
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 248 RACWQWNPSDRPSFAEI 264

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 82  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 138
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 199 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 246
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 247 RACWQWNPSDRPSFAEI 263

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 380 KGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDN 437
           +G  P     +  EIE L  L H+H+V  +G C+ +  + + LV +Y+P GSL   L   
Sbjct: 48  EGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--- 104
Query: 438 ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL 497
               +   Q     + I  G+ YLH    Q  IHR + + NVL+D D   ++GDFGLA+ 
Sbjct: 105 PRHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKA 161
Query: 498 FDHGKISHTTNVVG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              G   +     G   + + APE  +  K   ++DV+++GV L E+ T
Sbjct: 162 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 44/260 (16%)
Query: 32  FNETKTNQGLITRERASILKPSGALRLTDNAHNV-----IGHAFYNKPIQMLDKSTSLSS 86
           F +   NQ  +  +  +++  +G L+LT+  + V     +G A Y  P Q+ D +T    
Sbjct: 8   FPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTG--- 64
Query: 87  KPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYLGILNSTNDHKP 143
             N +SF T F F I  PN      GLAF ++P   QP   GG     LGI      +K 
Sbjct: 65  --NVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPLDLGGM----LGIFKDGYFNK- 117
Query: 144 SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPV 203
           SN + A+EFDT +  N   D +G H+GINVNS++SIK  P           +   +G+  
Sbjct: 118 SNQIVAVEFDTFS--NGDWDPKGRHLGINVNSIESIKTVP-----------WNWTNGEVA 164
Query: 204 QAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSAST 263
             +I Y+   + +  ++   + +                          E +  GFSA+T
Sbjct: 165 NVFISYEASTKSLTASLVYPSLETSFIID----------AIVDVKIVLPEWVRFGFSATT 214
Query: 264 GRK---VSSHFILGWSFSMN 280
           G     V ++ +L WSF  N
Sbjct: 215 GIDKGYVQTNDVLSWSFESN 234

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 86  EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 142
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 203 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 251 RACWQWNPSDRPSFAEI 267

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 142
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 203 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 251 RACWQWNPSDRPSFAEI 267

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 380 KGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDN 437
           +G  P     +  EIE L  L H+H+V  +G C+ +  + + LV +Y+P GSL   L   
Sbjct: 47  EGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--- 103
Query: 438 ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL 497
               +   Q     + I  G+ YLH    Q  IHR + + NVL+D D   ++GDFGLA+ 
Sbjct: 104 PRHCVGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKA 160
Query: 498 FDHGKISHTTNVVG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              G   +     G   + + APE  +  K   ++DV+++GV L E+ T
Sbjct: 161 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 114/267 (42%), Gaps = 50/267 (18%)
Query: 310 ILIAALSTVAVILLGTLLIFKLYRRIAQFEILE------DWELDCPHRFRYSDLYTATKG 363
           +L A L+ +        L  K + R  Q++ LE      DW LD    FR          
Sbjct: 146 LLRAVLAHLGQAPFQEFLDSKYFLRFLQWKWLEAQPMGEDWFLD----FR---------- 191
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLRHKH 404
                V+G GGFGEV+   +    + +A                    E + L ++  + 
Sbjct: 192 -----VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF--DNENFVLSWEQRFNIIKGIAAGLLYLH 462
           +V+L    + K DL LV   +  G +   ++  D +N      +       I +GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
           +   + +I+RD+K  NVL+D D N R+ D GLA     G+ + T    GT G++APEL  
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLL 362
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPI 549
             +   S D FA GV L E+   R P 
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPF 389

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 55  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 107
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 108 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 137
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 198 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 246 RACWQWNPSDRPSFAEI 262

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 25  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 85  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 141
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 202 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 249
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 250 RACWQWNPSDRPSFAEI 266

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 142
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 203 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 251 RACWQWNPSDRPSFAEI 267

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +Y+P GSL        +++   
Sbjct: 56  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-------RDYLQKH 108
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHR++ + N+L++ +   ++GDFGL ++ 
Sbjct: 109 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVL 165
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K  +     G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 166 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 82  EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 138
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 199 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 246
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 247 RACWQWNPSDRPSFAEI 263

>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 45/263 (17%)
Query: 25  EEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQML 78
           + F F  FN +      I +  A++   S  LRLT    N       +G AFY+ PIQ+ 
Sbjct: 4   QSFSFKNFNSSS----FILQGDATV--SSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIY 57
Query: 79  DKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
           DKST        +S++T F   I  PN      G+AF + P  S P   +  +LG+ +S 
Sbjct: 58  DKSTGA-----VASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNS-GFLGVFDS- 110
Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
           + +  S    A+EFDT +  N   D    H+GI+VNS+KSI+              + L 
Sbjct: 111 DVYDNSAQTVAVEFDTFS--NTDWDPTSRHIGIDVNSIKSIR-----------TASWGLA 157
Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVG 258
           +G   +  I Y+    L+  ++           H  +                 E + +G
Sbjct: 158 NGQNAEILITYNAATSLLVASLV----------HPSRRTSYIVSERVDITNELPEYVSIG 207
Query: 259 FSASTGRK---VSSHFILGWSFS 278
           FSA+TG       +H +L WSF+
Sbjct: 208 FSATTGLSEGYTETHDVLSWSFA 230

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 34  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 94  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 150
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 210
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 211 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 258
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 259 RACWQWNPSDRPSFAEI 275

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 83  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 139
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 200 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 247
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 248 RACWQWNPSDRPSFAEI 264

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 81  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 137
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 198 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 245
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 246 RACWQWNPSDRPSFAEI 262

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     +S      +   I++ + YL +   +  IHR++
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNL 344
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 345 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 404
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P     +  +D       L QV ++++ +          E V +L 
Sbjct: 405 FGVLLWEIATYGMSP-----YPGID-------LSQVYELLEKDYRMERPEGCPEKVYELM 452
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 453 RACWQWNPSDRPSFAEI 469

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 86  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 142
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 203 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 250
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 251 RACWQWNPSDRPSFAEI 267

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 20/176 (11%)
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF-----------D 436
           ++F  E E L  L+H+H+V   G C     L++V++Y+ +G L+  L             
Sbjct: 60  KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 437 NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR 496
           N    L+  Q  +I + IAAG++YL     Q  +HRD+ + N L+  ++  ++GDFG++R
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
Query: 497 LF---DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
                D+ ++   T +   I ++ PE     K +  +DV++ GV+L EI T G++P
Sbjct: 177 DVYSTDYYRVGGHTML--PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 83  EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDL 139
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P        +D       L QV ++++ +          E V +L 
Sbjct: 200 FGVLLWEIATYGMSPYPG-----ID-------LSQVYELLEKDYRMERPEGCPEKVYELM 247
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 248 RACWQWNPSDRPSFAEI 264

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 54  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 170
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++A E  +
Sbjct: 171 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 284
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 285 --------LYEVMLKCWHPKAEMRPSFSELV 307

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDNENFV 441
           P     +  EI+ L  L H+H++  +G C+ +  + L LV +Y+P GSL   L       
Sbjct: 57  PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHS 113
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG 501
           +   Q     + I  G+ YLH    Q  IHR++ + NVL+D D   ++GDFGLA+    G
Sbjct: 114 IGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
Query: 502 KISHTTNVVG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              +     G   + + APE  +  K   ++DV+++GV L E+ T
Sbjct: 171 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 27  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 87  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 143
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++A E  +
Sbjct: 144 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 257
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 258 --------LYEVMLKCWHPKAEMRPSFSELV 280

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 151
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++A E  +
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 265
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSELV 288

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 151
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++A E  +
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 265
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSELV 288

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 53  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 169
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++A E  +
Sbjct: 170 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 283
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 284 --------LYEVMLKCWHPKAEMRPSFSELV 306

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 33  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 93  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 149
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++A E  +
Sbjct: 150 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 263
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 264 --------LYEVMLKCWHPKAEMRPSFSELV 286

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 146
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++A E  +
Sbjct: 147 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 260
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 261 --------LYEVMLKCWHPKAEMRPSFSELV 283

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 369 VIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLRHKHLVNLQ 409
           V+G GGFGEV+   +    + +A                    E + L ++  + +V+L 
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLF--DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
              + K DL LV   +  G +   ++  D +N      +       I +GL +LH+   +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---R 308
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
            +I+RD+K  NVL+D D N R+ D GLA     G+ + T    GT G++APEL    +  
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLLGEEYD 367
Query: 528 CSTDVFAYGVLLLEIATGRRPI 549
            S D FA GV L E+   R P 
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 94  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 150
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++A E  +
Sbjct: 151 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 264
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 265 --------LYEVMLKCWHPKAEMRPSFSELV 287

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 369 VIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLRHKHLVNLQ 409
           V+G GGFGEV+   +    + +A                    E + L ++  + +V+L 
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLF--DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
              + K DL LV   +  G +   ++  D +N      +       I +GL +LH+   +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---R 308
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
            +I+RD+K  NVL+D D N R+ D GLA     G+ + T    GT G++APEL    +  
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLLGEEYD 367
Query: 528 CSTDVFAYGVLLLEIATGRRPI 549
            S D FA GV L E+   R P 
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDNENFV 441
           P     +  EI+ L  L H+H++  +G C+      L LV +Y+P GSL   L       
Sbjct: 74  PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHS 130
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG 501
           +   Q     + I  G+ YLH    Q  IHRD+ + NVL+D D   ++GDFGLA+    G
Sbjct: 131 IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187
Query: 502 KISHTTNVVG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              +     G   + + APE  +  K   ++DV+++GV L E+ T
Sbjct: 188 HEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 369 VIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLRHKHLVNLQ 409
           V+G GGFGEV+   +    + +A                    E + L ++  + +V+L 
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLF--DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
              + K DL LV   +  G +   ++  D +N      +       I +GL +LH+   +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---R 308
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
            +I+RD+K  NVL+D D N R+ D GLA     G+ + T    GT G++APEL    +  
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLLGEEYD 367
Query: 528 CSTDVFAYGVLLLEIATGRRPI 549
            S D FA GV L E+   R P 
Sbjct: 368 FSVDYFALGVTLYEMIAARGPF 389

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDNENFV 441
           P     +  EI+ L  L H+H++  +G C+ +  + L LV +Y+P GSL   L       
Sbjct: 57  PQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHS 113
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG 501
           +   Q     + I  G+ YLH    Q  IHR++ + NVL+D D   ++GDFGLA+    G
Sbjct: 114 IGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
Query: 502 KISHTTNVVG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              +     G   + + APE  +  K   ++DV+++GV L E+ T
Sbjct: 171 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 148
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFD--HGKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D  +  + + T     + ++A E  +
Sbjct: 149 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 262
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 263 --------LYEVMLKCWHPKAEMRPSFSELV 285

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ YL    
Sbjct: 94  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLAS-- 150
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDH--GKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D     + + T     + ++A E  +
Sbjct: 151 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 264
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 265 --------LYEVMLKCWHPKAEMRPSFSELV 287

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 353 RYSDLYTATKG-FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEI 394
           R   L T T G ++  E +GTGGFG V + +                  P     +  EI
Sbjct: 5   RSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEI 64
Query: 395 ESLGRLRHKHLVNLQ----GWCK-RKRDL-LLVYDYIPNGSLDSLLFDNENFV-LSWEQR 447
           + + +L H ++V+ +    G  K    DL LL  +Y   G L   L   EN   L     
Sbjct: 65  QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 124
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKIS 504
             ++  I++ L YLHE     +IHRD+K  N+++      +  ++ D G A+  D G++ 
Sbjct: 125 RTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL- 180
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
             T  VGT+ Y+APEL    K + + D +++G L  E  TG RP
Sbjct: 181 -CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
           +R+F  EIE L  L+H ++V  +G C    +R+L L+ +++P GSL         ++   
Sbjct: 58  LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL-------REYLQKH 110
Query: 445 EQRFNIIK------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           ++R + IK       I  G+ YL     +  IHRD+ + N+L++ +   ++GDFGL ++ 
Sbjct: 111 KERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
Query: 499 DHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              K        G   I + APE     K S ++DV+++GV+L E+ T
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY GV                   + EF  E   +  ++H +LV L G C  
Sbjct: 40  LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    +V +Y+P G+L   L +     ++      +   I++ + YL +   +  IHRD+
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK---KNFIHRDL 156
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE       S  +DV+A
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWA 216
Query: 535 YGVLLLEIAT 544
           +GVLL EIAT
Sbjct: 217 FGVLLWEIAT 226

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 353 RYSDLYTATKG-FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEI 394
           R   L T T G ++  E +GTGGFG V + +                  P     +  EI
Sbjct: 4   RSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEI 63
Query: 395 ESLGRLRHKHLVNLQ----GWCK-RKRDL-LLVYDYIPNGSLDSLLFDNENFV-LSWEQR 447
           + + +L H ++V+ +    G  K    DL LL  +Y   G L   L   EN   L     
Sbjct: 64  QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI 123
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKIS 504
             ++  I++ L YLHE     +IHRD+K  N+++      +  ++ D G A+  D G++ 
Sbjct: 124 RTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL- 179
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
             T  VGT+ Y+APEL    K + + D +++G L  E  TG RP
Sbjct: 180 -CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 23/179 (12%)
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDS----------LLFDN 437
           ++F  E E L  L+H+H+V   G C     L++V++Y+ +G L+           +L D 
Sbjct: 62  KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 438 E----NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG 493
           +       L   Q  +I   IA+G++YL     Q  +HRD+ + N L+ A++  ++GDFG
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 494 LARLF---DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           ++R     D+ ++   T +   I ++ PE     K +  +DV+++GV+L EI T G++P
Sbjct: 179 MSRDVYSTDYYRVGGHTML--PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 364 FKQSEVIGTGGFGEVYKGV-------LPTRMREFAA------------EIESLGRLRHKH 404
           FK   ++G G F  VY+         +  +M +  A            E++   +L+H  
Sbjct: 13  FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           ++ L  + +    + LV +   NG ++  L  N     S  +  + +  I  G+LYLH  
Sbjct: 73  ILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               ++HRD+   N+L+  +MN ++ DFGLA         H T + GT  YI+PE+A   
Sbjct: 132 G---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRS 187
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSD 552
                +DV++ G +   +  GR P D+D
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTD 215

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 21/169 (12%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSL-LFDNE-NFVLSWEQRFNI 450
           EI+ L +LRH++LVNL   CK+K+   LV++++ +  LD L LF N  ++ +  +  F I
Sbjct: 74  EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI 133
Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNV 509
           I GI  G  + H      +IHRD+K  N+L+      +L DFG AR L   G++    + 
Sbjct: 134 INGI--GFCHSHN-----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV--YDDE 184
Query: 510 VGTIGYIAPEL----ARTGKASCSTDVFAYGVLLLEIATGRR--PIDSD 552
           V T  Y APEL     + GKA    DV+A G L+ E+  G    P DSD
Sbjct: 185 VATRWYRAPELLVGDVKYGKA---VDVWAIGCLVTEMFMGEPLFPGDSD 230

>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 110/260 (42%), Gaps = 47/260 (18%)
Query: 32  FNETKTNQGLITRERASILKPSGALRLTDNAH-----NVIGHAFYNKPIQMLDKSTSLSS 86
           FN+   N+  +  +R + +  +  L LT   +     N  G A Y KP+Q+ D +T    
Sbjct: 7   FNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTG--- 63
Query: 87  KPNASSFSTCFVFQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSN 145
             N +SF T F F I  P        GL F ++P P+   G+   Y GI N  + +    
Sbjct: 64  --NVASFETRFSFSIRQPFPRPHPADGLVFFIAP-PNTQTGEGGGYFGIYNPLSPYP--- 117
Query: 146 HLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQA 205
              A+EFDT   +  T D Q  H+GI+VNS+ S K  P           FTL++G     
Sbjct: 118 -FVAVEFDT---FRNTWDPQIPHIGIDVNSVISTKTVP-----------FTLDNGGIANV 162
Query: 206 WIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSASTG- 264
            I YD   ++++V +   +     +                      E++ VGFSA+TG 
Sbjct: 163 VIKYDASTKILHVVLVFPSLGTIYTI----------ADIVDLKQVLPESVNVGFSAATGD 212
Query: 265 ------RKVSSHFILGWSFS 278
                     +H IL WSFS
Sbjct: 213 PSGKQRNATETHDILSWSFS 232

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 44/271 (16%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHL 405
           F + + IG G FGEVYKG+     +E  A                  EI  L +    ++
Sbjct: 21  FTKLDRIGKGSFGEVYKGI-DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD---NENFVLSWEQRFNIIKGIAAGLLYLH 462
               G   +   L ++ +Y+  GS   LL      E ++ +      I++ I  GL YLH
Sbjct: 80  TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIAT------ILREILKGLDYLH 133
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
            E +   IHRD+K+ NVL+    + +L DFG+A      +I      VGT  ++APE+ +
Sbjct: 134 SERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX-FVGTPFWMAPEVIK 189
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
                   D+++ G+  +E+A G  P +SD            H  +VL ++  N   +  
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEPP-NSD-----------LHPMRVLFLIPKNSPPTLE 237
Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
               +   +    C ++    RPT +++L++
Sbjct: 238 GQHSKPFKEFVEACLNKDPRFRPTAKELLKH 268

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 31/257 (12%)
Query: 370 IGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C R
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           +    ++ +++  G+L   L +     ++      +   I++ + YL +   +  IHR++
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRNL 383
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + N L+  +   ++ DFGL+RL      +        I + APE     K S  +DV+A
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 443
Query: 535 YGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLG 593
           +GVLL EIAT G  P     +  +D       L QV ++++ +          E V +L 
Sbjct: 444 FGVLLWEIATYGMSP-----YPGID-------LSQVYELLEKDYRMERPEGCPEKVYELM 491
Query: 594 LLCSHQKAEARPTMRQV 610
             C       RP+  ++
Sbjct: 492 RACWQWNPSDRPSFAEI 508

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 126/271 (46%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ +L    
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLAS-- 210
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDH--GKISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR ++D     + + T     + ++A E  +
Sbjct: 211 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 324
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 325 --------LYEVMLKCWHPKAEMRPSFSELV 347

>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 110/260 (42%), Gaps = 47/260 (18%)
Query: 32  FNETKTNQGLITRERASILKPSGALRLTDNAH-----NVIGHAFYNKPIQMLDKSTSLSS 86
           FN+   N+  +  +R + +  +  L LT   +     N  G A Y KP+Q+ D +T    
Sbjct: 8   FNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTG--- 64
Query: 87  KPNASSFSTCFVFQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSN 145
             N +SF T F F I  P        GL F ++P P+   G+   Y GI N  + +    
Sbjct: 65  --NVASFETRFSFSIRQPFPRPHPADGLVFFIAP-PNTQTGEGGGYFGIYNPLSPYP--- 118
Query: 146 HLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQA 205
              A+EFDT   +  T D Q  H+GI+VNS+ S K  P           FTL++G     
Sbjct: 119 -FVAVEFDT---FRNTWDPQIPHIGIDVNSVISTKTVP-----------FTLDNGGIANV 163
Query: 206 WIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSASTG- 264
            I YD   ++++V +   +     +                      E++ VGFSA+TG 
Sbjct: 164 VIKYDASTKILHVVLVFPSLGTIYTI----------ADIVDLKQVLPESVNVGFSAATGD 213
Query: 265 ------RKVSSHFILGWSFS 278
                     +H IL WSFS
Sbjct: 214 PSGKQRNATETHDILSWSFS 233

>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 46/274 (16%)
Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLDK 80
           F +N F   + N  L   +  +I+  SG L+L     N       +G A Y+ PI + DK
Sbjct: 6   FSWNKFVPKQPNMIL---QGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDK 62
Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
            T      + +SF+  F F    P++ +   GLAF ++P  + P   A  YLG+ N   +
Sbjct: 63  ETG-----SVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHA-GYLGLFN---E 113
Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
           ++  + + A+EFDT   +  + D    H+GINVNS++SIK              + L + 
Sbjct: 114 NESGDQVVAVEFDT---FRNSWDPPNPHIGINVNSIRSIK-----------TTSWDLANN 159
Query: 201 DPVQAWIDYDG-VNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGF 259
              +  I YD   + LV   + P  + + +                    +  E + +GF
Sbjct: 160 KVAKVLITYDASTSLLVASLVYPSQRTSNI-----------LSDVVDLKTSLPEWVRIGF 208
Query: 260 SASTGRKV--SSHFILGWSFSMNGAAPSLNLSQI 291
           SA+TG  +   SH +L WSF+ N    S N+  +
Sbjct: 209 SAATGLDIPGESHDVLSWSFASNLPHASSNIDPL 242

>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 110/260 (42%), Gaps = 47/260 (18%)
Query: 32  FNETKTNQGLITRERASILKPSGALRLTDNAH-----NVIGHAFYNKPIQMLDKSTSLSS 86
           FN+   N+  +  +R + +  +  L LT   +     N  G A Y KP+Q+ D +T    
Sbjct: 7   FNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTG--- 63
Query: 87  KPNASSFSTCFVFQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSN 145
             N +SF T F F I  P        GL F ++P P+   G+   Y GI N  + +    
Sbjct: 64  --NVASFETRFSFSIRQPFPRPHPADGLVFFIAP-PNTQTGEGGGYFGIYNPLSPYP--- 117
Query: 146 HLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQA 205
              A+EFDT   +  T D Q  H+GI+VNS+ S K  P           FTL++G     
Sbjct: 118 -FVAVEFDT---FRNTWDPQIPHIGIDVNSVISTKTVP-----------FTLDNGGIANV 162
Query: 206 WIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSASTG- 264
            I YD   ++++V +   +     +                      E++ VGFSA+TG 
Sbjct: 163 VIKYDASTKILHVVLVFPSLGTIYTI----------ADIVDLKQVLPESVNVGFSAATGD 212
Query: 265 ------RKVSSHFILGWSFS 278
                     +H IL WSFS
Sbjct: 213 PSGKQRNATETHDILSWSFS 232

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 29/202 (14%)
Query: 362 KGFKQSEVIGTGGFGEVY------------KGVLPTRM--REFAAEIESLGRLRHKHLVN 407
           +  K  + +G G FGEV+            K + P  M    F AE   +  L+H  LV 
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L      K  + ++ +++  GSL   L  +E       +  +    IA G+ ++ +   +
Sbjct: 242 LHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---R 297
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
             IHRD+++ N+L+ A +  ++ DFGLAR+               I + APE    G  +
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFT 347
Query: 528 CSTDVFAYGVLLLEIAT-GRRP 548
             +DV+++G+LL+EI T GR P
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIP 369

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 56/289 (19%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPT----------RM---------REFAAEIESLGRL-RHK 403
            K  +VIG G FG+V K  +            RM         R+FA E+E L +L  H 
Sbjct: 27  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF--------------VLSWEQRFN 449
           +++NL G C+ +  L L  +Y P+G+L   L  +                  LS +Q  +
Sbjct: 87  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
               +A G+ YL +   +  IHRD+ + N+L+  +  A++ DFGL+R    G+  +    
Sbjct: 147 FAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKT 199
Query: 510 VG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
           +G   + ++A E       + ++DV++YGVLL EI + G  P     +  +     ++ L
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP-----YCGMTCAELYEKL 254
Query: 567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            Q   +  P       +   + V  L   C  +K   RP+  Q+L  LN
Sbjct: 255 PQGYRLEKP-------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 56/289 (19%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPT----------RM---------REFAAEIESLGRL-RHK 403
            K  +VIG G FG+V K  +            RM         R+FA E+E L +L  H 
Sbjct: 17  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 76
Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF--------------VLSWEQRFN 449
           +++NL G C+ +  L L  +Y P+G+L   L  +                  LS +Q  +
Sbjct: 77  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
               +A G+ YL +   +  IHRD+ + N+L+  +  A++ DFGL+R    G+  +    
Sbjct: 137 FAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKT 189
Query: 510 VG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
           +G   + ++A E       + ++DV++YGVLL EI + G  P     +  +     ++ L
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP-----YCGMTCAELYEKL 244
Query: 567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            Q   +  P       +   + V  L   C  +K   RP+  Q+L  LN
Sbjct: 245 PQGYRLEKP-------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 286

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ +L    
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLAS-- 151
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR     +     N  G    + ++A E  +
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 265
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSELV 288

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 36  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ +L    
Sbjct: 96  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLAS-- 152
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR     +     N  G    + ++A E  +
Sbjct: 153 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 266
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 267 --------LYEVMLKCWHPKAEMRPSFSELV 289

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 33  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ +L    
Sbjct: 93  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLAS-- 149
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR     +     N  G    + ++A E  +
Sbjct: 150 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 263
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 264 --------LYEVMLKCWHPKAEMRPSFSELV 286

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ +L    
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLAS-- 151
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR     +     N  G    + ++A E  +
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 265
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSELV 288

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 40  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ +L    
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLAS-- 156
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR     +     N  G    + ++A E  +
Sbjct: 157 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 270
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 271 --------LYEVMLKCWHPKAEMRPSFSELV 293

>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 123/269 (45%), Gaps = 49/269 (18%)
Query: 23  QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVI------GHAFYNKPIQ 76
           ++  F+F+ F   + N  LI +  A ++  +G L+LT+   N +      G A Y+ PI 
Sbjct: 2   EETSFVFSKFKPLEPN--LILQGDA-LVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPIN 58
Query: 77  MLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFP--GGKAEHYLGI 134
           + D +T L      +SF+T F F I  PN      GLAF ++P  S P  GG    +LG+
Sbjct: 59  IWDSATGL-----VASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGG---GFLGL 110
Query: 135 LNSTNDHKPSNHLFAIEFDTVNGYNET--SDSQGNHVGINVNSMKSIKLEPAAYYENGTK 192
            +S      +    A+EFDT   Y  T  +D    H+G +VNS+ SIK            
Sbjct: 111 FDSAVSGS-TYQTVAVEFDT---YENTVFTDPPYTHIGFDVNSISSIK-----------T 155
Query: 193 EDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQ 252
             ++L +G+  +  I Y+   +L+  ++  +   +K SF                     
Sbjct: 156 VKWSLANGEAAKVLITYNSAVKLLVASL--VYPSSKTSFILAD--------IVDLSSVLP 205
Query: 253 ETMYVGFSASTGR---KVSSHFILGWSFS 278
           E + VGFSA+TG    K+ +H +  WSF+
Sbjct: 206 EWVRVGFSAATGASGGKIETHDVFSWSFA 234

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 43/271 (15%)
Query: 367 SEVIGTGGFGEVYKG-VLPTRMREFAAEIESLGRL-------------------RHKHLV 406
           +EVIG G FG VY G +L    ++    ++SL R+                    H +++
Sbjct: 36  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 407 NLQGWCKRKR-DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C R     L+V  Y+ +G L + +  NE    + +        +A G+ +L    
Sbjct: 96  SLLGICLRSEGSPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLAS-- 152
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR     +     N  G    + ++A E  +
Sbjct: 153 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 266
Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                   + ++ L C H KAE RP+  +++
Sbjct: 267 --------LYEVMLKCWHPKAEMRPSFSELV 289

>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 44/213 (20%)
Query: 17  IAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQ 76
           I      +   IF G        G  T+ER         L LT    N +G A Y+ PI 
Sbjct: 8   ITKFGPDQPNLIFQG-------DGYTTKER---------LTLTKAVRNTVGRALYSSPIH 51
Query: 77  MLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYLG 133
           + D  T      N ++F T F F I  PNS     G  F ++P   +P   GG    YLG
Sbjct: 52  IWDSKTG-----NVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGG----YLG 102
Query: 134 ILNSTNDHKPSNHLFAIEFDTVNGYNETSD-SQGN-HVGINVNSMKSIKLEPAAYYENGT 191
           + NS  D+  ++   A+EFDT   YN   D S G+ H+GI+VNS+KSI  +  A      
Sbjct: 103 VFNS-KDYDKTSQTVAVEFDTF--YNTAWDPSNGDRHIGIDVNSIKSINTKSWA------ 153
Query: 192 KEDFTLESGDPVQAWIDYDGVNRLVNVTICPMN 224
                L++G      I ++G   ++ V++   N
Sbjct: 154 -----LQNGKEANVVIAFNGATNVLTVSLTYPN 181

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 42/225 (18%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHLVNLQGW 411
           E+   G FG V+K  L   M +F A                EI S   ++H++L+     
Sbjct: 21  EIKARGRFGCVWKAQL---MNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAA 77
Query: 412 CKR----KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE--W 465
            KR    + +L L+  +   GSL   L  N   +++W +  ++ + ++ GL YLHE+  W
Sbjct: 78  EKRGSNLEVELWLITAFHDKGSLTDYLKGN---IITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 466 ------EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAP 518
                 +  + HRD KS NVL+ +D+ A L DFGLA  F+ GK    T+  VGT  Y+AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 519 ELARTG-----KASCSTDVFAYGVLLLEIATGRRPIDS--DHFIL 556
           E+          A    D++A G++L E+ +  +  D   D ++L
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYML 239

>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 81/174 (46%), Gaps = 33/174 (18%)
Query: 17  IAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQ 76
           I      ++  IF G        G  T+ER         L LT    N +G A Y+ PI 
Sbjct: 8   ITKFGPDQQNLIFQG-------DGYTTKER---------LTLTKAVRNTVGRALYSSPIH 51
Query: 77  MLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYLG 133
           + D  T      N ++F T F F I  PNS     G  F ++P   +P   GG    YLG
Sbjct: 52  IWDSKTG-----NVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGG----YLG 102
Query: 134 ILNSTNDHKPSNHLFAIEFDTVNGYNETSD-SQGN-HVGINVNSMKSIKLEPAA 185
           + NS  D+  ++   A+EFDT   YN   D S G+ H+GI+VNS+KSI  +  A
Sbjct: 103 VFNS-KDYDKTSQTVAVEFDTF--YNTAWDPSNGDRHIGIDVNSIKSINTKSWA 153

>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 17  IAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQ 76
           I      ++  IF G        G  T+ER         L LT    N +G A Y+ PI 
Sbjct: 8   ITKFGPDQQNLIFQG-------DGYTTKER---------LTLTKAVRNTVGRALYSSPIH 51
Query: 77  MLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYLG 133
           + D  T      N ++F T F F I  PNS     G  F ++P   +P   GG    YLG
Sbjct: 52  IWDSKTG-----NVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGG----YLG 102
Query: 134 ILNSTNDHKPSNHLFAIEFDTVNGYNETSD-SQGN-HVGINVNSMKSIKLE 182
           + NS  D+  ++   A+EFDT   YN   D S G+ H+GI+VNS+KSI  +
Sbjct: 103 VFNS-KDYDKTSQTVAVEFDTF--YNTAWDPSNGDRHIGIDVNSIKSINTK 150

>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 44/213 (20%)
Query: 17  IAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQ 76
           I      +   IF G        G  T+ER         L LT    N +G A Y+ PI 
Sbjct: 8   ITKFGPDQPNLIFQG-------DGYTTKER---------LTLTKAVRNTVGRALYSSPIH 51
Query: 77  MLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYLG 133
           + D  T      N ++F T F F I  PNS     G  F ++P   +P   GG    YLG
Sbjct: 52  IWDSKTG-----NVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGG----YLG 102
Query: 134 ILNSTNDHKPSNHLFAIEFDTVNGYNETSD-SQGN-HVGINVNSMKSIKLEPAAYYENGT 191
           + NS  D+  ++   A+EFDT   YN   D S G+ H+GI+VNS+KSI            
Sbjct: 103 VFNS-KDYDKTSQTVAVEFDTF--YNTAWDPSNGDRHIGIDVNSIKSINT---------- 149
Query: 192 KEDFTLESGDPVQAWIDYDGVNRLVNVTICPMN 224
            + + L++G      I ++G   ++ V++   N
Sbjct: 150 -KSWKLQNGKEANVVIAFNGATNVLTVSLTYPN 181

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 25/244 (10%)
Query: 385 TRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF------DNE 438
           T M E   EI+++ +  H ++V+       K +L LV   +  GS+  ++       +++
Sbjct: 55  TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHK 114
Query: 439 NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           + VL       I++ +  GL YLH+  +   IHRDVK+GN+L+  D + ++ DFG++   
Sbjct: 115 SGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL 171
Query: 499 DHG------KISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDS 551
             G      K+  T   VGT  ++APE+    +      D++++G+  +E+ATG  P   
Sbjct: 172 ATGGDITRNKVRKT--FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
Query: 552 DHFILVDWVLEFQHLGQVLD--VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
              + V  +L  Q+    L+  V D  +   Y  +  +++     LC  +  E RPT  +
Sbjct: 230 YPPMKV-LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMI----SLCLQKDPEKRPTAAE 284
Query: 610 VLRY 613
           +LR+
Sbjct: 285 LLRH 288

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 113/274 (41%), Gaps = 34/274 (12%)
Query: 358 YTATKGFKQSEVIGTGGFGEVYKGV-----LPTRMREFA--------------AEIESLG 398
           Y     F+  + IG G F EVY+       +P  +++                 EI+ L 
Sbjct: 28  YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLK 87
Query: 399 RLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAA 456
           +L H +++          +L +V +    G L  ++  F  +  ++     +     + +
Sbjct: 88  QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
            L ++H    + V+HRD+K  NV I A    +LGD GL R F   K +   ++VGT  Y+
Sbjct: 148 ALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYM 203
Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN 576
           +PE       +  +D+++ G LL E+A  + P   D   L     + +          P 
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY------PP 257
Query: 577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQV 610
           L S +   E+    QL  +C +   E RP +  V
Sbjct: 258 LPSDHYSEELR---QLVNMCINPDPEKRPDVTYV 288

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 25/244 (10%)
Query: 385 TRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF------DNE 438
           T M E   EI+++ +  H ++V+       K +L LV   +  GS+  ++       +++
Sbjct: 50  TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHK 109
Query: 439 NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF 498
           + VL       I++ +  GL YLH+  +   IHRDVK+GN+L+  D + ++ DFG++   
Sbjct: 110 SGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL 166
Query: 499 DHG------KISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDS 551
             G      K+  T   VGT  ++APE+    +      D++++G+  +E+ATG  P   
Sbjct: 167 ATGGDITRNKVRKT--FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224
Query: 552 DHFILVDWVLEFQHLGQVLD--VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
              + V  +L  Q+    L+  V D  +   Y  +  +++     LC  +  E RPT  +
Sbjct: 225 YPPMKV-LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMI----SLCLQKDPEKRPTAAE 279
Query: 610 VLRY 613
           +LR+
Sbjct: 280 LLRH 283

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 53/298 (17%)
Query: 370 IGTGGFGEVYKG-------------VLPTRMRE-----FAAEIESLGRLRHKHLVNLQGW 411
           IG G FGEV+K              VL    +E        EI+ L  L+H+++VNL   
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 412 CKRKRD--------LLLVYDYIPN---GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           C+ K          + LV+D+  +   G L ++L     F LS  +R  +++ +  GL Y
Sbjct: 86  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKR--VMQMLLNGLYY 140
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT---NVVGTIGYIA 517
           +H      ++HRD+K+ NVLI  D   +L DFGLAR F   K S      N V T+ Y  
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 518 PELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN 576
           PEL    +      D++  G ++ E+ T R PI   +       L  Q  G +   V PN
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLD-SQR 633
           + +  +  ++ELV          K + R    ++  Y+     L +ID    LD +QR
Sbjct: 257 VDNYELYEKLELV----------KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 304

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 33/213 (15%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLPTR-----MREFA------------AEIESLGRLR 401
           +++  FKQ E +G G +  VYKG+  T      ++E               EI  +  L+
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNG---SLDSLLFDNENFVLSWEQRFNIIK----GI 454
           H+++V L      +  L LV++++ N     +DS    N    L      N++K     +
Sbjct: 62  HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLE----LNLVKYFQWQL 117
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
             GL + HE     ++HRD+K  N+LI+     +LGDFGLAR F     + ++ VV T+ 
Sbjct: 118 LQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLW 173
Query: 515 YIAPELARTGKA-SCSTDVFAYGVLLLEIATGR 546
           Y AP++    +  S S D+++ G +L E+ TG+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206

>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 29/230 (12%)
Query: 67  GHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGG 126
           G A Y+ P+Q+ D  T      + +SF T F F +    +G    GLAF ++P P     
Sbjct: 50  GRALYSDPVQLWDNKTE-----SVASFYTEFTFFLKITGNGPAD-GLAFFLAP-PDSDVK 102
Query: 127 KAEHYLGILNSTNDHKPS-NHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAA 185
            A  YLG+ N +   +PS N + A+EFDT    N    S   H+GINVNS+ S+  +   
Sbjct: 103 DAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSY-RHIGINVNSIVSVATK--- 158
Query: 186 YYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXX 245
                  ED  + SG    A I YDG   ++ V +   +  + +  H             
Sbjct: 159 -----RWEDSDIFSGKIATARISYDGSAEILTVVLSYPDGSDYILSH-----------SV 202
Query: 246 XXXXAFQETMYVGFSASTG-RKVSSHFILGWSFSMNGAAPSLNLSQIPSL 294
                  E++ VG SASTG  +  + +IL W FS N  + S+  +  P +
Sbjct: 203 DMRQNLPESVRVGISASTGNNQFLTVYILSWRFSSNLQSTSVKAAMEPEI 252

>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 29/230 (12%)
Query: 67  GHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGG 126
           G A Y+ P+Q+ D  T      + +SF T F F +    +G    GLAF ++P P     
Sbjct: 50  GRALYSDPVQLWDNKTE-----SVASFYTEFTFFLKITGNGPAD-GLAFFLAP-PDSDVK 102
Query: 127 KAEHYLGILNSTNDHKPS-NHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAA 185
            A  YLG+ N +   +PS N + A+EFDT    N    S   H+GINVNS+ S+  +   
Sbjct: 103 DAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSY-RHIGINVNSIVSVATK--- 158
Query: 186 YYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXX 245
                  ED  + SG    A I YDG   ++ V +   +  + +  H             
Sbjct: 159 -----RWEDSDIFSGKIATARISYDGSAEILTVVLSYPDGSDYILSH-----------SV 202
Query: 246 XXXXAFQETMYVGFSASTG-RKVSSHFILGWSFSMNGAAPSLNLSQIPSL 294
                  E++ VG SASTG  +  + +IL W FS N  + S+  +  P +
Sbjct: 203 DMRQNLPESVRVGISASTGNNQFLTVYILSWRFSSNLQSTSVKAAMEPEI 252

>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 49/269 (18%)
Query: 23  QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQ 76
           ++  F+F+ F   + N  LI +  A ++  +G L+LT+   N       +G A Y+ PI 
Sbjct: 2   EETSFVFSKFKPLEPN--LILQGDA-LVTVAGVLQLTNVDSNGVPEPSSLGRATYSAPIN 58
Query: 77  MLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFP--GGKAEHYLGI 134
           + D +T L      +SF+T F F I  PN      GLAF ++P  S P  GG    +LG+
Sbjct: 59  IWDSATGL-----VASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGG---FLGL 110
Query: 135 LNSTNDHKPSNHLFAIEFDTVNGYNET--SDSQGNHVGINVNSMKSIKLEPAAYYENGTK 192
            +S      +    A+EFDT   Y  T  +D    H+G +VNS+ SIK            
Sbjct: 111 FDSAVGDT-TYQTVAVEFDT---YENTVFTDPPYTHIGFDVNSISSIK-----------T 155
Query: 193 EDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQ 252
             ++L +G+  +  I Y+   +L+  ++  +   +K SF                     
Sbjct: 156 VKWSLANGEAAKVLITYNSAVKLLVASL--VYPSSKTSFILAD--------IVDLSSVLP 205
Query: 253 ETMYVGFSASTGRK---VSSHFILGWSFS 278
           E + VGFSA+TG     + +H +  WSF+
Sbjct: 206 EWVRVGFSAATGASKGYIETHDVFSWSFA 234

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI  L  LRH H++ L        D+++V +Y   G L   + + +       +RF   +
Sbjct: 59  EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRF--FQ 115
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            I   + Y H      ++HRD+K  N+L+D ++N ++ DFGL+ +   G    T+   G+
Sbjct: 116 QIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGS 170
Query: 513 IGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
             Y APE+   GK  A    DV++ G++L  +  GR P D D FI
Sbjct: 171 PNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVGRLPFD-DEFI 213

>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 110/262 (41%), Gaps = 40/262 (15%)
Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTD------NAHNVIGHAFYNKPIQMLD 79
           E I   F+E +     +T + A+++  SG L+LT        A +  G   Y KP+ M D
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWD 61
Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQ-GGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
            +T        +SF T F F I  P +      GL F + P  S P  +   YLG+ N++
Sbjct: 62  STTG-----TVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPA-QGYGYLGVFNNS 115
Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                S    A+EFDT +  N     Q  H+GI+VNS++SIK +P           F L+
Sbjct: 116 KQDN-SYQTLAVEFDTFS--NPWDPPQVPHIGIDVNSIRSIKTQP-----------FQLD 161
Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVG 258
           +G      I YD  +++++V +           +                    + + VG
Sbjct: 162 NGQVANVVIKYDAPSKILHVVLV----------YPSSGAIYTIAEIVDVKQVLPDWVDVG 211
Query: 259 FSASTGRK---VSSHFILGWSF 277
            S +TG +     +H +  WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 81/172 (47%), Gaps = 33/172 (19%)
Query: 16  VIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPI 75
           +I   S  ++  IF G        G  T+E+         L LT    N +G A Y+ PI
Sbjct: 7   LITKFSPDQQNLIFQG-------DGYTTKEK---------LTLTKAVKNTVGRALYSSPI 50
Query: 76  QMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYL 132
            + D+ T      N ++F T F F I  PNS     G  F ++P   +P   GG    YL
Sbjct: 51  HIWDRETG-----NVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGG----YL 101
Query: 133 GILNSTNDHKPSNHLFAIEFDTVNGYNETSD--SQGNHVGINVNSMKSIKLE 182
           G+ NS  ++  +    A+EFDT   YN   D  ++  H+GI+VNS+KS+  +
Sbjct: 102 GVFNSA-EYDKTTETVAVEFDTF--YNAAWDPSNRDRHIGIDVNSIKSVNTK 150

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI  L  LRH H++ L    K K ++++V +Y  N   D ++  ++   +S ++     +
Sbjct: 63  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQ 119
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            I + + Y H      ++HRD+K  N+L+D  +N ++ DFGL+ +   G    T+   G+
Sbjct: 120 QIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGS 174
Query: 513 IGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSD 552
             Y APE+  +GK  A    DV++ GV+L  +   R P D +
Sbjct: 175 PNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215

>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 44/214 (20%)
Query: 16  VIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPI 75
           +I   S  ++  IF G        G  T+E+         L LT    N +G A Y+ PI
Sbjct: 7   LITKFSPDQQNLIFQG-------DGYTTKEK---------LTLTKAVKNTVGRALYSSPI 50
Query: 76  QMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYL 132
            + D+ T      N ++F T F F I  PNS     G  F ++P   +P   GG    YL
Sbjct: 51  HIWDRETG-----NVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGG----YL 101
Query: 133 GILNSTNDHKPSNHLFAIEFDTVNGYNETSD--SQGNHVGINVNSMKSIKLEPAAYYENG 190
           G+ NS  ++  +    A+EFDT   YN   D  ++  H+GI+VNS+KS+           
Sbjct: 102 GVFNSA-EYDKTTQTVAVEFDTF--YNAAWDPSNRDRHIGIDVNSIKSVN---------- 148
Query: 191 TKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMN 224
             + + L++G+     I ++    ++ V++   N
Sbjct: 149 -TKSWKLQNGEEANVVIAFNAATNVLTVSLTYPN 181

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 56/289 (19%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPT----------RM---------REFAAEIESLGRL-RHK 403
            K  +VIG G FG+V K  +            RM         R+FA E+E L +L  H 
Sbjct: 24  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 83
Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF--------------VLSWEQRFN 449
           +++NL G C+ +  L L  +Y P+G+L   L  +                  LS +Q  +
Sbjct: 84  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
               +A G+ YL    ++  IHR++ + N+L+  +  A++ DFGL+R    G+  +    
Sbjct: 144 FAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVKKT 196
Query: 510 VGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
           +G   + ++A E       + ++DV++YGVLL EI + G  P     +  +     ++ L
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP-----YCGMTCAELYEKL 251
Query: 567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            Q   +  P       +   + V  L   C  +K   RP+  Q+L  LN
Sbjct: 252 PQGYRLEKP-------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 293

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI  L  LRH H++ L    K K ++++V +Y  N   D ++  ++   +S ++     +
Sbjct: 64  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQ 120
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            I + + Y H      ++HRD+K  N+L+D  +N ++ DFGL+ +   G    T+   G+
Sbjct: 121 QIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGS 175
Query: 513 IGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSD 552
             Y APE+  +GK  A    DV++ GV+L  +   R P D +
Sbjct: 176 PNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 216

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI  L  LRH H++ L    K K ++++V +Y  N   D ++  ++   +S ++     +
Sbjct: 54  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQ 110
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            I + + Y H      ++HRD+K  N+L+D  +N ++ DFGL+ +   G    T+   G+
Sbjct: 111 QIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGS 165
Query: 513 IGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSD 552
             Y APE+  +GK  A    DV++ GV+L  +   R P D +
Sbjct: 166 PNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 206

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 46/221 (20%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNL 408
           F++  V+G G FG+V K       R +A               +E+  L  L H+++V  
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 409 -QGW------------CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
              W             K+K  L +  +Y  NG+L  L+  +EN     ++ + + + I 
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH-SENLNQQRDEYWRLFRQIL 126
Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA----RLFD---------HGK 502
             L Y+H    Q +IHRD+K  N+ ID   N ++GDFGLA    R  D          G 
Sbjct: 127 EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 503 ISHTTNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEI 542
             + T+ +GT  Y+A E L  TG  +   D+++ G++  E+
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224

>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 44/214 (20%)
Query: 16  VIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPI 75
           +I   S  ++  IF G        G  T+E+         L LT    N +G A Y+ PI
Sbjct: 7   LITKFSPDQQNLIFQG-------DGYTTKEK---------LTLTKAVKNTVGRALYSSPI 50
Query: 76  QMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYL 132
            + D+ T      N ++F T F F I  PNS     G  F ++P   +P   GG    YL
Sbjct: 51  HIWDRETG-----NVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGG----YL 101
Query: 133 GILNSTNDHKPSNHLFAIEFDTVNGYNETSD--SQGNHVGINVNSMKSIKLEPAAYYENG 190
           G+ NS  ++  +    A+EFDT   YN   D  ++  H+GI+VNS+KS+           
Sbjct: 102 GVFNSA-EYDKTTQTVAVEFDTF--YNAAWDPSNRDRHIGIDVNSIKSVNT--------- 149
Query: 191 TKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMN 224
             + + L++G+     I ++    ++ V++   N
Sbjct: 150 --KSWKLQNGEEANVVIAFNAATNVLTVSLTYPN 181

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI  L  LRH H++ L    K K ++++V +Y  N   D ++  ++   +S ++     +
Sbjct: 58  EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQ 114
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            I + + Y H      ++HRD+K  N+L+D  +N ++ DFGL+ +   G    T+   G+
Sbjct: 115 QIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGS 169
Query: 513 IGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSD 552
             Y APE+  +GK  A    DV++ GV+L  +   R P D +
Sbjct: 170 PNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 210

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 29/207 (14%)
Query: 364 FKQSEVIGTGGFGEVY--------------------KGVLPTRMR-EFAAEIESLGRLRH 402
           F+  +V+G G FG+V+                    K  L  R R     E + L  + H
Sbjct: 30  FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
             +V L    + +  L L+ D++  G L + L  ++  + + E     +  +A GL +LH
Sbjct: 90  PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELA 521
                 +I+RD+K  N+L+D + + +L DFGL++   DH K +++    GT+ Y+APE+ 
Sbjct: 148 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEVV 202
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
                S S D ++YGVL+ E+ TG  P
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLP 229

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 362 KGFKQSEVIGTGGFGEV----YKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQ 409
           K  K  + IG G FG+V    Y+G              + F AE   + +LRH +LV L 
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 410 G-WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
           G   + K  L +V +Y+  GSL   L      VL  +        +   + YL       
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NN 309
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLAR----LFDHGKISHTTNVVGTIGYIAPELARTG 524
            +HRD+ + NVL+  D  A++ DFGL +      D GK+         + + APE  R  
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP--------VKWTAPEALREK 361
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
           K S  +DV+++G+LL EI + GR P       L D V   +  G  +D  D    + Y V
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVPY--PRIPLKDVVPRVEK-GYKMDAPDGCPPAVYDV 418
Query: 584 AEMELVLQLGLLCSHQKAEARPT---MRQVLRYLNGDEL 619
            +          C H  A  RPT   +R+ L ++   EL
Sbjct: 419 MKN---------CWHLDAATRPTFLQLREQLEHIRTHEL 448

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 358 YTATKGFKQSEVIGTGGFGE-------------VYKGVLPTRM-----REFAAEIESLGR 399
           + + + + + + IG G FG+             V K +  +RM      E   E+  L  
Sbjct: 20  FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
           ++H ++V  +   +    L +V DY   G L   +   +  +   +Q  +    I   L 
Sbjct: 80  MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           ++H+   + ++HRD+KS N+ +  D   +LGDFG+AR+ +   +      +GT  Y++PE
Sbjct: 140 HVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPE 195
Query: 520 LARTGKASCSTDVFAYGVLLLEIAT 544
           +      +  +D++A G +L E+ T
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCT 220

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 53/298 (17%)
Query: 370 IGTGGFGEVYKG-------------VLPTRMRE-----FAAEIESLGRLRHKHLVNLQGW 411
           IG G FGEV+K              VL    +E        EI+ L  L+H+++VNL   
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 412 CKRKRD--------LLLVYDYIPN---GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           C+ K          + LV+D+  +   G L ++L     F LS  +R  +++ +  GL Y
Sbjct: 85  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKR--VMQMLLNGLYY 139
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT---NVVGTIGYIA 517
           +H      ++HRD+K+ NVLI  D   +L DFGLAR F   K S      N V T+ Y  
Sbjct: 140 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 518 PELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN 576
           PEL    +      D++  G ++ E+ T R PI   +       L  Q  G +   V PN
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPN 255
Query: 577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLD-SQR 633
           + +  +  ++ELV          K + R    ++  Y+     L +ID    LD +QR
Sbjct: 256 VDNYELYEKLELV----------KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 303

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 88
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 89  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +   + VGT  Y++PEL
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                AS S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 28/181 (15%)
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLD----------SLLFDN 437
           ++F  E E L  L+H+H+V   G C   R LL+V++Y+ +G L+           LL   
Sbjct: 88  QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 147
Query: 438 ENFV---LSWEQRFNIIKGIAAGLLY---LHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
           E+     L   Q   +   +AAG++Y   LH       +HRD+ + N L+   +  ++GD
Sbjct: 148 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGD 201
Query: 492 FGLARLF---DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRR 547
           FG++R     D+ ++   T +   I ++ PE     K +  +DV+++GV+L EI T G++
Sbjct: 202 FGMSRDIYSTDYYRVGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259
Query: 548 P 548
           P
Sbjct: 260 P 260

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 53/298 (17%)
Query: 370 IGTGGFGEVYKG-------------VLPTRMRE-----FAAEIESLGRLRHKHLVNLQGW 411
           IG G FGEV+K              VL    +E        EI+ L  L+H+++VNL   
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 412 CKRKRD--------LLLVYDYIPN---GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           C+ K          + LV+D+  +   G L ++L     F LS  +R  +++ +  GL Y
Sbjct: 86  CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKR--VMQMLLNGLYY 140
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT---NVVGTIGYIA 517
           +H      ++HRD+K+ NVLI  D   +L DFGLAR F   K S      N V T+ Y  
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 518 PELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN 576
           PEL    +      D++  G ++ E+ T R PI   +       L  Q  G +   V PN
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLD-SQR 633
           + +  +  ++ELV          K + R    ++  Y+     L +ID    LD +QR
Sbjct: 257 VDNYELYEKLELV----------KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 304

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 363 GFKQSEVIGTGGFGEVYKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           GF +   I      EV+ G +        P +  + + EI     L H+H+V   G+ + 
Sbjct: 29  GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 88
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
              + +V +     SL  L       +   E R+  ++ I  G  YLH      VIHRD+
Sbjct: 89  NDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VIHRDL 143
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
           K GN+ ++ D+  ++GDFGLA   ++      T + GT  YIAPE+      S   DV++
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWS 202
Query: 535 YGVLLLEIATGRRPIDS 551
            G ++  +  G+ P ++
Sbjct: 203 IGCIMYTLLVGKPPFET 219

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 363 GFKQSEVIGTGGFGEVYKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           GF +   I      EV+ G +        P +  + + EI     L H+H+V   G+ + 
Sbjct: 29  GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 88
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
              + +V +     SL  L       +   E R+  ++ I  G  YLH      VIHRD+
Sbjct: 89  NDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VIHRDL 143
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
           K GN+ ++ D+  ++GDFGLA   ++      T + GT  YIAPE+      S   DV++
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWS 202
Query: 535 YGVLLLEIATGRRPIDS 551
            G ++  +  G+ P ++
Sbjct: 203 IGCIMYTLLVGKPPFET 219

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 53/298 (17%)
Query: 370 IGTGGFGEVYKG-------------VLPTRMRE-----FAAEIESLGRLRHKHLVNLQGW 411
           IG G FGEV+K              VL    +E        EI+ L  L+H+++VNL   
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 412 CKRKRD--------LLLVYDYIPN---GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           C+ K          + LV+D+  +   G L ++L     F LS  +R  +++ +  GL Y
Sbjct: 86  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKR--VMQMLLNGLYY 140
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT---NVVGTIGYIA 517
           +H      ++HRD+K+ NVLI  D   +L DFGLAR F   K S      N V T+ Y  
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 518 PELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN 576
           PEL    +      D++  G ++ E+ T R PI   +       L  Q  G +   V PN
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLD-SQR 633
           + +  +  ++ELV          K + R    ++  Y+     L +ID    LD +QR
Sbjct: 257 VDNYELYEKLELV----------KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 304

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 363 GFKQSEVIGTGGFGEVYKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           GF +   I      EV+ G +        P +  + + EI     L H+H+V   G+ + 
Sbjct: 33  GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 92
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
              + +V +     SL  L       +   E R+  ++ I  G  YLH      VIHRD+
Sbjct: 93  NDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VIHRDL 147
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
           K GN+ ++ D+  ++GDFGLA   ++      T + GT  YIAPE+      S   DV++
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWS 206
Query: 535 YGVLLLEIATGRRPIDS 551
            G ++  +  G+ P ++
Sbjct: 207 IGCIMYTLLVGKPPFET 223

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 28/181 (15%)
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLD----------SLLFDN 437
           ++F  E E L  L+H+H+V   G C   R LL+V++Y+ +G L+           LL   
Sbjct: 65  QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
Query: 438 ENFV---LSWEQRFNIIKGIAAGLLY---LHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
           E+     L   Q   +   +AAG++Y   LH       +HRD+ + N L+   +  ++GD
Sbjct: 125 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGD 178
Query: 492 FGLARLF---DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRR 547
           FG++R     D+ ++   T +   I ++ PE     K +  +DV+++GV+L EI T G++
Sbjct: 179 FGMSRDIYSTDYYRVGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
Query: 548 P 548
           P
Sbjct: 237 P 237

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 28/181 (15%)
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLD----------SLLFDN 437
           ++F  E E L  L+H+H+V   G C   R LL+V++Y+ +G L+           LL   
Sbjct: 59  QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
Query: 438 ENFV---LSWEQRFNIIKGIAAGLLY---LHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
           E+     L   Q   +   +AAG++Y   LH       +HRD+ + N L+   +  ++GD
Sbjct: 119 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGD 172
Query: 492 FGLARLF---DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRR 547
           FG++R     D+ ++   T +   I ++ PE     K +  +DV+++GV+L EI T G++
Sbjct: 173 FGMSRDIYSTDYYRVGGRTML--PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
Query: 548 P 548
           P
Sbjct: 231 P 231

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDH 500
           ++ ++   +I      L + H+     +IHRDVK  N++I A    ++ DFG+AR + D 
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 501 G-KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW 559
           G  ++ T  V+GT  Y++PE AR       +DV++ G +L E+ TG  P   D  + V  
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-- 227
Query: 560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
              +QH+ +  D + P+     + A+++ V+
Sbjct: 228 --AYQHVRE--DPIPPSARHEGLSADLDAVV 254

>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 109/262 (41%), Gaps = 40/262 (15%)
Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTD------NAHNVIGHAFYNKPIQMLD 79
           E I   F+E +     +T + AS++  SG L+LT        A +  G   Y KP+ + D
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQ-GGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
            +T        +SF T F F I  P +      GL F + P  S P  +   YLGI N++
Sbjct: 62  MTTG-----TVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPA-QGYGYLGIFNNS 115
Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                S     +EFDT +  N+    Q  H+GI+VNS++SIK +P           F L+
Sbjct: 116 KQDN-SYQTLGVEFDTFS--NQWDPPQVPHIGIDVNSIRSIKTQP-----------FQLD 161
Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVG 258
           +G      I YD  ++L++  +           +                    E + VG
Sbjct: 162 NGQVANVVIKYDASSKLLHAVLV----------YPSSGAIYTIAEIVDVKQVLPEWVDVG 211
Query: 259 FSASTGRK---VSSHFILGWSF 277
            S +TG +     +H +  WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 36/252 (14%)
Query: 364 FKQSEVIGTGGFGEVYKG------------VL-------PTRMREFAAEIESLGRLRHKH 404
           ++  E++G GG  EV+              VL       P+    F  E ++   L H  
Sbjct: 14  YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 405 LVNL--QGWCKRKRDLL--LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +V +   G  +     L  +V +Y+   +L  ++  +    ++ ++   +I      L +
Sbjct: 74  IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNF 131
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHG-KISHTTNVVGTIGYIAP 518
            H+     +IHRDVK  N++I A    ++ DFG+AR + D G  ++ T  V+GT  Y++P
Sbjct: 132 SHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
           E AR       +DV++ G +L E+ TG  P   D  + V     +QH+ +  D + P+  
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV----AYQHVRE--DPIPPSAR 242
Query: 579 SSYVVAEMELVL 590
              + A+++ V+
Sbjct: 243 HEGLSADLDAVV 254

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 30/204 (14%)
Query: 364 FKQSEVIGTGGFGEVYKG-------VLPTRMREFAA----------EIESLGRLRHKHLV 406
           +++ E +G G +G VYK        V   R+R  A           EI  L  L H ++V
Sbjct: 23  YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR---FNIIKGIAAGLLYLHE 463
           +L      +R L LV++++    L  +L +N+  +   + +   + +++G+A    + H+
Sbjct: 83  SLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA----HCHQ 137
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LAR 522
                ++HRD+K  N+LI++D   +L DFGLAR F     S+T  VV T+ Y AP+ L  
Sbjct: 138 ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMG 193
Query: 523 TGKASCSTDVFAYGVLLLEIATGR 546
           + K S S D+++ G +  E+ TG+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDH 500
           ++ ++   +I      L + H+     +IHRDVK  N++I A    ++ DFG+AR + D 
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 501 G-KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW 559
           G  ++ T  V+GT  Y++PE AR       +DV++ G +L E+ TG  P   D  + V  
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-- 227
Query: 560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
              +QH+ +  D + P+     + A+++ V+
Sbjct: 228 --AYQHVRE--DPIPPSARHEGLSADLDAVV 254

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 30/204 (14%)
Query: 364 FKQSEVIGTGGFGEVYKG-------VLPTRMREFAA----------EIESLGRLRHKHLV 406
           +++ E +G G +G VYK        V   R+R  A           EI  L  L H ++V
Sbjct: 23  YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR---FNIIKGIAAGLLYLHE 463
           +L      +R L LV++++    L  +L +N+  +   + +   + +++G+A    + H+
Sbjct: 83  SLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA----HCHQ 137
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LAR 522
                ++HRD+K  N+LI++D   +L DFGLAR F     S+T  VV T+ Y AP+ L  
Sbjct: 138 ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMG 193
Query: 523 TGKASCSTDVFAYGVLLLEIATGR 546
           + K S S D+++ G +  E+ TG+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G +   L     F    EQR    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD---EQRTATYITELANAL 126
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 180
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 85
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 86  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +   + VGT  Y++PEL
Sbjct: 146 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 248

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 89
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 90  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +   + VGT  Y++PEL
Sbjct: 150 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 252

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDH 500
           ++ ++   +I      L + H+     +IHRDVK  N+LI A    ++ DFG+AR + D 
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADS 169
Query: 501 G-KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW 559
           G  +  T  V+GT  Y++PE AR       +DV++ G +L E+ TG  P   D  + V  
Sbjct: 170 GNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-- 227
Query: 560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
              +QH+ +  D + P+     + A+++ V+
Sbjct: 228 --AYQHVRE--DPIPPSARHEGLSADLDAVV 254

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 121
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T++ GT+ Y+ P
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPP 175
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 65
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 122
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T++ GT+ Y+ P
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPP 176
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212

>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 109/263 (41%), Gaps = 42/263 (15%)
Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTD------NAHNVIGHAFYNKPIQMLD 79
           E I   F+E +     +T + A+I+  SG L+LT        A +  G   Y KP+ + D
Sbjct: 2   ETISFSFSEFEPGNNDLTLQGAAIITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHIWD 61
Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQ-GGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
            +T        +SF T F F I  P +      GL F + P  S P  +   YLG+ N++
Sbjct: 62  MTTG-----TVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPA-QGYGYLGVFNNS 115
Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                S    A+EFDT +  N     Q  H+GI+VNS++SIK +P           F L+
Sbjct: 116 KQDN-SYQTLAVEFDTFS--NPWDPPQVPHIGIDVNSIRSIKTQP-----------FQLD 161
Query: 199 SGDPVQAWIDYDGVNR-LVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYV 257
           +G      I YD  ++ L+ V + P                              E + V
Sbjct: 162 NGQVANVVIKYDASSKILLAVLVYP-----------SSGAIYTIAEIVDVKQVLPEWVDV 210
Query: 258 GFSASTGRK---VSSHFILGWSF 277
           G S +TG +     +H +  WSF
Sbjct: 211 GLSGATGAQRDAAETHDVYSWSF 233

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 12  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 66
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 67  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 126
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 127 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 229

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 121
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T++ GT+ Y+ P
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPP 175
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           +   EIE L  L H+++V  +G C       + L+ +++P+GSL   L  N+N + + +Q
Sbjct: 69  DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI-NLKQ 127
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
           +      I  G+ YL     +  +HRD+ + NVL++++   ++GDFGL +  +  K   T
Sbjct: 128 QLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
Query: 507 T--NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              +    + + APE     K   ++DV+++GV L E+ T
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 39  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 93
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 94  LDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 154 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 256

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 90
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 91  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 147
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 148 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 201
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237

>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 47/291 (16%)
Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTD------NAHNVIGHAFYNKPIQMLD 79
           E I   F+E +     +T + A+++  SG L+LT        A +  G   Y KP+ + D
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQ-GGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
            +T        +SF T F F I  P +      GL F + P  S P  +   YLGI N++
Sbjct: 62  MTTG-----TVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPA-QGYGYLGIFNNS 115
Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                S     +EFDT +  N     Q  H+GI+VNS++SIK +P           F L+
Sbjct: 116 KQDN-SYQTLGVEFDTFS--NPWDPPQVPHIGIDVNSIRSIKTQP-----------FQLD 161
Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVG 258
           +G      I YD  +++++  +           +                    E + VG
Sbjct: 162 NGQVANVVIKYDASSKILHAVLV----------YPSSGAIYTIAEIVDVKQVLPEWVDVG 211
Query: 259 FSASTGRK---VSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSL 306
            S +TG +     +H +  WSF    + P  N + IP+     S+ N+F++
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF--QASLPETNDAVIPT-----SNHNTFAI 255

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 126
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T++ GT+ Y+ P
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPP 180
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           +   EIE L  L H+++V  +G C       + L+ +++P+GSL   L  N+N + + +Q
Sbjct: 57  DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI-NLKQ 115
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
           +      I  G+ YL     +  +HRD+ + NVL++++   ++GDFGL +  +  K   T
Sbjct: 116 QLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
Query: 507 T--NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
              +    + + APE     K   ++DV+++GV L E+ T
Sbjct: 173 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDH 500
           ++ ++   +I      L + H+     +IHRDVK  N++I A    ++ DFG+AR + D 
Sbjct: 130 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Query: 501 G-KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW 559
           G  ++ T  V+GT  Y++PE AR       +DV++ G +L E+ TG  P   D  + V  
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-- 244
Query: 560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
              +QH+ +  D + P+     + A+++ V+
Sbjct: 245 --AYQHVRE--DPIPPSARHEGLSADLDAVV 271

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 85
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 86  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 146 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 248

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 88
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 89  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 64
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 65  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 124
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 125 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 227

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 9   FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 63
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 64  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 123
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 124 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 226

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 11  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 65
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 66  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 125
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 126 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 228

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 121
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPP 175
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 89
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 90  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 150 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 252

>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 107/262 (40%), Gaps = 40/262 (15%)
Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTD------NAHNVIGHAFYNKPIQMLD 79
           E I   F+E +     +T + AS++  SG L+LT        A +  G   Y KP+ + D
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQ-GGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
            +T        +SF T F F I  P +      GL F + P  S P  +   YLGI N +
Sbjct: 62  MTTG-----TVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPA-QGYGYLGIFNQS 115
Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                S     +EFDT +  N     Q  H+GI+VNS++SIK +P           F L+
Sbjct: 116 KQDN-SYQTLGVEFDTFS--NPWDPPQVPHIGIDVNSIRSIKTQP-----------FQLD 161
Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVG 258
           +G      I YD  ++L++  +           +                    E + VG
Sbjct: 162 NGQVANVVIKYDASSKLLHAVLV----------YPSSGAIYTIAEIVDVKQVLPEWVDVG 211
Query: 259 FSASTGRK---VSSHFILGWSF 277
            S +TG +     +H +  WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 124
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 178
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 86
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 87  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 86
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 87  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 88
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 89  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 37  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 91
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 92  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 151
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 152 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 254

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 86
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 87  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 121
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 175
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 23  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 81
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 82  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 138
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 139 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 192
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 228

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 88
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 89  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 363 GFKQSEVIGTGGFGEVYKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           GF +   I      EV+ G +        P +  + + EI     L H+H+V   G+ + 
Sbjct: 51  GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 110
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
              + +V +     SL  L       +   E R+  ++ I  G  YLH      VIHRD+
Sbjct: 111 NDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VIHRDL 165
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
           K GN+ ++ D+  ++GDFGLA   ++        + GT  YIAPE+      S   DV++
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 224
Query: 535 YGVLLLEIATGRRPIDS 551
            G ++  +  G+ P ++
Sbjct: 225 IGCIMYTLLVGKPPFET 241

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 26/200 (13%)
Query: 370 IGTGGFGEVYKG------------VLPTR----MREFAAEIESLGRLRHKHLVNLQGWCK 413
           +G G FG+VYK             V+ T+    + ++  EIE L    H ++V L G   
Sbjct: 27  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
               L ++ ++ P G++D+++ + +   L+  Q   + + +   L +LH    + +IHRD
Sbjct: 87  HDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHS---KRIIHRD 142
Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE--LARTGKASC--- 528
           +K+GNVL+  + + RL DFG++   +   +    + +GT  ++APE  +  T K +    
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 529 STDVFAYGVLLLEIATGRRP 548
             D+++ G+ L+E+A    P
Sbjct: 202 KADIWSLGITLIEMAQIEPP 221

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 126
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 180
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 26/200 (13%)
Query: 370 IGTGGFGEVYKG------------VLPTR----MREFAAEIESLGRLRHKHLVNLQGWCK 413
           +G G FG+VYK             V+ T+    + ++  EIE L    H ++V L G   
Sbjct: 19  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
               L ++ ++ P G++D+++ + +   L+  Q   + + +   L +LH    + +IHRD
Sbjct: 79  HDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHS---KRIIHRD 134
Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE--LARTGKASC--- 528
           +K+GNVL+  + + RL DFG++   +   +    + +GT  ++APE  +  T K +    
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 529 STDVFAYGVLLLEIATGRRP 548
             D+++ G+ L+E+A    P
Sbjct: 194 KADIWSLGITLIEMAQIEPP 213

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 5   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 63
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 64  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 120
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 121 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 174
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 210

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 363 GFKQSEVIGTGGFGEVYKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           GF +   I      EV+ G +        P +  + + EI     L H+H+V   G+ + 
Sbjct: 53  GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 112
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
              + +V +     SL  L       +   E R+  ++ I  G  YLH      VIHRD+
Sbjct: 113 NDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VIHRDL 167
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
           K GN+ ++ D+  ++GDFGLA   ++        + GT  YIAPE+      S   DV++
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 226
Query: 535 YGVLLLEIATGRRPIDS 551
            G ++  +  G+ P ++
Sbjct: 227 IGCIMYTLLVGKPPFET 243

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 3   ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 61
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 62  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 118
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 119 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 172
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 208

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 119/277 (42%), Gaps = 40/277 (14%)
Query: 362 KGFKQSEVIGTGGFGEV----YKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQ 409
           K  K  + IG G FG+V    Y+G              + F AE   + +LRH +LV L 
Sbjct: 6   KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 410 G-WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
           G   + K  L +V +Y+  GSL   L      VL  +        +   + YL       
Sbjct: 66  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NN 122
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGKA 526
            +HRD+ + NVL+  D  A++ DFGL       K + +T   G   + + APE  R  K 
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLT------KEASSTQDTGKLPVKWTAPEALREKKF 176
Query: 527 SCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
           S  +DV+++G+LL EI + GR P       L D V   +  G  +D  D    + Y V +
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPY--PRIPLKDVVPRVEK-GYKMDAPDGCPPAVYEVMK 233
Query: 586 MELVLQLGLLCSHQKAEARPT---MRQVLRYLNGDEL 619
                     C H  A  RP+   +R+ L ++   EL
Sbjct: 234 N---------CWHLDAAMRPSFLQLREQLEHIKTHEL 261

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 16  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 70
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 71  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 130
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 131 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 233

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 363 GFKQSEVIGTGGFGEVYKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQGWCKR 414
           GF +   I      EV+ G +        P +  + + EI     L H+H+V   G+ + 
Sbjct: 27  GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 86
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
              + +V +     SL  L       +   E R+  ++ I  G  YLH      VIHRD+
Sbjct: 87  NDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VIHRDL 141
Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
           K GN+ ++ D+  ++GDFGLA   ++        + GT  YIAPE+      S   DV++
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 200
Query: 535 YGVLLLEIATGRRPIDS 551
            G ++  +  G+ P ++
Sbjct: 201 IGCIMYTLLVGKPPFET 217

>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 109/262 (41%), Gaps = 40/262 (15%)
Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTD------NAHNVIGHAFYNKPIQMLD 79
           E I   F+E +     +T + AS++  SG L+LT        A +  G   Y KP+ + D
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQ-GGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
            +T        +SF T F F I  P +      GL F + P  S P  +   YLGI N++
Sbjct: 62  MTTG-----TVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPA-QGGGYLGIFNNS 115
Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                S     +EFDT +  N+    Q  H+GI+VNS++SIK +P           F L+
Sbjct: 116 KQDN-SYQTLGVEFDTFS--NQWDPPQVPHIGIDVNSIRSIKTQP-----------FQLD 161
Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVG 258
           +G      I YD  +++++  +           +                    E + VG
Sbjct: 162 NGQVANVVIKYDASSKILHAVLV----------YPSSGAIYTIAEIVDVKQVLPEWVDVG 211
Query: 259 FSASTGRK---VSSHFILGWSF 277
            S +TG +     +H +  WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 10  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 68
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 69  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 125
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 126 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 179
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 215

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 124
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 178
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 65
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 122
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPP 176
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 119/277 (42%), Gaps = 40/277 (14%)
Query: 362 KGFKQSEVIGTGGFGEV----YKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQ 409
           K  K  + IG G FG+V    Y+G              + F AE   + +LRH +LV L 
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 410 G-WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
           G   + K  L +V +Y+  GSL   L      VL  +        +   + YL       
Sbjct: 81  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NN 137
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGKA 526
            +HRD+ + NVL+  D  A++ DFGL       K + +T   G   + + APE  R  K 
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLT------KEASSTQDTGKLPVKWTAPEALREKKF 191
Query: 527 SCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
           S  +DV+++G+LL EI + GR P       L D V   +  G  +D  D    + Y V +
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVPY--PRIPLKDVVPRVEK-GYKMDAPDGCPPAVYEVMK 248
Query: 586 MELVLQLGLLCSHQKAEARPT---MRQVLRYLNGDEL 619
                     C H  A  RP+   +R+ L ++   EL
Sbjct: 249 N---------CWHLDAAMRPSFLQLREQLEHIKTHEL 276

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 369 VIGTGGFGEVYKG------------VLPTRMREFA----AEIESLGRLRHKHLVNLQGWC 412
           V+G G +G VY G             +P R   ++     EI     L+HK++V   G  
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI-IKGIAAGLLYLHEEWEQVVIH 471
                + +  + +P GSL +LL      +   EQ      K I  GL YLH+     ++H
Sbjct: 89  SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVH 145
Query: 472 RDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC-- 528
           RD+K  NVLI+      ++ DFG ++    G    T    GT+ Y+APE+   G      
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 529 STDVFAYGVLLLEIATGRRP 548
           + D+++ G  ++E+ATG+ P
Sbjct: 205 AADIWSLGCTIIEMATGKPP 224

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 357 LYTATKGFKQSEVIGTGGFGEVYK------------GVLPTR----MREFAAEIESLGRL 400
            YT +K    +E++G G FG+V+K             ++ TR      E   EI  + +L
Sbjct: 88  FYTVSK----TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
            H +L+ L    + K D++LV +Y+  G L   + D E++ L+       +K I  G+ +
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRH 202
Query: 461 LHEEWEQVVIHRDVKSGNVL-IDADMNA-RLGDFGLARLFDHGKISHTTNV-VGTIGYIA 517
           +H+ +   ++H D+K  N+L ++ D    ++ DFGLAR +   K      V  GT  ++A
Sbjct: 203 MHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNFGTPEFLA 256
Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           PE+      S  TD+++ GV+   + +G  P   D+
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 121
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPP 175
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 31/208 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 88
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 89  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRP 548
                A  S+D++A G ++ ++  G  P
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPP 233

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVL 442
           PT +++   E+  +  L H ++V L    + ++ L LV +Y   G + D L+        
Sbjct: 55  PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK 114
Query: 443 SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK 502
               +F   + I + + Y H+++   ++HRD+K+ N+L+D DMN ++ DFG +  F  G 
Sbjct: 115 EARAKF---RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN 168
Query: 503 ISHTTNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHF 554
              T    G+  Y APEL +  K      DV++ GV+L  + +G  P D  + 
Sbjct: 169 KLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 369 VIGTGGFGEVYKG------------VLPTRMREFA----AEIESLGRLRHKHLVNLQGWC 412
           V+G G +G VY G             +P R   ++     EI     L+HK++V   G  
Sbjct: 15  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI-IKGIAAGLLYLHEEWEQVVIH 471
                + +  + +P GSL +LL      +   EQ      K I  GL YLH+     ++H
Sbjct: 75  SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVH 131
Query: 472 RDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC-- 528
           RD+K  NVLI+      ++ DFG ++    G    T    GT+ Y+APE+   G      
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 529 STDVFAYGVLLLEIATGRRP 548
           + D+++ G  ++E+ATG+ P
Sbjct: 191 AADIWSLGCTIIEMATGKPP 210

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 46/221 (20%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNL 408
           F++  V+G G FG+V K       R +A               +E+  L  L H+++V  
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 409 -QGW------------CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
              W             K+K  L +  +Y  N +L  L+  +EN     ++ + + + I 
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH-SENLNQQRDEYWRLFRQIL 126
Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA----RLFD---------HGK 502
             L Y+H    Q +IHRD+K  N+ ID   N ++GDFGLA    R  D          G 
Sbjct: 127 EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 503 ISHTTNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEI 542
             + T+ +GT  Y+A E L  TG  +   D+++ G++  E+
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 22/192 (11%)
Query: 368 EVIGTGGFGEVYKGVL-----------------PTRMREFAAEIESLGRLRHKHLVNLQG 410
           E IG G FGEV+ G L                 P    +F  E   L +  H ++V L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            C +K+ + +V + +  G   + L   E   L  +    ++   AAG+ YL     +  I
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLES---KCCI 235
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT-IGYIAPELARTGKASCS 529
           HRD+ + N L+      ++ DFG++R    G  + +  +    + + APE    G+ S  
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 530 TDVFAYGVLLLE 541
           +DV+++G+LL E
Sbjct: 296 SDVWSFGILLWE 307

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 31/208 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F  V         RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 88
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 89  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRP 548
                A  S+D++A G ++ ++  G  P
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPP 233

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 22/192 (11%)
Query: 368 EVIGTGGFGEVYKGVL-----------------PTRMREFAAEIESLGRLRHKHLVNLQG 410
           E IG G FGEV+ G L                 P    +F  E   L +  H ++V L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            C +K+ + +V + +  G   + L   E   L  +    ++   AAG+ YL     +  I
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLES---KCCI 235
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT-IGYIAPELARTGKASCS 529
           HRD+ + N L+      ++ DFG++R    G  + +  +    + + APE    G+ S  
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 530 TDVFAYGVLLLE 541
           +DV+++G+LL E
Sbjct: 296 SDVWSFGILLWE 307

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 26/200 (13%)
Query: 370 IGTGGFGEVYKG------------VLPTR----MREFAAEIESLGRLRHKHLVNLQGWCK 413
           +G G FG+VYK             V+ T+    + ++  EI+ L    H ++V L     
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
            + +L ++ ++   G++D+++ + E   L+  Q   + K     L YLH+     +IHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLDALNYLHD---NKIIHRD 160
Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE--LARTGKA---SC 528
           +K+GN+L   D + +L DFG++   +   I    + +GT  ++APE  +  T K      
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAK-NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 529 STDVFAYGVLLLEIATGRRP 548
             DV++ G+ L+E+A    P
Sbjct: 220 KADVWSLGITLIEMAEIEPP 239

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 26/200 (13%)
Query: 370 IGTGGFGEVYKG------------VLPTR----MREFAAEIESLGRLRHKHLVNLQGWCK 413
           +G G FG+VYK             V+ T+    + ++  EI+ L    H ++V L     
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
            + +L ++ ++   G++D+++ + E   L+  Q   + K     L YLH+     +IHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLDALNYLHD---NKIIHRD 160
Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE--LARTGKA---SC 528
           +K+GN+L   D + +L DFG++   +   I    + +GT  ++APE  +  T K      
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAK-NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 529 STDVFAYGVLLLEIATGRRP 548
             DV++ G+ L+E+A    P
Sbjct: 220 KADVWSLGITLIEMAEIEPP 239

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLS 443
           PT +++   E+  +  L H ++V L    + ++ L L+ +Y   G +   L  +    + 
Sbjct: 52  PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MK 109
Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI 503
            ++  +  + I + + Y H+   + ++HRD+K+ N+L+DADMN ++ DFG +  F  G  
Sbjct: 110 EKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-- 164
Query: 504 SHTTNVVGTIGYIAPELARTGKASC-STDVFAYGVLLLEIATGRRPIDSDHF 554
                  G+  Y APEL +  K      DV++ GV+L  + +G  P D  + 
Sbjct: 165 GKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 216

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 29/207 (14%)
Query: 364 FKQSEVIGTGGFGEV-------------------YKGVLPTRMREFAAEIESLGRLRHKH 404
           F+    IG G FG+V                    K V    +R    E++ +  L H  
Sbjct: 17  FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LVNL    + + D+ +V D +  G L   L  N +F     + F  I  +   L YL   
Sbjct: 77  LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF--ICELVMALDYLQN- 133
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
             Q +IHRD+K  N+L+D   +  + DF +A +    + +  T + GT  Y+APE+  + 
Sbjct: 134 --QRIIHRDMKPDNILLDEHGHVHITDFNIAAML--PRETQITTMAGTKPYMAPEMFSSR 189
Query: 525 KA---SCSTDVFAYGVLLLEIATGRRP 548
           K    S + D ++ GV   E+  GRRP
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRP 216

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 126
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S  T + GT+ Y+ P
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPP 180
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E           D+++ GVL  E   G+ P +++ +
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDH 500
           ++ ++   +I      L + H+     +IHRDVK  N++I A    ++ DFG+AR + D 
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 501 G-KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW 559
           G  ++ T  V+GT  Y++PE AR       +DV++ G +L E+ TG  P   D    V  
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV-- 227
Query: 560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
              +QH+ +  D + P+     + A+++ V+
Sbjct: 228 --AYQHVRE--DPIPPSARHEGLSADLDAVV 254

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 360 ATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI---ESLGRLR--------------- 401
           + + F+    +GTG FG V+        R +A ++   E + RL+               
Sbjct: 4   SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 402 -HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
            H  ++ + G  +  + + ++ DYI  G L SLL  ++ F     + +     +   L Y
Sbjct: 64  THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY--AAEVCLALEY 121
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           LH    + +I+RD+K  N+L+D + + ++ DFG A+         T  + GT  YIAPE+
Sbjct: 122 LHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGTPDYIAPEV 174
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRP 548
             T   + S D +++G+L+ E+  G  P
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTP 202

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 34/235 (14%)
Query: 341 LEDWELDCPHRFRYSDLYTATK--------GFKQSEVIGTGGFGEVYK------------ 380
           LE+ ELD   R R     T  +         F++   +G G  G V+K            
Sbjct: 4   LEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR 63
Query: 381 -----GVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF 435
                 + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L 
Sbjct: 64  KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 123
Query: 436 DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA 495
                      + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++
Sbjct: 124 KAGRIPEQILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 179
Query: 496 -RLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
            +L D    S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 180 GQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 90
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 91  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 147
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S   ++ GT+ Y+ P
Sbjct: 148 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPP 201
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L + +   
Sbjct: 53  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIP 112
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDH 500
                + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D 
Sbjct: 113 EEILGKVSI--AVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 167
Query: 501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
              S   + VGT  Y+APE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 168 ---SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLV--NLQGWCKRKRDLLLV 421
           FK  +++G G F            RE+A +I     L  +H++  N   +  R+RD++  
Sbjct: 32  FKFGKILGEGSFSTTVLARELATSREYAIKI-----LEKRHIIKENKVPYVTRERDVMSR 86
Query: 422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIK------------------GIAAGLLYL 461
            D+     L     D+E   F LS+ +   ++K                   I + L YL
Sbjct: 87  LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPEL 520
           H +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +     VGT  Y++PEL
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILVDWVLEFQH 565
                A  S+D++A G ++ ++  G  P  + + +++   +++ ++
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLRHKH 404
           F+Q  V+G GGFGEV    +    + +A                    E + L ++  + 
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +V+L    + K  L LV   +  G L   ++          +       I  GL  LH E
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +++RD+K  N+L+D   + R+ D GLA     G+       VGT+GY+APE+ +  
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNE 360
Query: 525 KASCSTDVFAYGVLLLEIATGRRP 548
           + + S D +A G LL E+  G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 362 KGFKQSEVIGTGGFGEVYK------------GVLPTRM-------REFAAEIESLGRLRH 402
           K + +   +G GGF + Y+             V+P  M        + + EI     L +
Sbjct: 42  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+V   G+ +    + +V +     SL  L       V   E R+  ++    G+ YLH
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARY-FMRQTIQGVQYLH 159
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
                 VIHRD+K GN+ ++ DM+ ++GDFGLA   +        ++ GT  YIAPE+  
Sbjct: 160 NNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKDLCGTPNYIAPEVLC 215
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDS 551
               S   D+++ G +L  +  G+ P ++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 370 IGTGGFGEVYKG------------VLPTR----MREFAAEIESLGRLRHKHLVNLQGWCK 413
           +G G FG+VYK             V+ T+    + ++  EI+ L    H ++V L     
Sbjct: 45  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
            + +L ++ ++   G++D+++ + E   L+  Q   + K     L YLH+     +IHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLDALNYLHD---NKIIHRD 160
Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE--LARTGKA---SC 528
           +K+GN+L   D + +L DFG++   +   I      +GT  ++APE  +  T K      
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAK-NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 529 STDVFAYGVLLLEIATGRRP 548
             DV++ G+ L+E+A    P
Sbjct: 220 KADVWSLGITLIEMAEIEPP 239

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 362 KGFKQSEVIGTGGFGEVYK------------GVLPTRM-------REFAAEIESLGRLRH 402
           K + +   +G GGF + Y+             V+P  M        + + EI     L +
Sbjct: 26  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+V   G+ +    + +V +     SL  L       V   E R+  ++    G+ YLH
Sbjct: 86  PHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARY-FMRQTIQGVQYLH 143
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
                 VIHRD+K GN+ ++ DM+ ++GDFGLA   +        ++ GT  YIAPE+  
Sbjct: 144 NNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKDLCGTPNYIAPEVLC 199
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDS 551
               S   D+++ G +L  +  G+ P ++
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFET 228

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLRHKH 404
           F+Q  V+G GGFGEV    +    + +A                    E + L ++  + 
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +V+L    + K  L LV   +  G L   ++          +       I  GL  LH E
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +++RD+K  N+L+D   + R+ D GLA     G+       VGT+GY+APE+ +  
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNE 360
Query: 525 KASCSTDVFAYGVLLLEIATGRRP 548
           + + S D +A G LL E+  G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 58/313 (18%)
Query: 349 PHRFRYSDLYT------ATKGFKQSEVIGTGGFGEVYKGVLP--------TR-------- 386
           P  F  +D+Y       A +    S  +G G FG VY+GV          TR        
Sbjct: 6   PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 387 ---MRE---FAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD---- 436
              MRE   F  E   +      H+V L G   + +  L++ + +  G L S L      
Sbjct: 66  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 125
Query: 437 -NENFVL---SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF 492
              N VL   S  +   +   IA G+ YL+       +HRD+ + N ++  D   ++GDF
Sbjct: 126 MENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 182
Query: 493 GLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
           G+ R +++          +  + +++PE  + G  +  +DV+++GV+L EIAT   +P  
Sbjct: 183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242
Query: 551 SDHFILVDWVLEFQHLGQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMR 608
               +  + VL F   G +LD  D  P+           ++ +L  +C     + RP+  
Sbjct: 243 G---LSNEQVLRFVMEGGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFL 288
Query: 609 QVLRYLNGDELLP 621
           +++  +  +E+ P
Sbjct: 289 EIISSIK-EEMEP 300

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 362 KGFKQSEVIGTGGFGEVYK------------GVLPTRM-------REFAAEIESLGRLRH 402
           K + +   +G GGF + Y+             V+P  M        + + EI     L +
Sbjct: 42  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+V   G+ +    + +V +     SL  L       V   E R+  ++    G+ YLH
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARY-FMRQTIQGVQYLH 159
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
                 VIHRD+K GN+ ++ DM+ ++GDFGLA   +       T + GT  YIAPE+  
Sbjct: 160 NNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLC 215
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDS 551
               S   D+++ G +L  +  G+ P ++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 66
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 67  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 123
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ +FG +    H   S  T + GT+ Y+ P
Sbjct: 124 SYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPP 177
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 118/277 (42%), Gaps = 40/277 (14%)
Query: 362 KGFKQSEVIGTGGFGEV----YKGVL--------PTRMREFAAEIESLGRLRHKHLVNLQ 409
           K  K  + IG G FG+V    Y+G              + F AE   + +LRH +LV L 
Sbjct: 12  KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 410 G-WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
           G   + K  L +V +Y+  GSL   L      VL  +        +   + YL       
Sbjct: 72  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NN 128
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGKA 526
            +HRD+ + NVL+  D  A++ DFGL       K + +T   G   + + APE  R    
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLT------KEASSTQDTGKLPVKWTAPEALREAAF 182
Query: 527 SCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
           S  +DV+++G+LL EI + GR P       L D V   +  G  +D  D    + Y V +
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVPY--PRIPLKDVVPRVEK-GYKMDAPDGCPPAVYEVMK 239
Query: 586 MELVLQLGLLCSHQKAEARPT---MRQVLRYLNGDEL 619
                     C H  A  RP+   +R+ L ++   EL
Sbjct: 240 N---------CWHLDAAMRPSFLQLREQLEHIKTHEL 267

>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex Length = 182

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 40  GLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVF 99
           G  T+E+         L LT    N +G A Y+ PI + D  T      N + F+T F+F
Sbjct: 25  GYTTKEK---------LTLTKAVKNTVGRALYSLPIHIWDSETG-----NVADFTTTFIF 70
Query: 100 QIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVN 156
            I  PN      G  F ++P   +P   GG    YLG+ N   D+  +    A+EFDT  
Sbjct: 71  VIDAPNGYNVADGFTFFIAPVDTKPQTGGG----YLGVFNG-KDYDKTAQTVAVEFDTF- 124
Query: 157 GYNETSD-SQGN-HVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNR 214
            YN   D S G  H+GI+VN++KSI           + + + L++G+     I ++    
Sbjct: 125 -YNAAWDPSNGKRHIGIDVNTIKSI-----------STKSWNLQNGEEAHVAISFNATTN 172
Query: 215 LVNVTICPMN 224
           +++VT+   N
Sbjct: 173 VLSVTLLYPN 182

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 69
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G +   L     F    EQR    I  +A  L
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD---EQRTATYITELANAL 126
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S    + GT+ Y+ P
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPP 180
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 216

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 124
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S   ++ GT+ Y+ P
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPP 178
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 124
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ +FG +    H   S  T + GT+ Y+ P
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPP 178
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 38/212 (17%)
Query: 370 IGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLV 406
           IG GGFG V+KG L                         + +EF  E+  +  L H ++V
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G         +V +++P G L   L D  +  + W  +  ++  IA G+ Y+  +  
Sbjct: 87  KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQ-N 142
Query: 467 QVVIHRDVKSGNVLI-----DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
             ++HRD++S N+ +     +A + A++ DFGL++   H      + ++G   ++APE  
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS----VSGLLGNFQWMAPETI 198
Query: 522 RTGKASCS--TDVFAYGVLLLEIATGRRPIDS 551
              + S +   D +++ ++L  I TG  P D 
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDE 230

>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 40/262 (15%)
Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTD------NAHNVIGHAFYNKPIQMLD 79
           E I   F+E +     +T + A+++  SG L+LT        A +  G   Y KP+ + D
Sbjct: 2   ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWD 61
Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQ-GGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
            +T        +SF T F F I  P +      GL F + P  S P  +   YLGI N++
Sbjct: 62  MTTG-----TVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPA-QGYGYLGIFNNS 115
Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                S     +EFDT +  N     Q  H+GI+VNS++SIK +P           F L+
Sbjct: 116 KQDN-SYQTLGVEFDTFS--NPWDPPQVPHIGIDVNSIRSIKTQP-----------FQLD 161
Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVG 258
           +G      I YD  +++++  +           +                    E + VG
Sbjct: 162 NGQVANVVIKYDASSKILHAVLV----------YPSSGAIYTIAEIVDVKQVLPEWVDVG 211
Query: 259 FSASTGRK---VSSHFILGWSF 277
            S +TG +     +H +  WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           +++   E+  +  L H ++V L    + ++ L LV +Y   G +   L  +    +  ++
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
                + I + + Y H+++   ++HRD+K+ N+L+DADMN ++ DFG +  F  G    T
Sbjct: 115 ARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
Query: 507 TNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQ 564
               G+  Y APEL +  K      DV++ GV+L  + +G  P D  +   L + VL  +
Sbjct: 172 --FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
Query: 565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL--RYLN----GDE 618
           +               Y+  + E +L+  L+ +  K   R T+ Q++  R++N     DE
Sbjct: 230 YRIPF-----------YMSTDCENLLKKFLILNPSK---RGTLEQIMKDRWMNVGHEDDE 275
Query: 619 LLPIIDNWSSL-DSQRSEM 636
           L P ++      D +R+E+
Sbjct: 276 LKPYVEPLPDYKDPRRTEL 294

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           +++   E+  +  L H ++V L    + ++ L LV +Y   G +   L  +    +  ++
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
                + I + + Y H+++   ++HRD+K+ N+L+DADMN ++ DFG +  F  G    T
Sbjct: 115 ARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
Query: 507 TNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQ 564
               G+  Y APEL +  K      DV++ GV+L  + +G  P D  +   L + VL  +
Sbjct: 172 --FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
Query: 565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL--RYLN----GDE 618
           +               Y+  + E +L+  L+ +  K   R T+ Q++  R++N     DE
Sbjct: 230 YRIPF-----------YMSTDCENLLKKFLILNPSK---RGTLEQIMKDRWMNVGHEDDE 275
Query: 619 LLPIIDNWSSL-DSQRSEM 636
           L P ++      D +R+E+
Sbjct: 276 LKPYVEPLPDYKDPRRTEL 294

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 58/313 (18%)
Query: 349 PHRFRYSDLYT------ATKGFKQSEVIGTGGFGEVYKGVLP--------TR-------- 386
           P  F  +D+Y       A +    S  +G G FG VY+GV          TR        
Sbjct: 6   PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 387 ---MRE---FAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD---- 436
              MRE   F  E   +      H+V L G   + +  L++ + +  G L S L      
Sbjct: 66  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 125
Query: 437 -NENFVL---SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF 492
              N VL   S  +   +   IA G+ YL+       +HRD+ + N ++  D   ++GDF
Sbjct: 126 MANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 182
Query: 493 GLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
           G+ R +++          +  + +++PE  + G  +  +DV+++GV+L EIAT   +P  
Sbjct: 183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242
Query: 551 SDHFILVDWVLEFQHLGQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMR 608
               +  + VL F   G +LD  D  P+           ++ +L  +C     + RP+  
Sbjct: 243 G---LSNEQVLRFVMEGGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFL 288
Query: 609 QVLRYLNGDELLP 621
           +++  +  +E+ P
Sbjct: 289 EIISSIK-EEMEP 300

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 66
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 67  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 123
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S    + GT+ Y+ P
Sbjct: 124 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPP 177
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 213

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 57/303 (18%)
Query: 349 PHRFRYSDLYT------ATKGFKQSEVIGTGGFGEVYKGVLP--------TR-------- 386
           P  F  +D+Y       A +    S  +G G FG VY+GV          TR        
Sbjct: 28  PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 87
Query: 387 ---MRE---FAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD---- 436
              MRE   F  E   +      H+V L G   + +  L++ + +  G L S L      
Sbjct: 88  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 147
Query: 437 -NENFVL---SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF 492
              N VL   S  +   +   IA G+ YL+       +HRD+ + N ++  D   ++GDF
Sbjct: 148 MENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 204
Query: 493 GLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
           G+ R +++          +  + +++PE  + G  +  +DV+++GV+L EIAT   +P  
Sbjct: 205 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 264
Query: 551 SDHFILVDWVLEFQHLGQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMR 608
               +  + VL F   G +LD  D  P+           ++ +L  +C     + RP+  
Sbjct: 265 G---LSNEQVLRFVMEGGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFL 310
Query: 609 QVL 611
           +++
Sbjct: 311 EII 313

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L       
Sbjct: 62  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 121
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDH 500
                + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D 
Sbjct: 122 EQILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 176
Query: 501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH-----FI 555
              S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI S       F 
Sbjct: 177 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE 233
Query: 556 LVDWVL 561
           L+D+++
Sbjct: 234 LLDYIV 239

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 124/259 (47%), Gaps = 30/259 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           +++   E+  +  L H ++V L    + ++ L LV +Y   G +   L  +    +  ++
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
                + I + + Y H+++   ++HRD+K+ N+L+DADMN ++ DFG +  F  G  +  
Sbjct: 115 ARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKL 169
Query: 507 TNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQ 564
               G+  Y APEL +  K      DV++ GV+L  + +G  P D  +   L + VL  +
Sbjct: 170 DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
Query: 565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL--RYLN----GDE 618
           +               Y+  + E +L+  L+ +  K   R T+ Q++  R++N     DE
Sbjct: 230 YRIPF-----------YMSTDCENLLKKFLILNPSK---RGTLEQIMKDRWMNVGHEDDE 275
Query: 619 LLPIIDNWSSL-DSQRSEM 636
           L P ++      D +R+E+
Sbjct: 276 LKPYVEPLPDYKDPRRTEL 294

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 125/259 (48%), Gaps = 30/259 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           +++   E+  +  L H ++V L    + ++ L LV +Y   G +   L  +  ++   E 
Sbjct: 50  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-GWMKEKEA 108
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
           R    + I + + Y H+++   ++HRD+K+ N+L+DADMN ++ DFG +  F  G  +  
Sbjct: 109 RAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKL 162
Query: 507 TNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQ 564
               G+  Y APEL +  K      DV++ GV+L  + +G  P D  +   L + VL  +
Sbjct: 163 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 222
Query: 565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL--RYLN----GDE 618
           +               Y+  + E +L+  L+ +  K   R T+ Q++  R++N     DE
Sbjct: 223 YRIPF-----------YMSTDCENLLKKFLILNPSK---RGTLEQIMKDRWMNVGHEDDE 268
Query: 619 LLPIIDNWSSL-DSQRSEM 636
           L P ++      D +R+E+
Sbjct: 269 LKPYVEPLPDYKDPRRTEL 287

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 65
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 66  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 122
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S    + GT+ Y+ P
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPP 176
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 121
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S    + GT+ Y+ P
Sbjct: 122 SYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPP 175
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG-IAAGLLYLHE 463
           LV L    + +  L L+ DYI  G L + L   E F    E    I  G I   L +LH+
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQIYVGEIVLALEHLHK 177
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
                +I+RD+K  N+L+D++ +  L DFGL++ F   +     +  GTI Y+AP++ R 
Sbjct: 178 LG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 524 GKA--SCSTDVFAYGVLLLEIATGRRPIDSD 552
           G +    + D ++ GVL+ E+ TG  P   D
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLS 443
           PT +++   E+  +  L H ++V L    + ++ L L+ +Y   G +   L  +    + 
Sbjct: 55  PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MK 112
Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI 503
            ++  +  + I + + Y H+   + ++HRD+K+ N+L+DADMN ++ DFG +  F  G  
Sbjct: 113 EKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-- 167
Query: 504 SHTTNVVGTIGYIAPELARTGKASC-STDVFAYGVLLLEIATGRRPIDSDHF 554
                  G   Y APEL +  K      DV++ GV+L  + +G  P D  + 
Sbjct: 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 362 KGFKQSEVIGTGGFGEVYK------------GVLPTRM-------REFAAEIESLGRLRH 402
           K + +   +G GGF + Y+             V+P  M        + + EI     L +
Sbjct: 42  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+V   G+ +    + +V +     SL  L       V   E R+  ++    G+ YLH
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARY-FMRQTIQGVQYLH 159
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
                 VIHRD+K GN+ ++ DM+ ++GDFGLA   +         + GT  YIAPE+  
Sbjct: 160 NNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKXLCGTPNYIAPEVLC 215
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDS 551
               S   D+++ G +L  +  G+ P ++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 121
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S    + GT+ Y+ P
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPP 175
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 124
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S    + GT+ Y+ P
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPP 178
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 368 EVIGTGGFGEVYKGVL-----------------------PTRMREFAAEIESLGRLRHKH 404
           E +G   FG+VYKG L                       P R  EF  E     RL+H +
Sbjct: 32  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR-EEFRHEAMLRARLQHPN 90
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF-----------DNENFV---LSWEQRFNI 450
           +V L G   + + L +++ Y  +G L   L            D++  V   L      ++
Sbjct: 91  VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF---DHGKISHTT 507
           +  IAAG+ YL       V+H+D+ + NVL+   +N ++ D GL R     D+ K+    
Sbjct: 151 VAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL--LG 205
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
           N +  I ++APE    GK S  +D+++YGV+L E+
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 77  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFS 136
Query: 435 FD---NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
           F+   N    LS +   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 137 FNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 194 FGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 254 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 301
Query: 610 VLRYLNGDELLPIIDNWSSLD 630
           ++  L  D ++ +  N   LD
Sbjct: 302 LVEDL--DRIVALTSNQEXLD 320

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 364 FKQSEVIGTGGFGEVYKG---------------VLPTRMREFAAEIESLGRL-RHKHLVN 407
           F+  E++G G +G+VYKG               V      E   EI  L +   H+++  
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 408 LQGWCKRKR------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
             G   +K        L LV ++   GS+  L+ + +   L  E    I + I  GL +L
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H+     VIHRD+K  NVL+  +   +L DFG++   D   +      +GT  ++APE+ 
Sbjct: 146 HQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-TVGRRNTFIGTPYWMAPEVI 201
Query: 522 RTGKASCST-----DVFAYGVLLLEIATGRRPIDSDH 553
              +   +T     D+++ G+  +E+A G  P+   H
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 46/220 (20%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNL 408
           F++  V+G G FG+V K       R +A               +E+  L  L H+++V  
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 409 -QGW------------CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
              W             K+K  L +  +Y  N +L  L+  +EN     ++ + + + I 
Sbjct: 68  YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH-SENLNQQRDEYWRLFRQIL 126
Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH-------------GK 502
             L Y+H    Q +IHR++K  N+ ID   N ++GDFGLA+                 G 
Sbjct: 127 EALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 503 ISHTTNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLE 541
             + T+ +GT  Y+A E L  TG  +   D ++ G++  E
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 17  IAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQ 76
           I   S  ++  IF G        G  T+         G L LT    + +G A Y+ PI 
Sbjct: 8   ITKFSPDQQNLIFQG-------DGYTTK---------GKLTLTKAVKSTVGRALYSTPIH 51
Query: 77  MLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYLG 133
           + D+ T      N ++F T F F I  P+S     G  F ++P   +P   GG    YLG
Sbjct: 52  IWDRDTG-----NVANFVTSFTFVIDAPSSYNVADGFTFFIAPVDTKPQTGGG----YLG 102
Query: 134 ILNSTNDHKPSNHLFAIEFDTVNGYNETSD--SQGNHVGINVNSMKSIKLEPAAYYENGT 191
           + NS  ++  ++   A+EFDT   YN   D  ++  H+GI+VNS+KS+            
Sbjct: 103 VFNS-KEYDKTSQTVAVEFDTF--YNAAWDPSNKERHIGIDVNSIKSVNT---------- 149
Query: 192 KEDFTLESGDPVQAWIDYDGVNRLVNVTICPMN 224
            + + L++G+     I ++    ++ VT+   N
Sbjct: 150 -KSWNLQNGERANVVIAFNAATNVLTVTLTYPN 181

>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 108/255 (42%), Gaps = 40/255 (15%)
Query: 24  KEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTS 83
           +++ IF G     +N+ L   +  S   P G           +G A Y  PI++  +S+S
Sbjct: 15  QQDLIFQGDASVGSNKALQLTKVDSKGNPQGG---------SVGRALYTAPIRLW-QSSS 64
Query: 84  LSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKP 143
           L      +SF T F F I   +S        F  SP    P G     LG+  S+N+   
Sbjct: 65  L-----VASFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGS 119
Query: 144 SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPV 203
            N + ++EFDT     +  D    H+GI+VNS++S         +  +K D+  ++G   
Sbjct: 120 DNGVVSVEFDTYPN-TDIGDPNYRHIGIDVNSIRS---------KAASKWDW--QNGKTA 167
Query: 204 QAWIDYDGVN-RLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSAS 262
            A I Y+  + RL  V+  P +    +SF                       + VGFSA+
Sbjct: 168 TAHISYNSASKRLSVVSSYPNSSPVVVSFDV------------ELNNVXPXWVRVGFSAT 215
Query: 263 TGRKVSSHFILGWSF 277
           TG+   ++ IL WSF
Sbjct: 216 TGQYTQTNNILAWSF 230

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHLVNLQGW 411
           E +GTG FG V++         FAA                EI+++  LRH  LVNL   
Sbjct: 57  EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH 471
            +   +++++Y+++  G L   + D  N  +S ++    ++ +  GL ++H   E   +H
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMH---ENNYVH 172
Query: 472 RDVKSGNVLIDADMNARLG--DFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
            D+K  N++     +  L   DFGL    D  +    T   GT  + APE+A        
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYY 230
Query: 530 TDVFAYGVLLLEIATGRRP 548
           TD+++ GVL   + +G  P
Sbjct: 231 TDMWSVGVLSYILLSGLSP 249

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 67
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 68  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 124
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S    + GT+ Y+ P
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPP 178
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 360 ATKGFKQSEVIGTGGFGEVY-------KGVLPTRMREFAAEIESLG-------------R 399
           A + F+    +G G FG VY       K +L  ++  F A++E  G              
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-FKAQLEKAGVEHQLRREVEIQSH 64
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGL 458
           LRH +++ L G+      + L+ +Y P G++   L     F    EQR    I  +A  L
Sbjct: 65  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD---EQRTATYITELANAL 121
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +    H   S    + GT+ Y+ P
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPP 175
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
           E+          D+++ GVL  E   G+ P +++ +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           +++   E+  +  L H ++V L    + ++ L LV +Y   G +   L  +    +  ++
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
                + I + + Y H+++   ++HRD+K+ N+L+DADMN ++ DFG +  F  G    T
Sbjct: 115 ARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
Query: 507 TNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHF 554
               G+  Y APEL +  K      DV++ GV+L  + +G  P D  + 
Sbjct: 172 --FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHLVNLQGW 411
           E +GTG FG V++         FAA                EI+++  LRH  LVNL   
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH 471
            +   +++++Y+++  G L   + D  N  +S ++    ++ +  GL ++H   E   +H
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMH---ENNYVH 278
Query: 472 RDVKSGNVLIDADMNARLG--DFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
            D+K  N++     +  L   DFGL    D  +    T   GT  + APE+A        
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYY 336
Query: 530 TDVFAYGVLLLEIATGRRP 548
           TD+++ GVL   + +G  P
Sbjct: 337 TDMWSVGVLSYILLSGLSP 355

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 30/202 (14%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHLVNLQGW 411
           E +G+G FG V++ V     R F A                EI  + +L H  L+NL   
Sbjct: 57  EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDN---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            + K +++L+ +++  G     LFD    E++ +S  +  N ++    GL ++H   E  
Sbjct: 117 FEDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHS 169
Query: 469 VIHRDVKSGNVLIDADM--NARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
           ++H D+K  N++ +     + ++ DFGLA   +  +I   T    T  + APE+      
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT--TATAEFAAPEIVDREPV 227
Query: 527 SCSTDVFAYGVLLLEIATGRRP 548
              TD++A GVL   + +G  P
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSP 249

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 30/259 (11%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           +++   E+  +  L H ++V L    + ++ L LV +Y   G +   L  +    +  ++
Sbjct: 57  LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKE 114
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
                + I + + Y H+++   ++HRD+K+ N+L+DADMN ++ DFG +  F  G  +  
Sbjct: 115 ARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKL 169
Query: 507 TNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQ 564
               G   Y APEL +  K      DV++ GV+L  + +G  P D  +   L + VL  +
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 229
Query: 565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL--RYLN----GDE 618
           +               Y+  + E +L+  L+ +  K   R T+ Q++  R++N     DE
Sbjct: 230 YRIPF-----------YMSTDCENLLKKFLILNPSK---RGTLEQIMKDRWMNVGHEDDE 275
Query: 619 LLPIIDNWSSL-DSQRSEM 636
           L P ++      D +R+E+
Sbjct: 276 LKPYVEPLPDYKDPRRTEL 294

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 370 IGTGGFGEVY-------------KGVLPTRMR------EFAAEIESLGRLRHKHLVNLQG 410
           +G G FG VY             K +  T++       +   E+E    LRH +++ L G
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGLLYLHEEWEQVV 469
           +      + L+ +Y P G++   L     F    EQR    I  +A  L Y H    + V
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQKLSRFD---EQRTATYITELANALSYCHS---KRV 133
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+K  N+L+ ++   ++ DFG +    H   S  T + GT+ Y+ PE+         
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 530 TDVFAYGVLLLEIATGRRPIDSDHF 554
            D+++ GVL  E   G  P ++  +
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTY 215

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 42/213 (19%)
Query: 368 EVIGTGGFGEVYKGVL-----------------------PTRMREFAAEIESLGRLRHKH 404
           E +G   FG+VYKG L                       P R  EF  E     RL+H +
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR-EEFRHEAMLRARLQHPN 73
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF-----------DNENFV---LSWEQRFNI 450
           +V L G   + + L +++ Y  +G L   L            D++  V   L      ++
Sbjct: 74  VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNV 509
           +  IAAG+ YL       V+H+D+ + NVL+   +N ++ D GL R ++         N 
Sbjct: 134 VAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
           +  I ++APE    GK S  +D+++YGV+L E+
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 29/201 (14%)
Query: 369 VIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHLVNLQG 410
           ++G G FGEV K       +E+A                   E+E L +L H +++ L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      +V +    G L   +   + F  S      IIK + +G+ Y+H+     ++
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRF--SEHDAARIIKQVFSGITYMHK---HNIV 143
Query: 471 HRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
           HRD+K  N+L+++   D + ++ DFGL+  F     +   + +GT  YIAPE+ R G   
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 528 CSTDVFAYGVLLLEIATGRRP 548
              DV++ GV+L  + +G  P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 42/226 (18%)
Query: 358 YTATKGFKQS----EVIGTGGFGEVYKGVLPTRMREFAAEI----------ESLGRLR-- 401
           + A K F Q     +VIG G    V + V      EFA +I          E L  +R  
Sbjct: 86  WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 402 -------------HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
                        H H++ L    +    + LV+D +  G L   L   E   LS ++  
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETR 203
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN 508
           +I++ +   + +LH      ++HRD+K  N+L+D +M  RL DFG +   + G+      
Sbjct: 204 SIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--KLRE 258
Query: 509 VVGTIGYIAPELARTGKASC------STDVFAYGVLLLEIATGRRP 548
           + GT GY+APE+ +              D++A GV+L  +  G  P
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H  LV L    + +  L  V +Y+  G L  +        L  E        I+  L YL
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-VGTIGYIAPEL 520
           HE   + +I+RD+K  NVL+D++ + +L D+G+ +  +  +   TT+   GT  YIAPE+
Sbjct: 170 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEI 224
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPID 550
            R      S D +A GVL+ E+  GR P D
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 364 FKQSEVIGTGGFGEVY--------------------KGVLPTRMR-EFAAEIESLGRLRH 402
           F+  +V+G G FG+V+                    K  L  R R     E + L  + H
Sbjct: 26  FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
             +V L    + +  L L+ D++  G L + L  ++  + + E     +  +A  L +LH
Sbjct: 86  PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLH 143
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGYIAPELA 521
                 +I+RD+K  N+L+D + + +L DFGL++   DH K +++    GT+ Y+APE+ 
Sbjct: 144 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVV 198
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
                + S D +++GVL+ E+ TG  P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 364 FKQSEVIGTGGFGEV---YKGVLPTRM--------------REFAAEIESLGRLRHKHLV 406
           + Q + IG G +G V   Y  V  TR+              +    EI+ L R RH++++
Sbjct: 45  YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 407 NLQGWCKRK-----RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
            ++   +       RD+ +V D +    L  LL   +   LS +     +  I  GL Y+
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQ---LSNDHICYFLYQILRGLKYI 160
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD--HGKISHTTNVVGTIGYIAPE 519
           H      V+HRD+K  N+LI+   + ++ DFGLAR+ D  H      T  V T  Y APE
Sbjct: 161 HS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 520 LARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           +    K  + S D+++ G +L E+ + R      H++
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 116/265 (43%), Gaps = 39/265 (14%)
Query: 340 ILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI----E 395
           ILE  E   P   +   +    + F+  +VIG G FGEV    L    + FA +I    E
Sbjct: 52  ILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE 111
Query: 396 SLGR-----LRHKHLVNLQG---WC-------KRKRDLLLVYDYIPNGSLDSLLFDNENF 440
            L R      R +  V + G   W        +   +L LV DY   G L +LL   E+ 
Sbjct: 112 MLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR 171
Query: 441 VLSWEQRFNIIKGIAA--GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG-LARL 497
           +     RF + + + A   +  LH       +HRD+K  N+L+D + + RL DFG   +L
Sbjct: 172 LPEEMARFYLAEMVIAIDSVHQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKL 225
Query: 498 FDHGKISHTTNVVGTIGYIAPELART-----GKASCSTDVFAYGVLLLEIATGRRPIDSD 552
            + G +  +   VGT  YI+PE+ +      G+     D ++ GV + E+  G  P  ++
Sbjct: 226 MEDGTVQSSV-AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 553 HFI-----LVDWVLEFQHLGQVLDV 572
             +     +++    FQ   QV DV
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDV 309

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 118 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 177
Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                N    LS +   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 178 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 234
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 235 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 295 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 342
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 343 LVEDLD 348

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 77  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 136
Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                N    LS +   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 254 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 301
Query: 610 VLRYLNGDELLPIIDNWSSLD 630
           ++  L  D ++ +  N   LD
Sbjct: 302 LVEDL--DRIVALTSNQEYLD 320

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L       
Sbjct: 105 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 164
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDH 500
                + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D 
Sbjct: 165 EQILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 219
Query: 501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
              S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 220 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 25/199 (12%)
Query: 369 VIGTGGFGEV------------------YKGVLPTRMREFAAEIESLGRLRHKHLVNLQG 410
            IGTG +G                    Y  +     +   +E+  L  L+H ++V    
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 411 WC--KRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
               +    L +V +Y   G L S++     E   L  E    ++  +   L   H   +
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 467 --QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               V+HRD+K  NV +D   N +LGDFGLAR+ +H   S     VGT  Y++PE     
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKTFVGTPYYMSPEQMNRM 191
Query: 525 KASCSTDVFAYGVLLLEIA 543
             +  +D+++ G LL E+ 
Sbjct: 192 SYNEKSDIWSLGCLLYELC 210

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 29/201 (14%)
Query: 369 VIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHLVNLQG 410
           ++G G FGEV K       +E+A                   E+E L +L H +++ L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      +V +    G L   +   + F  S      IIK + +G+ Y+H+     ++
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRF--SEHDAARIIKQVFSGITYMHK---HNIV 143
Query: 471 HRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
           HRD+K  N+L+++   D + ++ DFGL+  F     +   + +GT  YIAPE+ R G   
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 528 CSTDVFAYGVLLLEIATGRRP 548
              DV++ GV+L  + +G  P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 29/201 (14%)
Query: 369 VIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHLVNLQG 410
           ++G G FGEV K       +E+A                   E+E L +L H +++ L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      +V +    G L   +   + F  S      IIK + +G+ Y+H+     ++
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRF--SEHDAARIIKQVFSGITYMHK---HNIV 143
Query: 471 HRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
           HRD+K  N+L+++   D + ++ DFGL+  F     +   + +GT  YIAPE+ R G   
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPEVLR-GTYD 200
Query: 528 CSTDVFAYGVLLLEIATGRRP 548
              DV++ GV+L  + +G  P
Sbjct: 201 EKCDVWSAGVILYILLSGTPP 221

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTT 507
            I   I   L +LH +    VIHRDVK  NVLI+A    ++ DFG++  L D   ++ T 
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDS--VAKTI 212
Query: 508 NVVGTIGYIA-----PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE 562
           +  G   Y+A     PEL + G  S  +D+++ G+ ++E+A  R P DS       W   
Sbjct: 213 D-AGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDS-------WGTP 263
Query: 563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
           FQ L QV++   P L +    AE    +     C  + ++ RPT  +++++
Sbjct: 264 FQQLKQVVEEPSPQLPADKFSAEF---VDFTSQCLKKNSKERPTYPELMQH 311

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L       
Sbjct: 43  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 102
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDH 500
                + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D 
Sbjct: 103 EQILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 157
Query: 501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
              S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L       
Sbjct: 43  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 102
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDH 500
                + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D 
Sbjct: 103 EQILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 157
Query: 501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
              S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L       
Sbjct: 43  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 102
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDH 500
                + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D 
Sbjct: 103 EQILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 157
Query: 501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
              S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 38/212 (17%)
Query: 370 IGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLV 406
           IG GGFG V+KG L                         + +EF  E+  +  L H ++V
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G         +V +++P G L   L D  +  + W  +  ++  IA G+ Y+  +  
Sbjct: 87  KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQ-N 142
Query: 467 QVVIHRDVKSGNVLI-----DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
             ++HRD++S N+ +     +A + A++ DFG ++   H      + ++G   ++APE  
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS----VSGLLGNFQWMAPETI 198
Query: 522 RTGKASCS--TDVFAYGVLLLEIATGRRPIDS 551
              + S +   D +++ ++L  I TG  P D 
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDE 230

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 356 DLYTATKGFKQSEVIGTGGFGEVYK-------------------------GVLPTRMREF 390
           D+ +  K +++ + +G G F  VYK                         G+  T +RE 
Sbjct: 4   DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE- 62
Query: 391 AAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
              I+ L  L H +++ L      K ++ LV+D++    L+ ++ DN + VL+       
Sbjct: 63  ---IKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDN-SLVLTPSHIKAY 117
Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV 510
           +     GL YLH+ W   ++HRD+K  N+L+D +   +L DFGLA+ F     ++   VV
Sbjct: 118 MLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 511 GTIGYIAPELARTGKA-SCSTDVFAYGVLLLEI 542
            T  Y APEL    +      D++A G +L E+
Sbjct: 175 -TRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 370 IGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLV 406
           IG GGFG V+KG L                         + +EF  E+  +  L H ++V
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G         +V +++P G L   L D  +  + W  +  ++  IA G+ Y+  +  
Sbjct: 87  KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQ-N 142
Query: 467 QVVIHRDVKSGNVLI-----DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
             ++HRD++S N+ +     +A + A++ DF L++   H      + ++G   ++APE  
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS----VSGLLGNFQWMAPETI 198
Query: 522 RTGKASCS--TDVFAYGVLLLEIATGRRPID 550
              + S +   D +++ ++L  I TG  P D
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFD 229

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 58/310 (18%)
Query: 352 FRYSDLYT------ATKGFKQSEVIGTGGFGEVYKGVLP--------TR----------- 386
           F  +D+Y       A +    S  +G G FG VY+GV          TR           
Sbjct: 3   FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 387 MRE---FAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NE 438
           MRE   F  E   +      H+V L G   + +  L++ + +  G L S L         
Sbjct: 63  MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 439 NFVL---SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA 495
           N VL   S  +   +   IA G+ YL+       +HRD+ + N ++  D   ++GDFG+ 
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 496 R-LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDH 553
           R +++          +  + +++PE  + G  +  +DV+++GV+L EIAT   +P     
Sbjct: 180 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 237
Query: 554 FILVDWVLEFQHLGQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
            +  + VL F   G +LD  D  P+           ++ +L  +C     + RP+  +++
Sbjct: 238 -LSNEQVLRFVMEGGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFLEII 285
Query: 612 RYLNGDELLP 621
             +  +E+ P
Sbjct: 286 SSIK-EEMEP 294

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H  LV L    + +  L  V +Y+  G L  +        L  E        I+  L YL
Sbjct: 80  HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPEL 520
           HE   + +I+RD+K  NVL+D++ + +L D+G+ +  +  +   TT+   GT  YIAPE+
Sbjct: 138 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEI 192
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPID 550
            R      S D +A GVL+ E+  GR P D
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 29/202 (14%)
Query: 370 IGTGGFGEVY-------KGVLPTRM------------REFAAEIESLGRLRHKHLVNLQG 410
           +G G FG VY       K ++  ++             +   EIE    LRH +++ +  
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGLLYLHEEWEQVV 469
           +   ++ + L+ ++ P G L   L  +  F    EQR    ++ +A  L Y HE   + V
Sbjct: 82  YFHDRKRIYLMLEFAPRGELYKELQKHGRFD---EQRSATFMEELADALHYCHE---RKV 135
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+K  N+L+      ++ DFG +    H        + GT+ Y+ PE+         
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 192
Query: 530 TDVFAYGVLLLEIATGRRPIDS 551
            D++  GVL  E   G  P DS
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDS 214

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 364 FKQSEVIGTGGFGEVY--------------------KGVLPTRMR-EFAAEIESLGRLRH 402
           F+  +V+G G FG+V+                    K  L  R R     E + L  + H
Sbjct: 27  FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
             +V L    + +  L L+ D++  G L + L  ++  + + E     +  +A  L +LH
Sbjct: 87  PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLH 144
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGYIAPELA 521
                 +I+RD+K  N+L+D + + +L DFGL++   DH K +++    GT+ Y+APE+ 
Sbjct: 145 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVV 199
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
                + S D +++GVL+ E+ TG  P
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLP 226

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H  LV L    + +  L  V +Y+  G L  +        L  E        I+  L YL
Sbjct: 65  HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPEL 520
           HE   + +I+RD+K  NVL+D++ + +L D+G+ +  +  +   TT+   GT  YIAPE+
Sbjct: 123 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEI 177
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPID 550
            R      S D +A GVL+ E+  GR P D
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 364 FKQSEVIGTGGFGEVY--------------------KGVLPTRMR-EFAAEIESLGRLRH 402
           F+  +V+G G FG+V+                    K  L  R R     E + L  + H
Sbjct: 26  FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
             +V L    + +  L L+ D++  G L + L  ++  + + E     +  +A  L +LH
Sbjct: 86  PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLH 143
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGYIAPELA 521
                 +I+RD+K  N+L+D + + +L DFGL++   DH K +++    GT+ Y+APE+ 
Sbjct: 144 S---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVV 198
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
                + S D +++GVL+ E+ TG  P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLP 225

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 29/202 (14%)
Query: 370 IGTGGFGEVY-------KGVLPTRM------------REFAAEIESLGRLRHKHLVNLQG 410
           +G G FG VY       K ++  ++             +   EIE    LRH +++ +  
Sbjct: 23  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGLLYLHEEWEQVV 469
           +   ++ + L+ ++ P G L   L  +  F    EQR    ++ +A  L Y HE   + V
Sbjct: 83  YFHDRKRIYLMLEFAPRGELYKELQKHGRFD---EQRSATFMEELADALHYCHE---RKV 136
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+K  N+L+      ++ DFG +    H        + GT+ Y+ PE+         
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 193
Query: 530 TDVFAYGVLLLEIATGRRPIDS 551
            D++  GVL  E   G  P DS
Sbjct: 194 VDLWCAGVLCYEFLVGMPPFDS 215

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L       
Sbjct: 43  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 102
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDH 500
                + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D 
Sbjct: 103 EQILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 157
Query: 501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
              S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L       
Sbjct: 43  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 102
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDH 500
                + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D 
Sbjct: 103 EQILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 157
Query: 501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
              S   + VGT  Y++PE  +    S  +D+++ G+ L+E+A GR PI
Sbjct: 158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 34/221 (15%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI----ESLGR-----LRHKHLVNLQGWC 412
           + F+  +VIG G FGEV    +    R +A +I    E L R      R +  V + G C
Sbjct: 90  EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 413 K----------RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA--GLLY 460
           +           +  L LV DY   G L +LL   E+ +     RF I + + A   +  
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG-LARLFDHGKISHTTNVVGTIGYIAPE 519
           LH       +HRD+K  NVL+D + + RL DFG   ++ D G +  ++  VGT  YI+PE
Sbjct: 210 LH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-QSSVAVGTPDYISPE 262
Query: 520 LART-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           + +      GK     D ++ GV + E+  G  P  ++  +
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 303

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 36/233 (15%)
Query: 353 RYSDLYTATKGFKQS-------EVIGTGGFGEV----YKGVLPTRMREFAAEIESLGR-- 399
           RY  +    +G +         +VIG G FGEV    +K        +  ++ E + R  
Sbjct: 59  RYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSD 118
Query: 400 ----LRHKHLVN-------LQGWCKRKRD--LLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
                  + ++        +Q +C  + D  L +V +Y+P G L +L+  N +    W +
Sbjct: 119 SAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM-SNYDVPEKWAK 177
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
            +      A  +L L       +IHRDVK  N+L+D   + +L DFG     D   + H 
Sbjct: 178 FYT-----AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC 232
Query: 507 TNVVGTIGYIAPELART----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
              VGT  YI+PE+ ++    G      D ++ GV L E+  G  P  +D  +
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV 285

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H  LV L    + +  L  V +Y+  G L  +        L  E        I+  L YL
Sbjct: 69  HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPEL 520
           HE   + +I+RD+K  NVL+D++ + +L D+G+ +  +  +   TT+   GT  YIAPE+
Sbjct: 127 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEI 181
Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPID 550
            R      S D +A GVL+ E+  GR P D
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 25/199 (12%)
Query: 369 VIGTGGFGEV------------------YKGVLPTRMREFAAEIESLGRLRHKHLVNLQG 410
            IGTG +G                    Y  +     +   +E+  L  L+H ++V    
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 411 WC--KRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
               +    L +V +Y   G L S++     E   L  E    ++  +   L   H   +
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 467 --QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               V+HRD+K  NV +D   N +LGDFGLAR+ +H   S     VGT  Y++PE     
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQMNRM 191
Query: 525 KASCSTDVFAYGVLLLEIA 543
             +  +D+++ G LL E+ 
Sbjct: 192 SYNEKSDIWSLGCLLYELC 210

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 34/221 (15%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI----ESLGR-----LRHKHLVNLQGWC 412
           + F+  +VIG G FGEV    +    R +A +I    E L R      R +  V + G C
Sbjct: 74  EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 413 K----------RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA--GLLY 460
           +           +  L LV DY   G L +LL   E+ +     RF I + + A   +  
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG-LARLFDHGKISHTTNVVGTIGYIAPE 519
           LH       +HRD+K  NVL+D + + RL DFG   ++ D G +  ++  VGT  YI+PE
Sbjct: 194 LH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-QSSVAVGTPDYISPE 246
Query: 520 LART-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           + +      GK     D ++ GV + E+  G  P  ++  +
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 287

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 59  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 170
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 226
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 227 VWPGVTS 233

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 58  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 116
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 117 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 169
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 225
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 226 VWPGVTS 232

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 113/249 (45%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 57
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 58  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ 
Sbjct: 118 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLW 169
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 225
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 226 EVVWPGVTS 234

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 58  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 116
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 117 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 169
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 225
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 226 VWPGVTS 232

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 59  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 170
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 226
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 227 VWPGVTS 233

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 59  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 170
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 226
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 227 VWPGVTS 233

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 58  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 116
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 117 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 169
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 225
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 226 VWPGVTS 232

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 41/217 (18%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---PTRMREFA----------AEIESLGRLRHKHLVNLQG 410
            K  E+IG G +G VYKG L   P  ++ F+            I  +  + H ++     
Sbjct: 15  LKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 411 WCKR-----KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE- 464
             +R     + + LLV +Y PNGSL   L  + +    W     +   +  GL YLH E 
Sbjct: 75  GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 465 -----WEQVVIHRDVKSGNVLIDADMNARLGDFGLA------RLFDHGKISHTT-NVVGT 512
                ++  + HRD+ S NVL+  D    + DFGL+      RL   G+  +   + VGT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 513 IGYIAPE-------LARTGKASCSTDVFAYGVLLLEI 542
           I Y+APE       L     A    D++A G++  EI
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 70  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 129
Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                N    LS +   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 130 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 186
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 187 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 247 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 294
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 295 LVEDLD 300

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 65
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 66  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 124
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 125 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 177
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 233
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 234 VWPGVTS 240

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 59  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 170
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 226
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 227 VWPGVTS 233

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 65
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 66  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 124
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 125 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 177
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 233
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 234 VWPGVTS 240

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 66  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 125
Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                N    LS +   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 126 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 182
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 183 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 243 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 290
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 291 LVEDLD 296

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 48/218 (22%)
Query: 370 IGTGGFGEVYK----GVLPTR------------------MREFAAEIESLGRLRHKHLVN 407
           IG G FG V++    G+LP                      +F  E   +    + ++V 
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV----------------------LSWE 445
           L G C   + + L+++Y+  G L+  L                             LS  
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKIS 504
           ++  I + +AAG+ YL E   +  +HRD+ + N L+  +M  ++ DFGL+R ++      
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
              N    I ++ PE     + +  +DV+AYGV+L EI
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 58  LNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA- 116
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 117 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 169
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 225
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 226 VWPGVTS 232

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 69  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 128
Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                N    LS +   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 129 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 185
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 186 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 246 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 293
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 294 LVEDLD 299

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 52/297 (17%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLP--------TR-----------MRE---FAAEIES 396
            A +    S  +G G FG VY+GV          TR           MRE   F  E   
Sbjct: 9   VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVL---SWEQRF 448
           +      H+V L G   + +  L++ + +  G L S L         N VL   S  +  
Sbjct: 69  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTT 507
            +   IA G+ YL+       +HRD+ + N ++  D   ++GDFG+ R +++        
Sbjct: 129 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
             +  + +++PE  + G  +  +DV+++GV+L EIAT   +P      +  + VL F   
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVME 242
Query: 567 GQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           G +LD  D  P+           ++ +L  +C     + RP+  +++  +  +E+ P
Sbjct: 243 GGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFLEIISSIK-EEMEP 287

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 77  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYS 136
Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                N    LS +   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 254 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 301
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 302 LVEDLD 307

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 77  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 136
Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                N    LS +   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 254 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 301
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 302 LVEDLD 307

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 362 KGFKQSEVIGTGGFGEVY--------KGVLPTRM-----------REFAAEIESLGRLRH 402
           K F     IG G FG VY        + V   +M           ++   E+  L +LRH
Sbjct: 54  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            + +  +G   R+    LV +Y    + D  L +     L   +   +  G   GL YLH
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL-- 520
                 +IHRDVK+GN+L+      +LGDFG A +     ++     VGT  ++APE+  
Sbjct: 172 S---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI-----MAPANXFVGTPYWMAPEVIL 223
Query: 521 -ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
               G+     DV++ G+  +E+A  + P+
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERKPPL 253

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 52/297 (17%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLP--------TR-----------MRE---FAAEIES 396
            A +    S  +G G FG VY+GV          TR           MRE   F  E   
Sbjct: 13  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVL---SWEQRF 448
           +      H+V L G   + +  L++ + +  G L S L         N VL   S  +  
Sbjct: 73  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTT 507
            +   IA G+ YL+       +HRD+ + N ++  D   ++GDFG+ R +++        
Sbjct: 133 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
             +  + +++PE  + G  +  +DV+++GV+L EIAT   +P      +  + VL F   
Sbjct: 190 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVME 246
Query: 567 GQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           G +LD  D  P+           ++ +L  +C     + RP+  +++  +  +E+ P
Sbjct: 247 GGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFLEIISSIK-EEMEP 291

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 52/297 (17%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLP--------TR-----------MRE---FAAEIES 396
            A +    S  +G G FG VY+GV          TR           MRE   F  E   
Sbjct: 15  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVL---SWEQRF 448
           +      H+V L G   + +  L++ + +  G L S L         N VL   S  +  
Sbjct: 75  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTT 507
            +   IA G+ YL+       +HRD+ + N ++  D   ++GDFG+ R +++        
Sbjct: 135 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
             +  + +++PE  + G  +  +DV+++GV+L EIAT   +P      +  + VL F   
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVME 248
Query: 567 GQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           G +LD  D  P+           ++ +L  +C     + RP+  +++  +  +E+ P
Sbjct: 249 GGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFLEIISSIK-EEMEP 293

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 25/199 (12%)
Query: 369 VIGTGGFGEV------------------YKGVLPTRMREFAAEIESLGRLRHKHLVNLQG 410
            IGTG +G                    Y  +     +   +E+  L  L+H ++V    
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 411 WC--KRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
               +    L +V +Y   G L S++     E   L  E    ++  +   L   H   +
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 467 --QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               V+HRD+K  NV +D   N +LGDFGLAR+ +H +       VGT  Y++PE     
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE-DFAKEFVGTPYYMSPEQMNRM 191
Query: 525 KASCSTDVFAYGVLLLEIA 543
             +  +D+++ G LL E+ 
Sbjct: 192 SYNEKSDIWSLGCLLYELC 210

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 52/297 (17%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLP--------TR-----------MRE---FAAEIES 396
            A +    S  +G G FG VY+GV          TR           MRE   F  E   
Sbjct: 15  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVL---SWEQRF 448
           +      H+V L G   + +  L++ + +  G L S L         N VL   S  +  
Sbjct: 75  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTT 507
            +   IA G+ YL+       +HRD+ + N ++  D   ++GDFG+ R +++        
Sbjct: 135 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
             +  + +++PE  + G  +  +DV+++GV+L EIAT   +P      +  + VL F   
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVME 248
Query: 567 GQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           G +LD  D  P+           ++ +L  +C     + RP+  +++  +  +E+ P
Sbjct: 249 GGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFLEIISSIK-EEMEP 293

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------- 434
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 62  LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 121
Query: 435 ---FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
                N    LS +   +    +A G+ YL     +  IHRD+ + NVL+  D   ++ D
Sbjct: 122 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIAD 178
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR   H      TTN    + ++APE       +  +DV+++GVLL EI T G  P 
Sbjct: 179 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                + V+ + +    G  +D        S    E+ ++++    C H     RPT +Q
Sbjct: 239 PG---VPVEELFKLLKEGHRMD------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQ 286
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 287 LVEDLD 292

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 52/297 (17%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLP--------TR-----------MRE---FAAEIES 396
            A +    S  +G G FG VY+GV          TR           MRE   F  E   
Sbjct: 7   VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVL---SWEQRF 448
           +      H+V L G   + +  L++ + +  G L S L         N VL   S  +  
Sbjct: 67  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTT 507
            +   IA G+ YL+       +HRD+ + N ++  D   ++GDFG+ R + +        
Sbjct: 127 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 183
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
             +  + +++PE  + G  +  +DV+++GV+L EIAT   +P      +  + VL F   
Sbjct: 184 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVME 240
Query: 567 GQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           G +LD  D  P+           ++L+L  +C     + RP+  +++  +  +E+ P
Sbjct: 241 GGLLDKPDNCPD-----------MLLELMRMCWQYNPKMRPSFLEIISSIK-EEMEP 285

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 362 KGFKQSEVIGTGGFGEVY--------KGVLPTRM-----------REFAAEIESLGRLRH 402
           K F     IG G FG VY        + V   +M           ++   E+  L +LRH
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            + +  +G   R+    LV +Y    + D  L +     L   +   +  G   GL YLH
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL-- 520
                 +IHRDVK+GN+L+      +LGDFG A +     ++     VGT  ++APE+  
Sbjct: 133 S---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI-----MAPANXFVGTPYWMAPEVIL 184
Query: 521 -ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
               G+     DV++ G+  +E+A  + P+
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPL 214

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 32/200 (16%)
Query: 368 EVIGTGGFGEVYK---------------------GVLPTRMREFAAEIESLGRLRHKHLV 406
           E IG G +G VYK                     G+  T +RE    I  L  L+H ++V
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE----ISILKELKHSNIV 63
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L      K+ L+LV++++ +  L  LL   E  + S   +  +++ +  G+ Y H+   
Sbjct: 64  KLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQ-LLNGIAYCHD--- 118
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTGK 525
           + V+HRD+K  N+LI+ +   ++ DFGLAR F      +T  VV T+ Y AP+ L  + K
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 526 ASCSTDVFAYGVLLLEIATG 545
            S + D+++ G +  E+  G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 52/297 (17%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLP--------TR-----------MRE---FAAEIES 396
            A +    S  +G G FG VY+GV          TR           MRE   F  E   
Sbjct: 9   VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVL---SWEQRF 448
           +      H+V L G   + +  L++ + +  G L S L         N VL   S  +  
Sbjct: 69  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTT 507
            +   IA G+ YL+       +HRD+ + N  +  D   ++GDFG+ R +++        
Sbjct: 129 QMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
             +  + +++PE  + G  +  +DV+++GV+L EIAT   +P      +  + VL F   
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVME 242
Query: 567 GQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           G +LD  D  P+           ++L+L  +C     + RP+  +++  +  +E+ P
Sbjct: 243 GGLLDKPDNCPD-----------MLLELMRMCWQYNPKMRPSFLEIISSIK-EEMEP 287

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 32/200 (16%)
Query: 368 EVIGTGGFGEVYK---------------------GVLPTRMREFAAEIESLGRLRHKHLV 406
           E IG G +G VYK                     G+  T +RE    I  L  L+H ++V
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE----ISILKELKHSNIV 63
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L      K+ L+LV++++ +  L  LL   E  + S   +  +++ +  G+ Y H+   
Sbjct: 64  KLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQ-LLNGIAYCHD--- 118
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTGK 525
           + V+HRD+K  N+LI+ +   ++ DFGLAR F      +T  VV T+ Y AP+ L  + K
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 526 ASCSTDVFAYGVLLLEIATG 545
            S + D+++ G +  E+  G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 131/310 (42%), Gaps = 58/310 (18%)
Query: 352 FRYSDLYT------ATKGFKQSEVIGTGGFGEVYKGVLP--------TR----------- 386
           F  +D+Y       A +    S  +G G FG VY+GV          TR           
Sbjct: 3   FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 62
Query: 387 MRE---FAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NE 438
           MRE   F  E   +      H+V L G   + +  L++ + +  G L S L         
Sbjct: 63  MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 439 NFVL---SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA 495
           N VL   S  +   +   IA G+ YL+       +HRD+ + N ++  D   ++GDFG+ 
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 496 R-LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDH 553
           R + +          +  + +++PE  + G  +  +DV+++GV+L EIAT   +P     
Sbjct: 180 RDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-- 237
Query: 554 FILVDWVLEFQHLGQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
            +  + VL F   G +LD  D  P+           ++ +L  +C     + RP+  +++
Sbjct: 238 -LSNEQVLRFVMEGGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFLEII 285
Query: 612 RYLNGDELLP 621
             +  +E+ P
Sbjct: 286 SSIK-EEMEP 294

>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 115/270 (42%), Gaps = 52/270 (19%)
Query: 23  QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH-----NVIGHAFYNKPIQM 77
           +   F F  FN  + N  LI +E A ++  +G L LT  A      + +G A Y  PI +
Sbjct: 2   ESTSFSFTNFNPNQNN--LILQEDA-LVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHI 58
Query: 78  LDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP---QPSFPGGKAEHYLGI 134
            D +T        +SF+T F F +  P +     GLAF ++P   QP   GG    +LG+
Sbjct: 59  HDNTT-------LASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGG----FLGL 107
Query: 135 LNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKED 194
             +   H  S    A+EFDT   Y+   D    H+GI+ N ++S K  P           
Sbjct: 108 F-ADRAHDASYQTVAVEFDT---YSNAWDPNYTHIGIDTNGIESKKTTP----------- 152
Query: 195 FTLESGDPVQAWIDYDGVNRLVNVTIC-PMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQE 253
           F +  G+     I Y    + +  ++  P+++ +                         E
Sbjct: 153 FDMVYGEKANIVITYQASTKALAASLVFPVSQTS-----------YAVSARVDLRDILPE 201
Query: 254 TMYVGFSASTGRK---VSSHFILGWSFSMN 280
            + VGFSA+TG     V +H I+ WSF+++
Sbjct: 202 YVRVGFSATTGLNAGVVETHDIVSWSFAVS 231

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 62
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 63  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 121
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 122 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 174
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 230
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 231 VWPGVTS 237

>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 115/265 (43%), Gaps = 39/265 (14%)
Query: 24  KEEFIFNGFNETKTNQGLITRERASILKPSGALRLT--DNAHN---VIGHAFYNKPIQML 78
            +E  F   N       L+ +  AS+   +G L+LT  +N       +G A Y  P+++ 
Sbjct: 1   SDELSFTINNFVPNEADLLFQGEASV-SSTGVLQLTKVENGQPQKYSVGRALYAAPVRIW 59
Query: 79  DKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNS 137
             +T      + +SFST F F +  PN      GLAF ++P  S  P G    YLG+ N+
Sbjct: 60  GNTTG-----SVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNN 114
Query: 138 TNDHKPSNHLFAIEFDTVNGYN-ETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFT 196
           +N    SN + A+EFDT   ++ +  D    H+GI+VN ++SIK     +   G      
Sbjct: 115 SNSDS-SNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVA---- 169
Query: 197 LESGDPVQAWIDYDGVNR-LVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETM 255
                   A I Y   N+ L+   + P N+                           E +
Sbjct: 170 -------FATITYLAPNKTLIASLVYPSNQTT-----------FSVAASVDLKEILPEWV 211
Query: 256 YVGFSASTG--RKVSSHFILGWSFS 278
            VGFSA+TG   +V +H +L WSF+
Sbjct: 212 RVGFSAATGYPTEVETHDVLSWSFT 236

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 89/211 (42%), Gaps = 48/211 (22%)
Query: 370 IGTGGFGEVYKGV------------------LPTRMREFAAEIESLGRLRHKHLVNL-QG 410
           IG G F  VYKG+                    +  + F  E E L  L+H ++V     
Sbjct: 34  IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 411 W---CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK---------GIAAGL 458
           W    K K+ ++LV +   +G+L + L           +RF + K          I  GL
Sbjct: 94  WESTVKGKKCIVLVTELXTSGTLKTYL-----------KRFKVXKIKVLRSWCRQILKGL 142
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            +LH      +IHRD+K  N+ I     + ++GD GLA L    + S    V+GT  + A
Sbjct: 143 QFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXA 198
Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           PE     K   S DV+A+G   LE AT   P
Sbjct: 199 PEXYEE-KYDESVDVYAFGXCXLEXATSEYP 228

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 29/202 (14%)
Query: 370 IGTGGFGEVY-------------KGVLPTRMR------EFAAEIESLGRLRHKHLVNLQG 410
           +G G FG VY             K +  T++       +   E+E    LRH +++ L G
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGLLYLHEEWEQVV 469
           +      + L+ +Y P G++   L     F    EQR    I  +A  L Y H    + V
Sbjct: 80  YFHDATRVYLILEYAPLGTVYRELQKLSRFD---EQRTATYITELANALSYCHS---KRV 133
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+K  N+L+ ++   ++ DFG +    H   S    + GT+ Y+ PE+         
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 530 TDVFAYGVLLLEIATGRRPIDS 551
            D+++ GVL  E   G  P ++
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEA 212

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 362 KGFKQSEVIGTGGFGEVYKG--------VLPTRMR----------EFAAEIESLGRLRHK 403
           + +++ E IG G +G V+K         V   R+R              EI  L  L+HK
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++V L       + L LV+++  +  L    FD+ N  L  E   + +  +  GL + H 
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
              + V+HRD+K  N+LI+ +   +L DFGLAR F      ++  VV T+ Y  P++   
Sbjct: 120 ---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFG 175
Query: 524 GKA-SCSTDVFAYGVLLLEIATGRRPI 549
            K  S S D+++ G +  E+A   RP+
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPL 202

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 52/297 (17%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLP--------TR-----------MRE---FAAEIES 396
            A +    S  +G G FG VY+GV          TR           MRE   F  E   
Sbjct: 12  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 397 LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVL---SWEQRF 448
           +      H+V L G   + +  L++ + +  G L S L         N VL   S  +  
Sbjct: 72  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTT 507
            +   IA G+ YL+       +HRD+ + N ++  D   ++GDFG+ R +++        
Sbjct: 132 QMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 188
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL 566
             +  + +++PE  + G  +  +DV+++GV+L EIAT   +P      +  + VL F   
Sbjct: 189 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG---LSNEQVLRFVME 245
Query: 567 GQVLDVVD--PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           G +LD  D  P+           ++ +L  +C     + RP+  +++  +  +E+ P
Sbjct: 246 GGLLDKPDNCPD-----------MLFELMRMCWQYNPKMRPSFLEIISSIK-EEMEP 290

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 21  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 81  PHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 138
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 139 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 32/200 (16%)
Query: 368 EVIGTGGFGEVYK---------------------GVLPTRMREFAAEIESLGRLRHKHLV 406
           E IG G +G VYK                     G+  T +RE    I  L  L+H ++V
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE----ISILKELKHSNIV 63
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L      K+ L+LV++++ +  L  LL   E  + S   +  +++ +  G+ Y H+   
Sbjct: 64  KLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQ-LLNGIAYCHD--- 118
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTGK 525
           + V+HRD+K  N+LI+ +   ++ DFGLAR F      +T  +V T+ Y AP+ L  + K
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKK 177
Query: 526 ASCSTDVFAYGVLLLEIATG 545
            S + D+++ G +  E+  G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 18  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 78  PHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 135
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 136 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 58
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G++ 
Sbjct: 59  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLS- 117
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV T+ Y 
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 170
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 226
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 227 VWPGVTS 233

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 80  PHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 137
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 138 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 79  PHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 136
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 77  PHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 134
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 362 KGFKQSEVIGTGGFGEVY----------------KGVLPTRMREFAAEIESLGRLRHKHL 405
           K F   EV+G+G F EV+                K     R      EI  L +++H+++
Sbjct: 9   KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           V L+   +      LV   +  G L D +L   E  V + +    +I+ + + + YLHE 
Sbjct: 69  VTLEDIYESTTHYYLVMQLVSGGELFDRIL---ERGVYTEKDASLVIQQVLSAVKYLHE- 124
Query: 465 WEQVVIHRDVKSGNVL-IDADMNARL--GDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
               ++HRD+K  N+L +  + N+++   DFGL+++  +G +S      GT GY+APE+ 
Sbjct: 125 --NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS---TACGTPGYVAPEVL 179
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
                S + D ++ GV+   +  G  P
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPP 206

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 27  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 87  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 144
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 145 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIP---NGSLDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 120 A----FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 227
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 228 EVVWPGVTS 236

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 34/261 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L       + + 
Sbjct: 84  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 200
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 261 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 308
Query: 610 VLRYLNGDELLPIIDNWSSLD 630
           ++  L  D +L +  N   LD
Sbjct: 309 LVEDL--DRILTLTTNEEYLD 327

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 23  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 83  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 140
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 141 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 34/209 (16%)
Query: 364 FKQSE-----VIGTGGFGEVYKGV---------LPTRMR---------EFAAEIE---SL 397
           FK++E     V+G+G FG V+KGV         +P  ++          F A  +   ++
Sbjct: 28  FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 87
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAG 457
           G L H H+V L G C     L LV  Y+P GSL   +  +    L  +   N    IA G
Sbjct: 88  GSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKG 145
Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIGY 515
           + YL E     ++HR++ + NVL+ +    ++ DFG+A L   D  ++ + +     I +
Sbjct: 146 MYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY-SEAKTPIKW 201
Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIAT 544
           +A E    GK +  +DV++YGV + E+ T
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMT 230

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIP---NGSLDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 120 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 227
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 228 EVVWPGVTS 236

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 42  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 102 PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 159
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 160 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 18  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 78  PHVCRLLGIC-LTSTVQLIMQLMPFGXLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 135
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 136 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQG--WCKRKRDLLLVYDYIPNGSLDSLL------F 435
           P + R+F  EI+ L  L    +V  +G  +   ++ L LV +Y+P+G L   L       
Sbjct: 52  PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL 111
Query: 436 DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA 495
           D    +L   Q       I  G+ YL     +  +HRD+ + N+L++++ + ++ DFGLA
Sbjct: 112 DASRLLLYSSQ-------ICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLA 161
Query: 496 RLFDHGKISHTTNVVG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           +L    K  +     G   I + APE       S  +DV+++GV+L E+ T
Sbjct: 162 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           I+ GL +LH+   + +I+RD+K  NV++D++ + ++ DFG+ +      ++ T    GT 
Sbjct: 129 ISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT-TREFCGTP 184
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
            YIAPE+        S D +AYGVLL E+  G+ P D +
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 223

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 79  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 136
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 71  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 128
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 129 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 30/210 (14%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGR---------------------- 399
           + F+  +++G G FG+V+        + FA  I++L +                      
Sbjct: 18  EDFELHKMLGKGSFGKVFLAEFKKTNQFFA--IKALKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
             H  L ++    + K +L  V +Y+  G L   +     F LS    +     I  GL 
Sbjct: 76  WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQ 133
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           +LH    + +++RD+K  N+L+D D + ++ DFG+ +    G  + T    GT  YIAPE
Sbjct: 134 FLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-AKTNEFCGTPDYIAPE 189
Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPI 549
           +    K + S D +++GVLL E+  G+ P 
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQG--WCKRKRDLLLVYDYIPNGSLDSLL------F 435
           P + R+F  EI+ L  L    +V  +G  +   ++ L LV +Y+P+G L   L       
Sbjct: 65  PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL 124
Query: 436 DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA 495
           D    +L   Q       I  G+ YL     +  +HRD+ + N+L++++ + ++ DFGLA
Sbjct: 125 DASRLLLYSSQ-------ICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLA 174
Query: 496 RLFDHGKISHTTNVVG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           +L    K  +     G   I + APE       S  +DV+++GV+L E+ T
Sbjct: 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 80  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 137
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 138 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 58
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIP---NGSLDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 59  KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 119 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 170
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 226
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 227 EVVWPGVTS 235

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 80  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 137
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 138 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 57
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIP---NGSLDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 58  KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 118 A----FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 169
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 225
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 226 EVVWPGVTS 234

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQG--WCKRKRDLLLVYDYIPNGSLDSLL------F 435
           P + R+F  EI+ L  L    +V  +G  +   ++ L LV +Y+P+G L   L       
Sbjct: 53  PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL 112
Query: 436 DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA 495
           D    +L   Q       I  G+ YL     +  +HRD+ + N+L++++ + ++ DFGLA
Sbjct: 113 DASRLLLYSSQ-------ICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLA 162
Query: 496 RLFDHGKISHTTNVVG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           +L    K  +     G   I + APE       S  +DV+++GV+L E+ T
Sbjct: 163 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 117 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 224
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 225 EVVWPGVTS 233

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 117 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 224
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 225 EVVWPGVTS 233

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 77  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 134
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 65/293 (22%)
Query: 364 FKQSEVIGTGGFGEVYKG--------VLPTRMR----EFAAEIESLGRLRHKHLVNLQG- 410
           FK+ E+IG+GGFG+V+K          +  R++    +   E+++L +L H ++V+  G 
Sbjct: 14  FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 411 W------CKRKRDLLLVYDYIPNGSLDS-----------LLFDNENFVLSW-EQR----- 447
           W       +   D L   DY P  S +S           + F ++  +  W E+R     
Sbjct: 74  WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 448 -----FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL-ARLFDHG 501
                  + + I  G+ Y+H    + +IHRD+K  N+ +      ++GDFGL   L + G
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVL 561
           K    T   GT+ Y++PE   +       D++A G++L E+             + D   
Sbjct: 191 K---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL-----------LHVCDTAF 236
Query: 562 EFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           E        D+ D  +   +   E  L+ +L      +K E RP   ++LR L
Sbjct: 237 ETSKF--FTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILRTL 283

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 29/208 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------KGVLPTRMR------EFAAEIESLGRLRHKH 404
           F+    +G G FG VY             K +  +++       +   EIE    L H +
Sbjct: 25  FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR-FNIIKGIAAGLLYLHE 463
           ++ L  +   +R + L+ +Y P G L   L  +  F    EQR   I++ +A  L+Y H 
Sbjct: 85  ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFD---EQRTATIMEELADALMYCHG 141
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
              + VIHRD+K  N+L+      ++ DFG +    H        + GT+ Y+ PE+   
Sbjct: 142 ---KKVIHRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDS 551
              +   D++  GVL  E+  G  P +S
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFES 223

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 34/209 (16%)
Query: 364 FKQSE-----VIGTGGFGEVYKGV---------LPTRMR---------EFAAEIE---SL 397
           FK++E     V+G+G FG V+KGV         +P  ++          F A  +   ++
Sbjct: 10  FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAG 457
           G L H H+V L G C     L LV  Y+P GSL   +  +    L  +   N    IA G
Sbjct: 70  GSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKG 127
Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIGY 515
           + YL E     ++HR++ + NVL+ +    ++ DFG+A L   D  ++ + +     I +
Sbjct: 128 MYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY-SEAKTPIKW 183
Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIAT 544
           +A E    GK +  +DV++YGV + E+ T
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMT 212

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 20  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 80  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 137
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 138 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 24  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 84  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 141
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 142 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 362 KGFKQSEVIGTGGFGEVY-----------------KGVLPTRMREFAAEIESLGRLRHKH 404
           K F+  E +GTG F EV                  K  L  +      EI  L +++H++
Sbjct: 22  KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLH 462
           +V L+   +    L LV   +  G L    FD   E    + +    +I+ +   + YLH
Sbjct: 82  IVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
Query: 463 EEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
                 ++HRD+K  N+L    D +    + DFGL+++   G +  T    GT GY+APE
Sbjct: 138 R---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA--CGTPGYVAPE 192
Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVLEFQH 565
           +      S + D ++ GV+   +  G  P  D +   L + +L+ ++
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEY 239

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 117 A----FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 224
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 225 EVVWPGVTS 233

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 51  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 111 PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 168
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 169 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 226 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 117 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 224
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 225 EVVWPGVTS 233

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 56
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 117 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 168
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 224
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 225 EVVWPGVTS 233

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 77  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 134
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 14  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 74  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAEGMNYLE 131
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 132 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 57
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 58  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 118 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 169
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 225
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 226 EVVWPGVTS 234

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 77  PHVCRLLGIC-LTSTVQLITQLMPFGXLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 134
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 32/207 (15%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNI 450
           EI  L RL H +++ L+   +   ++ LV + +  G L    FD   E    S     + 
Sbjct: 98  EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAADA 153
Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTT 507
           +K I   + YLHE     ++HRD+K  N+L      D   ++ DFGL+++ +H  +  T 
Sbjct: 154 VKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT- 209
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATG--------------RRPIDSDH 553
            V GT GY APE+ R        D+++ G++   +  G              RR ++ ++
Sbjct: 210 -VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY 268
Query: 554 FILVDW----VLEFQHLGQVLDVVDPN 576
           + +  W     L  + L + L V+DP 
Sbjct: 269 YFISPWWDEVSLNAKDLVRKLIVLDPK 295

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 120 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 227
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 228 EVVWPGVTS 236

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 58
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 59  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 119 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 170
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 226
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 227 EVVWPGVTS 235

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 120 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 227
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 228 EVVWPGVTS 236

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 58
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 59  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 119 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 170
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 226
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 227 EVVWPGVTS 235

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 120 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 227
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 228 EVVWPGVTS 236

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 24/202 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPID 550
             DV++ G++L  +  G  P D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 58
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 59  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 119 A----FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 170
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 226
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 227 EVVWPGVTS 235

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 58  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 116
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ Y 
Sbjct: 117 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 169
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 225
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 226 VWPGVTS 232

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 24/202 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 530 -TDVFAYGVLLLEIATGRRPID 550
             DV++ G++L  +  G  P D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 59
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 60  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 120 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 227
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 228 EVVWPGVTS 236

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 57
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 58  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 116
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ Y 
Sbjct: 117 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 169
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 225
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 226 VWPGVTS 232

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 5   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 60
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 61  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 121 A----FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 172
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 228
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 229 EVVWPGVTS 237

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 34/261 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE------- 438
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L           
Sbjct: 84  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXS 143
Query: 439 ---NFV----LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N V    ++++   +    +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 200
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 261 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 308
Query: 610 VLRYLNGDELLPIIDNWSSLD 630
           ++  L  D +L +  N   LD
Sbjct: 309 LVEDL--DRILTLTTNEEYLD 327

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 360 ATKGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESL 397
           + + F++ E IG G +G VYK                      GV  T +RE    I  L
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLL 57
Query: 398 GRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGI 454
             L H ++V L      +  L LV++++       +D+         L     F +++G+
Sbjct: 58  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           A    + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ 
Sbjct: 118 A----FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 169
Query: 515 YIAPELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVL 570
           Y APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPD 225
Query: 571 DVVDPNLGS 579
           +VV P + S
Sbjct: 226 EVVWPGVTS 234

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 45/247 (18%)
Query: 362 KGFKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGR 399
           + F++ E IG G +G VYK                      GV  T +RE    I  L  
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKE 59
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQRFNIIKGIAA 456
           L H ++V L      +  L LV++++       +D+         L     F +++G+A 
Sbjct: 60  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
              + H      V+HRD+K  N+LI+ +   +L DFGLAR F     ++   VV T+ Y 
Sbjct: 119 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 171
Query: 517 APELARTGK-ASCSTDVFAYGVLLLEIATGRR--PIDSDHFILVDWVLE-FQHLGQVLDV 572
           APE+    K  S + D+++ G +  E+ T R   P DS+    +D +   F+ LG   +V
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE----IDQLFRIFRTLGTPDEV 227
Query: 573 VDPNLGS 579
           V P + S
Sbjct: 228 VWPGVTS 234

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGW 411
           F+ ++ + A K  K+  V+      +V   ++  R+   A E        H  L ++   
Sbjct: 38  FKKTNQFFAIKALKKDVVLMDD---DVECTMVEKRVLSLAWE--------HPFLTHMFCT 86
Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH 471
            + K +L  V +Y+  G L   +     F LS    +     I  GL +LH    + +++
Sbjct: 87  FQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLHS---KGIVY 141
Query: 472 RDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTD 531
           RD+K  N+L+D D + ++ DFG+ +    G  + T    GT  YIAPE+    K + S D
Sbjct: 142 RDLKLDNILLDKDGHIKIADFGMCKENMLGD-AKTNXFCGTPDYIAPEILLGQKYNHSVD 200
Query: 532 VFAYGVLLLEIATGRRPI 549
            +++GVLL E+  G+ P 
Sbjct: 201 WWSFGVLLYEMLIGQSPF 218

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 20/171 (11%)
Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQG--WCKRKRDLLLVYDYIPNGSLDSLL------F 435
           P + R+F  EI+ L  L    +V  +G  +   + +L LV +Y+P+G L   L       
Sbjct: 49  PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL 108
Query: 436 DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA 495
           D    +L   Q       I  G+ YL     +  +HRD+ + N+L++++ + ++ DFGLA
Sbjct: 109 DASRLLLYSSQ-------ICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLA 158
Query: 496 RLFDHGKISHTTNVVG--TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
           +L    K        G   I + APE       S  +DV+++GV+L E+ T
Sbjct: 159 KLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L       + + 
Sbjct: 84  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   R+ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMRIAD 200
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 261 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 308
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 309 LVEDLD 314

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 22/171 (12%)
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTT 507
            I   I   L +LH +    VIHRDVK  NVLI+A    ++ DFG++  L D   ++   
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD--VAKDI 168
Query: 508 NVVGTIGYIA-----PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE 562
           +  G   Y+A     PEL + G  S  +D+++ G+ ++E+A  R P DS       W   
Sbjct: 169 D-AGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDS-------WGTP 219
Query: 563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
           FQ L QV++   P L +    AE    +     C  + ++ RPT  +++++
Sbjct: 220 FQQLKQVVEEPSPQLPADKFSAEF---VDFTSQCLKKNSKERPTYPELMQH 267

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 11  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 71  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 125
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 186 PVDVWSCGIVLTAMLAGELPWDQ 208

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 47/280 (16%)
Query: 370 IGTGGFGEVY--------KGVLPTRMR--------------EFAAEIESLGRLRHKHLVN 407
           +G G FG VY        KG   TR+               EF  E   +      H+V 
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNEN----FVLSWEQRFNIIKGIAAGLL 459
           L G   + +  L+V + + +G L S L     + EN       + ++   +   IA G+ 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+    +  +HRD+ + N ++  D   ++GDFG+ R +++          +  + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E  + G  + S+D++++GV+L EI +   +P      +  + VL+F   G  LD  D N 
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKFVMDGGYLDQPD-NC 257
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
                    E V  L  +C     + RPT  +++  L  D
Sbjct: 258 P--------ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 13  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 73  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 30/209 (14%)
Query: 364 FKQSEVIGTGGFGEVY------------KGVLPTRMREFAAEIESLGR-------LRHKH 404
           +K   V+G G FGEV               V+  R  +   + ESL R       L H +
Sbjct: 34  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           ++ L  + + K    LV +    G L   +   + F  S      II+ + +G+ Y+H  
Sbjct: 94  IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGITYMH-- 149
Query: 465 WEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
            +  ++HRD+K  N+L+++   D N R+ DFGL+  F+  K     + +GT  YIAPE+ 
Sbjct: 150 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVL 206
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPID 550
             G      DV++ GV+L  + +G  P +
Sbjct: 207 H-GTYDEKCDVWSTGVILYILLSGCPPFN 234

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 382 VLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
           + P    +   E++ L      ++V   G      ++ +  +++  GSLD +L       
Sbjct: 46  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 105
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDH 500
                + +I   +  GL YL E+ +  ++HRDVK  N+L+++    +L DFG++ +L D 
Sbjct: 106 EQILGKVSI--AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE 161
Query: 501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
                    VGT  Y++PE  +    S  +D+++ G+ L+E+A GR P
Sbjct: 162 ----MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G +GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWE 445
           +++   E+     L H ++V L    + ++ L LV +Y   G + D L+           
Sbjct: 57  LQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR 116
Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH 505
            +F   + I + + Y H+++   ++HRD+K+ N+L+DAD N ++ DFG +  F  G  + 
Sbjct: 117 AKF---RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFG--NK 168
Query: 506 TTNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHF 554
                G   Y APEL +  K      DV++ GV+L  + +G  P D  + 
Sbjct: 169 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218

>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 115/264 (43%), Gaps = 38/264 (14%)
Query: 25  EEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV---IGHAFYNKPIQMLDKS 81
           ++  FN F++   NQ  I  +  + +  +G L++T  +      IG A Y  PIQ+ D  
Sbjct: 4   DDLSFN-FDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSI 62
Query: 82  TSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNSTND 140
           T        +SF+T F F +V  +   G  GLAF ++P  S  P G +    G+ +S++ 
Sbjct: 63  TG-----KVASFATSFSF-VVKADKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDS 116
Query: 141 HKPSNHLFAIEFDTVNG--YNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
              SN + A+EFDT  G  YN   D    H+GI+VNS+KSIK      + NG   D  + 
Sbjct: 117 KS-SNQIIAVEFDTYFGKAYNPW-DPDFKHIGIDVNSIKSIKTVKWD-WRNGEVADVVIT 173
Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVG 258
              P ++            +T+C       LS+                     E + VG
Sbjct: 174 YRAPTKS------------LTVC-------LSYP-SDGTSNIITASVDLKAILPEWVSVG 213
Query: 259 FSASTGR--KVSSHFILGWSFSMN 280
           FS   G   +  +H +L W F+ N
Sbjct: 214 FSGGVGNAAEFETHDVLSWYFTSN 237

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 364 FKQSEVIGTGGFGEVY------------KGVLPTRMREFAAEIESLGR-------LRHKH 404
           +K   V+G G FGEV               V+  R  +   + ESL R       L H +
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           ++ L  + + K    LV +    G L   +   + F  S      II+ + +G+ Y+H  
Sbjct: 88  IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGITYMH-- 143
Query: 465 WEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
            +  ++HRD+K  N+L+++   D N R+ DFGL+  F+  K     + +GT  YIAPE+ 
Sbjct: 144 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVL 200
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
             G      DV++ GV+L  + +G  P
Sbjct: 201 H-GTYDEKCDVWSTGVILYILLSGCPP 226

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L ++ +++  G+L  ++       L+ EQ   + + +   L YLH    Q VIHRD+KS
Sbjct: 116 ELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKS 169
Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
            ++L+  D   +L DFG         +     +VGT  ++APE+      +   D+++ G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISK-DVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLG 228
Query: 537 VLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA 584
           ++++E+  G  P  SD  +        Q + ++ D   P L +S+ V+
Sbjct: 229 IMVIEMVDGEPPYFSDSPV--------QAMKRLRDSPPPKLKNSHKVS 268

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 47/280 (16%)
Query: 370 IGTGGFGEVY--------KGVLPTRMR--------------EFAAEIESLGRLRHKHLVN 407
           +G G FG VY        KG   TR+               EF  E   +      H+V 
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNEN----FVLSWEQRFNIIKGIAAGLL 459
           L G   + +  L+V + + +G L S L     + EN       + ++   +   IA G+ 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+    +  +HRD+ + N ++  D   ++GDFG+ R +++          +  + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E  + G  + S+D++++GV+L EI +   +P      +  + VL+F   G  LD  D N 
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKFVMDGGYLDQPD-NC 257
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
                    E V  L  +C     + RPT  +++  L  D
Sbjct: 258 P--------ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 46/222 (20%)
Query: 359 TATKG-----FKQSEVIGTGGFGEVY------------------KGVLPTRMREFAAEIE 395
           T+ KG     +++ + +G+G +GEV                     V  +   +   E+ 
Sbjct: 29  TSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVA 88
Query: 396 SLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------ 449
            L  L H +++ L  + + KR+  LV +    G L    FD     +    +FN      
Sbjct: 89  VLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL----FDE----IIHRMKFNEVDAAV 140
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHT 506
           IIK + +G+ YLH+     ++HRD+K  N+L+++   D   ++ DFGL+ +F++ K    
Sbjct: 141 IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK--KM 195
Query: 507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
              +GT  YIAPE+ R  K     DV++ GV+L  +  G  P
Sbjct: 196 KERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP 236

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L       + + 
Sbjct: 84  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 200
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++     +TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 201 FGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 261 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 308
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 309 LVEDLD 314

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 45/222 (20%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGRLR--------- 401
           + ++  E++G G    V + +     +E+A +I           E +  LR         
Sbjct: 17  ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 402 ------HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
                 H +++ L+   +      LV+D +  G L   L   E   LS ++   I++ + 
Sbjct: 77  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALL 134
Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
             +  LH+     ++HRD+K  N+L+D DMN +L DFG +   D G+     +V GT  Y
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLRSVCGTPSY 189
Query: 516 IAPELART---------GKASCSTDVFAYGVLLLEIATGRRP 548
           +APE+            GK     D+++ GV++  +  G  P
Sbjct: 190 LAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPP 228

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 43/243 (17%)
Query: 360 ATKGFKQSEVIGTGGFGEVYKG------------------------VLPTRMREFAAEIE 395
           AT  ++    IG G +G VYK                          LP       A + 
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 396 SLGRLRHKHLVNLQGWCKRKR-----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
            L    H ++V L   C   R      + LV++++ +  L + L       L  E   ++
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 451 IKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVV 510
           ++    GL +LH      ++HRD+K  N+L+ +    +L DFGLAR++ +      T VV
Sbjct: 126 MRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPVV 180
Query: 511 GTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVL 570
            T+ Y APE+      +   D+++ G +  E+   R+P+   +        E   LG++ 
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS-------EADQLGKIF 232
Query: 571 DVV 573
           D++
Sbjct: 233 DLI 235

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 45/222 (20%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGRLR--------- 401
           + ++  E++G G    V + +     +E+A +I           E +  LR         
Sbjct: 4   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 402 ------HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
                 H +++ L+   +      LV+D +  G L   L   E   LS ++   I++ + 
Sbjct: 64  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALL 121
Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
             +  LH+     ++HRD+K  N+L+D DMN +L DFG +   D G+      V GT  Y
Sbjct: 122 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSY 176
Query: 516 IAPELART---------GKASCSTDVFAYGVLLLEIATGRRP 548
           +APE+            GK     D+++ GV++  +  G  P
Sbjct: 177 LAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPP 215

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 21  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 81  PHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 138
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFG A+L     K  H       I ++A E  
Sbjct: 139 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 362 KGFKQSEVIGTGGFGEVYKG--------VLPTRMR----------EFAAEIESLGRLRHK 403
           + +++ E IG G +G V+K         V   R+R              EI  L  L+HK
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++V L       + L LV+++  +  L    FD+ N  L  E   + +  +  GL + H 
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
              + V+HRD+K  N+LI+ +   +L +FGLAR F      ++  VV T+ Y  P++   
Sbjct: 120 ---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFG 175
Query: 524 GKA-SCSTDVFAYGVLLLEIATGRRPI 549
            K  S S D+++ G +  E+A   RP+
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPL 202

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 79  PHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 136
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFG A+L     K  H       I ++A E  
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 30/209 (14%)
Query: 364 FKQSEVIGTGGFGEVY------------KGVLPTRMREFAAEIESLGR-------LRHKH 404
           +K   V+G G FGEV               V+  R  +   + ESL R       L H +
Sbjct: 51  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           ++ L  + + K    LV +    G L   +   + F  S      II+ + +G+ Y+H  
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGITYMH-- 166
Query: 465 WEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
            +  ++HRD+K  N+L+++   D N R+ DFGL+  F+  K     + +GT  YIAPE+ 
Sbjct: 167 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVL 223
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPID 550
             G      DV++ GV+L  + +G  P +
Sbjct: 224 H-GTYDEKCDVWSTGVILYILLSGCPPFN 251

>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 44/263 (16%)
Query: 27  FIFNGFNETKTN---QGLITRERASILKPSGALRLTDN----AHNVIGHAFYNKPIQMLD 79
           F F  F+  + N   QG     R +IL+    L  TD+      + +G   ++  +++ +
Sbjct: 14  FSFINFDRDERNLIFQGDAHTSRNNILQ----LTRTDSNGAPVRSTVGRILHSAQVRLWE 69
Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP-QPSFPGGKAEHYLGILNS- 137
           KST+       ++  T F F + +P S     G+AF ++P   + P G A   LG+ N  
Sbjct: 70  KSTN-----RVANLQTQFSFFLSSPLSNPAD-GIAFFIAPPDTTIPSGSAGGLLGLFNPR 123
Query: 138 TNDHKPSNHLFAIEFDTVNGYNE-TSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFT 196
           T  ++ +N + A+EFDT    N  T D    H+GI+VNS++S K+      E        
Sbjct: 124 TALNESANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVVRWERRE-------- 175
Query: 197 LESGDPVQAWIDYDGVNRLVNVTIC-PMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETM 255
              G  +   + Y+   R ++V    P  ++ +LS                      E +
Sbjct: 176 ---GKTLNVLVTYNPSTRTIDVVATYPDGQRYQLS------------HVVDLTTILPEWV 220
Query: 256 YVGFSASTGRKVSSHFILGWSFS 278
            VGFSA++G +  +H +  WSF+
Sbjct: 221 RVGFSAASGEQFQTHNLESWSFT 243

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 45/222 (20%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGRLR--------- 401
           + ++  E++G G    V + +     +E+A +I           E +  LR         
Sbjct: 17  ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 402 ------HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
                 H +++ L+   +      LV+D +  G L   L   E   LS ++   I++ + 
Sbjct: 77  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALL 134
Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
             +  LH+     ++HRD+K  N+L+D DMN +L DFG +   D G+      V GT  Y
Sbjct: 135 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSY 189
Query: 516 IAPELART---------GKASCSTDVFAYGVLLLEIATGRRP 548
           +APE+            GK     D+++ GV++  +  G  P
Sbjct: 190 LAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPP 228

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L       + + 
Sbjct: 73  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 132
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 133 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 189
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 190 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 250 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 297
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 298 LVEDLD 303

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L       + + 
Sbjct: 71  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 130
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 131 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLTARNVLVTENNVMKIAD 187
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 188 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 248 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 295
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 296 LVEDLD 301

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 30/209 (14%)
Query: 364 FKQSEVIGTGGFGEVY------------KGVLPTRMREFAAEIESLGR-------LRHKH 404
           +K   V+G G FGEV               V+  R  +   + ESL R       L H +
Sbjct: 52  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           ++ L  + + K    LV +    G L   +   + F  S      II+ + +G+ Y+H  
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGITYMH-- 167
Query: 465 WEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
            +  ++HRD+K  N+L+++   D N R+ DFGL+  F+  K     + +GT  YIAPE+ 
Sbjct: 168 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVL 224
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPID 550
             G      DV++ GV+L  + +G  P +
Sbjct: 225 H-GTYDEKCDVWSTGVILYILLSGCPPFN 252

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
            ++ +V+G+G FG VYKG+                      P   +E   E   +  +  
Sbjct: 19  LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++  L G C     + LV   +P G L   + +N   + S +   N    IA G+ YL 
Sbjct: 79  PYVSRLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCMQIAKGMSYLE 136
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELA 521
           +     ++HRD+ + NVL+ +  + ++ DFGLARL D  +   H       I ++A E  
Sbjct: 137 D---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
              + +  +DV++YGV + E+ T G +P D
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223

>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus Vulgaris Length = 240

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 104/255 (40%), Gaps = 56/255 (21%)
Query: 37  TNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLDKSTSLSSKPNA 90
           T+  LI +  A+I    G L+LT    N       +G AFY+ PIQ+ D +       N 
Sbjct: 13  TDDKLILQGNATI-SSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSN-------NV 64
Query: 91  SSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAI 150
           +SF+T F F I   N     +GLAF + P  S P  K + +LGI N TN+ +P+    A+
Sbjct: 65  ASFNTNFTFIIRAKNQSISAYGLAFALVPVNS-PPQKKQEFLGIFN-TNNPEPNARTVAV 122
Query: 151 EFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYD 210
            F+T            N +  + N +K    E           DF   +G+     I YD
Sbjct: 123 VFNTF----------KNRIDFDKNFIKPYVNENC---------DFHKYNGEKTDVQITYD 163
Query: 211 GVNRLVNV----TICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSASTG-- 264
             N  + V    T+  +      + H  K                 E + VGFS ++G  
Sbjct: 164 SSNNDLRVFLHFTVSQVKCSVSATVHLEKEV--------------DEWVSVGFSPTSGLT 209
Query: 265 -RKVSSHFILGWSFS 278
                +H +L WSFS
Sbjct: 210 EDTTETHDVLSWSFS 224

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L       + + 
Sbjct: 84  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 200
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 261 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 308
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 309 LVEDLD 314

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L       + + 
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 189
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 190 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 246
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 247 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 307 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 354
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 355 LVEDLD 360

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 79  PHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 136
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFG A+L     K  H       I ++A E  
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++ +Y   G+L   L       + + 
Sbjct: 76  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 135
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 136 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 192
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 193 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 253 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 300
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 301 LVEDLD 306

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+ +G FG VYKG+                      P   +E   E   +  + +
Sbjct: 17  FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 77  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 134
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+ +G FG VYKG+                      P   +E   E   +  + +
Sbjct: 24  FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 84  PHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 141
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 142 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 47/280 (16%)
Query: 370 IGTGGFGEVY--------KGVLPTRMR--------------EFAAEIESLGRLRHKHLVN 407
           +G G FG VY        KG   TR+               EF  E   +      H+V 
Sbjct: 24  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNEN----FVLSWEQRFNIIKGIAAGLL 459
           L G   + +  L+V + + +G L S L     + EN       + ++   +   IA G+ 
Sbjct: 84  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+    +  +HRD+ + N ++  D   ++GDFG+ R +++          +  + ++AP
Sbjct: 144 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E  + G  + S+D++++GV+L EI +   +P      +  + VL+F   G  LD  D N 
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKFVMDGGYLDQPD-NC 256
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
                    E V  L  +C     + RPT  +++  L  D
Sbjct: 257 P--------ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 59/255 (23%)
Query: 335 IAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----------- 383
           +  F+ILED + + P            K     + +G G FG+V K              
Sbjct: 7   VDAFKILEDPKWEFPR-----------KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT 55
Query: 384 -----------PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDS 432
                      P+ +R+  +E   L ++ H H++ L G C +   LLL+ +Y   GSL  
Sbjct: 56  VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 433 LLFDNENF----------------------VLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            L ++                          L+     +    I+ G+ YL E     ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MSLV 172
Query: 471 HRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           HRD+ + N+L+      ++ DFGL+R +++       +     + ++A E       +  
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 530 TDVFAYGVLLLEIAT 544
           +DV+++GVLL EI T
Sbjct: 233 SDVWSFGVLLWEIVT 247

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 59/255 (23%)
Query: 335 IAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----------- 383
           +  F+ILED + + P            K     + +G G FG+V K              
Sbjct: 7   VDAFKILEDPKWEFPR-----------KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT 55
Query: 384 -----------PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDS 432
                      P+ +R+  +E   L ++ H H++ L G C +   LLL+ +Y   GSL  
Sbjct: 56  VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 433 LLFDNENF----------------------VLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            L ++                          L+     +    I+ G+ YL E     ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLV 172
Query: 471 HRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           HRD+ + N+L+      ++ DFGL+R +++       +     + ++A E       +  
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 530 TDVFAYGVLLLEIAT 544
           +DV+++GVLL EI T
Sbjct: 233 SDVWSFGVLLWEIVT 247

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 17  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 77  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 134
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFG A+L     K  H       I ++A E  
Sbjct: 135 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 119/282 (42%), Gaps = 47/282 (16%)
Query: 368 EVIGTGGFGEVYKGVL---------------PTRMREFAAEIESLGRLRHKHLVNLQGWC 412
           E+IG G FG+VY G                   +++ F  E+ +  + RH+++V   G C
Sbjct: 39  ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHR 472
                L ++       +L S++ D +  VL   +   I + I  G+ YLH    + ++H+
Sbjct: 99  MSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLH---AKGILHK 154
Query: 473 DVKSGNVLIDADMNARLGDFGL---ARLFDHGKISHTTNVV-GTIGYIAPELARTGKA-- 526
           D+KS NV  D +    + DFGL   + +   G+      +  G + ++APE+ R      
Sbjct: 155 DLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT 213
Query: 527 -------SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
                  S  +DVFA G +  E+     P  +     + W        Q+   + PNL  
Sbjct: 214 EEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW--------QMGTGMKPNLSQ 265
Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
             +  E+  +L   L C   + E RPT  +++  L   E LP
Sbjct: 266 IGMGKEISDIL---LFCWAFEQEERPTFTKLMDML---EKLP 301

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   EI  L  L H +++ L    + K+   LV ++   G L   + +   F        
Sbjct: 92  EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC--DAA 149
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---MNARLGDFGLARLFDHGKISH 505
           NI+K I +G+ YLH+     ++HRD+K  N+L++     +N ++ DFGL+  F   K   
Sbjct: 150 NIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF--SKDYK 204
Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
             + +GT  YIAPE+ +  K +   DV++ GV++  +  G  P
Sbjct: 205 LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 59/255 (23%)
Query: 335 IAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----------- 383
           +  F+ILED + + P            K     + +G G FG+V K              
Sbjct: 7   VDAFKILEDPKWEFPR-----------KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT 55
Query: 384 -----------PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDS 432
                      P+ +R+  +E   L ++ H H++ L G C +   LLL+ +Y   GSL  
Sbjct: 56  VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 433 LLFDNENF----------------------VLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            L ++                          L+     +    I+ G+ YL E     ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLV 172
Query: 471 HRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           HRD+ + N+L+      ++ DFGL+R +++       +     + ++A E       +  
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 530 TDVFAYGVLLLEIAT 544
           +DV+++GVLL EI T
Sbjct: 233 SDVWSFGVLLWEIVT 247

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 19  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 79  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 136
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFG A+L     K  H       I ++A E  
Sbjct: 137 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+ +G FG VYKG+                      P   +E   E   +  + +
Sbjct: 24  FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 84  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 141
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 142 D---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 349 PHRFRYSDLYTATKGFK-QSEVIGTGGFGEVYKGVL--------------------PTRM 387
           P   R  ++Y   K    + + +G+G FG V KG                      P   
Sbjct: 13  PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 72
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
            E  AE   + +L + ++V + G C+ +   +LV +    G L+  L  N +  +  +  
Sbjct: 73  DELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNI 129
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
             ++  ++ G+ YL E      +HRD+ + NVL+     A++ DFGL++    D      
Sbjct: 130 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLE-IATGRRP 548
            T+    + + APE     K S  +DV+++GVL+ E  + G++P
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 349 PHRFRYSDLYTATKGFK-QSEVIGTGGFGEVYKGVL--------------------PTRM 387
           P   R  ++Y   K    + + +G+G FG V KG                      P   
Sbjct: 13  PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 72
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
            E  AE   + +L + ++V + G C+ +   +LV +    G L+  L  N +  +  +  
Sbjct: 73  DELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNI 129
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
             ++  ++ G+ YL E      +HRD+ + NVL+     A++ DFGL++    D      
Sbjct: 130 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLE-IATGRRP 548
            T+    + + APE     K S  +DV+++GVL+ E  + G++P
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR---FN 449
           E+  L  L+H ++V L      ++ L LV++Y+ +  L   L D  N +     +   F 
Sbjct: 50  EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +++G+A    Y H    Q V+HRD+K  N+LI+     +L DFGLAR       ++   V
Sbjct: 109 LLRGLA----YCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161
Query: 510 VGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           V T+ Y  P+ L  +   S   D++  G +  E+ATGR
Sbjct: 162 V-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 349 PHRFRYSDLYTATKGFK-QSEVIGTGGFGEVYKGVL--------------------PTRM 387
           P   R  ++Y   K    + + +G+G FG V KG                      P   
Sbjct: 11  PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 70
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
            E  AE   + +L + ++V + G C+ +   +LV +    G L+  L  N +  +  +  
Sbjct: 71  DELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNI 127
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
             ++  ++ G+ YL E      +HRD+ + NVL+     A++ DFGL++    D      
Sbjct: 128 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLE-IATGRRP 548
            T+    + + APE     K S  +DV+++GVL+ E  + G++P
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 24  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ + S +   N    IA G+ YL 
Sbjct: 84  PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLE 141
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD-HGKISHTTNVVGTIGYIAPELA 521
           +   + ++HRD+ + NVL+    + ++ DFG A+L     K  H       I ++A E  
Sbjct: 142 D---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 522 RTGKASCSTDVFAYGVLLLEIAT-GRRPID 550
                +  +DV++YGV + E+ T G +P D
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 356 DLYTATKGFKQSEVIGTGGFGEV----YKGVLPTRMREFAAEIESLGR------------ 399
           DL    + ++  +VIG G FGEV    +K        +  ++ E + R            
Sbjct: 63  DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 400 ---LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA 456
                   +V L    +  R L +V +Y+P G L +L+  N +    W + +      A 
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYT-----AE 176
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
            +L L        IHRDVK  N+L+D   + +L DFG     +   +      VGT  YI
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 236
Query: 517 APELART----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           +PE+ ++    G      D ++ GV L E+  G  P  +D  +
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEIESLGR-----------------LRHKHLVNLQG 410
           + +G G  GEV   V        A +I  + R                 L H+++V   G
Sbjct: 12  QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             +      L  +Y   G L   +  +        QRF     + AG++YLH      + 
Sbjct: 72  HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +    
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 530 -TDVFAYGVLLLEIATGRRPIDS 551
             DV++ G++L  +  G  P D 
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 370 IGTGGFGEVY--------KGVLPTRMR--------------EFAAEIESLGRLRHKHLVN 407
           +G G FG VY        KG   TR+               EF  E   +      H+V 
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNEN----FVLSWEQRFNIIKGIAAGLL 459
           L G   + +  L+V + + +G L S L     + EN       + ++   +   IA G+ 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+    +  +HRD+ + N ++  D   ++GDFG+ R + +          +  + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E  + G  + S+D++++GV+L EI +   +P      +  + VL+F   G  LD  D N 
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKFVMDGGYLDQPD-NC 257
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
                    E V  L  +C     + RPT  +++  L  D
Sbjct: 258 P--------ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 356 DLYTATKGFKQSEVIGTGGFGEV----YKGVLPTRMREFAAEIESLGR------------ 399
           DL    + ++  +VIG G FGEV    +K        +  ++ E + R            
Sbjct: 68  DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 400 ---LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA 456
                   +V L    +  R L +V +Y+P G L +L+  N +    W + +      A 
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYT-----AE 181
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
            +L L        IHRDVK  N+L+D   + +L DFG     +   +      VGT  YI
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 517 APELART----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           +PE+ ++    G      D ++ GV L E+  G  P  +D  +
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 28/229 (12%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL------------FDNENFVLSWEQRF 448
           +H+++VNL G C     +L++ +Y   G L + L            F   N  LS     
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTT 507
           +    +A G+ +L     +  IHRDV + NVL+     A++GDFGLAR + +        
Sbjct: 168 HFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHL 566
           N    + ++APE       +  +DV++YG+LL EI + G  P      ILV+    ++ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---ILVNSKF-YKLV 280
Query: 567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                +  P      + + M+        C   +   RPT +Q+  +L 
Sbjct: 281 KDGYQMAQPAFAPKNIYSIMQ-------ACWALEPTHRPTFQQICSFLQ 322

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 356 DLYTATKGFKQSEVIGTGGFGEV----YKGVLPTRMREFAAEIESLGR------------ 399
           DL    + ++  +VIG G FGEV    +K        +  ++ E + R            
Sbjct: 68  DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 400 ---LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA 456
                   +V L    +  R L +V +Y+P G L +L+  N +    W + +      A 
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYT-----AE 181
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
            +L L        IHRDVK  N+L+D   + +L DFG     +   +      VGT  YI
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 517 APELART----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           +PE+ ++    G      D ++ GV L E+  G  P  +D  +
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQ------ 409
           +++     F    +IG GGFGEVY        + +A +     R++ K    L       
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 410 ------GWC----------KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
                 G C               L  + D +  G L   L  +  F  + + RF   + 
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-DMRFYAAE- 300
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           I  GL ++H  +   V++RD+K  N+L+D   + R+ D GLA  F   K  H +  VGT 
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTH 354
Query: 514 GYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRP 548
           GY+APE+ + G A   S D F+ G +L ++  G  P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQ------ 409
           +++     F    +IG GGFGEVY        + +A +     R++ K    L       
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 410 ------GWC----------KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
                 G C               L  + D +  G L   L  +  F  + + RF   + 
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-DMRFYAAE- 300
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           I  GL ++H  +   V++RD+K  N+L+D   + R+ D GLA  F   K  H +  VGT 
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTH 354
Query: 514 GYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRP 548
           GY+APE+ + G A   S D F+ G +L ++  G  P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 370 IGTGGFGEVY--------KGVLPTRMR--------------EFAAEIESLGRLRHKHLVN 407
           +G G FG VY        KG   TR+               EF  E   +      H+V 
Sbjct: 22  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNEN----FVLSWEQRFNIIKGIAAGLL 459
           L G   + +  L+V + + +G L S L     + EN       + ++   +   IA G+ 
Sbjct: 82  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+    +  +HRD+ + N ++  D   ++GDFG+ R + +          +  + ++AP
Sbjct: 142 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E  + G  + S+D++++GV+L EI +   +P      +  + VL+F   G  LD  D N 
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKFVMDGGYLDQPD-NC 254
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
                    E V  L  +C     + RPT  +++  L  D
Sbjct: 255 P--------ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQ------ 409
           +++     F    +IG GGFGEVY        + +A +     R++ K    L       
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 410 ------GWC----------KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
                 G C               L  + D +  G L   L  +  F  + + RF   + 
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-DMRFYAAE- 299
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           I  GL ++H  +   V++RD+K  N+L+D   + R+ D GLA  F   K  H +  VGT 
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTH 353
Query: 514 GYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRP 548
           GY+APE+ + G A   S D F+ G +L ++  G  P
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 32/212 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI--------------ESLGR-------LRH 402
           ++  EVIG G F  V + +     ++FA +I              E L R       L+H
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSL--DSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
            H+V L         L +V++++    L  + +   +  FV S     + ++ I   L Y
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLA-RLFDHGKISHTTNVVGTIGYI 516
            H+     +IHRDVK  NVL+ +  N+   +LGDFG+A +L + G ++     VGT  ++
Sbjct: 146 CHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVA--GGRVGTPHFM 200
Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           APE+ +        DV+  GV+L  + +G  P
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLP 232

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 63  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 120
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 121 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 174
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 219

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 360 ATKGFKQSEVIGTGGFGEVYKGVLP----------------------TRMREFAAEIESL 397
           AT  ++    IG G +G VYK   P                      + +RE A  +  L
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL-LRRL 60
Query: 398 GRLRHKHLVNLQGWCKRKR-----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
               H ++V L   C   R      + LV++++ +  L + L       L  E   ++++
Sbjct: 61  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
               GL +LH      ++HRD+K  N+L+ +    +L DFGLAR++ +        VV T
Sbjct: 120 QFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LAPVVVT 174
Query: 513 IGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDV 572
           + Y APE+      +   D+++ G +  E+   R+P+   +        E   LG++ D+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS-------EADQLGKIFDL 226
Query: 573 V 573
           +
Sbjct: 227 I 227

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQ------ 409
           +++     F    +IG GGFGEVY        + +A +     R++ K    L       
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 410 ------GWC----------KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
                 G C               L  + D +  G L   L  +  F  + + RF   + 
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-DMRFYAAE- 300
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           I  GL ++H  +   V++RD+K  N+L+D   + R+ D GLA  F   K  H +  VGT 
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTH 354
Query: 514 GYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRP 548
           GY+APE+ + G A   S D F+ G +L ++  G  P
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++  Y   G+L   L       + + 
Sbjct: 84  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYS 143
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 200
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 261 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 308
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 309 LVEDLD 314

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 63  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 120
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 121 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 174
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 219

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 349 PHRFRYSDLYTATKGFK-QSEVIGTGGFGEVYKGVL--------------------PTRM 387
           P   R  ++Y   K    + + +G+G FG V KG                      P   
Sbjct: 355 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 414
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
            E  AE   + +L + ++V + G C+ +   +LV +    G L+  L  N +  +  +  
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNI 471
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
             ++  ++ G+ YL E      +HRD+ + NVL+     A++ DFGL++    D      
Sbjct: 472 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLE-IATGRRP 548
            T+    + + APE     K S  +DV+++GVL+ E  + G++P
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 47/280 (16%)
Query: 370 IGTGGFGEVY--------KGVLPTRMR--------------EFAAEIESLGRLRHKHLVN 407
           +G G FG VY        KG   TR+               EF  E   +      H+V 
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNEN----FVLSWEQRFNIIKGIAAGLL 459
           L G   + +  L+V + + +G L S L     + EN       + ++   +   IA G+ 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+    +  +HRD+ + N ++  D   ++GDFG+ R + +          +  + ++AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E  + G  + S+D++++GV+L EI +   +P      +  + VL+F   G  LD  D N 
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKFVMDGGYLDQPD-NC 257
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
                    E V  L  +C       RPT  +++  L  D
Sbjct: 258 P--------ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVGTIGYIAPE-----LAR 522
           +IHRD+K  N+L+D   N +L DFG++ +L D   I+ T +  G   Y+APE      +R
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS--IAKTRD-AGCRPYMAPERIDPSASR 203
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
            G     +DV++ G+ L E+ATGR P          W   F  L QV+    P L +S  
Sbjct: 204 QG-YDVRSDVWSLGITLYELATGRFPYPK-------WNSVFDQLTQVVKGDPPQLSNSEE 255
Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
                  +    LC  +    RP  +++L++
Sbjct: 256 REFSPSFINFVNLCLTKDESKRPKYKELLKH 286

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + IGTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 52/280 (18%)
Query: 364 FKQSEVIGTGGFGEVYKG--------VLPTRMR----EFAAEIESLGRLRHKHLVNLQG- 410
           FK+ E+IG+GGFG+V+K          +  R++    +   E+++L +L H ++V+  G 
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 411 W---------------CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
           W                 + + L +  ++   G+L+  +       L       + + I 
Sbjct: 73  WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL-ARLFDHGKISHTTNVVGTIG 514
            G+ Y+H    + +I+RD+K  N+ +      ++GDFGL   L + GK   +    GT+ 
Sbjct: 133 KGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK---GTLR 186
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD 574
           Y++PE   +       D++A G++L E+             + D   E        D+ D
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAEL-----------LHVCDTAFETSKF--FTDLRD 233
Query: 575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
             +   +   E  L+ +L      +K E RP   ++LR L
Sbjct: 234 GIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILRTL 269

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++NL G C +   L ++  Y   G+L   L       + + 
Sbjct: 84  LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYS 143
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 200
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 261 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 308
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 309 LVEDLD 314

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 79  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++  G        +  + ++ P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 312
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 313 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 337

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 349 PHRFRYSDLYTATKGFK-QSEVIGTGGFGEVYKGVL--------------------PTRM 387
           P   R  ++Y   K    + + +G+G FG V KG                      P   
Sbjct: 356 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 415
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
            E  AE   + +L + ++V + G C+ +   +LV +    G L+  L  N +  +  +  
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNI 472
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
             ++  ++ G+ YL E      +HRD+ + NVL+     A++ DFGL++    D      
Sbjct: 473 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLE-IATGRRP 548
            T+    + + APE     K S  +DV+++GVL+ E  + G++P
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 364 FKQSEVIGTGGFGEVY------------KGVLPTRMREFAAEIESLGR-------LRHKH 404
           +K   V+G G FGEV               V+  R  +   + ESL R       L H +
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +  L  + + K    LV +    G L   +   + F  S      II+ + +G+ Y H  
Sbjct: 88  IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGITYXH-- 143
Query: 465 WEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
            +  ++HRD+K  N+L+++   D N R+ DFGL+  F+  K     + +GT  YIAPE+ 
Sbjct: 144 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KXKDKIGTAYYIAPEVL 200
Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
             G      DV++ GV+L  + +G  P
Sbjct: 201 H-GTYDEKCDVWSTGVILYILLSGCPP 226

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|2PEL|A Chain A, Peanut Lectin Length = 236

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 43/259 (16%)
Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTD-NAHNVIGHAFYNKPIQMLDKSTSL 84
            F FN F+E   N  +  +   ++L  +G ++LT+ N  N +G   Y  P+++   +T  
Sbjct: 5   SFNFNSFSEG--NPAINFQGDVTVLS-NGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG- 60
Query: 85  SSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS-FPGGK-AEHYLGILNSTNDHK 142
               N +SF T F F++          G+ F ++P+ +  P G      LG+    +D K
Sbjct: 61  ----NVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGV----SDTK 112
Query: 143 PSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDP 202
            + H   +EFDT +  +E +D   +HVGI+VNS+ S+K  P           +   SG  
Sbjct: 113 GAGHFVGVEFDTYSN-SEYNDPPTDHVGIDVNSVDSVKTVP-----------WNSVSGAV 160
Query: 203 VQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSAS 262
           V+  + YD   + ++V +   N                            E +  GFSAS
Sbjct: 161 VKVTVIYDSSTKTLSVAVTNDNGD-----------ITTIAQVVDLKAKLPERVKFGFSAS 209
Query: 263 ---TGRKVSSHFILGWSFS 278
               GR++  H I  WSF+
Sbjct: 210 GSLGGRQI--HLIRSWSFT 226

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGK-ISH 505
            I   I   L +LH +    VIHRDVK  NVLI+A    +  DFG++     D  K I  
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQH 565
                     I PEL + G  S  +D+++ G+  +E+A  R P DS       W   FQ 
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDS-------WGTPFQQ 249
Query: 566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
           L QV++   P L +    AE    +     C  + ++ RPT  ++ ++
Sbjct: 250 LKQVVEEPSPQLPADKFSAEF---VDFTSQCLKKNSKERPTYPELXQH 294

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 57/296 (19%)
Query: 350 HRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGV-------------------LPTRMREF 390
           H+ R  DL         +E +G G F +++KGV                   L    R +
Sbjct: 3   HKIRNEDLIF-------NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNY 55
Query: 391 AAEI----ESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV-LSWE 445
           +         + +L HKHLV   G C    + +LV +++  GSLD+ L  N+N + + W 
Sbjct: 56  SESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW- 114
Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH 505
            +  + K +AA + +L    E  +IH +V + N+L+  + + + G+    +L D G IS 
Sbjct: 115 -KLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG-ISI 169
Query: 506 TT----NVVGTIGYIAPELARTGK-ASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW 559
           T      +   I ++ PE     K  + +TD +++G  L EI + G +P+ +        
Sbjct: 170 TVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA-------- 221
Query: 560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            L+ Q   Q  +  D +   +   AE+  ++     C   + + RP+ R ++R LN
Sbjct: 222 -LDSQRKLQFYE--DRHQLPAPKAAELANLIN---NCMDYEPDHRPSFRAIIRDLN 271

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 360 ATKGFKQSEVIGTGGFGEVYKGVLP----------------------TRMREFAAEIESL 397
           AT  ++    IG G +G VYK   P                      + +RE A  +  L
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL-LRRL 60
Query: 398 GRLRHKHLVNLQGWCKRKR-----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
               H ++V L   C   R      + LV++++ +  L + L       L  E   ++++
Sbjct: 61  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
               GL +LH      ++HRD+K  N+L+ +    +L DFGLAR++ +        VV T
Sbjct: 120 QFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPVVVT 174
Query: 513 IGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDV 572
           + Y APE+      +   D+++ G +  E+   R+P+   +        E   LG++ D+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS-------EADQLGKIFDL 226
Query: 573 V 573
           +
Sbjct: 227 I 227

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   E+  L  +RH +++ L    + K D++L+ + +  G L   L + E+  L+ ++  
Sbjct: 61  EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEAT 118
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV-LIDADM---NARLGDFGLARLFDHGKIS 504
             +K I  G+ YLH    + + H D+K  N+ L+D ++     +L DFG+A   + G  +
Sbjct: 119 QFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--N 173
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
              N+ GT  ++APE+          D+++ GV+   + +G  P
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 370 IGTGGFGEVY--------KGVLPTRMR--------------EFAAEIESLGRLRHKHLVN 407
           +G G FG VY        KG   TR+               EF  E   +      H+V 
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNEN----FVLSWEQRFNIIKGIAAGLL 459
           L G   + +  L+V + + +G L S L     + EN       + ++   +   IA G+ 
Sbjct: 85  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+    +  +HR++ + N ++  D   ++GDFG+ R +++          +  + ++AP
Sbjct: 145 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E  + G  + S+D++++GV+L EI +   +P      +  + VL+F   G  LD  D N 
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKFVMDGGYLDQPD-NC 257
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
                    E V  L  +C       RPT  +++  L  D
Sbjct: 258 P--------ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 362 KGFKQSEVIGTGGFGEVYKG--------------------VL--PTRMREFAAEIESLGR 399
           K  +  E +G G FG V +G                    VL  P  M +F  E+ ++  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           L H++L+ L G       + +V +  P GSL D L     +F+L    R+ +   +A G+
Sbjct: 68  LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF----DHGKISHTTNVVGTIG 514
            YL     +  IHRD+ + N+L+      ++GDFGL R      DH  +     V     
Sbjct: 125 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFA 179
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           + APE  +T   S ++D + +GV L E+ T G+ P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 370 IGTGGFGEVY--------KGVLPTRMR--------------EFAAEIESLGRLRHKHLVN 407
           +G G FG VY        KG   TR+               EF  E   +      H+V 
Sbjct: 26  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLF----DNEN----FVLSWEQRFNIIKGIAAGLL 459
           L G   + +  L+V + + +G L S L     + EN       + ++   +   IA G+ 
Sbjct: 86  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           YL+    +  +HR++ + N ++  D   ++GDFG+ R +++          +  + ++AP
Sbjct: 146 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E  + G  + S+D++++GV+L EI +   +P      +  + VL+F   G  LD  D N 
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG---LSNEQVLKFVMDGGYLDQPD-NC 258
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
                    E V  L  +C       RPT  +++  L  D
Sbjct: 259 P--------ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 126
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 127 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 126
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 127 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 366 QSEVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHL 405
           + + +G+G FG V KG                      P    E  AE   + +L + ++
Sbjct: 15  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V + G C+ +   +LV +    G L+  L  N +  +  +    ++  ++ G+ YL E  
Sbjct: 75  VRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEE-- 129
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIGYIAPELART 523
               +HRD+ + NVL+     A++ DFGL++    D       T+    + + APE    
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 524 GKASCSTDVFAYGVLLLE-IATGRRP 548
            K S  +DV+++GVL+ E  + G++P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKR----- 416
           K + + E IG G  G VY  +     +E A    +L +   K L+  +    R+      
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 417 -----------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                      +L +V +Y+  GSL  ++ +     +   Q   + +     L +LH   
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              VIHRD+KS N+L+  D + +L DFG        + S  + +VGT  ++APE+     
Sbjct: 137 ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKA 192
Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
                D+++ G++ +E+  G  P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 73  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 128
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 129 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 360 ATKGFKQSEVIGTGGFGEVYKGVLP----------------------TRMREFAAEIESL 397
           AT  ++    IG G +G VYK   P                      + +RE A  +  L
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL-LRRL 60
Query: 398 GRLRHKHLVNLQGWCKRKR-----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
               H ++V L   C   R      + LV++++ +  L + L       L  E   ++++
Sbjct: 61  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
               GL +LH      ++HRD+K  N+L+ +    +L DFGLAR++ +        VV T
Sbjct: 120 QFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP--VVVT 174
Query: 513 IGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDV 572
           + Y APE+      +   D+++ G +  E+   R+P+   +        E   LG++ D+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNS-------EADQLGKIFDL 226
Query: 573 V 573
           +
Sbjct: 227 I 227

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + IGTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 126
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 127 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 126
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 127 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF 183
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + IGTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 355 SDLYTATKGFKQSEVIGTGGFG----------EVYKGVLPTRMREFAAEIES-------- 396
           S+ +     F   +VIG G FG          EV+  V   + +    + E         
Sbjct: 31  SNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN 90
Query: 397 --LGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI 454
             L  ++H  LV L    +    L  V DYI  G L   L   E   L    RF   + I
Sbjct: 91  VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL-QRERCFLEPRARFYAAE-I 148
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTI 513
           A+ L YLH      +++RD+K  N+L+D+  +  L DFGL +   +H   S T+   GT 
Sbjct: 149 ASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--STTSTFCGTP 203
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS 551
            Y+APE+        + D +  G +L E+  G  P  S
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKR----- 416
           K + + E IG G  G VY  +     +E A    +L +   K L+  +    R+      
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 417 -----------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                      +L +V +Y+  GSL  ++ +     +   Q   + +     L +LH   
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              VIHRD+KS N+L+  D + +L DFG        + S  + +VGT  ++APE+     
Sbjct: 137 ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSEMVGTPYWMAPEVVTRKA 192
Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
                D+++ G++ +E+  G  P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 56  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++  G        +  + ++ P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 289
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 290 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 314

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           E+  L  ++H +++ L    + K D++L+ + +  G L   L + E+  L+ E+    +K
Sbjct: 64  EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA-----RLGDFGLARLFDHGKISHTT 507
            I  G+ YLH      + H D+K  N+++  D N      ++ DFGLA   D G  +   
Sbjct: 122 QILNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFG--NEFK 175
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 362 KGFKQSEVIGTGGFGEVYKG--------------------VL--PTRMREFAAEIESLGR 399
           K  +  E +G G FG V +G                    VL  P  M +F  E+ ++  
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           L H++L+ L G       + +V +  P GSL D L     +F+L    R+ +   +A G+
Sbjct: 78  LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF----DHGKISHTTNVVGTIG 514
            YL     +  IHRD+ + N+L+      ++GDFGL R      DH  +     V     
Sbjct: 135 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFA 189
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           + APE  +T   S ++D + +GV L E+ T G+ P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKR----- 416
           K + + E IG G  G VY  +     +E A    +L +   K L+  +    R+      
Sbjct: 21  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 417 -----------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                      +L +V +Y+  GSL  ++ +     +   Q   + +     L +LH   
Sbjct: 81  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              VIHRD+KS N+L+  D + +L DFG        + S  + +VGT  ++APE+     
Sbjct: 138 ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSXMVGTPYWMAPEVVTRKA 193
Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
                D+++ G++ +E+  G  P
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPP 216

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 69  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 124
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 125 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 368 EVIGTGGFGEVY-----------------KGVLPTRMREFAAEIESLGRLRHKHLVNLQG 410
           +V+GTG F EV                  K  L  +      EI  L +++H ++V L  
Sbjct: 24  DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
             +    L L+   +  G L    FD   E    +      +I  +   + YLH+     
Sbjct: 84  IYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LG 136
Query: 469 VIHRDVKSGNVL---IDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
           ++HRD+K  N+L   +D D    + DFGL+++ D G +  T    GT GY+APE+     
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKP 194
Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
            S + D ++ GV+   +  G  P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 69  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 124
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 125 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232

>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 43/259 (16%)
Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTD-NAHNVIGHAFYNKPIQMLDKSTSL 84
            F FN F+E   N  +  +   ++L  +G ++LT+ N  N +G   Y  P+++   +T  
Sbjct: 5   SFNFNSFSEG--NPAINFQGDVTVLS-NGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG- 60
Query: 85  SSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS-FPGGK-AEHYLGILNSTNDHK 142
               N +SF T F F++          G+ F ++P+ +  P G      LG+    +D K
Sbjct: 61  ----NVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGV----SDTK 112
Query: 143 PSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDP 202
            + H   +EFDT +  +E +D   +HVGI+VNS+ S+K  P           +   SG  
Sbjct: 113 GAGHFVGVEFDTYSN-SEYNDPPTDHVGIDVNSVDSVKTVP-----------WNSVSGAV 160
Query: 203 VQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSAS 262
           V+  + YD   + ++V +   N                            E +  GFSAS
Sbjct: 161 VKVTVIYDSSTKTLSVAVTNDNGD-----------ITTIAQVVDLKAKLPERVKFGFSAS 209
Query: 263 ---TGRKVSSHFILGWSFS 278
               GR++  H I  WSF+
Sbjct: 210 GSLGGRQI--HLIRSWSFT 226

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 91  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 146
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 147 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 203
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK+++ L G C +   L ++ +Y   G+L   L       + + 
Sbjct: 84  LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 200
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 261 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 308
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 309 LVEDLD 314

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 387 MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           + +  +E+E +  + +HK++++L G C +   L ++ +Y   G+L   L       + + 
Sbjct: 84  LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 446 QRFNIIK--------------GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD 491
              N +                +A G+ YL     Q  IHRD+ + NVL+  +   ++ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIAD 200
Query: 492 FGLARLFDH-GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPI 549
           FGLAR  ++      TTN    + ++APE       +  +DV+++GVL+ EI T G  P 
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 550 DSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQ 609
                I V+ + +    G  +D        +    E+ ++++    C H     RPT +Q
Sbjct: 261 PG---IPVEELFKLLKEGHRMD------KPANCTNELYMMMR---DCWHAVPSQRPTFKQ 308
Query: 610 VLRYLN 615
           ++  L+
Sbjct: 309 LVEDLD 314

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 368 EVIGTGGFGEVY-----------------KGVLPTRMREFAAEIESLGRLRHKHLVNLQG 410
           +V+GTG F EV                  K  L  +      EI  L +++H ++V L  
Sbjct: 24  DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
             +    L L+   +  G L    FD   E    +      +I  +   + YLH+     
Sbjct: 84  IYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LG 136
Query: 469 VIHRDVKSGNVL---IDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
           ++HRD+K  N+L   +D D    + DFGL+++ D G +  T    GT GY+APE+     
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKP 194
Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
            S + D ++ GV+   +  G  P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   E+  L  +RH +++ L    + K D++L+ + +  G L   L + E+  L+ ++  
Sbjct: 75  EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEAT 132
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV-LIDADM---NARLGDFGLARLFDHGKIS 504
             +K I  G+ YLH    + + H D+K  N+ L+D ++     +L DFG+A   + G  +
Sbjct: 133 QFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--N 187
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
              N+ GT  ++APE+          D+++ GV+   + +G  P
Sbjct: 188 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   E+  L ++ H +++ L    + + D++L+ + +  G L   L   E+  LS E+  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV-LIDADM---NARLGDFGLARLFDHGKIS 504
           + IK I  G+ YLH    + + H D+K  N+ L+D ++   + +L DFGLA   + G   
Sbjct: 119 SFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--V 173
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
              N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 130
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 131 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 76  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 131
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 132 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 77  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 132
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 133 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 189
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 240

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 68  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 123
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 124 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 180
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 231

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 130
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 131 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 362 KGFKQSEVIGTGGFGEVYKG--------------------VL--PTRMREFAAEIESLGR 399
           K  +  E +G G FG V +G                    VL  P  M +F  E+ ++  
Sbjct: 12  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           L H++L+ L G       + +V +  P GSL D L     +F+L    R+ +   +A G+
Sbjct: 72  LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF----DHGKISHTTNVVGTIG 514
            YL     +  IHRD+ + N+L+      ++GDFGL R      DH  +     V     
Sbjct: 129 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFA 183
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           + APE  +T   S ++D + +GV L E+ T G+ P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   E+  L  +RH +++ L    + K D++L+ + +  G L   L + E+  L+ ++  
Sbjct: 54  EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEAT 111
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV-LIDADM---NARLGDFGLARLFDHGKIS 504
             +K I  G+ YLH    + + H D+K  N+ L+D ++     +L DFG+A   + G  +
Sbjct: 112 QFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--N 166
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
              N+ GT  ++APE+          D+++ GV+   + +G  P
Sbjct: 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 130
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 131 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 31/214 (14%)
Query: 364 FKQSEVIGTGGFGEVY--------------------KGVLPTRMREFA---AEIESLGRL 400
           F+   V+G GG+G+V+                    K ++    ++ A   AE   L  +
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +H  +V+L    +    L L+ +Y+  G L  +  + E   +     F + + I+  L +
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFYLAE-ISMALGH 136
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH-GKISHTTNVVGTIGYIAPE 519
           LH++    +I+RD+K  N++++   + +L DFGL +   H G ++HT    GTI Y+APE
Sbjct: 137 LHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYMAPE 191
Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           +      + + D ++ G L+ ++ TG  P   ++
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 368 EVIGTGGFGEVY-----------------KGVLPTRMREFAAEIESLGRLRHKHLVNLQG 410
           +V+GTG F EV                  K  L  +      EI  L +++H ++V L  
Sbjct: 24  DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
             +    L L+   +  G L    FD   E    +      +I  +   + YLH+     
Sbjct: 84  IYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LG 136
Query: 469 VIHRDVKSGNVL---IDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
           ++HRD+K  N+L   +D D    + DFGL+++ D G +  T    GT GY+APE+     
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKP 194
Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
            S + D ++ GV+   +  G  P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 130
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 131 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKR----- 416
           K + + E IG G  G VY  +     +E A    +L +   K L+  +    R+      
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 417 -----------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                      +L +V +Y+  GSL  ++ +     +   Q   + +     L +LH   
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              VIHRD+KS N+L+  D + +L DFG        + S  + +VGT  ++APE+     
Sbjct: 137 ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSXMVGTPYWMAPEVVTRKA 192
Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
                D+++ G++ +E+  G  P
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPP 215

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 368 EVIGTGGFGEVY-----------------KGVLPTRMREFAAEIESLGRLRHKHLVNLQG 410
           +V+GTG F EV                  K  L  +      EI  L +++H ++V L  
Sbjct: 24  DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
             +    L L+   +  G L    FD   E    +      +I  +   + YLH+     
Sbjct: 84  IYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LG 136
Query: 469 VIHRDVKSGNVL---IDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
           ++HRD+K  N+L   +D D    + DFGL+++ D G +  T    GT GY+APE+     
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKP 194
Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
            S + D ++ GV+   +  G  P
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP 217

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 394 IESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
           I SL R  H  L  L    +    L  V +++  G L         F +   +RF+  + 
Sbjct: 76  ILSLAR-NHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--------MFHIQKSRRFDEARA 126
Query: 454 ------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT 507
                 I + L++LH+   + +I+RD+K  NVL+D + + +L DFG+ +      ++ T 
Sbjct: 127 RFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT-TA 182
Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
              GT  YIAPE+ +      + D +A GVLL E+  G  P ++++
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 48/266 (18%)
Query: 358 YTATKGFKQSEVIGTGGFGEVYK---------GVLPTR--MREFAAEIESLGRLRHKHLV 406
           Y A K   + ++I   GF              G +  R  + +   EI  L +L H ++V
Sbjct: 40  YYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVV 99
Query: 407 NLQGWCKRKRD--LLLVYDYIPNG------SLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
            L        +  L +V++ +  G      +L  L  D   F        ++IKGI    
Sbjct: 100 KLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ-----DLIKGIE--- 151
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            YLH    Q +IHRD+K  N+L+  D + ++ DFG++  F  G  +  +N VGT  ++AP
Sbjct: 152 -YLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTVGTPAFMAP 206
Query: 519 E-LARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSD-----HFILVDWVLEFQHLGQVL 570
           E L+ T K  +  + DV+A GV L     G+ P   +     H  +    LEF     + 
Sbjct: 207 ESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIA 266
Query: 571 D--------VVDPNLGSSYVVAEMEL 588
           +        ++D N  S  VV E++L
Sbjct: 267 EDLKDLITRMLDKNPESRIVVPEIKL 292

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 366 QSEVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHL 405
           + + +G+G FG V KG                      P    E  AE   + +L + ++
Sbjct: 15  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V + G C+ +   +LV +    G L+  L  N +  +  +    ++  ++ G+ YL E  
Sbjct: 75  VRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEE-- 129
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIGYIAPELART 523
               +HRD+ + NVL+     A++ DFGL++    D       T+    + + APE    
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 524 GKASCSTDVFAYGVLLLE-IATGRRP 548
            K S  +DV+++GVL+ E  + G++P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 366 QSEVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHL 405
           + + +G+G FG V KG                      P    E  AE   + +L + ++
Sbjct: 11  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V + G C+ +   +LV +    G L+  L  N +  +  +    ++  ++ G+ YL E  
Sbjct: 71  VRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEE-- 125
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIGYIAPELART 523
               +HRD+ + NVL+     A++ DFGL++    D       T+    + + APE    
Sbjct: 126 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 524 GKASCSTDVFAYGVLLLE-IATGRRP 548
            K S  +DV+++GVL+ E  + G++P
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKP 210

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   E+  L ++ H +++ L    + + D++L+ + +  G L   L   E+  LS E+  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV-LIDADM---NARLGDFGLARLFDHGKIS 504
           + IK I  G+ YLH    + + H D+K  N+ L+D ++   + +L DFGLA   + G   
Sbjct: 119 SFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--V 173
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
              N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   E+  L ++ H +++ L    + + D++L+ + +  G L   L   E+  LS E+  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV-LIDADM---NARLGDFGLARLFDHGKIS 504
           + IK I  G+ YLH    + + H D+K  N+ L+D ++   + +L DFGLA   + G   
Sbjct: 119 SFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--V 173
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
              N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 366 QSEVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHL 405
           + + +G+G FG V KG                      P    E  AE   + +L + ++
Sbjct: 9   EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V + G C+ +   +LV +    G L+  L  N +  +  +    ++  ++ G+ YL E  
Sbjct: 69  VRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEE-- 123
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIGYIAPELART 523
               +HRD+ + NVL+     A++ DFGL++    D       T+    + + APE    
Sbjct: 124 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 524 GKASCSTDVFAYGVLLLE-IATGRRP 548
            K S  +DV+++GVL+ E  + G++P
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKP 208

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 366 QSEVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHL 405
           + + +G+G FG V KG                      P    E  AE   + +L + ++
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V + G C+ +   +LV +    G L+  L  N +  +  +    ++  ++ G+ YL E  
Sbjct: 81  VRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEE-- 135
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIGYIAPELART 523
               +HRD+ + NVL+     A++ DFGL++    D       T+    + + APE    
Sbjct: 136 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 524 GKASCSTDVFAYGVLLLE-IATGRRP 548
            K S  +DV+++GVL+ E  + G++P
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKP 220

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 79  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 134
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 135 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 191
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 242

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 71  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 126
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 127 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   E+  L ++ H +++ L    + + D++L+ + +  G L   L   E+  LS E+  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV-LIDADM---NARLGDFGLARLFDHGKIS 504
           + IK I  G+ YLH    + + H D+K  N+ L+D ++   + +L DFGLA   + G   
Sbjct: 119 SFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--V 173
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
              N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAA--GL 458
           +H+++VNL G C     +L++ +Y   G L + L   ++ VL  +  F I    A+   L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-RRKSRVLETDPAFAIANSTASTRDL 166
Query: 459 LYLHEEWEQVV--------IHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNV 509
           L+   +  Q +        IHRDV + NVL+     A++GDFGLAR + +        N 
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQ 568
              + ++APE       +  +DV++YG+LL EI + G  P      ILV+    ++ +  
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---ILVNSKF-YKLVKD 282
Query: 569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
              +  P      + + M+        C   +   RPT +Q+  +L
Sbjct: 283 GYQMAQPAFAPKNIYSIMQ-------ACWALEPTHRPTFQQICSFL 321

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +L H+++V 
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 286
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 287 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 311

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 362 KGFKQSEVIGTGGFGEVYKG--------------------VL--PTRMREFAAEIESLGR 399
           K  +  E +G G FG V +G                    VL  P  M +F  E+ ++  
Sbjct: 12  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           L H++L+ L G       + +V +  P GSL D L     +F+L    R+ +   +A G+
Sbjct: 72  LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF----DHGKISHTTNVVGTIG 514
            YL     +  IHRD+ + N+L+      ++GDFGL R      DH  +     V     
Sbjct: 129 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFA 183
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           + APE  +T   S ++D + +GV L E+ T G+ P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 362 KGFKQSEVIGTGGFGEVYKG--------------------VL--PTRMREFAAEIESLGR 399
           K  +  E +G G FG V +G                    VL  P  M +F  E+ ++  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           L H++L+ L G       + +V +  P GSL D L     +F+L    R+ +   +A G+
Sbjct: 68  LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF----DHGKISHTTNVVGTIG 514
            YL     +  IHRD+ + N+L+      ++GDFGL R      DH  +     V     
Sbjct: 125 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFA 179
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           + APE  +T   S ++D + +GV L E+ T G+ P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   E+  L ++ H +++ L    + + D++L+ + +  G L   L   E+  LS E+  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV-LIDADM---NARLGDFGLARLFDHGKIS 504
           + IK I  G+ YLH    + + H D+K  N+ L+D ++   + +L DFGLA   + G   
Sbjct: 119 SFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--V 173
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
              N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 362 KGFKQSEVIGTGGFGEVYKG--------------------VL--PTRMREFAAEIESLGR 399
           K  +  E +G G FG V +G                    VL  P  M +F  E+ ++  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           L H++L+ L G       + +V +  P GSL D L     +F+L    R+ +   +A G+
Sbjct: 68  LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF----DHGKISHTTNVVGTIG 514
            YL     +  IHRD+ + N+L+      ++GDFGL R      DH  +     V     
Sbjct: 125 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFA 179
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           + APE  +T   S ++D + +GV L E+ T G+ P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +       L   +    LS +  
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH----LSNDHI 130
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 131 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 52/216 (24%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNLQG-- 410
           E IG G FGEV++G    R  E A               AEI     LRH++++      
Sbjct: 35  ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 411 ------WCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHE 463
                 W +    L LV DY  +GSL    FD  N + ++ E    +    A+GL +LH 
Sbjct: 93  NKDNGTWTQ----LWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 144
Query: 464 E-----WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-----VGTI 513
           E      +  + HRD+KS N+L+  +    + D GLA    H   + T ++     VGT 
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 202
Query: 514 GYIAPEL------ARTGKASCSTDVFAYGVLLLEIA 543
            Y+APE+       +  ++    D++A G++  EIA
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 28/201 (13%)
Query: 370 IGTGGFGEVY---------KGVLPT--------RMREFAAEIESLGRLRHKHLVNLQGWC 412
           +G+G FG+V+         + V+ T         M +  AEIE L  L H +++ +    
Sbjct: 30  LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
           +   ++ +V +    G L   +   +     LS      ++K +   L Y H    Q V+
Sbjct: 90  EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVV 146
Query: 471 HRDVKSGNVLI-DADMNA--RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
           H+D+K  N+L  D   ++  ++ DFGLA LF   +  H+TN  GT  Y+APE+ +    +
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE--HSTNAAGTALYMAPEVFKRD-VT 203
Query: 528 CSTDVFAYGVLLLEIATGRRP 548
              D+++ GV++  + TG  P
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLP 224

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 362 KGFKQSEVIGTGGFGEVYKG--------------------VL--PTRMREFAAEIESLGR 399
           K  +  E +G G FG V +G                    VL  P  M +F  E+ ++  
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           L H++L+ L G       + +V +  P GSL D L     +F+L    R+ +   +A G+
Sbjct: 78  LDHRNLIRLYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF----DHGKISHTTNVVGTIG 514
            YL     +  IHRD+ + N+L+      ++GDFGL R      DH  +     V     
Sbjct: 135 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFA 189
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           + APE  +T   S ++D + +GV L E+ T G+ P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 370 IGTGGFGEVYKGVLPTRMR-------------------EFAAEIESLGRLRHKHLVNLQG 410
           +G G FG V +GV   R +                   E   E + + +L + ++V L G
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLF-DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
            C+ +  L+LV +    G L   L    E   +S      ++  ++ G+ YL E   +  
Sbjct: 78  VCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEE---KNF 131
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGKAS 527
           +HRD+ + NVL+     A++ DFGL++        +T    G   + + APE     K S
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 528 CSTDVFAYGVLLLE-IATGRRP 548
             +DV++YGV + E ++ G++P
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKP 213

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 52/216 (24%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNLQG-- 410
           E IG G FGEV++G    R  E A               AEI     LRH++++      
Sbjct: 48  ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 411 ------WCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHE 463
                 W +    L LV DY  +GSL    FD  N + ++ E    +    A+GL +LH 
Sbjct: 106 NKDNGTWTQ----LWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 157
Query: 464 E-----WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-----VGTI 513
           E      +  + HRD+KS N+L+  +    + D GLA    H   + T ++     VGT 
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 215
Query: 514 GYIAPEL------ARTGKASCSTDVFAYGVLLLEIA 543
            Y+APE+       +  ++    D++A G++  EIA
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL-------FDNEN-FVLSWEQRFNIIK 452
           +H+++VNL G C     +L++ +Y   G L + L        D E+   L      +   
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVG 511
            +A G+ +L     +  IHRDV + NVL+     A++GDFGLAR + +        N   
Sbjct: 160 QVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVL 570
            + ++APE       +  +DV++YG+LL EI + G  P      ILV+    ++ +    
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---ILVNSKF-YKLVKDGY 272
Query: 571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            +  P      + + M+        C   +   RPT +Q+  +L 
Sbjct: 273 QMAQPAFAPKNIYSIMQ-------ACWALEPTHRPTFQQICSFLQ 310

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ LV  ++    L  LL       LS +  
Sbjct: 91  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLLKTQH---LSNDHI 146
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 147 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 203
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
            T  V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 52/216 (24%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNLQG-- 410
           E IG G FGEV++G    R  E A               AEI     LRH++++      
Sbjct: 9   ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 411 ------WCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHE 463
                 W +    L LV DY  +GSL    FD  N + ++ E    +    A+GL +LH 
Sbjct: 67  NKDNGTWTQ----LWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 118
Query: 464 E-----WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-----VGTI 513
           E      +  + HRD+KS N+L+  +    + D GLA    H   + T ++     VGT 
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 176
Query: 514 GYIAPEL------ARTGKASCSTDVFAYGVLLLEIA 543
            Y+APE+       +  ++    D++A G++  EIA
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 52/216 (24%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNLQG-- 410
           E IG G FGEV++G    R  E A               AEI     LRH++++      
Sbjct: 10  ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 411 ------WCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHE 463
                 W +    L LV DY  +GSL    FD  N + ++ E    +    A+GL +LH 
Sbjct: 68  NKDNGTWTQ----LWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 119
Query: 464 E-----WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-----VGTI 513
           E      +  + HRD+KS N+L+  +    + D GLA    H   + T ++     VGT 
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 177
Query: 514 GYIAPEL------ARTGKASCSTDVFAYGVLLLEIA 543
            Y+APE+       +  ++    D++A G++  EIA
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           E   E+  L ++ H +++ L    + + D++L+ + +  G L   L   E+  LS E+  
Sbjct: 61  EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEAT 118
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNV-LIDADM---NARLGDFGLARLFDHGKIS 504
           + IK I  G+ YLH    + + H D+K  N+ L+D ++   + +L DFGLA   + G   
Sbjct: 119 SFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG--V 173
Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
              N+ GT  ++APE+          D+++ GV+   + +G  P   D
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 43/245 (17%)
Query: 357 LYTATKGFKQSEVIGTGGFGEVYK-----------------------GVLPTRMREFAAE 393
           L  A + ++    IG G +G+V+K                       G+  + +RE A  
Sbjct: 6   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 394 IESLGRLRHKHLVNLQGWC-----KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           +  L    H ++V L   C      R+  L LV++++ +  L + L       +  E   
Sbjct: 65  LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN 508
           +++  +  GL +LH      V+HRD+K  N+L+ +    +L DFGLAR++        T+
Sbjct: 124 DMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ 568
           VV T+ Y APE+      +   D+++ G +  E+   R+P       L     +   LG+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP-------LFRGSSDVDQLGK 230
Query: 569 VLDVV 573
           +LDV+
Sbjct: 231 ILDVI 235

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 52/216 (24%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNLQG-- 410
           E IG G FGEV++G    R  E A               AEI     LRH++++      
Sbjct: 15  ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 411 ------WCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHE 463
                 W +    L LV DY  +GSL    FD  N + ++ E    +    A+GL +LH 
Sbjct: 73  NKDNGTWTQ----LWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 124
Query: 464 E-----WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-----VGTI 513
           E      +  + HRD+KS N+L+  +    + D GLA    H   + T ++     VGT 
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 182
Query: 514 GYIAPEL------ARTGKASCSTDVFAYGVLLLEIA 543
            Y+APE+       +  ++    D++A G++  EIA
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI------ESLGRLRHK-------------H 404
           F++ + +GTG FG V           FA +I        L ++ H               
Sbjct: 43  FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +L H+++V 
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 272
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 273 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 297

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 36  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 96  LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 152
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 153 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 206
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 52/216 (24%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNLQG-- 410
           E IG G FGEV++G    R  E A               AEI     LRH++++      
Sbjct: 12  ESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 411 ------WCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHE 463
                 W +    L LV DY  +GSL    FD  N + ++ E    +    A+GL +LH 
Sbjct: 70  NKDNGTWTQ----LWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHM 121
Query: 464 E-----WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-----VGTI 513
           E      +  + HRD+KS N+L+  +    + D GLA    H   + T ++     VGT 
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 179
Query: 514 GYIAPEL------ARTGKASCSTDVFAYGVLLLEIA 543
            Y+APE+       +  ++    D++A G++  EIA
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL-------FDNEN-FVLSWEQRFNIIK 452
           +H+++VNL G C     +L++ +Y   G L + L        D E+   L      +   
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVG 511
            +A G+ +L     +  IHRDV + NVL+     A++GDFGLAR + +        N   
Sbjct: 168 QVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVL 570
            + ++APE       +  +DV++YG+LL EI + G  P      ILV+    ++ +    
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---ILVNSKF-YKLVKDGY 280
Query: 571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            +  P      + + M+        C   +   RPT +Q+  +L 
Sbjct: 281 QMAQPAFAPKNIYSIMQ-------ACWALEPTHRPTFQQICSFLQ 318

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWTLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 29  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 89  LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 145
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 146 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWTLCGTPEYLAPEIILSK 199
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 232

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI------ESLGRLRHK-------------H 404
           F++ + +GTG FG V           FA +I        L ++ H               
Sbjct: 43  FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI------ESLGRLRHK-------------H 404
           F++ + +GTG FG V           FA +I        L ++ H               
Sbjct: 43  FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 43/84 (51%)
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           HRDVK  N+L+ AD  A L DFG+A      K++   N VGT+ Y APE      A+   
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 531 DVFAYGVLLLEIATGRRPIDSDHF 554
           D++A   +L E  TG  P   D  
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQL 240

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 44/221 (19%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKG----------VLPTR-----MREFAAEIESLGRLRHK 403
           T  +     E +G G +GEV++G          +  +R      RE   E+ +   LRH+
Sbjct: 5   TVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHE 62
Query: 404 HLVNLQGWCKRKR----DLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           +++         R     L L+  Y   GSL D L     + V        I+  IA+GL
Sbjct: 63  NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGL 118
Query: 459 LYLHEEW-----EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV---- 509
            +LH E      +  + HRD+KS N+L+  +    + D GLA +  H + ++  +V    
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM--HSQSTNQLDVGNNP 176
Query: 510 -VGTIGYIAPE-LARTGKASC-----STDVFAYGVLLLEIA 543
            VGT  Y+APE L  T +  C       D++A+G++L E+A
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 23/165 (13%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN--- 449
           E+  L +L H +++ L  + + KR+  LV +    G L    FD     +   Q+F+   
Sbjct: 71  EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDE----IILRQKFSEVD 122
Query: 450 ---IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKI 503
              I+K + +G  YLH+     ++HRD+K  N+L+++   D   ++ DFGL+  F+ G  
Sbjct: 123 AAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-- 177
Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
                 +GT  YIAPE+ R  K     DV++ GV+L  +  G  P
Sbjct: 178 GKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 44/212 (20%)
Query: 368 EVIGTGGFGEVYKG----------VLPTR-----MREFAAEIESLGRLRHKHLVNLQGWC 412
           E +G G +GEV++G          +  +R      RE   E+ +   LRH++++      
Sbjct: 14  ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASD 71
Query: 413 KRKR----DLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW-- 465
              R     L L+  Y   GSL D L     + V        I+  IA+GL +LH E   
Sbjct: 72  MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHIEIFG 127
Query: 466 ---EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-----VGTIGYIA 517
              +  + HRD+KS N+L+  +    + D GLA +  H + ++  +V     VGT  Y+A
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM--HSQSTNQLDVGNNPRVGTKRYMA 185
Query: 518 PE-LARTGKASC-----STDVFAYGVLLLEIA 543
           PE L  T +  C       D++A+G++L E+A
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDH---------GKISHTTNVVGTIGYIAPE 519
           VIHRD+K  N+LI+++ + ++ DFGLAR+ D          G+ S  T  V T  Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 520 LART-GKASCSTDVFAYGVLLLEIATGRRPI 549
           +  T  K S + DV++ G +L E+   RRPI
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDH---------GKISHTTNVVGTIGYIAPE 519
           VIHRD+K  N+LI+++ + ++ DFGLAR+ D          G+ S  T  V T  Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 520 LART-GKASCSTDVFAYGVLLLEIATGRRPI 549
           +  T  K S + DV++ G +L E+   RRPI
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 35/226 (15%)
Query: 353 RYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-- 399
           ++SD Y         E +G G F  V + V  T   EFAA+I           + L R  
Sbjct: 26  KFSDNYDV------KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 400 -----LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI 454
                L+H ++V L    + +    LV+D +  G L   +   E +  S     + I+ I
Sbjct: 80  RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQI 137
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVG 511
              + Y H      ++HR++K  N+L+ +       +L DFGLA   +  +  H     G
Sbjct: 138 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--GFAG 192
Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
           T GY++PE+ +    S   D++A GV+L  +  G  P  D D   L
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 238

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 36  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 96  LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 152
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 153 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 206
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 28/218 (12%)
Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-------LRH 402
           T  ++  E +G G F  V + V  T  +E+AA+I           + L R       L+H
Sbjct: 30  TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V L      +    LV+D +  G L   +   E +  S     + I  I   + ++H
Sbjct: 90  PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY--SEADASHCIHQILESVNHIH 147
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           +     ++HRD+K  N+L+ +       +L DFGLA +   G+        GT GY++PE
Sbjct: 148 Q---HDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPE 203
Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
           + R        D++A GV+L  +  G  P  D D   L
Sbjct: 204 VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKL 241

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 367 SEVIGTGGFGEVYKGVLPTRMREFAAEI--------ESLGRLRHK-----------HLVN 407
           S+ +G G F  V + +  +  +E+AA+         +    + H+            ++N
Sbjct: 34  SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L    +   +++L+ +Y   G + SL       ++S      +IK I  G+ YLH   + 
Sbjct: 94  LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QN 150
Query: 468 VVIHRDVKSGNVLIDADM---NARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
            ++H D+K  N+L+ +     + ++ DFG++R   H        ++GT  Y+APE+    
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA--CELREIMGTPEYLAPEILNYD 208
Query: 525 KASCSTDVFAYGVLLLEIATGRRP 548
             + +TD++  G++   + T   P
Sbjct: 209 PITTATDMWNIGIIAYMLLTHTSP 232

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-------LRH 402
           +  +   E +G G F  V + V  T   EFAA+I           + L R       L+H
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V L    + +    LV+D +  G L   +   E +  S     + I+ I   + Y H
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQILESIAYCH 122
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
                 ++HR++K  N+L+ +       +L DFGLA   +  +  H     GT GY++PE
Sbjct: 123 S---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPE 177
Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
           + +    S   D++A GV+L  +  G  P  D D   L
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 215

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EI  L +L+H +LVNL    +RKR L LV++Y  +  L  L    + +     +  +++K
Sbjct: 52  EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL----DRYQRGVPE--HLVK 105
Query: 453 GIAAGLL----YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN 508
            I    L    + H   +   IHRDVK  N+LI      +L DFG ARL   G   +  +
Sbjct: 106 SITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDD 161
Query: 509 VVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATG 545
            V T  Y +PE L    +     DV+A G +  E+ +G
Sbjct: 162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 38/223 (17%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVL---PTRMREFAA----------EIESLGRLRHKHL 405
           T  +     E +G G +GEV++G+       ++ F++          EI +   LRH ++
Sbjct: 5   TVARQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNI 64
Query: 406 VNLQGWCKRKRD----LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           +         R+    L L+  Y  +GSL   L   +   L       +    A GL +L
Sbjct: 65  LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACGLAHL 121
Query: 462 HEEW-----EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK----ISHTTNVVGT 512
           H E      +  + HRD KS NVL+ +++   + D GLA +   G     I +    VGT
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR-VGT 180
Query: 513 IGYIAPE-LARTGKASC-----STDVFAYGVLLLEIATGRRPI 549
             Y+APE L    +  C      TD++A+G++L EIA  RR I
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA--RRTI 221

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 367 SEVIGTGGFGEVYKGVLPTRMRE--------------------FAAEIESLGRLRHKHLV 406
           + ++G G FGEVY+GV      E                    F +E   +  L H H+V
Sbjct: 29  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G  + +   +++  Y P G L   L  N+N +         ++ I   + YL    E
Sbjct: 89  KLIGIIEEEPTWIIMELY-PYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYL----E 142
Query: 467 QV-VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
            +  +HRD+   N+L+ +    +LGDFGL+R  +       +     I +++PE     +
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 526 ASCSTDVFAYGVLLLEIAT-GRRP 548
            + ++DV+ + V + EI + G++P
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQP 226

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 367 SEVIGTGGFGEVYKGVLPTRMRE--------------------FAAEIESLGRLRHKHLV 406
           + ++G G FGEVY+GV      E                    F +E   +  L H H+V
Sbjct: 13  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G  + +   +++  Y P G L   L  N+N +         ++ I   + YL    E
Sbjct: 73  KLIGIIEEEPTWIIMELY-PYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYL----E 126
Query: 467 QV-VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
            +  +HRD+   N+L+ +    +LGDFGL+R  +       +     I +++PE     +
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 526 ASCSTDVFAYGVLLLEIAT-GRRP 548
            + ++DV+ + V + EI + G++P
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQP 210

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 44/212 (20%)
Query: 368 EVIGTGGFGEVYKG----------VLPTR-----MREFAAEIESLGRLRHKHLVNLQGWC 412
           E +G G +GEV++G          +  +R      RE   E+ +   LRH++++      
Sbjct: 43  ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASD 100
Query: 413 KRKR----DLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW-- 465
              R     L L+  Y   GSL D L     + V        I+  IA+GL +LH E   
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHIEIFG 156
Query: 466 ---EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-----VGTIGYIA 517
              +  + HRD+KS N+L+  +    + D GLA +  H + ++  +V     VGT  Y+A
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM--HSQSTNQLDVGNNPRVGTKRYMA 214
Query: 518 PE-LARTGKASC-----STDVFAYGVLLLEIA 543
           PE L  T +  C       D++A+G++L E+A
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA GL +L     + +I+RD+K  NV++D++ + ++ DFG+ +      ++ T    GT 
Sbjct: 130 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT-TKXFCGTP 185
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
            YIAPE+        S D +A+GVLL E+  G+ P + +
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-------LRH 402
           +  +   E +G G F  V + V  T   EFAA+I           + L R       L+H
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V L    + +    LV+D +  G L   +   E +  S     + I+ I   + Y H
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQILESIAYCH 122
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
                 ++HR++K  N+L+ +       +L DFGLA   +  +  H     GT GY++PE
Sbjct: 123 S---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPE 177
Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
           + +    S   D++A GV+L  +  G  P  D D   L
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 215

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-------LRH 402
           +  +   E +G G F  V + V  T   EFAA+I           + L R       L+H
Sbjct: 4   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V L    + +    LV+D +  G L   +   E +  S     + I+ I   + Y H
Sbjct: 64  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY--SEADASHCIQQILESIAYCH 121
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
                 ++HR++K  N+L+ +       +L DFGLA   +  +  H     GT GY++PE
Sbjct: 122 S---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPE 176
Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
           + +    S   D++A GV+L  +  G  P  D D   L
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL 214

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           IA GL +L     + +I+RD+K  NV++D++ + ++ DFG+ +      ++ T    GT 
Sbjct: 451 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT-TKXFCGTP 506
Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
            YIAPE+        S D +A+GVLL E+  G+ P + +
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 64  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 180
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 234
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 367 SEVIGTGGFGEVYKGVLPTRMRE--------------------FAAEIESLGRLRHKHLV 406
           + ++G G FGEVY+GV      E                    F +E   +  L H H+V
Sbjct: 17  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G  + +   +++  Y P G L   L  N+N +         ++ I   + YL    E
Sbjct: 77  KLIGIIEEEPTWIIMELY-PYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYL----E 130
Query: 467 QV-VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
            +  +HRD+   N+L+ +    +LGDFGL+R  +       +     I +++PE     +
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 526 ASCSTDVFAYGVLLLEIAT-GRRP 548
            + ++DV+ + V + EI + G++P
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQP 214

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKR----- 416
           K + + E IG G  G VY  +     +E A    +L +   K L+  +    R+      
Sbjct: 21  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 417 -----------DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                      +L +V +Y+  GSL  ++ +     +   Q   + +     L +LH   
Sbjct: 81  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              VIHR++KS N+L+  D + +L DFG        + S  + +VGT  ++APE+     
Sbjct: 138 ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKA 193
Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
                D+++ G++ +E+  G  P
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPP 216

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 43/245 (17%)
Query: 357 LYTATKGFKQSEVIGTGGFGEVYK-----------------------GVLPTRMREFAAE 393
           L  A + ++    IG G +G+V+K                       G+  + +RE A  
Sbjct: 6   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 394 IESLGRLRHKHLVNLQGWC-----KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           +  L    H ++V L   C      R+  L LV++++ +  L + L       +  E   
Sbjct: 65  LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN 508
           +++  +  GL +LH      V+HRD+K  N+L+ +    +L DFGLAR++        T+
Sbjct: 124 DMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ 568
           VV T+ Y APE+      +   D+++ G +  E+   R+P       L     +   LG+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP-------LFRGSSDVDQLGK 230
Query: 569 VLDVV 573
           +LDV+
Sbjct: 231 ILDVI 235

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 23/165 (13%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN--- 449
           E+  L +L H +++ L  + + KR+  LV +    G L    FD     +   Q+F+   
Sbjct: 54  EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDE----IILRQKFSEVD 105
Query: 450 ---IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKI 503
              I+K + +G  YLH+     ++HRD+K  N+L+++   D   ++ DFGL+  F+ G  
Sbjct: 106 AAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-- 160
Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
                 +GT  YIAPE+ R  K     DV++ GV+L  +  G  P
Sbjct: 161 GKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 286
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 287 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 311

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 54/241 (22%)
Query: 368 EVIGTGGFGEVYKG-------------VLPTRMREFA---------AEIESLGRL-RHKH 404
           +V+G+G FG+V                V    ++E A         +E++ + +L  H++
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSL-------------DSLLFDNENF--------VLS 443
           +VNL G C     + L+++Y   G L             D + ++N+          VL+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGK 502
           +E        +A G+ +L     +  +HRD+ + NVL+      ++ DFGLAR +     
Sbjct: 171 FEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI-ATGRR-----PIDSDHFIL 556
                N    + ++APE    G  +  +DV++YG+LL EI + G       P+D++ + L
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKL 287
Query: 557 V 557
           +
Sbjct: 288 I 288

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 17/167 (10%)
Query: 383 LPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVL 442
           + ++  +F  E++ +  +++++ +  +G      ++ ++Y+Y+ N S+  L FD   FVL
Sbjct: 83  IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI--LKFDEYFFVL 140
Query: 443 SWEQR----FNIIKGIAAGLL----YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL 494
                      +IK I   +L    Y+H E  + + HRDVK  N+L+D +   +L DFG 
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGE 198
Query: 495 ARLFDHGKISHTTNVVGTIGYIAPEL--ARTGKASCSTDVFAYGVLL 539
           +      KI  +    GT  ++ PE     +       D+++ G+ L
Sbjct: 199 SEYMVDKKIKGSR---GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 28/220 (12%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-------L 400
           + T  ++  E IG G F  V + V      E+AA+I           + L R       L
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +H ++V L      +    LV+D +  G L   +   E +  S     + I+ I   +L+
Sbjct: 61  KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY--SEADASHCIQQILEAVLH 118
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            H+     V+HRD+K  N+L+ +       +L DFGLA +   G         GT GY++
Sbjct: 119 CHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
           PE+ R        D++A GV+L  +  G  P  D D   L
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKL 214

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 108/277 (38%), Gaps = 47/277 (16%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 98  CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 271
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           G  Y +            C   + E RP    +L  +
Sbjct: 272 GPVYRIMTQ---------CWQHQPEDRPNFAIILERI 299

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 364 FKQSEVIGTGGFGEVY--------------------KGVLPTRMREFA---AEIESLGRL 400
           F+   V+G GG+G+V+                    K ++    ++ A   AE   L  +
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +H  +V+L    +    L L+ +Y+  G L  +  + E   +     F + + I+  L +
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFYLAE-ISMALGH 136
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH-GKISHTTNVVGTIGYIAPE 519
           LH++    +I+RD+K  N++++   + +L DFGL +   H G ++H     GTI Y+APE
Sbjct: 137 LHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX--FCGTIEYMAPE 191
Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           +      + + D ++ G L+ ++ TG  P   ++
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 43/245 (17%)
Query: 357 LYTATKGFKQSEVIGTGGFGEVYK-----------------------GVLPTRMREFAAE 393
           L  A + ++    IG G +G+V+K                       G+  + +RE A  
Sbjct: 6   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 394 IESLGRLRHKHLVNLQGWC-----KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF 448
           +  L    H ++V L   C      R+  L LV++++ +  L + L       +  E   
Sbjct: 65  LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN 508
           +++  +  GL +LH      V+HRD+K  N+L+ +    +L DFGLAR++        T+
Sbjct: 124 DMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ 568
           VV T+ Y APE+      +   D+++ G +  E+   R+P       L     +   LG+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP-------LFRGSSDVDQLGK 230
Query: 569 VLDVV 573
           +LDV+
Sbjct: 231 ILDVI 235

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 45  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 278
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 279 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 303

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 55  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 288
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 289 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 313

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 286
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 287 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 311

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 272
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 273 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 297

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 75  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 130
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 131 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
               V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCK-----RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
           EI+ L R RH++++ +    +     + +D+ +V D +    L  LL       LS +  
Sbjct: 76  EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQH---LSNDHI 131
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISH 505
              +  I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH     
Sbjct: 132 CYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 506 TTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
               V T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 108/277 (38%), Gaps = 47/277 (16%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 98  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 271
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           G  Y +            C   + E RP    +L  +
Sbjct: 272 GPVYRIMTQ---------CWQHQPEDRPNFAIILERI 299

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 30  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 90  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 263
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 264 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 288

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 65  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 463 EEWEQVVIHRDVKSGNVLIDAD---MNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+AR ++           +  + ++ P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 298
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 299 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 323

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 17  CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     F L           ++  L YL     + 
Sbjct: 77  IG-VITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLES---KR 131
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 192 ASDVWMFGVCMWEI 205

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 57/296 (19%)
Query: 350 HRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGV-------------------LPTRMREF 390
           H+ R  DL         +E +G G F +++KGV                   L    R +
Sbjct: 3   HKIRNEDLIF-------NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNY 55
Query: 391 AAEI----ESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV-LSWE 445
           +         + +L HKHLV   G C    + +LV +++  GSLD+ L  N+N + + W 
Sbjct: 56  SESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW- 114
Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH 505
            +  + K +A  + +L    E  +IH +V + N+L+  + + + G+    +L D G IS 
Sbjct: 115 -KLEVAKQLAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG-ISI 169
Query: 506 TT----NVVGTIGYIAPELARTGK-ASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW 559
           T      +   I ++ PE     K  + +TD +++G  L EI + G +P+ +        
Sbjct: 170 TVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA-------- 221
Query: 560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            L+ Q   Q  +  D +   +   AE+  ++     C   + + RP+ R ++R LN
Sbjct: 222 -LDSQRKLQFYE--DRHQLPAPKAAELANLIN---NCMDYEPDHRPSFRAIIRDLN 271

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 17  CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     F L           ++  L YL     + 
Sbjct: 77  IG-VITENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLES---KR 131
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ A    +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 192 ASDVWMFGVCMWEI 205

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 369 VIGTGGFGEVYKGVLP-TRMRE---------------FAAEIESLGRLRHKHLVNLQGWC 412
            IG G +GEV   V   TR+R                F  EIE +  L H +++ L    
Sbjct: 33  TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHR 472
           +   D+ LV +    G L   +     F  S   R  I+K + + + Y H+     V HR
Sbjct: 93  EDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCHK---LNVAHR 147
Query: 473 DVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           D+K  N L      D   +L DFGLA  F  GK+  T   VGT  Y++P++   G     
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLE-GLYGPE 204
Query: 530 TDVFAYGVLLLEIATGRRPIDS 551
            D ++ GV++  +  G  P  +
Sbjct: 205 CDEWSAGVMMYVLLCGYPPFSA 226

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL--------------FDNENFVLSWEQ 446
           +H+++VNL G C     +L++ +Y   G L + L                N    LS   
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISH 505
             +    +A G+ +L     +  IHRDV + NVL+     A++GDFGLAR + +      
Sbjct: 168 LLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQ 564
             N    + ++APE       +  +DV++YG+LL EI + G  P      ILV+    ++
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---ILVNSKF-YK 280
Query: 565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            +     +  P      + + M+        C   +   RPT +Q+  +L
Sbjct: 281 LVKDGYQMAQPAFAPKNIYSIMQ-------ACWALEPTHRPTFQQICSFL 323

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFGLA+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 368 EVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-------LRHKHLVNLQ 409
           E +G G F  V + V     +E+AA+I           + L R       L+H ++V L 
Sbjct: 28  EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
                +    L++D +  G L   +   E +  S     + I+ I   +L+ H+     V
Sbjct: 88  DSISEEGHHYLIFDLVTGGELFEDIVAREYY--SEADASHCIQQILEAVLHCHQ---MGV 142
Query: 470 IHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
           +HRD+K  N+L+ + +     +L DFGLA   + G+        GT GY++PE+ R    
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 527 SCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
               D++A GV+L  +  G  P  D D   L
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWDEDQHRL 232

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 369 VIGTGGFGEVYKGVLP-TRMRE---------------FAAEIESLGRLRHKHLVNLQGWC 412
            IG G +GEV   V   TR+R                F  EIE +  L H +++ L    
Sbjct: 16  TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHR 472
           +   D+ LV +    G L   +     F  S   R  I+K + + + Y H+     V HR
Sbjct: 76  EDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCHK---LNVAHR 130
Query: 473 DVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           D+K  N L      D   +L DFGLA  F  GK+  T   VGT  Y++P++   G     
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLE-GLYGPE 187
Query: 530 TDVFAYGVLLLEIATGRRPIDS 551
            D ++ GV++  +  G  P  +
Sbjct: 188 CDEWSAGVMMYVLLCGYPPFSA 209

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVG 511
           I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH      T  V 
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 512 TIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L +V +++  G+L  ++       ++ EQ   +   +   L YLH    Q VIHRD+KS
Sbjct: 116 ELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYLHN---QGVIHRDIKS 169
Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
            ++L+ +D   +L DFG        ++     +VGT  ++APE+          D+++ G
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSK-EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLG 228
Query: 537 VLLLEIATGRRP 548
           ++++E+  G  P
Sbjct: 229 IMVIEMIDGEPP 240

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 370 IGTGGFGEVYKGVLPTRMR-------------------EFAAEIESLGRLRHKHLVNLQG 410
           +G G FG V +GV   R +                   E   E + + +L + ++V L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLF-DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
            C+ +  L+LV +    G L   L    E   +S      ++  ++ G+ YL E   +  
Sbjct: 404 VCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEE---KNF 457
Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGKAS 527
           +HR++ + NVL+     A++ DFGL++        +T    G   + + APE     K S
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 528 CSTDVFAYGVLLLE-IATGRRP 548
             +DV++YGV + E ++ G++P
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKP 539

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     F L           ++  L YL     + 
Sbjct: 457 IGVIT-ENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLES---KR 511
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ A    +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 572 ASDVWMFGVCMWEI 585

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFGLA+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------I 454
           RH  L  L+   +    L  V +Y   G L         F LS E+ F+  +       I
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--------FFHLSRERVFSEDRARFYGAEI 260
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
            + L YLH E  + V++RD+K  N+++D D + ++ DFGL +       +  T   GT  
Sbjct: 261 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPE 317
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
           Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 365

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     F L           ++  L YL     + 
Sbjct: 457 IGVIT-ENPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLES---KR 511
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 571
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 572 ASDVWMFGVCMWEI 585

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------I 454
           RH  L  L+   +    L  V +Y   G L         F LS E+ F+  +       I
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--------FFHLSRERVFSEDRARFYGAEI 257
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
            + L YLH E  + V++RD+K  N+++D D + ++ DFGL +       +  T   GT  
Sbjct: 258 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPE 314
Query: 515 YIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
           Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVG 511
           I  GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+   DH      T  V 
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 512 TIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
           T  Y APE+    K  + S D+++ G +L E+ + R      H++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDH---------GKISHTTNVVGTIGYIAPE 519
           VIHRD+K  N+LI+++ + ++ DFGLAR+ D          G+ S     V T  Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 520 LART-GKASCSTDVFAYGVLLLEIATGRRPI 549
           +  T  K S + DV++ G +L E+   RRPI
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 364 FKQSEVIGTGGFGEVYKGV--------------LPTR---MREFAAEIESLGRLRHKHLV 406
           F+  + +G GGFG V++                LP R     +   E+++L +L H  +V
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 407 N-LQGWCKRKRDLLL------VYDYIP-NGSLDSLLFDNENFVLSWEQR-----FNIIKG 453
                W ++     L      VY YI         L D  N   + E+R      +I   
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT------- 506
           IA  + +LH +    ++HRD+K  N+    D   ++GDFGL    D  +   T       
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 507 ----TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
               T  VGT  Y++PE       S   D+F+ G++L E+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------I 454
           RH  L  L+   +    L  V +Y   G L         F LS E+ F+  +       I
Sbjct: 68  RHPFLTALKYSFQTHDRLCFVMEYANGGEL--------FFHLSRERVFSEDRARFYGAEI 119
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR--LFDHGKISHTTNVVGT 512
            + L YLH E  + V++RD+K  N+++D D + ++ DFGL +  + D   +       GT
Sbjct: 120 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK---XFCGT 174
Query: 513 IGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
             Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 224

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------I 454
           RH  L  L+   +    L  V +Y   G L         F LS E+ F+  +       I
Sbjct: 66  RHPFLTALKYSFQTHDRLCFVMEYANGGEL--------FFHLSRERVFSEDRARFYGAEI 117
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR--LFDHGKISHTTNVVGT 512
            + L YLH E  + V++RD+K  N+++D D + ++ DFGL +  + D   +       GT
Sbjct: 118 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK---XFCGT 172
Query: 513 IGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
             Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 222

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 45  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     + L           ++  L YL     + 
Sbjct: 105 IG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---KR 159
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 220 ASDVWMFGVCMWEI 233

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------I 454
           RH  L  L+   +    L  V +Y   G L         F LS E+ F+  +       I
Sbjct: 67  RHPFLTALKYSFQTHDRLCFVMEYANGGEL--------FFHLSRERVFSEDRARFYGAEI 118
Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR--LFDHGKISHTTNVVGT 512
            + L YLH E  + V++RD+K  N+++D D + ++ DFGL +  + D   +       GT
Sbjct: 119 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK---XFCGT 173
Query: 513 IGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
             Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 223

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 370 IGTGGFGEVYKG-----------------VLPTRMRE-----FAAEIESLGRLRHKHLVN 407
           +G G FGEVY+G                  LP    E     F  E   + +  H+++V 
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFD-----NENFVLSWEQRFNIIKGIAAGLLYLH 462
             G   +     ++ + +  G L S L +     ++   L+     ++ + IA G  YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 463 EEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAP 518
           E      IHRD+ + N L+        A++GDFG+A+ ++           +  + ++ P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 519 ELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           E    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +D      
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEFVTSGGRMDPPKNCP 272
Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
           G  Y +            C   + E RP    +L
Sbjct: 273 GPVYRIMTQ---------CWQHQPEDRPNFAIIL 297

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 17  CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     + L           ++  L YL     + 
Sbjct: 77  IG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---KR 131
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 192 ASDVWMFGVCMWEI 205

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 14  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     + L           ++  L YL     + 
Sbjct: 74  IG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---KR 128
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 189 ASDVWMFGVCMWEI 202

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 17  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     + L           ++  L YL     + 
Sbjct: 77  IG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---KR 131
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 192 ASDVWMFGVCMWEI 205

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 385 TRMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDNENFVL 442
            +MREF    E L +L HK++V L    +    R  +L+ ++ P GSL ++L +  N   
Sbjct: 53  VQMREF----EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 443 SWEQRFNII-KGIAAGLLYLHEEWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARL 497
             E  F I+ + +  G+ +L E     ++HR++K GN++     D     +L DFG AR 
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165
Query: 498 FDHGKISHTTNVVGTIGYIAPELARTG--------KASCSTDVFAYGVLLLEIATGRRP 548
            +  +     ++ GT  Y+ P++            K   + D+++ GV     ATG  P
Sbjct: 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 20  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     + L           ++  L YL     + 
Sbjct: 80  IG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---KR 134
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 195 ASDVWMFGVCMWEI 208

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 22  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     + L           ++  L YL     + 
Sbjct: 82  IG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---KR 136
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 197 ASDVWMFGVCMWEI 210

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 369 VIGTGGFGEVYKGVLPT-------------------RMRE-FAAEIESLGRLRHKHLVNL 408
            IG G FG+V++G+  +                    +RE F  E  ++ +  H H+V L
Sbjct: 19  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G    +  + ++ +    G L S L     + L           ++  L YL     + 
Sbjct: 79  IG-VITENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES---KR 133
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + + 
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 529 STDVFAYGVLLLEI 542
           ++DV+ +GV + EI
Sbjct: 194 ASDVWMFGVCMWEI 207

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-------LRH 402
           T+ ++  E +G G F  V + V     +E+AA I           + L R       L+H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V L      +    L++D +  G L   +   E +  S     + I+ I   +L+ H
Sbjct: 70  PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYY--SEADASHCIQQILEAVLHCH 127
Query: 463 EEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           +     V+HR++K  N+L+ + +     +L DFGLA   + G+        GT GY++PE
Sbjct: 128 Q---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPE 183
Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
           + R        D++A GV+L  +  G  P  D D   L
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL 221

>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform) Length = 234

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 32/219 (14%)
Query: 68  HAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS-FPGG 126
           HA Y  P+ + D +T      N +SF T F F +          G+ F ++P  +  P  
Sbjct: 42  HALYATPVPIWDSATG-----NVASFITSFSFIVSNVQRYPPTDGVVFFLAPWGTEIPPN 96
Query: 127 KAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAY 186
               YLGI +S+N     N   A+EFD+     +    + +H+GI+VNS+ S+K      
Sbjct: 97  SQGGYLGITDSSNSQ---NQFVAVEFDSHPNVWDPKSLRSSHIGIDVNSIMSLK------ 147
Query: 187 YENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXX 246
                  ++   SG   +A I YD   +++ V +   N +                    
Sbjct: 148 -----AVNWNRVSGSLEKATIIYDSDTKILTVVMTHQNGQ-----------ITTISQEID 191
Query: 247 XXXAFQETMYVGFSAST-GRKVSSHFILGWSFSMNGAAP 284
                 E + VGFSA+T   +   H I  WSF+     P
Sbjct: 192 LKTVLPEKVSVGFSATTWNPERERHDIYSWSFTSTLKEP 230

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           L  L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L +V +++  G+L  ++       ++ EQ   +   +   L  LH    Q VIHRD+KS
Sbjct: 222 ELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKS 275
Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
            ++L+  D   +L DFG        ++     +VGT  ++APEL          D+++ G
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 334
Query: 537 VLLLEIATGRRP 548
           ++++E+  G  P
Sbjct: 335 IMVIEMVDGEPP 346

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           L  L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 391 AAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
             E   L   RH  L  L+   +    L  V +Y   G L         F LS E+ F  
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--------FFHLSRERVFTE 104
Query: 451 IKG------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKI 503
            +       I + L YLH    + V++RD+K  N+++D D + ++ DFGL +     G  
Sbjct: 105 ERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
             T    GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 162 MKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 44  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           L  L+   K   +L +V +Y P G + S L     F      RF   + I     YLH  
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 391 AAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
             E   L   RH  L  L+   +    L  V +Y   G L         F LS E+ F  
Sbjct: 56  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--------FFHLSRERVFTE 107
Query: 451 IKG------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKI 503
            +       I + L YLH    + V++RD+K  N+++D D + ++ DFGL +     G  
Sbjct: 108 ERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 164
Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
             T    GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 165 MKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 221

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L +V +++  G+L  ++       ++ EQ   +   +   L  LH    Q VIHRD+KS
Sbjct: 145 ELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKS 198
Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
            ++L+  D   +L DFG        ++     +VGT  ++APEL          D+++ G
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 257
Query: 537 VLLLEIATGRRP 548
           ++++E+  G  P
Sbjct: 258 IMVIEMVDGEPP 269

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L +V +++  G+L  ++       ++ EQ   +   +   L  LH    Q VIHRD+KS
Sbjct: 102 ELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKS 155
Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
            ++L+  D   +L DFG        ++     +VGT  ++APEL          D+++ G
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 214
Query: 537 VLLLEIATGRRP 548
           ++++E+  G  P
Sbjct: 215 IMVIEMVDGEPP 226

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L +V +++  G+L  ++       ++ EQ   +   +   L  LH    Q VIHRD+KS
Sbjct: 100 ELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKS 153
Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
            ++L+  D   +L DFG        ++     +VGT  ++APEL          D+++ G
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 212
Query: 537 VLLLEIATGRRP 548
           ++++E+  G  P
Sbjct: 213 IMVIEMVDGEPP 224

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 391 AAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
             E   L   RH  L  L+   +    L  V +Y   G L         F LS E+ F  
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--------FFHLSRERVFTE 104
Query: 451 IKG------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKI 503
            +       I + L YLH    + V++RD+K  N+++D D + ++ DFGL +     G  
Sbjct: 105 ERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
             T    GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 162 MKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F++ + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 43  FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 180
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 234
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L +V +++  G+L  ++       ++ EQ   +   +   L  LH    Q VIHRD+KS
Sbjct: 91  ELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKS 144
Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
            ++L+  D   +L DFG        ++     +VGT  ++APEL          D+++ G
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 203
Query: 537 VLLLEIATGRRP 548
           ++++E+  G  P
Sbjct: 204 IMVIEMVDGEPP 215

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS 476
           +L +V +++  G+L  ++       ++ EQ   +   +   L  LH    Q VIHRD+KS
Sbjct: 95  ELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKS 148
Query: 477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYG 536
            ++L+  D   +L DFG        ++     +VGT  ++APEL          D+++ G
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 207
Query: 537 VLLLEIATGRRP 548
           ++++E+  G  P
Sbjct: 208 IMVIEMVDGEPP 219

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 98  LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQ-IVLTFEYLHS- 154
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 155 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 208
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 241

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 37/238 (15%)
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL--------------------FDNEN- 439
           +H+++VNL G C     +L++ +Y   G L + L                     D E+ 
Sbjct: 93  QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 440 FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LF 498
             L      +    +A G+ +L     +  IHRDV + NVL+     A++GDFGLAR + 
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILV 557
           +        N    + ++APE       +  +DV++YG+LL EI + G  P      ILV
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG---ILV 266
Query: 558 DWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           +    ++ +     +  P      + + M+        C   +   RPT +Q+  +L 
Sbjct: 267 NSKF-YKLVKDGYQMAQPAFAPKNIYSIMQ-------ACWALEPTHRPTFQQICSFLQ 316

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 385 TRMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVYDYIPNGSLDSLLFDNENFVL 442
            +MREF    E L +L HK++V L    +    R  +L+ ++ P GSL ++L +  N   
Sbjct: 53  VQMREF----EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 443 SWEQRFNII-KGIAAGLLYLHEEWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARL 497
             E  F I+ + +  G+ +L E     ++HR++K GN++     D     +L DFG AR 
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165
Query: 498 FDHGKISHTTNVVGTIGYIAPELARTG--------KASCSTDVFAYGVLLLEIATGRRP 548
            +  +      + GT  Y+ P++            K   + D+++ GV     ATG  P
Sbjct: 166 LEDDE--QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 32/212 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI--------------ESLGR-------LRH 402
           ++  EVIG G F  V + +     ++FA +I              E L R       L+H
Sbjct: 28  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSL--DSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
            H+V L         L +V++++    L  + +   +  FV S     + ++ I   L Y
Sbjct: 88  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLA-RLFDHGKISHTTNVVGTIGYI 516
            H+     +IHRDVK   VL+ +  N+   +LG FG+A +L + G ++     VGT  ++
Sbjct: 148 CHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA--GGRVGTPHFM 202
Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           APE+ +        DV+  GV+L  + +G  P
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLP 234

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 391 AAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
             E   L   RH  L  L+   +    L  V +Y   G L         F LS E+ F  
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--------FFHLSRERVFTE 104
Query: 451 IKG------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR--LFDHGK 502
            +       I + L YLH    + V++RD+K  N+++D D + ++ DFGL +  + D   
Sbjct: 105 ERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
           +       GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 162 MK---XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 32/212 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEI--------------ESLGR-------LRH 402
           ++  EVIG G F  V + +     ++FA +I              E L R       L+H
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSL--DSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
            H+V L         L +V++++    L  + +   +  FV S     + ++ I   L Y
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLA-RLFDHGKISHTTNVVGTIGYI 516
            H+     +IHRDVK   VL+ +  N+   +LG FG+A +L + G ++     VGT  ++
Sbjct: 146 CHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA--GGRVGTPHFM 200
Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           APE+ +        DV+  GV+L  + +G  P
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLP 232

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 364 FKQSEVIGTGGFGEVY-------------------KGVLPTRMREFAAEIESLGRLRHKH 404
           F + + +GTG FG V                    K V   ++     E   L  +    
Sbjct: 30  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 90  LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 146
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 147 --LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 200
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 233

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 160
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 214
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLAGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 391 AAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
             E   L   RH  L  L+   +    L  V +Y   G L         F LS E+ F  
Sbjct: 58  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--------FFHLSRERVFTE 109
Query: 451 IKG------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS 504
            +       I + L YLH    + V++RD+K  N+++D D + ++ DFGL +    G   
Sbjct: 110 ERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISD 163
Query: 505 HTT--NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
             T     GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 223

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 391 AAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
             E   L   RH  L  L+   +    L  V +Y   G L         F LS E+ F  
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--------FFHLSRERVFTE 104
Query: 451 IKG------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS 504
            +       I + L YLH    + V++RD+K  N+++D D + ++ DFGL +    G   
Sbjct: 105 ERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISD 158
Query: 505 HTT--NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
             T     GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 391 AAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI 450
             E   L   RH  L  L+   +    L  V +Y   G L         F LS E+ F  
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--------FFHLSRERVFTE 104
Query: 451 IKG------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR--LFDHGK 502
            +       I + L YLH    + V++RD+K  N+++D D + ++ DFGL +  + D   
Sbjct: 105 ERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
           +       GT  Y+APE+        + D +  GV++ E+  GR P  + DH  L + +L
Sbjct: 162 MK---XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 180
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLAPEIILSK 234
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLXGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADEPIQI 246

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 114/275 (41%), Gaps = 47/275 (17%)
Query: 369 VIGTGGFGEVYKG-VLPTRMREFAAEIESLGRLRHKHLVNL---QGWCKRKRD----LLL 420
           VIG G FG VY G  +          I+SL R+     V     +G   R  +    L L
Sbjct: 28  VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 421 VYDYIPNGSLDSLLF------DNENFVLSWEQRFNIIKG-------IAAGLLYLHEEWEQ 467
           +   +P   L  +L       D   F+ S  QR   +K        +A G+ YL E   Q
Sbjct: 88  IGIMLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAE---Q 143
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLF---DHGKISHTTNVVGTIGYIAPELARTG 524
             +HRD+ + N ++D     ++ DFGLAR     ++  +    +    + + A E  +T 
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDS-DHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
           + +  +DV+++GVLL E+ T G  P    D F L  ++ + + L Q            Y 
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ----------PEYC 253
Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
              +  V+Q       Q  EA P +R   R L G+
Sbjct: 254 PDSLYQVMQ-------QCWEADPAVRPTFRVLVGE 281

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA------------EIESLGRL-RHKHLVN 407
           + G+   E IG G + E  + V      E+A             EIE L R  +H +++ 
Sbjct: 26  SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 408 LQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+      + + LV + +  G L D +L   + F    E  F ++  I   + YLH    
Sbjct: 86  LKDVYDDGKHVYLVTELMRGGELLDKIL--RQKFFSEREASF-VLHTIGKTVEYLHS--- 139
Query: 467 QVVIHRDVKSGNVL-IDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
           Q V+HRD+K  N+L +D   N    R+ DFG A+     +         T  ++APE+ +
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLK 198
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP 548
                   D+++ G+LL  +  G  P
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTP 224

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKR--DLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           R+F  E   L    H +++ + G C+        L+  ++P GSL ++L +  NFV+   
Sbjct: 52  RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQS 111
Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH 505
           Q       +A G+ +LH   E ++    + S +V+ID DM AR+    +   F       
Sbjct: 112 QAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF------Q 164
Query: 506 TTNVVGTIGYIAPELARTGKASC---STDVFAYGVLLLEIATGRRP 548
           +   +    ++APE  +         S D++++ VLL E+ T   P
Sbjct: 165 SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 46/222 (20%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVL---------------PTRMREFAAEIESLGRLRHK 403
           T  K  +  + IG G +GEV+ G                  +  RE   EI     +RH+
Sbjct: 34  TIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHE 91
Query: 404 HLV-----NLQG---WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
           +++     +++G   W +    L L+ DY  NGSL   L   ++  L  +    +     
Sbjct: 92  NILGFIAADIKGTGSWTQ----LYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSV 144
Query: 456 AGLLYLHEEW-----EQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTN 508
           +GL +LH E      +  + HRD+KS N+L+  +    + D GLA  F  D  ++    N
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 509 V-VGTIGYIAPELARTG------KASCSTDVFAYGVLLLEIA 543
             VGT  Y+ PE+          ++    D++++G++L E+A
Sbjct: 205 TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246

>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 37/264 (14%)
Query: 22  QQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN----VIGHAFYNKPIQM 77
           Q    F F  F   + N  LI +  A I   +  L  TD+  N     +G   ++  + +
Sbjct: 1   QDSLSFGFPTFPSDQKN--LIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHL 58
Query: 78  LDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP-QPSFPGGKAEHYLGILN 136
            +KS+S       ++F + F F + +P S  G  G+AF ++P   + P G     LG+  
Sbjct: 59  WEKSSS-----RVANFQSQFSFSLKSPLSN-GADGIAFFIAPPDTTIPSGSGGGLLGLFA 112
Query: 137 -STNDHKPSNHLFAIEFDTVNGYNE-TSDSQGNHVGINVNSMKSIKLEPAAYYENGTKED 194
             T  +  +N + A+EFDT    +  T D    H+GI+VNS++S+K              
Sbjct: 113 PGTAQNTSANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVK-------------- 158
Query: 195 FTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQET 254
                      W   DG +  V VT  P  +   +   +                   E 
Sbjct: 159 --------TVKWDRRDGQSLNVLVTFNPSTRNLDVVATYSDGTRYEVSYEVDVRSVLPEW 210
Query: 255 MYVGFSASTGRKVSSHFILGWSFS 278
           + VGFSA++G +  +H +  WSF+
Sbjct: 211 VRVGFSAASGEQYQTHTLESWSFT 234

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 91  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 147
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 203
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 204 CDMWSLGVIMYILLCGYPPFYSNH 227

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 92  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 148
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 204
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 205 CDMWSLGVIMYILLCGYPPFYSNH 228

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 93  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 149
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 205
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 206 CDMWSLGVIMYILLCGYPPFYSNH 229

>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 39  QGLITRERASILKPSGALRLTDNAHN----VIGHAFYNKPIQMLDKSTSLSSKPNASSFS 94
           + LI +  A I   +  L  TD+  N     +G   ++  + + +KS+S       ++F 
Sbjct: 16  KNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKSSS-----RVANFQ 70
Query: 95  TCFVFQIVTPNSGQGGFGLAFTVSP-QPSFPGGKAEHYLGILN-STNDHKPSNHLFAIEF 152
           + F F + +P S  G  G+AF ++P   + P G     LG+    T  +  +N + A+EF
Sbjct: 71  SQFSFSLKSPLSN-GADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEF 129
Query: 153 DTVNGYNE-TSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDG 211
           DT    +  T D    H+GI+VNS++S+K                         W   DG
Sbjct: 130 DTFYAQDSNTWDPNYPHIGIDVNSIRSVK----------------------TVKWDRRDG 167
Query: 212 VNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMYVGFSASTGRKVSSHF 271
            +  V VT  P  +   +   +                   E + VGFSA++G +  +H 
Sbjct: 168 QSLNVLVTFNPSTRNLDVVATYSDGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHT 227
Query: 272 ILGWSFS 278
           +  WSF+
Sbjct: 228 LESWSFT 234

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 159 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 211
Query: 510 VGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGR 546
           V T  Y APE+       + + D+++ G ++ E+ TGR
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 101 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 157
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 213
Query: 530 TDVFAYGVLLLEIATGRRPIDSDHFILV 557
            D+++ GV++  +  G  P  S+H + +
Sbjct: 214 CDMWSLGVIMYILLCGYPPFYSNHGLAI 241

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 27/176 (15%)
Query: 393 EIESLGRLRHKHLVNLQG--WCKRKRDLLLVYDYIPNGS---LDSLLFDNENFVLSWEQR 447
           EI+ L RLRHK+++ L    + + K+ + +V +Y   G    LDS+           E+R
Sbjct: 56  EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP----------EKR 105
Query: 448 FNIIKG------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG 501
           F + +       +  GL YLH    Q ++H+D+K GN+L+      ++   G+A      
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 502 KISHTTNVV-GTIGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDHF 554
               T     G+  +  PE+A      +    D+++ GV L  I TG  P + D+ 
Sbjct: 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI 218

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA------------EIESLGRL-RHKHLVN 407
           + G+   E IG G + E  + V      E+A             EIE L R  +H +++ 
Sbjct: 26  SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIIT 85
Query: 408 LQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L+      + + LV + +  G L D +L   + F    E  F ++  I   + YLH    
Sbjct: 86  LKDVYDDGKHVYLVTELMRGGELLDKIL--RQKFFSEREASF-VLHTIGKTVEYLHS--- 139
Query: 467 QVVIHRDVKSGNVL-IDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
           Q V+HRD+K  N+L +D   N    R+ DFG A+     +         T  ++APE+ +
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLK 198
Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP 548
                   D+++ G+LL  +  G  P
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTP 224

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N++ID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIIISK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 86  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 142
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 198
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 199 CDMWSLGVIMYILLCGYPPFYSNH 222

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 87  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 143
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYSNH 223

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ ++A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPPFFADQPIQI 246

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 85  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 141
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 197
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 198 CDMWSLGVIMYILLCGYPPFYSNH 221

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 85  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 141
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKS 197
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 198 CDMWSLGVIMYILLCGYPPFYSNH 221

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 87  RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 143
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYSNH 223

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 187
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 243
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 244 CDMWSLGVIMYILLCGYPPFYSNH 267

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + HRDV
Sbjct: 137 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV 193
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 194 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 249
Query: 530 TDVFAYGVLLLEIATGRRPIDSDH 553
            D+++ GV++  +  G  P  S+H
Sbjct: 250 CDMWSLGVIMYILLCGYPPFYSNH 273

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 135 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGY 187
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 136 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 188
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 132 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 184
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 137 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 189
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 135 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGY 187
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 135 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 187
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 129 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 181
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 132 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 184
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 136 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 188
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 141 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGY 193
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 132 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 184
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 91/229 (39%), Gaps = 36/229 (15%)
Query: 353 RYSDLYTATKGFKQSEVIGTGGFGEVYKGVLP---------------------TRMREFA 391
           +  D+    + F    ++G G FG V +  L                      + + EF 
Sbjct: 14  KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 392 AEIESLGRLRHKHLVNLQGWCKRKRDL------LLVYDYIPNGSLDSLLFDN---EN-FV 441
            E   +    H H+  L G   R R        +++  ++ +G L + L  +   EN F 
Sbjct: 74  REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG 501
           L  +     +  IA G+ YL     +  IHRD+ + N ++  DM   + DFGL+R    G
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 502 KISHTTNVVG-TIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
                       + ++A E       +  +DV+A+GV + EI T G+ P
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 140 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 192
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 136 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 188
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGX 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 142 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 194
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 135 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 187
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 141 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 193
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 142 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 194
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 142 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 194
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVGT 512
           I   L YL E+    VIHRDVK  N+L+D     +L DFG++ RL D      +    G 
Sbjct: 133 IVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS---AGC 187
Query: 513 IGYIAPELARTGKAS-----CSTDVFAYGVLLLEIATGRRP 548
             Y+APE       +        DV++ G+ L+E+ATG+ P
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 127 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 179
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 149 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 201
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 150 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 202
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 126 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 178
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 153 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 205
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 127 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 179
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 149 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 201
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 27/197 (13%)
Query: 370 IGTGGFGEVYKGV---------LPTRMREFAAEIES---------LGRLRHKHLVNLQGW 411
           +G+G +G V   +         +    R F +EI +         L  ++H++++ L   
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 412 CKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
                 L   YD Y+    + + L        S E+   ++  +  GL Y+H      V+
Sbjct: 92  FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VV 148
Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           HRD+K GN+ ++ D   ++ DFGLAR  D    +  T  V T  Y APE+  +      T
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRAPEVILSWMHYNQT 204
Query: 531 -DVFAYGVLLLEIATGR 546
            D+++ G ++ E+ TG+
Sbjct: 205 VDIWSVGCIMAEMLTGK 221

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 150 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 202
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 126 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 178
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT  Y+AP +  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPAIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 128 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 180
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 136 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD----DEMTGY 188
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 132 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD----DEMTGY 184
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D       T  
Sbjct: 126 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGY 178
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 50  GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
Query: 421 VYDYIPNGSLDSLLFDNEN-FV---------LSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
           + ++   G+L + L    N FV         L+ E        +A G+ +L     +  I
Sbjct: 110 IVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLAS---RKXI 166
Query: 471 HRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           HRD+ + N+L+      ++ DFGLAR ++         +    + ++APE       +  
Sbjct: 167 HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 530 TDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVVAEME 587
           +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y   EM 
Sbjct: 227 SDVWSFGVLLWEIFSLGASPYPG---VKID--EEFXRRLKEGTRMRAPD----YTTPEM- 276
Query: 588 LVLQLGLLCSHQKAEARPTMRQVLRYL 614
              Q  L C H +   RPT  +++ +L
Sbjct: 277 --YQTMLDCWHGEPSQRPTFSELVEHL 301

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA------------EIESLGRL-RHKHLVN 407
           T G++  E IG G +    + +      EFA             EIE L R  +H +++ 
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L+      + + +V + +  G L   +   + F  S  +   ++  I   + YLH    Q
Sbjct: 81  LKDVYDDGKYVYVVTELMKGGELLDKILRQKFF--SEREASAVLFTITKTVEYLHA---Q 135
Query: 468 VVIHRDVKSGNVL-IDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
            V+HRD+K  N+L +D   N    R+ DFG A+     +         T  ++APE+   
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTPCYTANFVAPEVLER 194
Query: 524 GKASCSTDVFAYGVLLLEIATGRRP 548
                + D+++ GVLL  + TG  P
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTP 219

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           ++  +  GL Y+H      V+HRD+K GN+ ++ D   ++ DFGLAR  D    +  T  
Sbjct: 149 LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGY 201
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+  +      T D+++ G ++ E+ TG+
Sbjct: 202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 393 EIESLGRLRHKHLVNLQG--WCKRKRDLLLVYDYIPNGSLDSLLF------DNENFVLSW 444
           EI  L  L+H ++++LQ        R + L++DY  +     + F      + +   L  
Sbjct: 68  EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR----LGDFGLARLFDH 500
               +++  I  G+ YLH  W   V+HRD+K  N+L+  +   R    + D G ARLF+ 
Sbjct: 128 GMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 501 --GKISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIAT 544
               ++    VV T  Y APEL    +  + + D++A G +  E+ T
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 52  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
Query: 421 VYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKG-------------IAAGLLYLHEEWE 466
           + ++   G+L + L    N FV   E   ++ K              +A G+ +L     
Sbjct: 112 IVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 168
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  IHRD+ + N+L+      ++ DFGLAR ++         +    + ++APE      
Sbjct: 169 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 228
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVV 583
            +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y  
Sbjct: 229 YTIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTT 279
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            EM    Q  L C H +   RPT  +++ +L
Sbjct: 280 PEM---YQTMLDCWHGEPSQRPTFSELVEHL 307

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 50  GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
Query: 421 VYDYIPNGSLDSLLFDNEN-FV---------LSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
           + ++   G+L + L    N FV         L+ E        +A G+ +L     +  I
Sbjct: 110 IVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKXI 166
Query: 471 HRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           HRD+ + N+L+      ++ DFGLAR ++         +    + ++APE       +  
Sbjct: 167 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 530 TDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVVAEME 587
           +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y   EM 
Sbjct: 227 SDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTTPEM- 276
Query: 588 LVLQLGLLCSHQKAEARPTMRQVLRYL 614
              Q  L C H +   RPT  +++ +L
Sbjct: 277 --YQTMLDCWHGEPSQRPTFSELVEHL 301

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ D+GLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 33/270 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 51  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 110
Query: 421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG-------------IAAGLLYLHEEWEQ 467
           + ++   G+L + L    N  + ++   ++ K              +A G+ +L     +
Sbjct: 111 IVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---R 167
Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKA 526
             IHRD+ + N+L+      ++ DFGLAR +          +    + ++APE       
Sbjct: 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
Query: 527 SCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVVA 584
           +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y   
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTTP 278
Query: 585 EMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           EM    Q  L C H +   RPT  +++ +L
Sbjct: 279 EM---YQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F      RF   + I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLHS- 159
Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT   +APE+  + 
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEALAPEIILSK 213
Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
             + + D +A GVL+ E+A G  P  +D  I +
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase Length = 223

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 98/260 (37%), Gaps = 72/260 (27%)
Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSS 86
           FI + FN+T     LI +  A++   +G L+L+ N+++ +  AFY+ PIQ+ D +T    
Sbjct: 6   FIIDAFNKT----NLILQGDATV-SSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTG--- 57
Query: 87  KPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP-QPSFPGGKAEHYLGILNSTNDHKPSN 145
             N +SF T F   I T        GL F + P QP   G                    
Sbjct: 58  --NVASFDTNFTMNIRTHRQANSAVGLDFVLVPVQPESKGDTV----------------- 98
Query: 146 HLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQA 205
               +EFDT            + + I+VN+   IK  P   +                  
Sbjct: 99  ---TVEFDTF----------LSRISIDVNN-NDIKSVPWDVH------------------ 126
Query: 206 WIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMY----VGFSA 261
             DYDG N  V +T     K   +S                     ++ +Y    VGFSA
Sbjct: 127 --DYDGQNAEVRITYNSSTKVFSVSL---SNPSTGKSNNVSTTVELEKEVYDWVSVGFSA 181
Query: 262 STGR---KVSSHFILGWSFS 278
           ++G       +H +L WSFS
Sbjct: 182 TSGAYQWSYETHDVLSWSFS 201

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           ++  +  GL Y+H      +IHRD+K GN+ ++ D   ++ DFGLAR  D    S     
Sbjct: 133 LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQAD----SEMXGX 185
Query: 510 VGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGR 546
           V T  Y APE+     + + + D+++ G ++ E+ TG+
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR          T  
Sbjct: 137 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGY 189
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR          T  
Sbjct: 137 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGY 189
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR          T  
Sbjct: 137 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGY 189
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 34/271 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 50  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
Query: 421 VYDYIPNGSLDSLLFDNEN-FV-------------LSWEQRFNIIKGIAAGLLYLHEEWE 466
           + ++   G+L + L    N FV             L+ E        +A G+ +L     
Sbjct: 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 166
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  IHRD+ + N+L+      ++ DFGLAR ++         +    + ++APE      
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVV 583
            +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y  
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTT 277
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            EM    Q  L C H +   RPT  +++ +L
Sbjct: 278 PEM---YQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D          
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMAGF 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 34/271 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 41  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
Query: 421 VYDYIPNGSLDSLLFDNEN-FV-------------LSWEQRFNIIKGIAAGLLYLHEEWE 466
           + ++   G+L + L    N FV             L+ E        +A G+ +L     
Sbjct: 101 ITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 157
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  IHRD+ + N+L+      ++ DFGLAR ++         +    + ++APE      
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 217
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVV 583
            +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y  
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTT 268
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            EM    Q  L C H +   RPT  +++ +L
Sbjct: 269 PEM---YQTMLDCWHGEPSQRPTFSELVEHL 296

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D          
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMAGF 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 34/271 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 50  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
Query: 421 VYDYIPNGSLDSLLFDNEN-FV-------------LSWEQRFNIIKGIAAGLLYLHEEWE 466
           + ++   G+L + L    N FV             L+ E        +A G+ +L     
Sbjct: 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 166
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  IHRD+ + N+L+      ++ DFGLAR ++         +    + ++APE      
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 226
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVV 583
            +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y  
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTT 277
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            EM    Q  L C H +   RPT  +++ +L
Sbjct: 278 PEM---YQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGL R  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 34/271 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 41  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
Query: 421 VYDYIPNGSLDSLLFDNEN-FV-------------LSWEQRFNIIKGIAAGLLYLHEEWE 466
           + ++   G+L + L    N FV             L+ E        +A G+ +L     
Sbjct: 101 ITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 157
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  IHRD+ + N+L+      ++ DFGLAR ++         +    + ++APE      
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 217
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVV 583
            +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y  
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTT 268
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            EM    Q  L C H +   RPT  +++ +L
Sbjct: 269 PEM---YQTMLDCWHGEPSQRPTFSELVEHL 296

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D          
Sbjct: 153 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMXGY 205
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243

>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Length = 205

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 99/263 (37%), Gaps = 72/263 (27%)
Query: 24  KEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTS 83
           +  FI + FN+T     LI +  A++   +G L+L+ N+++ +  AFY+ PIQ+ D +T 
Sbjct: 3   ETSFIIDAFNKTN----LILQGDATV-SSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTG 57
Query: 84  LSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSP-QPSFPGGKAEHYLGILNSTNDHK 142
                N +SF T F   I T        GL F + P QP   G                 
Sbjct: 58  -----NVASFDTNFTMNIRTHRQANSAVGLDFVLVPVQPESKGDTV-------------- 98
Query: 143 PSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDP 202
                  +EFDT            + + I+VN+   IK  P   +               
Sbjct: 99  ------TVEFDTF----------LSRISIDVNN-NDIKSVPWDVH--------------- 126
Query: 203 VQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKXXXXXXXXXXXXXXAFQETMY----VG 258
                DYDG N  V +T     K   +S                     ++ +Y    VG
Sbjct: 127 -----DYDGQNAEVRITYNSSTKVFSVSL---SNPSTGKSNNVSTTVELEKEVYDWVSVG 178
Query: 259 FSASTGR---KVSSHFILGWSFS 278
           FSA++G       +H +L WSFS
Sbjct: 179 FSATSGAYQWSYETHDVLSWSFS 201

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D          
Sbjct: 126 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMAGF 178
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           ++  +  GL Y+H      +IHRD+K  NV ++ D   R+ DFGLAR  D       T  
Sbjct: 128 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQAD----EEMTGY 180
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+  G+
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR  D          
Sbjct: 150 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMXGX 202
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 34/271 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 87  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146
Query: 421 VYDYIPNGSLDSLLFDNEN-FV-------------LSWEQRFNIIKGIAAGLLYLHEEWE 466
           + ++   G+L + L    N FV             L+ E        +A G+ +L     
Sbjct: 147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 203
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  IHRD+ + N+L+      ++ DFGLAR ++         +    + ++APE      
Sbjct: 204 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 263
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVV 583
            +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y  
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTT 314
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            EM    Q  L C H +   RPT  +++ +L
Sbjct: 315 PEM---YQTMLDCWHGEPSQRPTFSELVEHL 342

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 21/195 (10%)
Query: 370 IGTGGFGEVYK----------GVLPTRMREF-AAEIESLGRLRHKHLVNLQGWCKRKRDL 418
           +G G FGEV++           V   R+  F A E+ +   L    +V L G  +    +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWV 160
Query: 419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN 478
            +  + +  GSL  L+   E   L  ++    +     GL YLH    + ++H DVK+ N
Sbjct: 161 NIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADN 215
Query: 479 VLIDAD-MNARLGDFGLARLFDH---GKISHTTNVV-GTIGYIAPELARTGKASCSTDVF 533
           VL+ +D  +A L DFG A        GK   T + + GT  ++APE+          DV+
Sbjct: 216 VLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 275
Query: 534 AYGVLLLEIATGRRP 548
           +   ++L +  G  P
Sbjct: 276 SSCCMMLHMLNGCHP 290

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           ++ LL+V + +  G L S + D  +   +  +   I K I   + YLH      + HRDV
Sbjct: 131 RKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS---INIAHRDV 187
Query: 475 KSGNVLIDADM-NA--RLGDFGLARLFDHGKISHT--TNVVGTIGYIAPELARTGKASCS 529
           K  N+L  +   NA  +L DFG A+       SH   T    T  Y+APE+    K   S
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 243
Query: 530 TDVFAYGVLLLEIATGRRPIDSDHFILV 557
            D ++ GV+   +  G  P  S+H + +
Sbjct: 244 CDXWSLGVIXYILLCGYPPFYSNHGLAI 271

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 11  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 71  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 130 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 183
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 125 HCH---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 178
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 39  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 99  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 211
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 21/195 (10%)
Query: 370 IGTGGFGEVYK----------GVLPTRMREF-AAEIESLGRLRHKHLVNLQGWCKRKRDL 418
           +G G FGEV++           V   R+  F A E+ +   L    +V L G  +    +
Sbjct: 82  LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWV 141
Query: 419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGN 478
            +  + +  GSL  L+   E   L  ++    +     GL YLH    + ++H DVK+ N
Sbjct: 142 NIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADN 196
Query: 479 VLIDAD-MNARLGDFGLARLFDH---GKISHTTNVV-GTIGYIAPELARTGKASCSTDVF 533
           VL+ +D  +A L DFG A        GK   T + + GT  ++APE+          DV+
Sbjct: 197 VLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 256
Query: 534 AYGVLLLEIATGRRP 548
           +   ++L +  G  P
Sbjct: 257 SSCCMMLHMLNGCHP 271

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 26  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 86  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 145 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 198
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           ++  +  GL Y+H      +IHRD+K  NV ++ D   R+ DFGLAR  D       T  
Sbjct: 136 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTGY 188
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+  G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 40/236 (16%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 53  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 172 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 225
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVL-------EFQHL 566
           E  R  +    S  V++ G+LL ++  G  P + D  I+   V        E QHL
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 281

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           ++  +  GL Y+H      +IHRD+K  NV ++ D   R+ DFGLAR  D       T  
Sbjct: 136 LVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTGY 188
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+  G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 39  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 99  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 211
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 40/236 (16%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 45  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 104
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 105 SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 164 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 217
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVL-------EFQHL 566
           E  R  +    S  V++ G+LL ++  G  P + D  I+   V        E QHL
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 273

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 25  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 85  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 144 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 197
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 23/205 (11%)
Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA------------EIESLGRL-RHKHLVN 407
           T G++  E IG G +    + +      EFA             EIE L R  +H +++ 
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L+      + + +V +    G L   +   + F  S  +   ++  I   + YLH    Q
Sbjct: 81  LKDVYDDGKYVYVVTELXKGGELLDKILRQKFF--SEREASAVLFTITKTVEYLHA---Q 135
Query: 468 VVIHRDVKSGNVL-IDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
            V+HRD+K  N+L +D   N    R+ DFG A+     +         T  ++APE+   
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLXTPCYTANFVAPEVLER 194
Query: 524 GKASCSTDVFAYGVLLLEIATGRRP 548
                + D+++ GVLL    TG  P
Sbjct: 195 QGYDAACDIWSLGVLLYTXLTGYTP 219

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 11  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 71  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 130 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 183
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 38  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 98  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 210
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 10  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 70  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 129 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 182
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 221

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 39  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 99  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 211
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 38  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 98  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 210
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 25  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 85  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 144 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 197
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 11  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 71  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 130 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 183
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 38  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 98  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 210
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 26  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 86  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 145 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 198
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 39  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 99  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 211
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 26  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 86  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 145 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 198
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 38  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 98  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 210
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 53  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 172 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 225
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 28/137 (20%)
Query: 437 NENFVLSWEQR-FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA------------ 483
           +EN  L  E    ++++ IA+G+ +LH      +IHRD+K  N+L+              
Sbjct: 106 DENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGA 162
Query: 484 -DMNARLGDFGLARLFDHGKISHTTNV---VGTIGYIAPELARTG-------KASCSTDV 532
            ++   + DFGL +  D G+ S  TN+    GT G+ APEL           + + S D+
Sbjct: 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222
Query: 533 FAYGVLLLEI-ATGRRP 548
           F+ G +   I + G+ P
Sbjct: 223 FSMGCVFYYILSKGKHP 239

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 33  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 93  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 152 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 205
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 244

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGR 399
           T+   +++   +G G +GEVYK +  T   E  A                   E+  L  
Sbjct: 31  TSIDRYRRITKLGEGTYGEVYKAI-DTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
           L+H++++ L+        L L+++Y  N   D   + ++N  +S     + +  +  G+ 
Sbjct: 90  LQHRNIIELKSVIHHNHRLHLIFEYAEN---DLKKYMDKNPDVSMRVIKSFLYQLINGVN 146
Query: 460 YLHEEWEQVVIHRDVKSGNVLI---DADMNA--RLGDFGLARLFDHGKISHTTNVVGTIG 514
           + H    +  +HRD+K  N+L+   DA      ++GDFGLAR F    I   T+ + T+ 
Sbjct: 147 FCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG-IPIRQFTHEIITLW 202
Query: 515 YIAPE-LARTGKASCSTDVFAYGVLLLEI 542
           Y  PE L  +   S S D+++   +  E+
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEM 231

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 125 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 178
Query: 519 ELARTGKASC-STDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 40/236 (16%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 58  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 117
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 118 SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 177 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 230
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVL-------EFQHL 566
           E  R  +    S  V++ G+LL ++  G  P + D  I+   V        E QHL
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 286

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 28/220 (12%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-------L 400
           + T  ++  E +G G F  V + +     +E+AA+I           + L R       L
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +H ++V L      +    LV+D +  G L   +   E +  S     + I+ I   + +
Sbjct: 61  KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY--SEADASHCIQQILESVNH 118
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            H      ++HRD+K  N+L+ +       +L DFGLA +   G         GT GY++
Sbjct: 119 CHL---NGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
           PE+ R        D++A GV+L  +  G  P  D D   L
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRL 214

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++  FGLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DF LAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 125 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 178
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 9   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ +  P    D   F  E   L  E   +    +   + 
Sbjct: 69  SGFSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 128 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 181
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 220

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ D GLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 28/220 (12%)
Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAAEI-----------ESLGR-------L 400
           + T  ++  E +G G F  V + +     +E+AA+I           + L R       L
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +H ++V L      +    LV+D +  G L   +   E +  S     + I+ I   + +
Sbjct: 61  KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY--SEADASHCIQQILESVNH 118
Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            H      ++HRD+K  N+L+ +       +L DFGLA +   G         GT GY++
Sbjct: 119 CHL---NGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPI-DSDHFIL 556
           PE+ R        D++A GV+L  +  G  P  D D   L
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRL 214

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 52/231 (22%)
Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLR- 401
           + ++  + +G G +G V+K +   R  E  A                   EI  L  L  
Sbjct: 9   RKYELVKKLGKGAYGIVWKSI-DRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 402 HKHLVNLQGWCK--RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
           H+++VNL    +    RD+ LV+DY+    L +++  N   +L    +  ++  +   + 
Sbjct: 68  HENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRAN---ILEPVHKQYVVYQLIKVIK 123
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHT------------ 506
           YLH      ++HRD+K  N+L++A+ + ++ DFGL+R F +  ++++             
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 507 -------TNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGRRPI 549
                  T+ V T  Y APE L  + K +   D+++ G +L EI  G +PI
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH 505
           Q +  ++     L +LH    Q ++H DVK  N+ +      +LGDFGL  L + G    
Sbjct: 158 QVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGA 212
Query: 506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT 544
                G   Y+APEL + G    + DVF+ G+ +LE+A 
Sbjct: 213 GEVQEGDPRYMAPELLQ-GSYGTAADVFSLGLTILEVAC 250

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ D GLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 32/269 (11%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 52  GIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
Query: 421 VYDYIPNGSLDSLLFDNEN-FV-----------LSWEQRFNIIKGIAAGLLYLHEEWEQV 468
           + ++   G+L + L    N FV           L+ E        +A G+ +L     + 
Sbjct: 112 IVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLAS---RK 168
Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
            IHRD+ + N+L+      ++ DFGLAR +          +    + ++APE       +
Sbjct: 169 XIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 528 CSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVVAE 585
             +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y   E
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTTPE 279
Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           M    Q  L C H +   RPT  +++ +L
Sbjct: 280 M---YQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT 507
            +I   IA  + +LH    + ++HRD+K  N+    D   ++GDFGL    D  +   T 
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 508 -----------NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
                        VGT  Y++PE       S   D+F+ G++L E+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 386 RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           ++ +   EI  L R+ H +++ +    + +    LV +   +G LD   F + +  L   
Sbjct: 72  KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEP 130
Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH 505
               I + + + + YL     + +IHRD+K  N++I  D   +L DFG A   + GK+ +
Sbjct: 131 LASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY 187
Query: 506 TTNVVGTIGYIAPEL 520
           T    GTI Y APE+
Sbjct: 188 T--FCGTIEYCAPEV 200

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EIE L +L H  ++ ++ +   + D  +V + +  G L   +  N+    +  + +    
Sbjct: 71  EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLY--FY 127
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNV 509
            +   + YLHE     +IHRD+K  NVL+   + D   ++ DFG +++   G+ S    +
Sbjct: 128 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 182
Query: 510 VGTIGYIAPE-LARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSDH 553
            GT  Y+APE L   G A  + + D ++ GV+L    +G  P  S+H
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEH 228

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 50  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
Query: 421 VYDYIPNGSLDSLLFDNEN-FV-------------LSWEQRFNIIKGIAAGLLYLHEEWE 466
           + ++   G+L + L    N FV             L+ E        +A G+ +L     
Sbjct: 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 166
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  IHRD+ + N+L+      ++ DFGLAR +          +    + ++APE      
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVV 583
            +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y  
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTT 277
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            EM    Q  L C H +   RPT  +++ +L
Sbjct: 278 PEM---YQTMLDCWHGEPSQRPTFSELVEHL 305

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EIE L +L H  ++ ++ +   + D  +V + +  G L   +  N+    +  + +    
Sbjct: 65  EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLY--FY 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNV 509
            +   + YLHE     +IHRD+K  NVL+   + D   ++ DFG +++   G+ S    +
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 176
Query: 510 VGTIGYIAPE-LARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSDH 553
            GT  Y+APE L   G A  + + D ++ GV+L    +G  P  S+H
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEH 222

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT---TNVVGTI 513
           GL Y+H      VIHRD+K  N+L++ +   ++GDFG+AR        H    T  V T 
Sbjct: 171 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 514 GYIAPELART-GKASCSTDVFAYGVLLLEIATGRR 547
            Y APEL  +  + + + D+++ G +  E+   R+
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EIE L +L H  ++ ++ +   + D  +V + +  G L   +  N+    +  + +    
Sbjct: 64  EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLY--FY 120
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNV 509
            +   + YLHE     +IHRD+K  NVL+   + D   ++ DFG +++   G+ S    +
Sbjct: 121 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 175
Query: 510 VGTIGYIAPE-LARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSDH 553
            GT  Y+APE L   G A  + + D ++ GV+L    +G  P  S+H
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEH 221

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 41  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
Query: 421 VYDYIPNGSLDSLLFDNEN-FV-------------LSWEQRFNIIKGIAAGLLYLHEEWE 466
           + ++   G+L + L    N FV             L+ E        +A G+ +L     
Sbjct: 101 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 157
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  IHRD+ + N+L+      ++ DFGLAR +          +    + ++APE      
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVV 583
            +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y  
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTT 268
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            EM    Q  L C H +   RPT  +++ +L
Sbjct: 269 PEM---YQTMLDCWHGEPSQRPTFSELVEHL 296

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EIE L +L H  ++ ++ +   + D  +V + +  G L   +  N+    +  + +    
Sbjct: 65  EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLY--FY 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNV 509
            +   + YLHE     +IHRD+K  NVL+   + D   ++ DFG +++   G+ S    +
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 176
Query: 510 VGTIGYIAPE-LARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSDH 553
            GT  Y+APE L   G A  + + D ++ GV+L    +G  P  S+H
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEH 222

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
           EIE L +L H  ++ ++ +   + D  +V + +  G L   +  N+    +  + +    
Sbjct: 65  EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLY--FY 121
Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNV 509
            +   + YLHE     +IHRD+K  NVL+   + D   ++ DFG +++   G+ S    +
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTL 176
Query: 510 VGTIGYIAPE-LARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSDH 553
            GT  Y+APE L   G A  + + D ++ GV+L    +G  P  S+H
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEH 222

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRL-RHKHLVNLQGWC-KRKRDLLL 420
           G  ++    T     + +G   +  R   +E++ L  +  H ++VNL G C K    L++
Sbjct: 41  GIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
Query: 421 VYDYIPNGSLDSLLFDNEN-FV-------------LSWEQRFNIIKGIAAGLLYLHEEWE 466
           + ++   G+L + L    N FV             L+ E        +A G+ +L     
Sbjct: 101 ITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 157
Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGTIGYIAPELARTGK 525
           +  IHRD+ + N+L+      ++ DFGLAR +          +    + ++APE      
Sbjct: 158 RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 526 ASCSTDVFAYGVLLLEI-ATGRRPIDSDHFILVDWVLEF-QHLGQVLDVVDPNLGSSYVV 583
            +  +DV+++GVLL EI + G  P      + +D   EF + L +   +  P+    Y  
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPG---VKID--EEFCRRLKEGTRMRAPD----YTT 268
Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            EM    Q  L C H +   RPT  +++ +L
Sbjct: 269 PEM---YQTMLDCWHGEPSQRPTFSELVEHL 296

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVLP---------------TRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  +L                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK+++ L      ++ L    D YI    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATG 545
           E+        + D+++ GV++ E+  G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVLP---------------TRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  +L                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK+++ L      ++ L    D YI    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATG 545
           E+        + D+++ GV++ E+  G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           KR LL++ + +  G L S + +  +   +  +   I++ I   + +LH      + HRDV
Sbjct: 98  KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDV 154
Query: 475 KSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTD 531
           K  N+L    + D   +L DFG A+      +        T  Y+APE+    K   S D
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ---TPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 532 VFAYGVLLLEIATGRRPIDSD 552
           +++ GV++  +  G  P  S+
Sbjct: 212 MWSLGVIMYILLCGFPPFYSN 232

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD--MNARLGDFGLARLF---DHGKI 503
           NI++ I + L YLH    Q + HRD+K  N L   +     +L DFGL++ F   ++G+ 
Sbjct: 172 NIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 504 SHTTNVVGTIGYIAPELARTGKASC--STDVFAYGVLLLEIATGRRP 548
              T   GT  ++APE+  T   S     D ++ GVLL  +  G  P
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 392 AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII 451
            EIE L +L H  ++ ++ +   + D  +V + +  G L   +  N+    +  + +   
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLY--F 259
Query: 452 KGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTN 508
             +   + YLHE     +IHRD+K  NVL+   + D   ++ DFG +++   G+ S    
Sbjct: 260 YQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT 314
Query: 509 VVGTIGYIAPE-LARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSDH 553
           + GT  Y+APE L   G A  + + D ++ GV+L    +G  P  S+H
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEH 361

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
           +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ D GLAR  D       T  
Sbjct: 130 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTD----DEMTGY 182
Query: 510 VGTIGYIAPELARTGKASCST-DVFAYGVLLLEIATGR 546
           V T  Y APE+         T D+++ G ++ E+ TGR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 392 AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII 451
            EIE L +L H  ++ ++ +   + D  +V + +  G L   +  N+    +  + +   
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLY--F 245
Query: 452 KGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTN 508
             +   + YLHE     +IHRD+K  NVL+   + D   ++ DFG +++   G+ S    
Sbjct: 246 YQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRT 300
Query: 509 VVGTIGYIAPE-LARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSDH 553
           + GT  Y+APE L   G A  + + D ++ GV+L    +G  P  S+H
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEH 347

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 29/201 (14%)
Query: 370 IGTGGFG-------EVYKGVLPTRMREFAAEI-ESLGR-------LRHKHLVNLQGWCKR 414
           IG+G FG       ++ K ++  +  E  A I E++ R       LRH ++V  +     
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
              L ++ +Y   G L   + +   F    E RF   + + +G+ Y H      + HRD+
Sbjct: 88  PTHLAIIMEYASGGELYERICNAGRFSED-EARF-FFQQLLSGVSYCHS---MQICHRDL 142
Query: 475 KSGNVLIDADMNARLG--DFGLARLFDHGKISHT--TNVVGTIGYIAPE-LARTGKASCS 529
           K  N L+D     RL   DFG ++      + H+   + VGT  YIAPE L R       
Sbjct: 143 KLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKI 198
Query: 530 TDVFAYGVLLLEIATGRRPID 550
            DV++ GV L  +  G  P +
Sbjct: 199 ADVWSCGVTLYVMLVGAYPFE 219

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH---TTNVVGTI 513
           GL Y+H      VIHRD+K  N+L++ +   ++GDFG+AR        H    T  V T 
Sbjct: 170 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 514 GYIAPELART-GKASCSTDVFAYGVLLLEIATGRR 547
            Y APEL  +  + + + D+++ G +  E+   R+
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           KR LL++ + +  G L S + +  +   +  +   I++ I   + +LH      + HRDV
Sbjct: 79  KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDV 135
Query: 475 KSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTD 531
           K  N+L    + D   +L DFG A+      +        T  Y+APE+    K   S D
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ---TPCYTPYYVAPEVLGPEKYDKSCD 192
Query: 532 VFAYGVLLLEIATGRRPIDSD 552
           +++ GV++  +  G  P  S+
Sbjct: 193 MWSLGVIMYILLCGFPPFYSN 213

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVL---------------PTRMREFAAEIESLGR 399
           +T  K ++Q + IG+G  G V   +  VL                T  +    E+  L  
Sbjct: 20  FTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK++++L      ++ L    D Y+    +D+ L    +  L  E+   ++  +  G+
Sbjct: 80  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR      +   T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATG 545
           E+      + + D+++ G ++ E+  G
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELVKG 221

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVLP---------------TRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  +L                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK+++ L      ++ L    D YI    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATG 545
           E+        + D+++ G ++ E+  G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVLP---------------TRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  +L                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK+++ L      ++ L    D YI    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATG 545
           E+        + D+++ G ++ E+  G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 437 NENFVLSWE-QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA------------ 483
           +EN  L  E    ++++ IA+G+ +LH      +IHRD+K  N+L+              
Sbjct: 124 DENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGA 180
Query: 484 -DMNARLGDFGLARLFDHGKISHTTNV---VGTIGYIAPEL---ARTGKASCSTDVFAYG 536
            ++   + DFGL +  D G+     N+    GT G+ APEL   +   + + S D+F+ G
Sbjct: 181 ENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
Query: 537 VLLLEI-ATGRRP 548
            +   I + G+ P
Sbjct: 241 CVFYYILSKGKHP 253

>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I Length = 242

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 102/256 (39%), Gaps = 41/256 (16%)
Query: 33  NETKTNQGLITRERASILKPSGALRLTDNAHNVI----GHAFYNKPIQMLDKSTSLSSKP 88
           N ++  + L  +  AS+++ +G L+L    +N+     G A Y  PI + + +T      
Sbjct: 10  NFSQNGKDLSFQGNASVIE-TGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTG----- 63
Query: 89  NASSFSTCFVFQIVT-PNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHL 147
             +SF T F F + T  N      GL F ++P P  P  +A  Y G+ N T     S   
Sbjct: 64  ELASFITSFSFFMETSANPKAATDGLTFFLAP-PDSPLRRAGGYFGLFNDTK-CDSSYQT 121
Query: 148 FAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWI 207
            A+EFDT+       D    H+GI+VN +KSI  E                       W 
Sbjct: 122 VAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAE----------------------RWN 159
Query: 208 DYDGVNRLVNVTICPMNKKNKLSFHF---GKXXXXXXXXXXXXXXAFQETMYVGFSAST- 263
              G+N + NV I        L+                         E + VGFS ST 
Sbjct: 160 KRYGLNNVANVEIIYEASSKTLTASLTYPSDQTSISVTSIVDLKEILPEWVSVGFSGSTY 219
Query: 264 -GRKVSSHFILGWSFS 278
            GR+ ++H +L W F+
Sbjct: 220 IGRQ-ATHEVLNWYFT 234

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVLP---------------TRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  +L                T  +    E+  +  
Sbjct: 21  FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC 80
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK+++ L      ++ L    D YI    +D+ L       L  E+   ++  +  G+
Sbjct: 81  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 141 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAP 195
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATG 545
           E+        + D+++ G ++ E+  G
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKG 222

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 437 NENFVLSWE-QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA------------ 483
           +EN  L  E    ++++ IA+G+ +LH      +IHRD+K  N+L+              
Sbjct: 124 DENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGA 180
Query: 484 -DMNARLGDFGLARLFDHGKISHTTNV---VGTIGYIAPEL---ARTGKASCSTDVFAYG 536
            ++   + DFGL +  D G+     N+    GT G+ APEL   +   + + S D+F+ G
Sbjct: 181 ENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMG 240
Query: 537 VLLLEI-ATGRRP 548
            +   I + G+ P
Sbjct: 241 CVFYYILSKGKHP 253

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 51/270 (18%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVL---------------PTRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  VL                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK++++L      ++ L    D Y+    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
           E+        + D+++ G ++ E+          H IL                     G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVR--------HKILFP-------------------G 227
Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMR 608
             Y+    +++ QLG  C     + +PT+R
Sbjct: 228 RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVLP---------------TRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  +L                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK+++ L      ++ L    D YI    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATG 545
           E+        + D+++ G ++ E+  G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 36/240 (15%)
Query: 368 EVIGTGGFGEVYKGVLPTR---------------------MREFAAEIESLGRLRHKHLV 406
           +++G G FG V +G L                        + EF +E   +    H +++
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 407 NLQGWCKRKRDL-----LLVYDYIPNGSLDSLLF----DNENFVLSWEQRFNIIKGIAAG 457
            L G C           +++  ++  G L + L     +     +  +     +  IA G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT-IGYI 516
           + YL     +  +HRD+ + N ++  DM   + DFGL++    G       +    + +I
Sbjct: 160 MEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 517 APELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDS-DHFILVDWVLEFQHLGQVLDVVD 574
           A E       +  +DV+A+GV + EIAT G  P     +  + D++L    L Q  D +D
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD 276

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVL---------------PTRMREFAAEIESLGR 399
           +T  K ++Q + IG+G  G V   +  VL                T  +    E+  L  
Sbjct: 18  FTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC 77
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK++++L      ++ L    D Y+    +D+ L    +  L  E+   ++  +  G+
Sbjct: 78  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI 137
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR      +   T  V T  Y AP
Sbjct: 138 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM--MTPYVVTRYYRAP 192
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATG 545
           E+        + D+++ G ++ E+  G
Sbjct: 193 EVILGMGYKENVDIWSVGCIMGELVKG 219

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 38/210 (18%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLRHKHLVNLQ- 409
           +  ++VIG G FG VY+  L     E  A             E++ + +L H ++V L+ 
Sbjct: 22  YTDTKVIGNGSFGVVYQAKL-CDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 410 -----GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK------GIAAGL 458
                G  K +  L LV DY+P     + ++         +Q   +I        +   L
Sbjct: 81  FFYSSGEKKDEVYLNLVLDYVP-----ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            Y+H      + HRD+K  N+L+D D    +L DFG A+    G+ +   + + +  Y A
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRA 190
Query: 518 PELA-RTGKASCSTDVFAYGVLLLEIATGR 546
           PEL       + S DV++ G +L E+  G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 38/211 (18%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLRHKHLVNLQ 409
            +  ++VIG G FG VY+  L     E  A             E++ + +L H ++V L+
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 410 GW---CKRKRDLL---LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK------GIAAG 457
            +      K+D++   LV DY+P       ++         +Q   +I        +   
Sbjct: 80  YFFYSSGEKKDVVYLNLVLDYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYI 516
           L Y+H      + HRD+K  N+L+D D    +L DFG A+    G+ +   + + +  Y 
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYR 189
Query: 517 APELA-RTGKASCSTDVFAYGVLLLEIATGR 546
           APEL       + S DV++ G +L E+  G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLRHKHLVNLQ- 409
           +  ++VIG G FG VY+  L     E  A             E++ + +L H ++V L+ 
Sbjct: 50  YTDTKVIGNGSFGVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 410 -----GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII------KGIAAGL 458
                G  K +  L LV DY+P       ++         +Q   +I        +   L
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPE-----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            Y+H      + HRD+K  N+L+D D    +L DFG A+    G+ +   + + +  Y A
Sbjct: 164 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRA 218
Query: 518 PELA-RTGKASCSTDVFAYGVLLLEIATGR 546
           PEL       + S DV++ G +L E+  G+
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 248

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 51/270 (18%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVL---------------PTRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  VL                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK++++L      ++ L    D Y+    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
           E+        + D+++ G ++ E+          H IL                     G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVR--------HKILFP-------------------G 227
Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMR 608
             Y+    +++ QLG  C     + +PT+R
Sbjct: 228 RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 108/270 (40%), Gaps = 51/270 (18%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVL---------------PTRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  VL                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKX 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK++++L      ++ L    D Y+    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
           E+        + D+++ G ++ E+          H IL                     G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVR--------HKILFP-------------------G 227
Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMR 608
             Y+    +++ QLG  C     + +PT+R
Sbjct: 228 RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 358 YTATKGFKQSEVIGTGGFGEV---YKGVLP---------------TRMREFAAEIESLGR 399
           +T  K ++  + IG+G  G V   Y  +L                T  +    E+  +  
Sbjct: 20  FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC 79
Query: 400 LRHKHLVNLQGWCKRKRDLLLVYD-YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
           + HK+++ L      ++ L    D YI    +D+ L       L  E+   ++  +  G+
Sbjct: 80  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH      +IHRD+K  N+++ +D   ++ DFGLAR    G     T  V T  Y AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAP 194
Query: 519 ELARTGKASCSTDVFAYGVLLLEIATG 545
           E+        + D+++ G ++ E+  G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFD--HGKISHTTNVVGTI 513
           GL Y+H      V+HRD+K  N+ I+  D+  ++GDFGLAR+ D  +    H +  + T 
Sbjct: 132 GLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 514 GYIAPELART-GKASCSTDVFAYGVLLLEIATGR 546
            Y +P L  +    + + D++A G +  E+ TG+
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLRHKHLVNLQ- 409
           +  ++VIG G FG VY+  L     E  A             E++ + +L H ++V L+ 
Sbjct: 27  YTDTKVIGNGSFGVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 410 -----GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII------KGIAAGL 458
                G  K +  L LV DY+P       ++         +Q   +I        +   L
Sbjct: 86  FFYSSGEKKDEVYLNLVLDYVPE-----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            Y+H      + HRD+K  N+L+D D    +L DFG A+    G+ +   + + +  Y A
Sbjct: 141 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRA 195
Query: 518 PELA-RTGKASCSTDVFAYGVLLLEIATGR 546
           PEL       + S DV++ G +L E+  G+
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 225

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLRHKHLVNLQ- 409
           +  ++VIG G FG VY+  L     E  A             E++ + +L H ++V L+ 
Sbjct: 56  YTDTKVIGNGSFGVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 410 -----GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII------KGIAAGL 458
                G  K +  L LV DY+P       ++         +Q   +I        +   L
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            Y+H      + HRD+K  N+L+D D    +L DFG A+    G+ +   + + +  Y A
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYRA 224
Query: 518 PELA-RTGKASCSTDVFAYGVLLLEIATGR 546
           PEL       + S DV++ G +L E+  G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLRHKHLVNLQ- 409
           +  ++VIG G FG VY+  L     E  A             E++ + +L H ++V L+ 
Sbjct: 58  YTDTKVIGNGSFGVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 410 -----GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII------KGIAAGL 458
                G  K +  L LV DY+P       ++         +Q   +I        +   L
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPE-----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            Y+H      + HRD+K  N+L+D D    +L DFG A+    G+ +   + + +  Y A
Sbjct: 172 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRA 226
Query: 518 PELA-RTGKASCSTDVFAYGVLLLEIATGR 546
           PEL       + S DV++ G +L E+  G+
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 256

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 38/211 (18%)
Query: 363 GFKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLRHKHLVNLQ 409
            +  ++VIG G FG VY+  L     E  A             E++ + +L H ++V L+
Sbjct: 40  SYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLR 98
Query: 410 ------GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII------KGIAAG 457
                 G  K +  L LV DY+P       ++         +Q   +I        +   
Sbjct: 99  YFFYSSGEKKDEVYLNLVLDYVPET-----VYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYI 516
           L Y+H      + HRD+K  N+L+D D    +L DFG A+    G+ +   + + +  Y 
Sbjct: 154 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICSRYYR 208
Query: 517 APELA-RTGKASCSTDVFAYGVLLLEIATGR 546
           APEL       + S DV++ G +L E+  G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 38/210 (18%)
Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLRHKHLVNLQ- 409
           +  ++VIG G FG VY+  L     E  A             E++ + +L H ++V L+ 
Sbjct: 60  YTDTKVIGNGSFGVVYQAKL-CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 410 -----GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNII------KGIAAGL 458
                G  K +  L LV DY+P       ++         +Q   +I        +   L
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPE-----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            Y+H      + HRD+K  N+L+D D    +L DFG A+    G+ +   + + +  Y A
Sbjct: 174 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRA 228
Query: 518 PELA-RTGKASCSTDVFAYGVLLLEIATGR 546
           PEL       + S DV++ G +L E+  G+
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 258

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 364 FKQSEVIGTGGFGEVYKGV-----LPTRMREFAAE-IESLGRLRH--------------- 402
           ++   ++G+GGFG VY G+     LP  ++    + I   G L +               
Sbjct: 10  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 403 ---KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
                ++ L  W +R    +L+ + +     D   F  E   L  E   +    +   + 
Sbjct: 70  SGFSGVIRLLDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H      V+HRD+K  N+LID +    +L DFG   L    K +  T+  GT  Y  P
Sbjct: 129 HCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPP 182
Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E  R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 221
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	670
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-122
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-105
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-104
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-73
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-58
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	3e-55
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-54
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	3e-54
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	8e-54
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	1e-53
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	2e-53
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	2e-53
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	6e-53
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	1e-52
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	2e-52
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-52
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	3e-52
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-52
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-51
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	2e-51
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-51
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	7e-51
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	8e-51
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	8e-51
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	2e-50
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	6e-50
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-49
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	2e-49
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-49
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	6e-49
3q4u_A	301	Activin receptor type-1; structural genomics conso	6e-49
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-49
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	1e-48
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	4e-48
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	1e-46
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-46
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-46
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	8e-46
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	1e-45
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	4e-44
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	1e-40
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-36
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-36
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-35
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-35
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-35
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-35
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-34
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-33
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-33
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-32
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-32
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-32
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-32
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-32
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-32
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-32
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-32
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-32
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-32
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	7e-32
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-31
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-31
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-31
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	2e-31
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-31
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-31
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-31
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-31
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-31
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	9e-31
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-30
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-30
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-30
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-30
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-30
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-30
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-30
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-30
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	7e-30
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	9e-30
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-29
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-29
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-29
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	6e-29
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-29
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-28
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-28
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-28
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-28
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-28
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-28
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-27
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-27
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-27
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-27
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-27
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-27
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-27
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-27
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-27
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-27
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	4e-27
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	4e-15
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-27
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-27
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-26
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-26
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-26
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-26
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-26
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-26
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-26
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-26
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-25
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-25
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-25
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-25
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-25
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-25
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-25
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-25
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-24
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-24
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-24
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-24
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-24
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-24
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-24
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	9e-24
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-24
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-24
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-23
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-23
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-23
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-23
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-23
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-23
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-23
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-23
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-23
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-23
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-22
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-22
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-22
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-22
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-22
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-22
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-22
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-22
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-22
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-21
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-21
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-21
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-21
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-21
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-21
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-21
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-21
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-21
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	5e-21
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-21
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	7e-21
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-21
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-20
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-20
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-20
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-20
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-20
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-20
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-20
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-20
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-20
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-20
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-20
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-19
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-19
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	1e-19
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-19
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-19
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-19
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-19
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-19
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-19
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-19
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-19
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-19
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-19
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-19
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-19
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-19
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-19
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-19
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-19
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-19
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	9e-19
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-18
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-18
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-18
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-18
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-18
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-18
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-18
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-18
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-18
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-18
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	9e-18
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-17
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-17
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-17
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-17
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	9e-17
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-16
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-16
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-16
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-16
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-16
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-16
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	8e-16
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	8e-16
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-15
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-15
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-14
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-13
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-13
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-13
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-13
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-13
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	6e-13
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-12
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-12
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	5e-12
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-11
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-11
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-10
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-10
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-10
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-10
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	9e-10
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-09
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-09
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-09
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	4e-09
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-09
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	5e-09
3rp9_A	458	Mitogen-activated protein kinase; structural genom	8e-09
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-08
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-07
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-07
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	5e-07
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	7e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	6e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	6e-06
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	5e-05
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	6e-05
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  365 bits (940), Expect = e-122
 Identities = 120/320 (37%), Positives = 171/320 (53%), Gaps = 26/320 (8%)

Query: 339 EILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT------------- 385
           E   +  L    RF   +L  A+  F    ++G GGFG+VYKG L               
Sbjct: 7   EEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEER 66

Query: 386 ---RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD--NENF 440
                 +F  E+E +    H++L+ L+G+C    + LLVY Y+ NGS+ S L +      
Sbjct: 67  TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126

Query: 441 VLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH 500
            L W +R  I  G A GL YLH+  +  +IHRDVK+ N+L+D +  A +GDFGLA+L D+
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186

Query: 501 GKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS------DH 553
              +H TT V GTIG+IAPE   TGK+S  TDVF YGV+LLE+ TG+R  D       D 
Sbjct: 187 KD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245

Query: 554 FILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
            +L+DWV       ++  +VD +L  +Y   E+E ++Q+ LLC+      RP M +V+R 
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305

Query: 614 LNGDELLPIIDNWSSLDSQR 633
           L GD L    + W   +  R
Sbjct: 306 LEGDGLAERWEEWQKEEMFR 325

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  321 bits (824), Expect = e-105
 Identities = 94/299 (31%), Positives = 146/299 (48%), Gaps = 34/299 (11%)

Query: 349 PHRFRYSDLYTATKGFKQSE------VIGTGGFGEVYKGVLPTRM--------------- 387
            H F + +L   T  F +         +G GGFG VYKG +                   
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71

Query: 388 ---REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF-VLS 443
              ++F  EI+ + + +H++LV L G+     DL LVY Y+PNGSL   L   +    LS
Sbjct: 72  ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131

Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI 503
           W  R  I +G A G+ +LHE      IHRD+KS N+L+D    A++ DFGLAR  +    
Sbjct: 132 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188

Query: 504 SH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS--DHFILVDWV 560
           +  T+ +VGT  Y+APE A  G+ +  +D++++GV+LLEI TG   +D   +  +L+D  
Sbjct: 189 TVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247

Query: 561 LE-FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE 618
            E       + D +D  +        +E +  +   C H+K   RP +++V + L    
Sbjct: 248 EEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  319 bits (819), Expect = e-104
 Identities = 102/290 (35%), Positives = 147/290 (50%), Gaps = 25/290 (8%)

Query: 350 HRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRM---------------REFAAEI 394
           +R    DL  AT  F    +IG G FG+VYKGVL                    EF  EI
Sbjct: 27  YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEI 86

Query: 395 ESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLF--DNENFVLSWEQRFNIIK 452
           E+L   RH HLV+L G+C  + +++L+Y Y+ NG+L   L+  D     +SWEQR  I  
Sbjct: 87  ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH-TTNVVG 511
           G A GL YLH      +IHRDVKS N+L+D +   ++ DFG+++       +H +T V G
Sbjct: 147 GAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKG 203

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID----SDHFILVDWVLEFQHLG 567
           T+GYI PE    G+ +  +DV+++GV+L E+   R  I      +   L +W +E  + G
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263

Query: 568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD 617
           Q+  +VDPNL        +       + C    +E RP+M  VL  L   
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  239 bits (611), Expect = 1e-73
 Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 43/304 (14%)

Query: 352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKG----------VLPTRMR---EFAAEIESLG 398
               +LY  +   +  EV   G FG V+K           + P + +   +   E+ SL 
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLP 73

Query: 399 RLRHKHLVNLQGWCKRKRD----LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGI 454
            ++H++++   G  KR       L L+  +   GSL   L  N   V+SW +  +I + +
Sbjct: 74  GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETM 130

Query: 455 AAGLLYLHEE-------WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH-T 506
           A GL YLHE+        +  + HRD+KS NVL+  ++ A + DFGLA  F+ GK +  T
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT 190

Query: 507 TNVVGTIGYIAPELARTG-----KASCSTDVFAYGVLLLEIATGRRPIDSDH----FILV 557
              VGT  Y+APE+          A    D++A G++L E+A+     D           
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250

Query: 558 DWVLEFQHLGQVLDVV-----DPNLGSSYVVAE-MELVLQLGLLCSHQKAEARPTMRQVL 611
           + + +   L  + +VV      P L   +     M ++ +    C    AEAR +   V 
Sbjct: 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310

Query: 612 RYLN 615
             + 
Sbjct: 311 ERIT 314

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  199 bits (507), Expect = 2e-58
 Identities = 69/315 (21%), Positives = 110/315 (34%), Gaps = 54/315 (17%)

Query: 352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKG----------VLPTR-MREFAAEIE--SLG 398
              S+        K  E+IG G +G VYKG          V      + F  E     + 
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVP 62

Query: 399 RLRHKHLVNLQGWCKR-----KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
            + H ++       +R     + + LLV +Y PNGSL   L  +      W     +   
Sbjct: 63  LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHS 119

Query: 454 IAAGLLYLHEEWEQ------VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH-- 505
           +  GL YLH E  +       + HRD+ S NVL+  D    + DFGL+      ++    
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179

Query: 506 -----TTNVVGTIGYIAPELAR-------TGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
                  + VGTI Y+APE+            A    D++A G++  EI      +    
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239

Query: 554 FI------LVDWVLEFQHLGQVLDVVD-----PNLGSSYVVAEMELVLQLGLL--CSHQK 600
            +          V        +  +V      P    ++    + +      +  C  Q 
Sbjct: 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQD 299

Query: 601 AEARPTMRQVLRYLN 615
           AEAR T +     + 
Sbjct: 300 AEARLTAQXAEERMA 314

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234

 Score =  187 bits (476), Expect = 3e-55
 Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 36/262 (13%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNA--HNVIGHAFYNKPIQMLDKSTSL 84
           F +  F     + G +  +  + +   G L +  +   +    HA Y  P+ + D +T  
Sbjct: 3   FNYTRFK----DDGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATG- 57

Query: 85  SSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPS 144
               N +SF T F F +          G+ F ++P  +     +    G L  T+     
Sbjct: 58  ----NVASFITSFSFIVSNVQRYPPTDGVVFFLAPWGTEIPPNS--QGGYLGITDSSNSQ 111

Query: 145 NHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQ 204
           N   A+EFD+     +    + +H+GI+VNS+ S+K             ++   SG   +
Sbjct: 112 NQFVAVEFDSHPNVWDPKSLRSSHIGIDVNSIMSLK-----------AVNWNRVSGSLEK 160

Query: 205 AWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAST- 263
           A I YD   +++ V +   N                +S  +DL     E + VGFSA+T 
Sbjct: 161 ATIIYDSDTKILTVVMTHQN-----------GQITTISQEIDLKTVLPEKVSVGFSATTW 209

Query: 264 GRKVSSHFILGWSFSMNGAAPS 285
             +   H I  WSF+     P 
Sbjct: 210 NPERERHDIYSWSFTSTLKEPE 231

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  187 bits (478), Expect = 2e-54
 Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 45/292 (15%)

Query: 342 EDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGV----------------LPT 385
           +D ++       + DL          E IG G FG V++                     
Sbjct: 30  DDMDIP------WCDL-------NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAE 76

Query: 386 RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSW 444
           R+ EF  E+  + RLRH ++V   G   +  +L +V +Y+  GSL  LL  +     L  
Sbjct: 77  RVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDE 136

Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS 504
            +R ++   +A G+ YLH      ++HR++KS N+L+D     ++ DFGL+RL     +S
Sbjct: 137 RRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195

Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ 564
             +   GT  ++APE+ R   ++  +DV+++GV+L E+AT ++P  + +   V   + F+
Sbjct: 196 SKSA-AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254

Query: 565 HLG-QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
               ++   ++P +          ++      C   +   RP+   ++  L 
Sbjct: 255 CKRLEIPRNLNPQVA--------AIIEG----CWTNEPWKRPSFATIMDLLR 294

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234

 Score =  185 bits (469), Expect = 3e-54
 Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 27/254 (10%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSS 86
           F+   F+  + N  LI +           L LT    N +G A Y+ PI + D+ T    
Sbjct: 6   FLITKFSPDQQN--LIFQGDGYT--TKEKLTLTKAVKNTVGRALYSSPIHIWDRET---- 57

Query: 87  KPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNH 146
             N ++F T F F I  PNS     G  F ++P  +        YLG+ NS   +  +  
Sbjct: 58  -GNVANFVTSFTFVINAPNSYNVADGFTFFIAPVDT-KPQTGGGYLGVFNSAE-YDKTTQ 114

Query: 147 LFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAW 206
             A+EFDT         ++  H+GI+VNS+KS+             + + L++G+     
Sbjct: 115 TVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSV-----------NTKSWKLQNGEEANVV 163

Query: 207 IDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRK 266
           I ++    ++ V++   N     +    + +   LS  + L     E + +GFSA+TG +
Sbjct: 164 IAFNAATNVLTVSLTYPN-----NSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAE 218

Query: 267 VSSHFILGWSFSMN 280
            ++H +L WSF   
Sbjct: 219 YAAHEVLSWSFHSE 232

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253

 Score =  184 bits (467), Expect = 8e-54
 Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 44/274 (16%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F +N F   + N   +  +  +I+  SG L+L     N       +G A Y+ PI + DK
Sbjct: 6   FSWNKFVPKQPN---MILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDK 62

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
            T      + +SF+  F F    P++ +   GLAF ++P  + P      + G L   N+
Sbjct: 63  ETG-----SVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQT----HAGYLGLFNE 113

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
           ++  + + A+EFDT   +  + D    H+GINVNS++SIK              + L + 
Sbjct: 114 NESGDQVVAVEFDT---FRNSWDPPNPHIGINVNSIRSIKTTS-----------WDLANN 159

Query: 201 DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS 260
              +  I YD    L+  ++   ++           +  +LS  +DL  +  E + +GFS
Sbjct: 160 KVAKVLITYDASTSLLVASLVYPSQ----------RTSNILSDVVDLKTSLPEWVRIGFS 209

Query: 261 ASTGRKV--SSHFILGWSFSMNGAAPSLNLSQIP 292
           A+TG  +   SH +L WSF+ N    S N+  + 
Sbjct: 210 AATGLDIPGESHDVLSWSFASNLPHASSNIDPLD 243

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232

 Score =  183 bits (465), Expect = 1e-53
 Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 35/256 (13%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLT-DNAHNVIGHAFYNKPIQMLDKSTSLS 85
           F FN F+  + N  +  +   ++L  +G ++LT  N  N +G   Y  P+++   +T   
Sbjct: 6   FNFNSFS--EGNPAINFQGDVTVL-SNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG-- 60

Query: 86  SKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSN 145
              N +SF T F F++          G+ F ++P+ +     +    G     +D K + 
Sbjct: 61  ---NVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIG--GGTLGVSDTKGAG 115

Query: 146 HLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQA 205
           H   +EFDT +  +E +D   +HVGI+VNS+ S+K  P           +   SG  V+ 
Sbjct: 116 HFVGVEFDTYSN-SEYNDPPTDHVGIDVNSVDSVKTVP-----------WNSVSGAVVKV 163

Query: 206 WIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGR 265
            + YD   + ++V           +          ++  +DL     E +  GFSAS   
Sbjct: 164 TVIYDSSTKTLSV-----------AVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSL 212

Query: 266 K-VSSHFILGWSFSMN 280
                H I  WSF+  
Sbjct: 213 GGRQIHLIRSWSFTST 228

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240

 Score =  183 bits (464), Expect = 2e-53
 Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 38/267 (14%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F  F   + +   +  +  + +  + AL+LT            +G A Y  PI++   
Sbjct: 6   FTFTDFESGQQD---LIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQ- 61

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
                S    +SF T F F I   +S        F  SP    P G     LG+  S+N+
Sbjct: 62  -----SSSLVASFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNN 116

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
               N + ++EFDT     +  D    H+GI+VNS++S       +            +G
Sbjct: 117 AGSDNGVVSVEFDTYP-NTDIGDPNYRHIGIDVNSIRSKAASKWDWQ-----------NG 164

Query: 201 DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS 260
               A I Y+  ++ ++V              +   S  ++S  ++L+    + + VGFS
Sbjct: 165 KTATAHISYNSASKRLSVV-----------SSYPNSSPVVVSFDVELNNVBPBWVRVGFS 213

Query: 261 ASTGRKVSSHFILGWSFSMNGAAPSLN 287
           A+TG+   ++ IL WSF  +      N
Sbjct: 214 ATTGQYTQTNNILAWSFRSSLMGYQAN 240

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261

 Score =  183 bits (464), Expect = 2e-53
 Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 41/287 (14%)

Query: 11  LFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------ 64
           +      +  S     F F  F+  + N   +  +  +    +  L+LT    N      
Sbjct: 1   MLLNRANSTDSLS---FSFINFDRDERN---LIFQGDAHTSRNNILQLTRTDSNGAPVRS 54

Query: 65  VIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFP 124
            +G   ++  +++ +KST+       ++  T F F + +P S        F   P  + P
Sbjct: 55  TVGRILHSAQVRLWEKSTN-----RVANLQTQFSFFLSSPLSNPADGIAFFIAPPDTTIP 109

Query: 125 GGKAEHYLGILN-STNDHKPSNHLFAIEFDTV-NGYNETSDSQGNHVGINVNSMKSIKLE 182
            G A   LG+ N  T  ++ +N + A+EFDT     + T D    H+GI+VNS++S K+ 
Sbjct: 110 SGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVV 169

Query: 183 PAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLS 242
                       +    G  +   + Y+   R ++V              +    +  LS
Sbjct: 170 R-----------WERREGKTLNVLVTYNPSTRTIDVVA-----------TYPDGQRYQLS 207

Query: 243 LPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPSLNLS 289
             +DL+    E + VGFSA++G +  +H +  WSF+      +    
Sbjct: 208 HVVDLTTILPEWVRVGFSAASGEQFQTHNLESWSFTSTLLYTAQKED 254

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251

 Score =  181 bits (461), Expect = 6e-53
 Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 41/273 (15%)

Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLD 79
            F+F+ F   + N   +  +  +++  +G L+LT+   N       +G A Y+ PI + D
Sbjct: 5   SFVFSKFKPLEPN---LILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWD 61

Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTN 139
            +T        +SF+T F F I  PN      GLAF ++P  S P      +LG+ +S  
Sbjct: 62  SATG-----LVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGG-GFLGLFDSAV 115

Query: 140 DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLES 199
               +    A+EFDT       +D    H+G +VNS+ SIK              ++L +
Sbjct: 116 SG-STYQTVAVEFDTYENT-VFTDPPYTHIGFDVNSISSIKTVK-----------WSLAN 162

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF 259
           G+  +  I Y+   +L+  ++   +            +  +L+  +DLS    E + VGF
Sbjct: 163 GEAAKVLITYNSAVKLLVASLVYPS----------SKTSFILADIVDLSSVLPEWVRVGF 212

Query: 260 SASTG---RKVSSHFILGWSFSMNGAAPSLNLS 289
           SA+TG    K+ +H +  WSF+   A      S
Sbjct: 213 SAATGASGGKIETHDVFSWSFASKLAGXXTKDS 245

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237

 Score =  180 bits (458), Expect = 1e-52
 Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 41/265 (15%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV-----IGHAFYNKPIQMLDKS 81
           F F  F   +     +  +  +++  +G L+LT+  + V     +G A Y  P Q+ D +
Sbjct: 6   FSFPKFAPNQPY---LINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDST 62

Query: 82  TSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDH 141
           T      N +SF T F F I  PN      GLAF ++P  + P       LGI       
Sbjct: 63  TG-----NVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPLDLGG-MLGIFKDGY-F 115

Query: 142 KPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGD 201
             SN + A+EFDT +  +   D +G H+GINVNS++SIK  P           +   +G+
Sbjct: 116 NKSNQIVAVEFDTFSNGDW--DPKGRHLGINVNSIESIKTVP-----------WNWTNGE 162

Query: 202 PVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSA 261
               +I Y+   + +  ++   +            +  ++   +D+     E +  GFSA
Sbjct: 163 VANVFISYEASTKSLTASLVYPSL----------ETSFIIDAIVDVKIVLPEWVRFGFSA 212

Query: 262 STGRK---VSSHFILGWSFSMNGAA 283
           +TG     V ++ +L WSF  N   
Sbjct: 213 TTGIDKGYVQTNDVLSWSFESNLPG 237

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257

 Score =  180 bits (458), Expect = 2e-52
 Identities = 74/276 (26%), Positives = 112/276 (40%), Gaps = 36/276 (13%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F  F  +     +I +  A+    +G L+L              G A Y+ P+Q+ D 
Sbjct: 7   FTFPNFW-SDVEDSIIFQGDANT--TAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDN 63

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
            T      + +SF T F F +    +G    GLAF ++P  S      E+      ST  
Sbjct: 64  KT-----ESVASFYTEFTFFLKITGNG-PADGLAFFLAPPDSDVKDAGEYLGLFNKSTAT 117

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
               N + A+EFDT        +    H+GINVNS+ S+  +          ED  + SG
Sbjct: 118 QPSKNQVVAVEFDTWTNP-NFPEPSYRHIGINVNSIVSVATKRW--------EDSDIFSG 168

Query: 201 DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS 260
               A I YDG   ++ V              +   S  +LS  +D+     E++ VG S
Sbjct: 169 KIATARISYDGSAEILTV-----------VLSYPDGSDYILSHSVDMRQNLPESVRVGIS 217

Query: 261 ASTGRKVS-SHFILGWSFSMNGAAPSLNLSQIPSLP 295
           ASTG     + +IL W FS N  + S+  +  P + 
Sbjct: 218 ASTGNNQFLTVYILSWRFSSNLQSTSVKAAMEPEIT 253

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252

 Score =  180 bits (457), Expect = 3e-52
 Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 50/278 (17%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F  FNET      +  +R + +  SG LRLT+   N       +G AFY+ PIQ+ D 
Sbjct: 6   FNFQRFNETN-----LILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
           +T        +SF+T F F I  PN+     GLAF + P  S P        G L   + 
Sbjct: 61  TTG-----TVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKD----KGGFLGLFDG 111

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
              + H  A+EFDT+   +   D    H+GI+VNS++SIK     +            +G
Sbjct: 112 SNSNFHTVAVEFDTLYNKDW--DPTERHIGIDVNSIRSIKTTRWDFV-----------NG 158

Query: 201 DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS 260
           +  +  I YD    L+  ++   ++           +  ++S  +DL     E + VGFS
Sbjct: 159 ENAEVLITYDSSTNLLVASLVYPSQ----------KTSFIVSDTVDLKSVLPEWVSVGFS 208

Query: 261 ASTG---RKVSSHFILGWSFSMN----GAAPSLNLSQI 291
           A+TG     V ++ +L WSF+        +  LNL+ +
Sbjct: 209 ATTGINKGNVETNDVLSWSFASKLSDETTSEGLNLANL 246

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  180 bits (459), Expect = 8e-52
 Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 44/273 (16%)

Query: 364 FKQSEVIGTGGFGEVYKGVL------------PTRMREFAAEIESLGRLRHKHLVNLQGW 411
            +  EV+G G FG V K                +  + F  E+  L R+ H ++V L G 
Sbjct: 10  IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGA 69

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
           C     + LV +Y   GSL ++L   E     +     +     + G+ YLH    + +I
Sbjct: 70  CLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127

Query: 471 HRDVKSGNVLIDADMN-ARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           HRD+K  N+L+ A     ++ DFG A        +H TN  G+  ++APE+      S  
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHMTNNKGSAAWMAPEVFEGSNYSEK 183

Query: 530 TDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG----QVLDVVDPNLG---SSYV 582
            DVF++G++L E+ T R+P              F  +G    +++  V           +
Sbjct: 184 CDVFSWGIILWEVITRRKP--------------FDEIGGPAFRIMWAVHNGTRPPLIKNL 229

Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
              +E ++     C  +    RP+M ++++ + 
Sbjct: 230 PKPIESLMT---RCWSKDPSQRPSMEEIVKIMT 259

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  179 bits (456), Expect = 1e-51
 Identities = 62/313 (19%), Positives = 122/313 (38%), Gaps = 66/313 (21%)

Query: 336 AQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTR--------- 386
           ++F       L        +++       +  + IG GGFG V+KG L            
Sbjct: 6   SEFPKSRLPTLA------DNEI-------EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL 52

Query: 387 --------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDS 432
                          +EF  E+  +  L H ++V L G         +V +++P G L  
Sbjct: 53  ILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYH 110

Query: 433 LLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID-----ADMNA 487
            L  ++   + W  +  ++  IA G+ Y+       ++HRD++S N+ +      A + A
Sbjct: 111 RL-LDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCA 168

Query: 488 RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST--DVFAYGVLLLEIATG 545
           ++ DFGL++   H      + ++G   ++APE     + S +   D +++ ++L  I TG
Sbjct: 169 KVADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224

Query: 546 RRPIDSDHFILVDWVLEFQHLGQVLDV---VDPNLGSSYVVAEMELVLQLGLLCSHQKAE 602
             P D   +  + ++   +  G    +     P L              +  LC     +
Sbjct: 225 EGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLR------------NVIELCWSGDPK 272

Query: 603 ARPTMRQVLRYLN 615
            RP    +++ L+
Sbjct: 273 KRPHFSYIVKELS 285

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242

 Score =  177 bits (449), Expect = 2e-51
 Identities = 77/272 (28%), Positives = 118/272 (43%), Gaps = 50/272 (18%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV-----IGHAFYNKPIQMLDKS 81
           F FN F++ +     +  +R + +  +  L LT   + V      G A Y KP+Q+ D +
Sbjct: 6   FNFNQFHQNEEQ---LKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 62

Query: 82  TSLSSKPNASSFSTCFVFQIVTPNSGQ-GGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
           T      N +SF T F F I  P        GL F ++P P+   G+   Y GI N  + 
Sbjct: 63  TG-----NVASFETRFSFSIRQPFPRPHPADGLVFFIAP-PNTQTGEGGGYFGIYNPLS- 115

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
                   A+EFDT   +  T D Q  H+GI+VNS+ S K  P           FTL++G
Sbjct: 116 ---PYPFVAVEFDT---FRNTWDPQIPHIGIDVNSVISTKTVP-----------FTLDNG 158

Query: 201 DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS 260
                 I YD   ++++V +   +            +   ++  +DL     E++ VGFS
Sbjct: 159 GIANVVIKYDASTKILHVVLVFPSL----------GTIYTIADIVDLKQVLPESVNVGFS 208

Query: 261 ASTG-------RKVSSHFILGWSFSMNGAAPS 285
           A+TG           +H IL WSFS +    +
Sbjct: 209 AATGDPSGKQRNATETHDILSWSFSASLPGTN 240

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  178 bits (453), Expect = 3e-51
 Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 46/296 (15%)

Query: 339 EILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL--------------- 383
           +  +DWE+          +          + IG+G FG VYKG                 
Sbjct: 14  DAADDWEIP------DGQI-------TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT 60

Query: 384 PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLS 443
           P +++ F  E+  L + RH +++   G+      L +V  +    SL   L  +E     
Sbjct: 61  PQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASET-KFE 118

Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI 503
            ++  +I +  A G+ YLH    + +IHRD+KS N+ +  D   ++GDFGLA        
Sbjct: 119 MKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175

Query: 504 SHT-TNVVGTIGYIAPELARTGKASCST---DVFAYGVLLLEIATGRRPIDS-DHFILVD 558
           SH    + G+I ++APE+ R   ++  +   DV+A+G++L E+ TG+ P  + ++   + 
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 235

Query: 559 WVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            ++    L   L  V  N           L+ +    C  +K + RP+  ++L  +
Sbjct: 236 EMVGRGSLSPDLSKVRSNCPKRMK----RLMAE----CLKKKRDERPSFPRILAEI 283

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242

 Score =  175 bits (445), Expect = 7e-51
 Identities = 65/271 (23%), Positives = 105/271 (38%), Gaps = 36/271 (13%)

Query: 21  SQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV---IGHAFYNKPIQM 77
                 F F+ F   + N   I  +  + +  +G L++T  +      IG A Y  PIQ+
Sbjct: 2   LSDDLSFNFDKFVPNQKN---IIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQI 58

Query: 78  LDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNS 137
            D  T        +SF+T F F +    S        F        P G +    G+ +S
Sbjct: 59  WDSIT-----GKVASFATSFSFVVKADKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSS 113

Query: 138 TNDHKPSNHLFAIEFDTV-NGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFT 196
           ++  K SN + A+EFDT         D    H+GI+VNS+KSIK              + 
Sbjct: 114 SD-SKSSNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVK-----------WD 161

Query: 197 LESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY 256
             +G+     I Y    + + V +   +               +++  +DL     E + 
Sbjct: 162 WRNGEVADVVITYRAPTKSLTVCLSYPSDGTS----------NIITASVDLKAILPEWVS 211

Query: 257 VGFSASTGR--KVSSHFILGWSFSMNGAAPS 285
           VGFS   G   +  +H +L W F+ N  A +
Sbjct: 212 VGFSGGVGNAAEFETHDVLSWYFTSNLEANN 242

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  177 bits (452), Expect = 8e-51
 Identities = 67/318 (21%), Positives = 109/318 (34%), Gaps = 86/318 (27%)

Query: 341 LEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----------------P 384
           +             SDL          EV+G G FG+  K                    
Sbjct: 2   MPHRIFR------PSDL-------IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDE 48

Query: 385 TRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSW 444
              R F  E++ +  L H +++   G   + + L  + +YI  G+L  ++   ++    W
Sbjct: 49  ETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS-QYPW 107

Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS 504
            QR +  K IA+G+ YLH      +IHRD+ S N L+  + N  + DFGLARL    K  
Sbjct: 108 SQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164

Query: 505 -------------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS 551
                            VVG   ++APE+          DVF++G++L EI         
Sbjct: 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA--- 221

Query: 552 DHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM---------------ELVLQLGLLC 596
                                 DP+     +   +                    + + C
Sbjct: 222 ----------------------DPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRC 259

Query: 597 SHQKAEARPTMRQVLRYL 614
                E RP+  ++  +L
Sbjct: 260 CDLDPEKRPSFVKLEHWL 277

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  176 bits (449), Expect = 8e-51
 Identities = 54/296 (18%), Positives = 109/296 (36%), Gaps = 54/296 (18%)

Query: 342 EDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----------------PT 385
           +   +D      +  L            +     GE++KG                    
Sbjct: 3   KHSGID------FKQL-------NFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTR 49

Query: 386 RMREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLS 443
           + R+F  E   L    H +++ + G C+        L+  ++P GSL ++L +  NFV+ 
Sbjct: 50  KSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVD 109

Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI 503
             Q       +A G+ +LH   E ++    + S +V+ID DM AR+    +   F     
Sbjct: 110 QSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSF----- 163

Query: 504 SHTTNVVGTIGYIAPELARTGKASCST---DVFAYGVLLLEIATGRRPIDSDHFILVDWV 560
             +   +    ++APE  +      +    D++++ VLL E+ T   P      + +   
Sbjct: 164 -QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK 222

Query: 561 LEFQHLG-QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           +  + L   +   + P++         +L+      C ++    RP    ++  L 
Sbjct: 223 VALEGLRPTIPPGISPHVS--------KLMKI----CMNEDPAKRPKFDMIVPILE 266

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233

 Score =  174 bits (442), Expect = 2e-50
 Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 44/264 (16%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV-----IGHAFYNKPIQMLDKS 81
           F F  FN  + N   +  +  +++  +G L LT  A        +G A Y  PI + D +
Sbjct: 6   FSFTNFNPNQNN---LILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNT 62

Query: 82  TSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDH 141
           T        +SF+T F F +  P +     GLAF ++P  + P  +        +  +D 
Sbjct: 63  TL-------ASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGGFLGLFADRAHD- 114

Query: 142 KPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGD 201
             S    A+EFDT   Y+   D    H+GI+ N ++S K  P           F +  G+
Sbjct: 115 -ASYQTVAVEFDT---YSNAWDPNYTHIGIDTNGIESKKTTP-----------FDMVYGE 159

Query: 202 PVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSA 261
                I Y    + +  ++                +   +S  +DL     E + VGFSA
Sbjct: 160 KANIVITYQASTKALAASL----------VFPVSQTSYAVSARVDLRDILPEYVRVGFSA 209

Query: 262 STGRK---VSSHFILGWSFSMNGA 282
           +TG     V +H I+ WSF+++ A
Sbjct: 210 TTGLNAGVVETHDIVSWSFAVSLA 233

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239

 Score =  173 bits (439), Expect = 6e-50
 Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 43/265 (16%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLDK 80
           F F+ F     N   +T + A+++  SG L+LT    N        G   Y KP+ M D 
Sbjct: 6   FSFSEFEPGNDN---LTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDS 62

Query: 81  STSLSSKPNASSFSTCFVFQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTN 139
           +T        +SF T F F I  P        GL F + P  S P      YLG+ N++ 
Sbjct: 63  TTG-----TVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQ-GYGYLGVFNNSK 116

Query: 140 DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLES 199
               S    A+EFDT +  N     Q  H+GI+VNS++SIK +P           F L++
Sbjct: 117 QDN-SYQTLAVEFDTFS--NPWDPPQVPHIGIDVNSIRSIKTQP-----------FQLDN 162

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF 259
           G      I YD  +++++V +   +            +   ++  +D+     + + VG 
Sbjct: 163 GQVANVVIKYDAPSKILHVVLVYPSS----------GAIYTIAEIVDVKQVLPDWVDVGL 212

Query: 260 SASTGRK---VSSHFILGWSFSMNG 281
           S +TG +     +H +  WSF  + 
Sbjct: 213 SGATGAQRDAAETHDVYSWSFQASL 237

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  173 bits (440), Expect = 1e-49
 Identities = 72/299 (24%), Positives = 125/299 (41%), Gaps = 58/299 (19%)

Query: 344 WELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGV------------------LPT 385
            E+D      +++L          E+IG GGFG+VY+                    +  
Sbjct: 2   LEID------FAEL-------TLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQ 48

Query: 386 RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
            +     E +    L+H +++ L+G C ++ +L LV ++   G L+ +L       +  +
Sbjct: 49  TIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPD 105

Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID--------ADMNARLGDFGLARL 497
              N    IA G+ YLH+E    +IHRD+KS N+LI         ++   ++ DFGLAR 
Sbjct: 106 ILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165

Query: 498 FDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV 557
           +     +   +  G   ++APE+ R    S  +DV++YGVLL E+ TG  P      + V
Sbjct: 166 WHR---TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV 222

Query: 558 DWVLEFQHL-GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            + +    L   +                 +L+      C +    +RP+   +L  L 
Sbjct: 223 AYGVAMNKLALPIPSTCPEPFA--------KLMED----CWNPDPHSRPSFTNILDQLT 269

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242

 Score =  171 bits (435), Expect = 2e-49
 Identities = 62/260 (23%), Positives = 106/260 (40%), Gaps = 35/260 (13%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV----IGHAFYNKPIQMLDKST 82
           F F  F++   +   ++ +  + +  +G L+L    +N+     G A Y  PI + + +T
Sbjct: 6   FKFKNFSQNGKD---LSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNT 62

Query: 83  SLSSKPNASSFSTCFVFQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDH 141
                   +SF T F F + T  N      GL F ++P P  P  +A  Y G+ N T   
Sbjct: 63  G-----ELASFITSFSFFMETSANPKAATDGLTFFLAP-PDSPLRRAGGYFGLFNDTK-C 115

Query: 142 KPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGD 201
             S    A+EFDT+       D    H+GI+VN +KSI  E           +      +
Sbjct: 116 DSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERW---------NKRYGLNN 166

Query: 202 PVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSA 261
                I Y+  ++ +  ++           +    +   ++  +DL     E + VGFS 
Sbjct: 167 VANVEIIYEASSKTLTASL----------TYPSDQTSISVTSIVDLKEILPEWVSVGFSG 216

Query: 262 STGRKV-SSHFILGWSFSMN 280
           ST     ++H +L W F+  
Sbjct: 217 STYIGRQATHEVLNWYFTST 236

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  174 bits (442), Expect = 2e-49
 Identities = 66/303 (21%), Positives = 117/303 (38%), Gaps = 57/303 (18%)

Query: 341 LEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL---------------PT 385
           L++W++       +  L       +  E+IG G FG+VY G                   
Sbjct: 25  LQEWDIP------FEQL-------EIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNED 71

Query: 386 RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWE 445
           +++ F  E+ +  + RH+++V   G C     L ++       +L S++ D +  VL   
Sbjct: 72  QLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI-VLDVN 130

Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH 505
           +   I + I  G+ YLH    + ++H+D+KS NV  D +    + DFGL  +    +   
Sbjct: 131 KTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186

Query: 506 ----TTNVVGTIGYIAPELARTGKASCST---------DVFAYGVLLLEIATGRRPIDSD 552
                    G + ++APE+ R                 DVFA G +  E+     P  + 
Sbjct: 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246

Query: 553 HFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
               + W +             PNL    +  E+  +L     C   + E RPT  +++ 
Sbjct: 247 PAEAIIWQMGTGMK--------PNLSQIGMGKEISDILL---FCWAFEQEERPTFTKLMD 295

Query: 613 YLN 615
            L 
Sbjct: 296 MLE 298

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253

 Score =  171 bits (433), Expect = 6e-49
 Identities = 74/278 (26%), Positives = 120/278 (43%), Gaps = 49/278 (17%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F  FN +      I +  A++   S  LRLT    N       +G AFY+ PIQ+ DK
Sbjct: 6   FSFKNFNSS----SFILQGDATV--SSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDK 59

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
           ST        +S++T F   I  PN      G+AF + P  S P   +  +LG+ +S   
Sbjct: 60  STG-----AVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSG-FLGVFDSDVY 113

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
              S    A+EFDT +  +   D    H+GI+VNS+KSI+                L +G
Sbjct: 114 D-NSAQTVAVEFDTFSNTDW--DPTSRHIGIDVNSIKSIRTASW-----------GLANG 159

Query: 201 DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS 260
              +  I Y+    L+  ++   +          + +  ++S  +D++    E + +GFS
Sbjct: 160 QNAEILITYNAATSLLVASLVHPS----------RRTSYIVSERVDITNELPEYVSIGFS 209

Query: 261 ASTGRK---VSSHFILGWSFSMN----GAAPSLNLSQI 291
           A+TG       +H +L WSF+           L+++  
Sbjct: 210 ATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASY 247

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  172 bits (438), Expect = 6e-49
 Identities = 65/291 (22%), Positives = 108/291 (37%), Gaps = 49/291 (16%)

Query: 368 EVIGTGGFGEVYKG----------VLPTR-MREFAAEIE--SLGRLRHKHLVNLQGWCKR 414
           E +G G +GEV++G          +  +R  + +  E E  +   LRH++++        
Sbjct: 14  ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73

Query: 415 KRD----LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ--- 467
            R     L L+  Y   GSL   L       L       I+  IA+GL +LH E      
Sbjct: 74  SRHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQG 130

Query: 468 --VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS---HTTNVVGTIGYIAPEL-- 520
              + HRD+KS N+L+  +    + D GLA +               VGT  Y+APE+  
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190

Query: 521 ----ARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV---DWVLEFQHLGQVLDVV 573
                    +    D++A+G++L E+A                 D V        +  VV
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVV 250

Query: 574 ---------DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                         S   +  +  +++    C +Q   AR T  ++ + L 
Sbjct: 251 CVDQQRPNIPNRWFSDPTLTSLAKLMK---ECWYQNPSARLTALRIKKTLT 298

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226

 Score =  169 bits (429), Expect = 1e-48
 Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 47/260 (18%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV---IGHAFYNKPIQMLDKSTS 83
           F    FN+T      +  +  + +   G L LT+   N    +G AFY+ PIQ+ D++  
Sbjct: 6   FNVETFNKTN-----LILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID 60

Query: 84  LSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKP 143
                N +SFST F F+I   N     +GLAF + P  S P  K   YLG+ N+TN    
Sbjct: 61  -----NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPKLKGR-YLGLFNTTNYD-R 113

Query: 144 SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPV 203
             H  A+ FDT            N + I+VNS++ I  E           +F   +G+  
Sbjct: 114 DAHTVAVVFDT----------VSNRIEIDVNSIRPIATESC---------NFGHNNGEKA 154

Query: 204 QAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAST 263
           +  I YD     + V++   +             +  +S  + L    ++ + VGFSA++
Sbjct: 155 EVRITYDSPKNDLRVSLLYPSS----------EEKCHVSATVPLEKEVEDWVSVGFSATS 204

Query: 264 G---RKVSSHFILGWSFSMN 280
           G       +H +L WSFS N
Sbjct: 205 GSKKETTETHNVLSWSFSSN 224

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238

 Score =  168 bits (426), Expect = 4e-48
 Identities = 79/271 (29%), Positives = 118/271 (43%), Gaps = 49/271 (18%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F+ F E       +  +R + +K +G L LT    N        G A Y +PI++ D 
Sbjct: 5   FNFDHFEENSKE---LNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDS 61

Query: 81  STSLSSKPNASSFSTCFVFQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTN 139
           +T      N +SF T F F I  P    +   GL F + P P+ P G+    LG+     
Sbjct: 62  TTG-----NVASFETRFSFNITQPYAYPEPADGLTFFMVP-PNSPQGEDGGNLGVFKPPE 115

Query: 140 DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLES 199
                ++ FA+EFDT   +  T D Q  H+GI+VNS+ S K              F LE+
Sbjct: 116 ----GDNAFAVEFDT---FQNTWDPQVPHIGIDVNSIVSSK-----------TLHFQLEN 157

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAF--QETMYV 257
           G      I YD   +++NV +   +            +   LS  +DL   F   E + V
Sbjct: 158 GGVANVVIKYDSPTKILNVVLAFHS----------VGTVYTLSNIVDLKQEFPNSEWVNV 207

Query: 258 GFSASTGRK---VSSHFILGWSFSMNGAAPS 285
           G SA+TG +   V +H I+ WSF+ +    +
Sbjct: 208 GLSATTGYQKNAVETHEIISWSFTSSLQETN 238

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239

 Score =  164 bits (416), Expect = 1e-46
 Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 39/261 (14%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV-----IGHAFYNKPIQMLDKS 81
           F  N F   + +   +  +  + +  +G L+LT   +       +G A Y  P+++   +
Sbjct: 6   FTINNFVPNEAD---LLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNT 62

Query: 82  TSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNSTND 140
           T      + +SFST F F +  PN      GLAF ++P  S  P G    YLG+ N++N 
Sbjct: 63  TG-----SVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN- 116

Query: 141 HKPSNHLFAIEFDTV-NGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLES 199
              SN + A+EFDT      +  D    H+GI+VN ++SIK     +            +
Sbjct: 117 SDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWI-----------N 165

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF 259
           G    A I Y   N+ +  ++           +    +   ++  +DL     E + VGF
Sbjct: 166 GGVAFATITYLAPNKTLIASL----------VYPSNQTTFSVAASVDLKEILPEWVRVGF 215

Query: 260 SASTGR--KVSSHFILGWSFS 278
           SA+TG   +V +H +L WSF+
Sbjct: 216 SAATGYPTEVETHDVLSWSFT 236

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  167 bits (425), Expect = 1e-46
 Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 49/291 (16%)

Query: 368 EVIGTGGFGEVYKG----------VLPTR-MREFAAEIE--SLGRLRHKHLVNLQGWCKR 414
           E IG G FGEV++G          +  +R  R +  E E      LRH++++       +
Sbjct: 48  ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 107

Query: 415 KRD----LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ--- 467
                  L LV DY  +GSL   L       ++ E    +    A+GL +LH E      
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQG 164

Query: 468 --VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT---TNVVGTIGYIAPEL-- 520
              + HRD+KS N+L+  +    + D GLA   D    +      + VGT  Y+APE+  
Sbjct: 165 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 224

Query: 521 ----ARTGKASCSTDVFAYGVLLLEIATGRRPIDS-DHFILV--DWVLEFQHLGQVLDVV 573
                +  ++    D++A G++  EIA         + + L   D V     + ++  VV
Sbjct: 225 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV 284

Query: 574 ---------DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                         S   +  M  +++    C +    AR T  ++ + L+
Sbjct: 285 CEQKLRPNIPNRWQSCEALRVMAKIMR---ECWYANGAARLTALRIKKTLS 332

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  167 bits (424), Expect = 2e-46
 Identities = 60/288 (20%), Positives = 107/288 (37%), Gaps = 43/288 (14%)

Query: 368 EVIGTGGFGEVYKG----------VLPTR-MREFA--AEIESLGRLRHKHLVNLQGWCKR 414
           + IG G +GEV+ G          V  T     +    EI     +RH++++       +
Sbjct: 43  KQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102

Query: 415 KRD----LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE-----W 465
                  L L+ DY  NGSL   L       L  +    +     +GL +LH E      
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQG 159

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH---TTNVVGTIGYIAPEL-- 520
           +  + HRD+KS N+L+  +    + D GLA  F              VGT  Y+ PE+  
Sbjct: 160 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD 219

Query: 521 ----ARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ---HLGQVLDVV 573
                   ++    D++++G++L E+A             + +            + ++V
Sbjct: 220 ESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIV 279

Query: 574 D-----PNLGSSYVVAE-MELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                 P+  + +   E +  + +L   C      +R T  +V + L 
Sbjct: 280 CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243

 Score =  162 bits (410), Expect = 8e-46
 Identities = 62/267 (23%), Positives = 98/267 (36%), Gaps = 38/267 (14%)

Query: 27  FIFNGF--NETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQML 78
           F +  F     K    +     A+ +   GAL+LT    N        G A Y++P+ + 
Sbjct: 6   FTYPDFWSYSLKNGTEITFLGDATRI--PGALQLTKTDANGNPVRSSAGQASYSEPVFLW 63

Query: 79  DKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
           D      S   A+SF T F F +          GLAF ++P  S             + T
Sbjct: 64  D------STGKAASFYTSFTFLL-KNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHET 116

Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                 N + A+EFDT     + +D    H+GI+VNS+ S+             E+    
Sbjct: 117 AADPSKNQVVAVEFDTWI-NKDWNDPPYPHIGIDVNSIVSVATTRW--------ENDDAY 167

Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVG 258
                 A I YD  ++++ V              +      +LS  +DL+    + + +G
Sbjct: 168 GSSIATAHITYDARSKILTVL-----------LSYEHGRDYILSHVVDLAKVLPQKVRIG 216

Query: 259 FSASTGRKVSSHFILGWSFSMNGAAPS 285
           FSA  G      +IL W F       +
Sbjct: 217 FSAGVGY-DEVTYILSWHFFSTLDGTN 242

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240

 Score =  161 bits (409), Expect = 1e-45
 Identities = 73/277 (26%), Positives = 108/277 (38%), Gaps = 53/277 (19%)

Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLD 79
            F F  F+   T+  LI +  A+I    G L+LT    N       +G AFY+ PIQ+  
Sbjct: 5   SFNFPNFH---TDDKLILQGNATIS-SKGQLQLTGVGSNELPRVDSLGRAFYSDPIQI-- 58

Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTN 139
                    N +SF+T F F I   N     +GLAF + P  + P  K + +LGI N+ N
Sbjct: 59  -----KDSNNVASFNTNFTFIIRAKNQSISAYGLAFALVP-VNSPPQKKQEFLGIFNTNN 112

Query: 140 DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLES 199
              P+    A+ F+T            N +  + N +K    E           DF   +
Sbjct: 113 PE-PNARTVAVVFNTFK----------NRIDFDKNFIKPYVNENC---------DFHKYN 152

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF 259
           G+     I YD  N  + V +                 +  +S  + L     E + VGF
Sbjct: 153 GEKTDVQITYDSSNNDLRVFLHFTVS----------QVKCSVSATVHLEKEVDEWVSVGF 202

Query: 260 SASTG---RKVSSHFILGWSFSMNGAAPSLN--LSQI 291
           S ++G       +H +L WSFS        N  L+ I
Sbjct: 203 SPTSGLTEDTTETHDVLSWSFSSKFRNKLSNILLNNI 239

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223

 Score =  156 bits (396), Expect = 4e-44
 Identities = 55/275 (20%), Positives = 98/275 (35%), Gaps = 62/275 (22%)

Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLS 85
            FI + FN+T      +  +  + +  +G L+L+ N+++ +  AFY+ PIQ+ D +T   
Sbjct: 5   SFIIDAFNKTN-----LILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTG-- 57

Query: 86  SKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSN 145
              N +SF T F   I T        GL F + P                          
Sbjct: 58  ---NVASFDTNFTMNIRTHRQANSAVGLDFVLVPVQPE-------------------SKG 95

Query: 146 HLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQA 205
               +EFDT            + + I+VN+                  D     G   + 
Sbjct: 96  DTVTVEFDTFL----------SRISIDVNNNDI----------KSVPWDVHDYDGQNAEV 135

Query: 206 WIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGR 265
            I Y+   ++ +V++                    +S  ++L     + + VGFSA++G 
Sbjct: 136 RITYNSSTKVFSVSLSNP----------STGKSNNVSTTVELEKEVYDWVSVGFSATSGA 185

Query: 266 ---KVSSHFILGWSFSMNGAAPSLNLSQIPSLPIE 297
                 +H +L WSFS          S+  ++ + 
Sbjct: 186 YQWSYETHDVLSWSFSSKFINLKDQKSERSNIVLN 220

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181

 Score =  145 bits (368), Expect = 1e-40
 Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSS 86
           F+   F+  + N  LI +           L LT    N +G A Y+ PI + D+ T    
Sbjct: 6   FLITKFSPDQQN--LIFQGDGYT--TKEKLTLTKAVKNTVGRALYSSPIHIWDRETG--- 58

Query: 87  KPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNH 146
             N ++F T F F I  PNS     G  F ++P           YLG+ NS      +  
Sbjct: 59  --NVANFVTSFTFVINAPNSYNVADGFTFFIAPVD-TKPQTGGGYLGVFNSAEYD-KTTQ 114

Query: 147 LFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAW 206
             A+EFDT         ++  H+GI+VNS+KS+  +            + L++G+     
Sbjct: 115 TVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKS-----------WKLQNGEEANVV 163

Query: 207 IDYDGVNRLVNVTI 220
           I ++    ++ V++
Sbjct: 164 IAFNAATNVLTVSL 177

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  137 bits (347), Expect = 2e-36
 Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 24/204 (11%)

Query: 368 EVIGTGGFGEVYKG------------VLPTRMRE-------FAAEIESLGRLRHKHLVNL 408
           + +G GG   VY               +    RE       F  E+ +  +L H+++V++
Sbjct: 17  DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
               +      LV +YI   +L   +    +  LS +   N    I  G+ + H+     
Sbjct: 77  IDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHD---MR 131

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
           ++HRD+K  N+LID++   ++ DFG+A+      ++ T +V+GT+ Y +PE A+      
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191

Query: 529 STDVFAYGVLLLEIATGRRPIDSD 552
            TD+++ G++L E+  G  P + +
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGE 215

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  136 bits (346), Expect = 4e-36
 Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 24/204 (11%)

Query: 368 EVIGTGGFGEVYKG------------VLPTRMRE-------FAAEIESLGRLRHKHLVNL 408
            ++G GG G+VY+             ++   +            E  + GRL+  H+V +
Sbjct: 40  RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPI 99

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
             + +    L +    I    L ++L       L+  +   I++ I + L   H      
Sbjct: 100 HDFGEIDGQLYVDMRLINGVDLAAML--RRQGPLAPPRAVAIVRQIGSALDAAHA---AG 154

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
             HRDVK  N+L+ AD  A L DFG+A      K++   N VGT+ Y+APE      A+ 
Sbjct: 155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATY 214

Query: 529 STDVFAYGVLLLEIATGRRPIDSD 552
             D++A   +L E  TG  P   D
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGD 238

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  139 bits (353), Expect = 1e-35
 Identities = 68/299 (22%), Positives = 114/299 (38%), Gaps = 50/299 (16%)

Query: 364 FKQSEVIGTGGFGEVYKGVL---------------PTRMREFAAEIESLGRLRHKHLVNL 408
                 +G G +GEVY+GV                   + EF  E   +  ++H +LV L
Sbjct: 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 281

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G C R+    ++ +++  G+L   L +     +S      +   I++ + YL +   + 
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KN 338

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
            IHR++ + N L+  +   ++ DFGL+RL      +        I + APE     K S 
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398

Query: 529 STDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVD-------PNLGSS 580
            +DV+A+GVLL EIAT G  P                 L QV ++++       P     
Sbjct: 399 KSDVWAFGVLLWEIATYGMSP------------YPGIDLSQVYELLEKDYRMERPEGCPE 446

Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSR 639
            V   M         C       RP+  ++ +         +    S  D    E+  R
Sbjct: 447 KVYELM-------RACWQWNPSDRPSFAEIHQAFE-----TMFQESSISDEVEKELGKR 493

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  135 bits (342), Expect = 1e-35
 Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 51/280 (18%)

Query: 368 EVIGTGGFGEVYKG------------VLPTRMRE-------FAAEIESLGRLRHKHLVNL 408
           E++G GG  EV+              VL   +         F  E ++   L H  +V +
Sbjct: 18  EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77

Query: 409 --QGWCKRKRDLL--LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
              G  +     L  +V +Y+   +L  ++  +    ++ ++   +I      L + H+ 
Sbjct: 78  YDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSHQ- 134

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK--ISHTTNVVGTIGYIAPELAR 522
               +IHRDVK  N++I A    ++ DFG+AR        ++ T  V+GT  Y++PE AR
Sbjct: 135 --NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
                  +DV++ G +L E+ TG  P   D  + V     +QH+ +  D + P+     +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV----AYQHVRE--DPIPPSARHEGL 246

Query: 583 VAEME-LVLQLGLLCSHQKAEAR-PTMRQVLRYLNGDELL 620
            A+++ +VL         KA A+ P      RY    E+ 
Sbjct: 247 SADLDAVVL---------KALAKNPEN----RYQTAAEMR 273

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  137 bits (346), Expect = 2e-35
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 61/280 (21%)

Query: 368 EVIGTGGFGEVYKGVL-----------------PTRMREFAAEIESLGRLRHKHLVNLQG 410
           E IG G FGEV+ G L                 P    +F  E   L +  H ++V L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            C +K+ + +V + +  G   + L       L  +    ++   AAG+ YL     +  I
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQMVGDAAAGMEYLE---SKCCI 235

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI-----APELARTGK 525
           HRD+ + N L+      ++ DFG++R    G  + +    G +  +     APE    G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS----GGLRQVPVKWTAPEALNYGR 291

Query: 526 ASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL--GQVLDVVD-------P 575
            S  +DV+++G+LL E  + G  P              + +L   Q  + V+       P
Sbjct: 292 YSSESDVWSFGILLWETFSLGASP--------------YPNLSNQQTREFVEKGGRLPCP 337

Query: 576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            L    V   M         C   +   RP+   + + L 
Sbjct: 338 ELCPDAVFRLM-------EQCWAYEPGQRPSFSTIYQELQ 370

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  136 bits (344), Expect = 2e-35
 Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 22/203 (10%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFA-AEIESLGRLRHKHL 405
           + + + IG G FG+                      + ++ RE +  E+  L  ++H ++
Sbjct: 26  YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V  +   +    L +V DY   G L   +   +  +   +Q  +    I   L ++H+  
Sbjct: 86  VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD-- 143

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
            + ++HRD+KS N+ +  D   +LGDFG+AR+ +          +GT  Y++PE+     
Sbjct: 144 -RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA-CIGTPYYLSPEICENKP 201

Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
            +  +D++A G +L E+ T +  
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHA 224

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  134 bits (340), Expect = 3e-34
 Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 45/270 (16%)

Query: 368 EVIGTGGFGEVYKGVLPTRMR--------------EFAAEIESLGRLRHKHLVNLQGWCK 413
             +G G FGEV+ G      R               F  E + + +LRH+ LV L     
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
            +  + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD
Sbjct: 250 EEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 305

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVF 533
           +++ N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365

Query: 534 AYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVD-------PNLGSSYVVAE 585
           ++G+LL E+ T GR P                   +VLD V+       P      +   
Sbjct: 366 SFGILLTELTTKGRVPYPG------------MVNREVLDQVERGYRMPCPPECPESLHDL 413

Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           M         C  ++ E RPT   +  +L 
Sbjct: 414 M-------CQCWRKEPEERPTFEYLQAFLE 436

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  135 bits (340), Expect = 1e-33
 Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 45/270 (16%)

Query: 368 EVIGTGGFGEVYKGVLPTRMR--------------EFAAEIESLGRLRHKHLVNLQGWCK 413
             +G G FGEV+ G      R               F  E + + +LRH+ LV L     
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
            +  + +V +Y+  GSL   L       L   Q  ++   IA+G+ Y+        +HRD
Sbjct: 333 EEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 388

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVF 533
           +++ N+L+  ++  ++ DFGLARL +  + +        I + APE A  G+ +  +DV+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448

Query: 534 AYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVD-------PNLGSSYVVAE 585
           ++G+LL E+ T GR P                   +VLD V+       P      +   
Sbjct: 449 SFGILLTELTTKGRVPYPG------------MVNREVLDQVERGYRMPCPPECPESLHDL 496

Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           M         C  ++ E RPT   +  +L 
Sbjct: 497 M-------CQCWRKEPEERPTFEYLQAFLE 519

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  127 bits (321), Expect = 6e-33
 Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 50/277 (18%)

Query: 364 FKQSEVIGTGGFGEVYKG------------VLPTRMREFAAEIESLGRLRHKHLV----- 406
           FK+ E+IG+GGFG+V+K              +     +   E+++L +L H ++V     
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72

Query: 407 -----------NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
                      +      + + L +  ++   G+L+  +       L       + + I 
Sbjct: 73  WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
            G+ Y+H    + +I+RD+K  N+ +      ++GDFGL     +      T   GT+ Y
Sbjct: 133 KGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--GKRTRSKGTLRY 187

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP 575
           ++PE   +       D++A G++L E+                    F+      D+ D 
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDT-------------AFETSKFFTDLRDG 234

Query: 576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
            +   +   E  L+ +L L    +K E RP   ++LR
Sbjct: 235 IISDIFDKKEKTLLQKL-L---SKKPEDRPNTSEILR 267

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  126 bits (319), Expect = 1e-32
 Identities = 71/302 (23%), Positives = 118/302 (39%), Gaps = 64/302 (21%)

Query: 368 EVIGTGGFGEVYKGVL---------------PTRMREFAAEIESLGRLRHKHLVNLQGWC 412
             +G G +GEVY+GV                   + EF  E   +  ++H +LV L G C
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78

Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHR 472
            R+    ++ +++  G+L   L +     +S      +   I++ + YL    ++  IHR
Sbjct: 79  TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHR 135

Query: 473 DVKSGNVLIDADMNARLGDFGLARLFD--------HGKISHTTNVVGTIGYIAPELARTG 524
           D+ + N L+  +   ++ DFGL+RL            K          I + APE     
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--------IKWTAPESLAYN 187

Query: 525 KASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQ--HLGQVLDVVDPNLGSSY 581
           K S  +DV+A+GVLL EIAT G  P              +    L QV ++++      Y
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSP--------------YPGIDLSQVYELLE----KDY 229

Query: 582 VVAEMEL----VLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMN 637
            +   E     V +L   C       RP+  ++ +         +    S  D    E+ 
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE-----TMFQESSISDEVEKELG 284

Query: 638 SR 639
            R
Sbjct: 285 KR 286

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  126 bits (318), Expect = 1e-32
 Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 32/222 (14%)

Query: 342 EDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMR------------- 388
           ++WE+      R +         K  E +G G FGEV+ G      +             
Sbjct: 6   DEWEVP-----RET--------LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP 52

Query: 389 -EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
             F AE   + +L+H+ LV L      +  + ++ +Y+ NGSL   L       L+  + 
Sbjct: 53  DAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 111

Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT 507
            ++   IA G+ ++ E   +  IHRD+++ N+L+   ++ ++ DFGLARL +  + +   
Sbjct: 112 LDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168

Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
                I + APE    G  +  +DV+++G+LL EI T GR P
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  125 bits (317), Expect = 1e-32
 Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 49/272 (18%)

Query: 368 EVIGTGGFGEVYKGVLPTRMR--------------EFAAEIESLGRLRHKHLVNLQGWCK 413
           + +G+G FG V  G    +                EF  E +++ +L H  LV   G C 
Sbjct: 14  KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
           ++  + +V +YI NG L + L  +    L   Q   +   +  G+ +L        IHRD
Sbjct: 74  KEYPIYIVTEYISNGCLLNYLRSHGK-GLEPSQLLEMCYDVCEGMAFLE---SHQFIHRD 129

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELARTGKASCST 530
           + + N L+D D+  ++ DFG+ R           + VGT   + + APE+    K S  +
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLD---DQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186

Query: 531 DVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL--GQVLDVVDPNLGSSYVVAEME 587
           DV+A+G+L+ E+ + G+ P              +      +V+  V       + +    
Sbjct: 187 DVWAFGILMWEVFSLGKMP--------------YDLYTNSEVVLKVS----QGHRLYRPH 228

Query: 588 L----VLQLGLLCSHQKAEARPTMRQVLRYLN 615
           L    + Q+   C H+  E RPT +Q+L  + 
Sbjct: 229 LASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  130 bits (328), Expect = 1e-32
 Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 19/200 (9%)

Query: 364 FKQSEVIGTGGFGEVYKGVLP--------------TRMREFAAEIESLGRLRHKHLVNLQ 409
            K  + +G G FGEV+                     +  F AE   +  L+H  LV L 
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 249

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
               ++  + ++ +++  GSL   L  +E       +  +    IA G+ ++ +   +  
Sbjct: 250 AVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNY 305

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+++ N+L+ A +  ++ DFGLAR+ +  + +        I + APE    G  +  
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365

Query: 530 TDVFAYGVLLLEIAT-GRRP 548
           +DV+++G+LL+EI T GR P
Sbjct: 366 SDVWSFGILLMEIVTYGRIP 385

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  126 bits (318), Expect = 1e-32
 Identities = 63/272 (23%), Positives = 116/272 (42%), Gaps = 49/272 (18%)

Query: 368 EVIGTGGFGEVYKGVLPTRMR--------------EFAAEIESLGRLRHKHLVNLQGWCK 413
           + +GTG FG V  G    +                EF  E + +  L H+ LV L G C 
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
           ++R + ++ +Y+ NG L + L +  +     +Q   + K +   + YL     +  +HRD
Sbjct: 90  KQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 145

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELARTGKASCST 530
           + + N L++     ++ DFGL+R          T+ VG+   + +  PE+    K S  +
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLD---DEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202

Query: 531 DVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL--GQVLDVVDPNLGSSYVVAEME 587
           D++A+GVL+ EI + G+ P              ++     +  + +         +    
Sbjct: 203 DIWAFGVLMWEIYSLGKMP--------------YERFTNSETAEHIA----QGLRLYRPH 244

Query: 588 L----VLQLGLLCSHQKAEARPTMRQVLRYLN 615
           L    V  +   C H+KA+ RPT + +L  + 
Sbjct: 245 LASEKVYTIMYSCWHEKADERPTFKILLSNIL 276

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  128 bits (323), Expect = 2e-32
 Identities = 76/318 (23%), Positives = 140/318 (44%), Gaps = 56/318 (17%)

Query: 368 EVIGTGGFGEVYKGVLPTRM--------------------REFAAEIESLGRLRHKHLVN 407
           +V+G G FGEV  G L                        R+F  E   +G+  H +++ 
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L+G   + + +++V +Y+ NGSLDS L  ++    +  Q   +++GIA+G+ YL    + 
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLS---DM 166

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGK 525
             +HRD+ + N+LI++++  ++ DFGL R+ +    +  T   G   I + +PE     K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226

Query: 526 ASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLG--QVLDVVDPNLGSSYV 582
            + ++DV++YG++L E+ + G RP              +  +    V+  VD      Y 
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP--------------YWEMSNQDVIKAVD----EGYR 268

Query: 583 VAEMEL----VLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNS 638
           +         + QL L C  +    RP   Q++  L+      +I N  SL    S    
Sbjct: 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD-----KLIRNPGSLKIITSAAAR 323

Query: 639 RYLEIISTDNITTSQLSS 656
               ++   N+  +   +
Sbjct: 324 PSNLLLDQSNVDITTFRT 341

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  126 bits (319), Expect = 3e-32
 Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 36/229 (15%)

Query: 352 FRYSDLYTATKGF---------KQSEVIGTGGFGEVYKGVLPTRMR-------------- 388
             Y +   A + F            ++IG+G  GEV  G L    +              
Sbjct: 30  HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY 89

Query: 389 ------EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVL 442
                 +F +E   +G+  H +++ L+G   R R  ++V +Y+ NGSLD+ L  ++    
Sbjct: 90  TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QF 148

Query: 443 SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK 502
           +  Q   +++G+ AG+ YL    +   +HRD+ + NVL+D+++  ++ DFGL+R+ +   
Sbjct: 149 TIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205

Query: 503 ISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
            +  T   G   I + APE       S ++DV+++GV++ E+   G RP
Sbjct: 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  126 bits (318), Expect = 3e-32
 Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 39/213 (18%)

Query: 364 FKQSEVIGTGGFGEVYKGV--------------LPTRM----REFA-AEIESLGRLRHKH 404
           F+  + IG G F EVY+                +   M    R     EI+ L +L H +
Sbjct: 34  FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLL---------FDNENFVLSWEQRFNIIKGIA 455
           ++          +L +V +    G L  ++            E  V  +         + 
Sbjct: 94  VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP-ERTVWKY------FVQLC 146

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
           + L ++H    + V+HRD+K  NV I A    +LGD GL R F   K +   ++VGT  Y
Sbjct: 147 SALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTPYY 202

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           ++PE       +  +D+++ G LL E+A  + P
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  125 bits (315), Expect = 3e-32
 Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 25/199 (12%)

Query: 368 EVIGTGGFGEVYKGVLPTRMR--------------EFAAEIESLGRLRHKHLVNLQGWCK 413
           + IG+G FG V+ G    + +              +F  E E + +L H  LV L G C 
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73

Query: 414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
            +  + LV +++ +G L   L      + + E    +   +  G+ YL    E  VIHRD
Sbjct: 74  EQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE---EACVIHRD 129

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELARTGKASCST 530
           + + N L+  +   ++ DFG+ R          T+  GT   + + +PE+    + S  +
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLD---DQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186

Query: 531 DVFAYGVLLLEIAT-GRRP 548
           DV+++GVL+ E+ + G+ P
Sbjct: 187 DVWSFGVLMWEVFSEGKIP 205

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  126 bits (318), Expect = 4e-32
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 32/206 (15%)

Query: 368 EVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHKHLV 406
           +V+G+G FG VYKG+                      P   +E   E   +  + + H+ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G C     + L+   +P G L   + ++++  +  +   N    IA G+ YL +   
Sbjct: 81  RLLGICLTST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLED--- 135

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELART 523
           + ++HRD+ + NVL+    + ++ DFGLA+L    +  +     G    I ++A E    
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWMALESILH 193

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRP 548
              +  +DV++YGV + E+ T G +P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP 219

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  125 bits (316), Expect = 7e-32
 Identities = 73/307 (23%), Positives = 143/307 (46%), Gaps = 60/307 (19%)

Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
             + +VIG G FGEVYKG+L                       +  +F  E   +G+  H
Sbjct: 46  VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            +++ L+G   + + ++++ +Y+ NG+LD  L + +    S  Q   +++GIAAG+ YL 
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYLA 164

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGT---IGYIAP 518
                  +HRD+ + N+L+++++  ++ DFGL+R L D  + ++TT+  G    I + AP
Sbjct: 165 ---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS--GGKIPIRWTAP 219

Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLG--QVLDVVDP 575
           E     K + ++DV+++G+++ E+ T G RP              +  L   +V+  ++ 
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERP--------------YWELSNHEVMKAIN- 264

Query: 576 NLGSSYVVAEMEL----VLQLGLLCSHQKAEARPTMRQVLRYLN----GDELLPIIDNWS 627
                + +         + QL + C  Q+   RP    ++  L+      + L  + ++ 
Sbjct: 265 ---DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFD 321

Query: 628 SLDSQRS 634
              S R 
Sbjct: 322 PRVSIRL 328

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  124 bits (313), Expect = 1e-31
 Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 42/238 (17%)

Query: 335 IAQFEILED-WELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL---------- 383
           +A  EI      LD         L    K       +G+G FG V KG            
Sbjct: 1   MALEEIRPKEVYLD------RKLLTLEDK------ELGSGNFGTVKKGYYQMKKVVKTVA 48

Query: 384 ----------PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSL 433
                     P    E  AE   + +L + ++V + G C+ +   +LV +    G L+  
Sbjct: 49  VKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKY 107

Query: 434 LFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG 493
           L  N +  +  +    ++  ++ G+ YL  E E   +HRD+ + NVL+     A++ DFG
Sbjct: 108 LQQNRH--VKDKNIIELVHQVSMGMKYL--E-ESNFVHRDLAARNVLLVTQHYAKISDFG 162

Query: 494 LARLFDHGKISHTTNVVGT--IGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           L++     +  +     G   + + APE     K S  +DV+++GVL+ E  + G++P
Sbjct: 163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  123 bits (311), Expect = 2e-31
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 27/201 (13%)

Query: 370 IGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRLRHKHLVNLQG 410
           +G G FG V +GV   R                     E   E + + +L + ++V L G
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
            C+ +  L+LV +    G L   L       +       ++  ++ G+ YL E   +  +
Sbjct: 78  VCQAEA-LMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEE---KNFV 132

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGKASC 528
           HRD+ + NVL+     A++ DFGL++        +T    G   + + APE     K S 
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192

Query: 529 STDVFAYGVLLLEIAT-GRRP 548
            +DV++YGV + E  + G++P
Sbjct: 193 RSDVWSYGVTMWEALSYGQKP 213

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  129 bits (326), Expect = 2e-31
 Identities = 48/241 (19%), Positives = 86/241 (35%), Gaps = 44/241 (18%)

Query: 343 DWELDCPH-RFRYSDLYTATKG------FKQSEVIGTGGFGEVY--------------KG 381
             E  CP+    YS L     G      ++    I  GG G +Y              KG
Sbjct: 54  ASEGWCPYCGSPYSFLPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKG 113

Query: 382 VLPTRMREFAA----EIESLGRLRHKHLVNL--QGWCKRKRDLLLVY---DYIPNGSLDS 432
           ++ +   E  A    E + L  + H  +V +        +    + Y   +Y+   SL  
Sbjct: 114 LVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR 173

Query: 433 LLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF 492
                    L   +    +  I   L YLH      +++ D+K  N+++  +   +L D 
Sbjct: 174 SKGQK----LPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDL 225

Query: 493 GLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           G        +I+    + GT G+ APE+ R    + +TD++  G  L  +       +  
Sbjct: 226 GAVS-----RINSFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALTLDLPTRNGR 279

Query: 553 H 553
           +
Sbjct: 280 Y 280

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133

 Score =  118 bits (296), Expect = 2e-31
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 23/141 (16%)

Query: 145 NHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQ 204
           +++ A+EFDT     +  D    H+GI+VNS++S       +            +G    
Sbjct: 1   SNVVAVEFDTYLN-PDYGDPNYIHIGIDVNSIRSKVTAKWDWQ-----------NGKIAT 48

Query: 205 AWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTG 264
           A I Y+ V++ ++VT      K              LS  ++L     E + VG SASTG
Sbjct: 49  AHISYNSVSKRLSVTSYYAGSKP-----------ATLSYDIELHTVLPEWVRVGLSASTG 97

Query: 265 RKVSSHFILGWSFSMNGAAPS 285
           +    + +  WSF+ +     
Sbjct: 98  QDKERNTVHSWSFTSSLWTNV 118

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  122 bits (309), Expect = 2e-31
 Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 27/198 (13%)

Query: 368 EVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRLRHKHLVNLQGWC-KR 414
           + IG G FG+V  G                  + F AE   + +LRH +LV L G   + 
Sbjct: 27  QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86

Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           K  L +V +Y+  GSL   L      VL  +        +   + YL        +HRD+
Sbjct: 87  KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDL 143

Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELARTGKASCSTD 531
            + NVL+  D  A++ DFGL +         ++        + + APE  R  K S  +D
Sbjct: 144 AARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFSTKSD 196

Query: 532 VFAYGVLLLEIAT-GRRP 548
           V+++G+LL EI + GR P
Sbjct: 197 VWSFGILLWEIYSFGRVP 214

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  126 bits (319), Expect = 2e-31
 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 21/195 (10%)

Query: 368 EVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRLRHKHLVNLQGWC-KR 414
           + IG G FG+V  G                  + F AE   + +LRH +LV L G   + 
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258

Query: 415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDV 474
           K  L +V +Y+  GSL   L      VL  +        +   + YL        +HRD+
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDL 315

Query: 475 KSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFA 534
            + NVL+  D  A++ DFGL +  +      T  +   + + APE  R  K S  +DV++
Sbjct: 316 AARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWS 371

Query: 535 YGVLLLEIAT-GRRP 548
           +G+LL EI + GR P
Sbjct: 372 FGILLWEIYSFGRVP 386

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  122 bits (308), Expect = 3e-31
 Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 39/275 (14%)

Query: 364 FKQSEVIGTGGFGEVYK-----------------GVLPTRMREFA-AEIESLGRLRHKHL 405
           ++    IGTG +G   K                 G +    ++   +E+  L  L+H ++
Sbjct: 8   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67

Query: 406 VNLQGW--CKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYL 461
           V        +    L +V +Y   G L S++     E   L  E    ++  +   L   
Sbjct: 68  VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127

Query: 462 HE--EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           H   +    V+HRD+K  NV +D   N +LGDFGLAR+ +H   S     VGT  Y++PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT-SFAKTFVGTPYYMSPE 186

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPID-SDHFILVDWVLEFQHLGQVLDVVDPNLG 578
                  +  +D+++ G LL E+     P        L   + E    G+        + 
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE----GKF-----RRIP 237

Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
             Y     E++ +      + K   RP++ ++L  
Sbjct: 238 YRYSDELNEIITR----MLNLKDYHRPSVEEILEN 268

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  122 bits (307), Expect = 5e-31
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 30/208 (14%)

Query: 364 FKQSEVIGTGGFGEVYKG------------------VLPTRMREFAAEIESLGRLRHKHL 405
            K    IG G F  VYKG                  +  +  + F  E E L  L+H ++
Sbjct: 28  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 87

Query: 406 VNLQG----WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           V          K K+ ++LV + + +G+L + L      V+  +   +  + I  GL +L
Sbjct: 88  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFL 145

Query: 462 HEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           H      +IHRD+K  N+ I     + ++GD GLA L      S    V+GT  ++APE+
Sbjct: 146 HTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAPEM 201

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRP 548
                   S DV+A+G+ +LE+AT   P
Sbjct: 202 YEEK-YDESVDVYAFGMCMLEMATSEYP 228

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  121 bits (306), Expect = 7e-31
 Identities = 50/228 (21%), Positives = 91/228 (39%), Gaps = 39/228 (17%)

Query: 342 EDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL------------------ 383
            D+E+      R           +    IG G FG+V++G+                   
Sbjct: 8   RDYEIQ-----RER--------IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC 54

Query: 384 --PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFV 441
              +   +F  E  ++ +  H H+V L G       + ++ +    G L S L   +   
Sbjct: 55  TSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKY-S 112

Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG 501
           L           ++  L YL     +  +HRD+ + NVL+ ++   +LGDFGL+R  +  
Sbjct: 113 LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169

Query: 502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
                +     I ++APE     + + ++DV+ +GV + EI   G +P
Sbjct: 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  122 bits (307), Expect = 9e-31
 Identities = 65/309 (21%), Positives = 118/309 (38%), Gaps = 53/309 (17%)

Query: 368 EVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHLVN 407
             +G G FG V                         P + R+F  EI+ L  L    +V 
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88

Query: 408 LQGWCKRKRD--LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
            +G         L LV +Y+P+G L   L  +    L   +       I  G+ YL    
Sbjct: 89  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLG--- 144

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELART 523
            +  +HRD+ + N+L++++ + ++ DFGLA+L    K  +     G   I + APE    
Sbjct: 145 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRP--IDSDHFILVDWVLEFQHLGQVLDVVD------ 574
              S  +DV+++GV+L E+ T   +     ++   ++    +   L ++L++++      
Sbjct: 205 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLP 264

Query: 575 -PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQR 633
            P    + V   M        LC     + RP+   +   L+          WS      
Sbjct: 265 APPACPAEVHELM-------KLCWAPSPQDRPSFSALGPQLD--------MLWSGSRGCE 309

Query: 634 SEMNSRYLE 642
           +   + + E
Sbjct: 310 THAFTAHPE 318

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  121 bits (306), Expect = 1e-30
 Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 48/286 (16%)

Query: 365 KQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHK 403
           K+   +G G FG+V                          P     +  EI+ L  L H+
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93

Query: 404 HLVNLQGWCKRKRD--LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H++  +G C+      L LV +Y+P GSL   L  +    +   Q     + I  G+ YL
Sbjct: 94  HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYL 150

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPE 519
           H    Q  IHRD+ + NVL+D D   ++GDFGLA+    G   +     G   + + APE
Sbjct: 151 HA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 207

Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQ--HLGQVLDVVD-- 574
             +  K   ++DV+++GV L E+ T            L    +      + ++ ++++  
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267

Query: 575 -----PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                P+   + V   M         C   +A  RPT   ++  L 
Sbjct: 268 ERLPRPDKCPAEVYHLM-------KNCWETEASFRPTFENLIPILK 306

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  121 bits (305), Expect = 1e-30
 Identities = 50/204 (24%), Positives = 80/204 (39%), Gaps = 27/204 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA------------------AEIESLGRL-RHKH 404
           F++   +G G +GEV+K       R +A                  AE+ S  ++ +H  
Sbjct: 59  FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
            V L+   +    L L  +     SL     +     L   Q +  ++     L +LH  
Sbjct: 119 CVRLEQAWEEGGILYLQTELC-GPSLQQHC-EAWGASLPEAQVWGYLRDTLLALAHLHS- 175

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
             Q ++H DVK  N+ +      +LGDFGL                G   Y+APEL + G
Sbjct: 176 --QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV--QEGDPRYMAPELLQ-G 230

Query: 525 KASCSTDVFAYGVLLLEIATGRRP 548
               + DVF+ G+ +LE+A     
Sbjct: 231 SYGTAADVFSLGLTILEVACNMEL 254

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  120 bits (304), Expect = 1e-30
 Identities = 62/283 (21%), Positives = 114/283 (40%), Gaps = 46/283 (16%)

Query: 368 EVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHLVN 407
           + +G G FG V                            +R+F  EIE L  L+H ++V 
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75

Query: 408 LQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
            +G C    +R+L L+ +Y+P GSL   L  ++   +   +       I  G+ YL    
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGT-- 132

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELART 523
            +  IHRD+ + N+L++ +   ++GDFGL ++    K        G   I + APE    
Sbjct: 133 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG----QVLDVVD----- 574
            K S ++DV+++GV+L E+ T      S     +  +   +        +++++      
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251

Query: 575 --PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
             P+     +   M         C +     RP+ R +   ++
Sbjct: 252 PRPDGCPDEIYMIM-------TECWNNNVNQRPSFRDLALRVD 287

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  121 bits (306), Expect = 2e-30
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 32/206 (15%)

Query: 368 EVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHKHLV 406
           +V+G+G FG VYKG+                      P   +E   E   +  + + H+ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G C     + L+   +P G L   + ++++  +  +   N    IA G+ YL +   
Sbjct: 81  RLLGICLTST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLED--- 135

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELART 523
           + ++HRD+ + NVL+    + ++ DFGLA+L    +  +     G    I ++A E    
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWMALESILH 193

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRP 548
              +  +DV++YGV + E+ T G +P
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKP 219

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  120 bits (304), Expect = 2e-30
 Identities = 60/278 (21%), Positives = 110/278 (39%), Gaps = 36/278 (12%)

Query: 368 EVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHKHLV 406
             +G G FG+V                             + +   EIE L  L H+++V
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86

Query: 407 NLQGWCKRKRD--LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
             +G C       + L+ +++P+GSL   L  N+N  ++ +Q+      I  G+ YL   
Sbjct: 87  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGS- 144

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELAR 522
             +  +HRD+ + NVL++++   ++GDFGL +  +  K  +T        + + APE   
Sbjct: 145 --RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLM 202

Query: 523 TGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY 581
             K   ++DV+++GV L E+ T            L         +  V  +V+  L    
Sbjct: 203 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMT-VTRLVN-TLKEGK 260

Query: 582 VVAEMEL----VLQLGLLCSHQKAEARPTMRQVLRYLN 615
            +         V QL   C   +   R + + ++    
Sbjct: 261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  120 bits (302), Expect = 3e-30
 Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 30/210 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVL----------------------PTRMREFAAEIESLGRLR 401
            +  E +G G FG V +G                        P  M +F  E+ ++  L 
Sbjct: 20  LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H++L+ L G       + +V +  P GSL   L  ++               +A G+ YL
Sbjct: 80  HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYL 137

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPE 519
                +  IHRD+ + N+L+      ++GDFGL R        +           + APE
Sbjct: 138 ES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194

Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
             +T   S ++D + +GV L E+ T G+ P
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  119 bits (300), Expect = 4e-30
 Identities = 59/283 (20%), Positives = 107/283 (37%), Gaps = 66/283 (23%)

Query: 368 EVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHLVN 407
            ++G G FGEVY+GV                          +F +E   +  L H H+V 
Sbjct: 18  RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L G  + +    ++ +  P G L   L  N+N  L           I   + YL      
Sbjct: 78  LIGIIEEEP-TWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLES---I 132

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFD--------HGKISHTTNVVGTIGYIAPE 519
             +HRD+   N+L+ +    +LGDFGL+R  +          ++         I +++PE
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--------IKWMSPE 184

Query: 520 LARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL--GQVLDVVDPN 576
                + + ++DV+ + V + EI + G++P              F  L    V+ V++  
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQP--------------FFWLENKDVIGVLE-- 228

Query: 577 LGSSYVVAEMEL----VLQLGLLCSHQKAEARPTMRQVLRYLN 615
                 + + +L    +  L   C       RP   +++  L+
Sbjct: 229 --KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  119 bits (300), Expect = 4e-30
 Identities = 57/317 (17%), Positives = 103/317 (32%), Gaps = 65/317 (20%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGRLRHKHLV 406
           F+  + +G GGFG V++                         +   E+++L +L H  +V
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66

Query: 407 ---------NLQGWCKRKRDLLLVY---DYIPNGSLDSLLFDNENFVLSWEQR-FNIIKG 453
                    N     +     + +Y         +L   +               +I   
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV---- 509
           IA  + +LH    + ++HRD+K  N+    D   ++GDFGL    D  +   T       
Sbjct: 127 IAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183

Query: 510 -------VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE 562
                  VGT  Y++PE       S   D+F+ G++L E+     P  +           
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-------ER 233

Query: 563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPI 622
            + L  V ++  P L +     E  +V  + L         RP    ++          +
Sbjct: 234 VRTLTDVRNLKFPPLFTQKYPCEYVMVQDM-L---SPSPMERPEAINIIEN-------AV 282

Query: 623 IDNWSSLDSQRSEMNSR 639
            ++            SR
Sbjct: 283 FEDLDFPGKTVLRQRSR 299

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  119 bits (301), Expect = 7e-30
 Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 46/283 (16%)

Query: 368 EVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHLVN 407
           + +G G FG V                            +R+F  EIE L  L+H ++V 
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106

Query: 408 LQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
            +G C    +R+L L+ +Y+P GSL   L  ++   +   +       I  G+ YL    
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGT-- 163

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELART 523
            +  IHRD+ + N+L++ +   ++GDFGL ++    K  +     G   I + APE    
Sbjct: 164 -KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 222

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG----QVLDVVD----- 574
            K S ++DV+++GV+L E+ T      S     +  +   +        +++++      
Sbjct: 223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 282

Query: 575 --PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
             P+     +   M         C +     RP+ R +   ++
Sbjct: 283 PRPDGCPDEIYMIM-------TECWNNNVNQRPSFRDLALRVD 318

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  119 bits (300), Expect = 9e-30
 Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 32/206 (15%)

Query: 368 EVIGTGGFGEVYKGVL-------------------PTRM--REFAAEIESLGRLRHKHLV 406
           +V+G+G FG V+KGV                      R   +     + ++G L H H+V
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L G C     L LV  Y+P GSL   +  +    L  +   N    IA G+ YL E   
Sbjct: 79  RLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYLEE--- 133

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPELART 523
             ++HR++ + NVL+ +    ++ DFG+A L                  I ++A E    
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD--DKQLLYSEAKTPIKWMALESIHF 191

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRP 548
           GK +  +DV++YGV + E+ T G  P
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEP 217

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  123 bits (310), Expect = 1e-29
 Identities = 63/304 (20%), Positives = 116/304 (38%), Gaps = 65/304 (21%)

Query: 369 VIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRLRHKHLVNLQ 409
            +G G FG V +GV   R                     E   E + + +L + ++V L 
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
           G C+ +  L+LV +    G L   L       +       ++  ++ G+ YL E   +  
Sbjct: 403 GVCQAEA-LMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEE---KNF 457

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT--IGYIAPELARTGKAS 527
           +HR++ + NVL+     A++ DFGL++        +T    G   + + APE     K S
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517

Query: 528 CSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLG--QVLDVVD-------PNL 577
             +DV++YGV + E  + G++P              ++ +   +V+  ++       P  
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKP--------------YKKMKGPEVMAFIEQGKRMECPPE 563

Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMN 637
               + A M         C   K E RP    V + +           + SL S+    +
Sbjct: 564 CPPELYALM-------SDCWIYKWEDRPDFLTVEQRMR--------ACYYSLASKVEGGS 608

Query: 638 SRYL 641
           +  +
Sbjct: 609 ALEV 612

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  118 bits (297), Expect = 3e-29
 Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 37/209 (17%)

Query: 364 FKQSEVIGTGGFGEVYKGV--------------LPTRMREFAAEIESLGRLRHKHLVNLQ 409
                 +G G FGEV++                L     E   E+ +   L    +V L 
Sbjct: 60  MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE---ELVACAGLSSPRIVPLY 116

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLL-----FDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           G  +    + +  + +  GSL  L+        E+  L        +     GL YLH  
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRAL------YYLGQALEGLEYLH-- 167

Query: 465 WEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDHGKISHTTN----VVGTIGYIAPE 519
             + ++H DVK+ NVL+ +D   A L DFG A       +  +      + GT  ++APE
Sbjct: 168 -TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRP 548
           +          D+++   ++L +  G  P
Sbjct: 227 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  122 bits (307), Expect = 4e-29
 Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 26/202 (12%)

Query: 368 EVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHLVN 407
             IG G FG+V++G+                      +   +F  E  ++ +  H H+V 
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L G       + ++ +    G L S L   +   L           ++  L YL     +
Sbjct: 456 LIGVITENP-VWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLES---K 510

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
             +HRD+ + NVL+ ++   +LGDFGL+R  +       +     I ++APE     + +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570

Query: 528 CSTDVFAYGVLLLEIAT-GRRP 548
            ++DV+ +GV + EI   G +P
Sbjct: 571 SASDVWMFGVCMWEILMHGVKP 592

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  116 bits (292), Expect = 6e-29
 Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 29/206 (14%)

Query: 368 EVIGTGGFGEVYKGVLPTR--------------------MREFAAEIESLGRLRHKHLVN 407
           EVIG G FG VY G L                       + +F  E   +    H ++++
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90

Query: 408 LQGWCKRKRD-LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L G C R     L+V  Y+ +G L + + +  +   + +        +A G+ YL     
Sbjct: 91  LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLAS--- 146

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLF---DHGKISHTTNVVGTIGYIAPELART 523
           +  +HRD+ + N ++D     ++ DFGLAR     ++  + + T     + ++A E  +T
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRP 548
            K +  +DV+++GVLL E+ T G  P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPP 232

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  115 bits (291), Expect = 7e-29
 Identities = 64/292 (21%), Positives = 111/292 (38%), Gaps = 70/292 (23%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-----------------------PTRMREFAAEIESLGRL 400
              +E +G G F +++KGV                              F      + +L
Sbjct: 10  LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69

Query: 401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
            HKHLV   G C    + +LV +++  GSLD+ L  N+N  ++   +  + K +AA + +
Sbjct: 70  SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN-CINILWKLEVAKQLAAAMHF 128

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNAR--------LGDFGLARLF---DHGKISHTTNV 509
           L    E  +IH +V + N+L+  + + +        L D G++      D  +       
Sbjct: 129 LE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER----- 180

Query: 510 VGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW----VLEF 563
              I ++ PE     K  + +TD +++G  L EI + G +P       L        L+F
Sbjct: 181 ---IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP-------LSALDSQRKLQF 230

Query: 564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                 L    P                L   C   + + RP+ R ++R LN
Sbjct: 231 YEDRHQLP--APKAAELA---------NLINNCMDYEPDHRPSFRAIIRDLN 271

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  120 bits (302), Expect = 1e-28
 Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 49/286 (17%)

Query: 368 EVIGTGGFGEVYKGV----------------LPTRMRE-FAAEIESLGRLRHKHLVNL-- 408
           E +GTGGFG V + +                L  + RE +  EI+ + +L H ++V+   
Sbjct: 20  ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79

Query: 409 ----QGWCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHE 463
                         LL  +Y   G L   L   EN   L       ++  I++ L YLHE
Sbjct: 80  VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139

Query: 464 EWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
                +IHRD+K  N+++      +  ++ D G A+  D G++      VGT+ Y+APEL
Sbjct: 140 ---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE--FVGTLQYLAPEL 194

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDSD--------------HFILVDWVLEFQHL 566
               K + + D +++G L  E  TG RP   +              +  +V +      +
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAV 254

Query: 567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
                +  PN  S  +  ++E  LQ  L+   ++   R T  Q   
Sbjct: 255 KFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQ---RGTDPQNPN 297

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  115 bits (290), Expect = 2e-28
 Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 37/222 (16%)

Query: 359 TATKGFKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGRLR 401
           T+   +  S+++G G    V++G                      +     E E L +L 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 402 HKHLVNLQG--WCKRKRDLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGL 458
           HK++V L         R  +L+ ++ P GSL ++L +  N + L   +   +++ +  G+
Sbjct: 66  HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125

Query: 459 LYLHEEWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
            +L    E  ++HR++K GN++     D     +L DFG AR  +  +   +  + GT  
Sbjct: 126 NHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEE 180

Query: 515 YIAPELARTGKA--------SCSTDVFAYGVLLLEIATGRRP 548
           Y+ P++                + D+++ GV     ATG  P
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  114 bits (288), Expect = 2e-28
 Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 37/215 (17%)

Query: 364 FKQSEVIGTGGFGEVYKG------------VLP------TRMRE-FAAEIESLGRLRHKH 404
           + +   +G GGF + ++             ++P         RE  + EI     L H+H
Sbjct: 17  YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 76

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGL 458
           +V   G+ +    + +V +     SL     +    +    +          ++ I  G 
Sbjct: 77  VVGFHGFFEDNDFVFVVLELCRRRSL----LE----LHKRRKALTEPEARYYLRQIVLGC 128

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            YLH      VIHRD+K GN+ ++ D+  ++GDFGLA   ++        + GT  YIAP
Sbjct: 129 QYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAP 184

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           E+      S   DV++ G ++  +  G+ P ++  
Sbjct: 185 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  116 bits (291), Expect = 3e-28
 Identities = 66/304 (21%), Positives = 125/304 (41%), Gaps = 54/304 (17%)

Query: 368 EVIGTGGFGEVYKGVLPTR--------------------MREFAAEIESLGRLRHKHLVN 407
           EVIG G FG VY G L                       + +F  E   +    H ++++
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154

Query: 408 LQGWCKRKRD-LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
           L G C R     L+V  Y+ +G L + + +  +   + +        +A G+ +L     
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLAS--- 210

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLF---DHGKISHTTNVVGTIGYIAPELART 523
           +  +HRD+ + N ++D     ++ DFGLAR     +   + + T     + ++A E  +T
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRP---IDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
            K +  +DV+++GVLL E+ T G  P   +++        +  +   G+ L    P    
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD------ITVYLLQGRRLL--QPEYCP 322

Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSR 639
             +   M       L C H KAE RP+  +++  +    +       + +      +N+ 
Sbjct: 323 DPLYEVM-------LKCWHPKAEMRPSFSELVSRI--SAIFS-----TFIGEHYVHVNAT 368

Query: 640 YLEI 643
           Y+ +
Sbjct: 369 YVNV 372

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  115 bits (289), Expect = 3e-28
 Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 37/215 (17%)

Query: 364 FKQSEVIGTGGFGEVYKG------------VLP------TRMRE-FAAEIESLGRLRHKH 404
           + +   +G GGF + ++             ++P         RE  + EI     L H+H
Sbjct: 43  YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 102

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGL 458
           +V   G+ +    + +V +     SL     +    +    +          ++ I  G 
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSL----LE----LHKRRKALTEPEARYYLRQIVLGC 154

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            YLH      VIHRD+K GN+ ++ D+  ++GDFGLA   ++        + GT  YIAP
Sbjct: 155 QYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAP 210

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           E+      S   DV++ G ++  +  G+ P ++  
Sbjct: 211 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  113 bits (286), Expect = 6e-28
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 50/221 (22%)

Query: 368 EVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRL-RHKHLVN 407
           +VIG G FG+V K  +                       R+FA E+E L +L  H +++N
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLL--------------FDNENFVLSWEQRFNIIKG 453
           L G C+ +  L L  +Y P+G+L   L               ++    LS +Q  +    
Sbjct: 91  LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           +A G+ YL    ++  IHRD+ + N+L+  +  A++ DFGL+R  +         V  T+
Sbjct: 151 VARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKTM 200

Query: 514 GYI-----APELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           G +     A E       + ++DV++YGVLL EI + G  P
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  113 bits (284), Expect = 1e-27
 Identities = 75/344 (21%), Positives = 128/344 (37%), Gaps = 74/344 (21%)

Query: 332 YRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL-------- 383
           Y   A   + ++WE+    +   S              +G G FG VY+GV         
Sbjct: 8   YFSAADVYVPDEWEVA-REKITMS------------RELGQGSFGMVYEGVAKGVVKDEP 54

Query: 384 PTR--------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS 429
            TR                EF  E   +      H+V L G   + +  L++ + +  G 
Sbjct: 55  ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 114

Query: 430 LDSLL--------FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI 481
           L S L         +      S  +   +   IA G+ YL+       +HRD+ + N ++
Sbjct: 115 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMV 171

Query: 482 DADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYI-----APELARTGKASCSTDVFAY 535
             D   ++GDFG+ R      I  T     G  G +     +PE  + G  +  +DV+++
Sbjct: 172 AEDFTVKIGDFGMTR-----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226

Query: 536 GVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL 594
           GV+L EIAT   +P      +  + VL F   G +LD   P+     +   M        
Sbjct: 227 GVVLWEIATLAEQPYQG---LSNEQVLRFVMEGGLLDK--PDNCPDMLFELM-------R 274

Query: 595 LCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNS 638
           +C     + RP+  +++  +   E +     +  +    SE N 
Sbjct: 275 MCWQYNPKMRPSFLEIISSI--KEEME--PGFREVSFYYSEENK 314

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  112 bits (283), Expect = 1e-27
 Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 29/209 (13%)

Query: 365 KQSEVIGTGGFGEVYKGVLPTR--------------------MREFAAEIESLGRLRHKH 404
               VIG G FG VY G    +                    +  F  E   +  L H +
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83

Query: 405 LVNLQGWCKRKRD-LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++ L G          ++  Y+ +G L   +   +    + +   +    +A G+ YL E
Sbjct: 84  VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR-NPTVKDLISFGLQVARGMEYLAE 142

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT---IGYIAPEL 520
              Q  +HRD+ + N ++D     ++ DFGLAR     +             + + A E 
Sbjct: 143 ---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199

Query: 521 ARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
            +T + +  +DV+++GVLL E+ T G  P
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPP 228

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  112 bits (282), Expect = 1e-27
 Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 46/235 (19%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNL 408
           F++  V+G G FG+V K       R +A               +E+  L  L H+++V  
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67

Query: 409 -------------QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
                            K+K  L +  +Y  NG+L  L+  +EN     ++ + + + I 
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI-HSENLNQQRDEYWRLFRQIL 126

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH-------------GK 502
             L Y+H    Q +IHRD+K  N+ ID   N ++GDFGLA+                 G 
Sbjct: 127 EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183

Query: 503 ISHTTNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
             + T+ +GT  Y+A E L  TG  +   D+++ G++  E+            IL
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL 238

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  112 bits (282), Expect = 2e-27
 Identities = 44/222 (19%), Positives = 74/222 (33%), Gaps = 44/222 (19%)

Query: 364 FKQSEVIGTGGFGEVY-------------KGVLPTRMREFAA---EIESLGRLRHKHLVN 407
           +   + +G GGF  V              K +L    ++      E +      H +++ 
Sbjct: 31  YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90

Query: 408 LQGWCKRKRD----LLLVYDYIPNGSLDSLLFDNENFVLSWEQRF------NIIKGIAAG 457
           L  +C R+R       L+  +   G+L    ++    +              ++ GI  G
Sbjct: 91  LVAYCLRERGAKHEAWLLLPFFKRGTL----WNEIERLKDKGNFLTEDQILWLLLGICRG 146

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT--------NV 509
           L  +H    +   HRD+K  N+L+  +    L D G                        
Sbjct: 147 LEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203

Query: 510 VGTIGYIAPEL---ARTGKASCSTDVFAYGVLLLEIATGRRP 548
             TI Y APEL            TDV++ G +L  +  G  P
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  111 bits (279), Expect = 2e-27
 Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 39/214 (18%)

Query: 364 FKQSEVIGTGGFGEVY------------------KGVLPTRMRE-FAAEIESLGRLRHKH 404
           F+    +G G FG VY                    +    +      E+E    LRH +
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGL 458
           ++ L G+      + L+ +Y P G++    +      L    +F+       I  +A  L
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLGTV----YR----ELQKLSKFDEQRTATYITELANAL 122

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            Y H    + VIHRD+K  N+L+ +    ++ DFG +      +   T  + GT+ Y+ P
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--RTD-LCGTLDYLPP 176

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           E+          D+++ GVL  E   G+ P +++
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  113 bits (285), Expect = 2e-27
 Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 37/217 (17%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGRLRHKHLV 406
           +  S+++G G    V++G                      +     E E L +L HK++V
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70

Query: 407 NLQGW--CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGLLYLHE 463
            L         R  +L+ ++ P GSL ++L +  N     E  F  +++ +  G+ +L E
Sbjct: 71  KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130

Query: 464 EWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
                ++HR++K GN++     D     +L DFG AR  +  +   +  + GT  Y+ P+
Sbjct: 131 ---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPD 185

Query: 520 L--------ARTGKASCSTDVFAYGVLLLEIATGRRP 548
           +            K   + D+++ GV     ATG  P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  111 bits (279), Expect = 2e-27
 Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 24/209 (11%)

Query: 364 FKQSEVIGTGGFGEVYKG------------------VLPTRMRE-FAAEIESLGRLRHKH 404
           FK   ++G G F  VY+                   +    M +    E++   +L+H  
Sbjct: 13  FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           ++ L  + +    + LV +   NG ++  L +        E R   +  I  G+LYLH  
Sbjct: 73  ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH-FMHQIITGMLYLHS- 130

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               ++HRD+   N+L+  +MN ++ DFGLA         H T + GT  YI+PE+A   
Sbjct: 131 --HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRS 187

Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDH 553
                +DV++ G +   +  GR P D+D 
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDT 216

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  111 bits (279), Expect = 3e-27
 Identities = 69/294 (23%), Positives = 113/294 (38%), Gaps = 69/294 (23%)

Query: 368 EVIGTGGFGEVYKGVLPTRM----------------------REFAAEIESLGRLRHKHL 405
           E +G   FG+VYKG L                           EF  E     RL+H ++
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--------------ENFVLSWEQRFNII 451
           V L G   + + L +++ Y  +G L   L                     L      +++
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134

Query: 452 KGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVG 511
             IAAG+ YL       V+H+D+ + NVL+   +N ++ D GL R       +     + 
Sbjct: 135 AQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY----AADYYKLL 187

Query: 512 TIGYI-----APELARTGKASCSTDVFAYGVLLLEIAT-GRRP----IDSDHFILVDWVL 561
               +     APE    GK S  +D+++YGV+L E+ + G +P     + D       V+
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD-------VV 240

Query: 562 EFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           E     QVL    P+   ++V A M       + C ++    RP  + +   L 
Sbjct: 241 EMIRNRQVLPC--PDDCPAWVYALM-------IECWNEFPSRRPRFKDIHSRLR 285

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  112 bits (282), Expect = 3e-27
 Identities = 67/288 (23%), Positives = 115/288 (39%), Gaps = 61/288 (21%)

Query: 368 EVIGTGGFGEVYKGVLPTR---------------------MREFAAEIESLGRLRHKHLV 406
             +G G FG+V+                             ++F  E E L  L+H+H+V
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLL-------------FDNENFVLSWEQRFNIIKG 453
              G C   R LL+V++Y+ +G L+  L              D     L   Q   +   
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           +AAG++YL        +HRD+ + N L+   +  ++GDFG++R             VG  
Sbjct: 167 VAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR----VGGR 219

Query: 514 GYI-----APELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW-VLEFQHL 566
             +      PE     K +  +DV+++GV+L EI T G++P     + L +   ++    
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP----WYQLSNTEAIDCITQ 275

Query: 567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           G+ L+   P      V A M         C  ++ + R +++ V   L
Sbjct: 276 GRELER--PRACPPEVYAIM-------RGCWQREPQQRHSIKDVHARL 314

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  110 bits (278), Expect = 4e-27
 Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 26/205 (12%)

Query: 365 KQSEVIGTGGFGEVYKGVLPTRMREFA----------------AEIESLGRLRHKHLVNL 408
               V+G G +G VY G   +     A                 EI     L+HK++V  
Sbjct: 25  GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF-NIIKGIAAGLLYLHEEWEQ 467
            G       + +  + +P GSL +LL      +   EQ      K I  GL YLH   + 
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DN 141

Query: 468 VVIHRDVKSGNVLIDADM-NARLGDFGLA-RLFDHGKISHTTNVVGTIGYIAPELARTGK 525
            ++HRD+K  NVLI+      ++ DFG + RL      + T    GT+ Y+APE+   G 
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--FTGTLQYMAPEIIDKGP 199

Query: 526 ASCST--DVFAYGVLLLEIATGRRP 548
                  D+++ G  ++E+ATG+ P
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPP 224

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score =  109 bits (272), Expect = 4e-27
 Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 23/137 (16%)

Query: 144 SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPV 203
           ++ + A+E DT     +  D    H+GI++ S++S K              + +++G   
Sbjct: 1   ADTIVAVELDTYPNT-DIGDPSYPHIGIDIKSVRSKKTAK-----------WNMQNGKVG 48

Query: 204 QAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAST 263
            A I Y+ V++ ++  +            +       +S  +DL     E + VG SAST
Sbjct: 49  TAHIIYNSVDKRLSAVV-----------SYPNADSATVSYDVDLDNVLPEWVRVGLSAST 97

Query: 264 GRKVSSHFILGWSFSMN 280
           G    ++ IL WSF+  
Sbjct: 98  GLYKETNTILSWSFTSK 114

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score = 74.1 bits (181), Expect = 4e-15
 Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 12/134 (8%)

Query: 12  FFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVI----- 66
            F   + + S  +   +   FN+   +Q  +  +  +     G L LT  + N       
Sbjct: 110 SFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSS 169

Query: 67  -GHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPG 125
            G A +  P+ + + S         +SF   F F I +P+S        F  +   S P 
Sbjct: 170 VGRALFYAPVHIWESSA------VVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPS 223

Query: 126 GKAEHYLGILNSTN 139
           G     LG+    N
Sbjct: 224 GSTGRLLGLFPDAN 237

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  110 bits (278), Expect = 7e-27
 Identities = 68/284 (23%), Positives = 105/284 (36%), Gaps = 57/284 (20%)

Query: 368 EVIGTGGFGEVYKGVL--------PTR--------------MREFAAEIESLGRLRHKHL 405
             +G G FGEVY+G +        P +                +F  E   + +  H+++
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN-----ENFVLSWEQRFNIIKGIAAGLLY 460
           V   G   +     ++ + +  G L S L +      +   L+     ++ + IA G  Y
Sbjct: 96  VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155

Query: 461 LHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHT-TNVVGTIGYI 516
           L    E   IHRD+ + N L+        A++GDFG+AR      I        G    +
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRASYYRKGGCAML 207

Query: 517 -----APELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVL 570
                 PE    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRM 264

Query: 571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           D   P      V   M         C   + E RP    +L  +
Sbjct: 265 DP--PKNCPGPVYRIM-------TQCWQHQPEDRPNFAIILERI 299

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  110 bits (276), Expect = 8e-27
 Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 62/289 (21%)

Query: 368 EVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHKHLV 406
             +G G FG+V+                             ++F  E E L  L+H+H+V
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--------------ENFVLSWEQRFNIIK 452
              G C     L++V++Y+ +G L+  L  +                  L   Q  +I  
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGT 512
            IA+G++YL     Q  +HRD+ + N L+ A++  ++GDFG++R       S     VG 
Sbjct: 141 QIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV----YSTDYYRVGG 193

Query: 513 IGYI-----APELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW-VLEFQH 565
              +      PE     K +  +DV+++GV+L EI T G++P     F L +  V+E   
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP----WFQLSNTEVIECIT 249

Query: 566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            G+VL+   P +    V   M       L C  ++ + R  ++++ + L
Sbjct: 250 QGRVLER--PRVCPKEVYDVM-------LGCWQREPQQRLNIKEIYKIL 289

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  110 bits (278), Expect = 2e-26
 Identities = 67/284 (23%), Positives = 103/284 (36%), Gaps = 57/284 (20%)

Query: 368 EVIGTGGFGEVYKGVLPTR----------------------MREFAAEIESLGRLRHKHL 405
             +G G FGEVY+G +                           +F  E   + +  H+++
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN-----ENFVLSWEQRFNIIKGIAAGLLY 460
           V   G   +     ++ + +  G L S L +      +   L+     ++ + IA G  Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196

Query: 461 LHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGKISHT-TNVVGTIGYI 516
           L    E   IHRD+ + N L+        A++GDFG+AR      I        G    +
Sbjct: 197 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----DIYRAGYYRKGGCAML 248

Query: 517 -----APELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVL 570
                 PE    G  +  TD +++GVLL EI + G  P  S        VLEF   G  +
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTSGGRM 305

Query: 571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           D   P      V   M         C   + E RP    +L  +
Sbjct: 306 DP--PKNCPGPVYRIM-------TQCWQHQPEDRPNFAIILERI 340

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  109 bits (275), Expect = 2e-26
 Identities = 67/343 (19%), Positives = 111/343 (32%), Gaps = 83/343 (24%)

Query: 341 LEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----------------- 383
           LED  +                      ++G G FG V +  L                 
Sbjct: 15  LEDVLIP------EQQF-------TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA 61

Query: 384 ----PTRMREFAAEIESLGRLRHKHLVNLQGWC------KRKRDLLLVYDYIPNGSLDSL 433
                + + EF  E   +    H H+  L G         R    +++  ++ +G L + 
Sbjct: 62  DIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAF 121

Query: 434 L----FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL 489
           L         F L  +     +  IA G+ YL     +  IHRD+ + N ++  DM   +
Sbjct: 122 LLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCV 178

Query: 490 GDFGLARLFDHGKISHTTNVVGTIGYI-----APELARTGKASCSTDVFAYGVLLLEIAT 544
            DFGL+R    G         G    +     A E       +  +DV+A+GV + EI T
Sbjct: 179 ADFGLSRKIYSGDYY----RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234

Query: 545 -GRRP---IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQK 600
            G+ P   I++        +  +   G  L    P      V   M         C    
Sbjct: 235 RGQTPYAGIENAE------IYNYLIGGNRLKQ--PPECMEEVYDLM-------YQCWSAD 279

Query: 601 AEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRSEMNSRYLEI 643
            + RP+   +   L  + +L        L    +  +  Y+ I
Sbjct: 280 PKQRPSFTCLRMEL--ENIL------GHLSVLSTSQDPLYINI 314

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  111 bits (278), Expect = 3e-26
 Identities = 54/273 (19%), Positives = 106/273 (38%), Gaps = 39/273 (14%)

Query: 364 FKQSEVIGTGGFGEVY------------KGVLPTRMREFAAEIESLGRL-RHKHLVNLQG 410
           F   +V+G G  G +             K +LP        E++ L     H +++    
Sbjct: 26  FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFC 85

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             K ++   +  +     +L   + + ++F     +   +++   +GL +LH      ++
Sbjct: 86  TEKDRQFQYIAIELCA-ATLQEYV-EQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIV 140

Query: 471 HRDVKSGNVLI-----DADMNARLGDFGLARLFDHGKIS--HTTNVVGTIGYIAPEL--- 520
           HRD+K  N+LI        + A + DFGL +    G+ S    + V GT G+IAPE+   
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE 200

Query: 521 ARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
                 + + D+F+ G +   + + G  P                     LD + P    
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL----QRQANILLGACSLDCLHPEKHE 256

Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
             +    EL+ +  ++    +   RP+ + VL+
Sbjct: 257 DVIAR--ELIEK--MIAMDPQ--KRPSAKHVLK 283

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  108 bits (271), Expect = 4e-26
 Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 32/206 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGV-LPT----------------RMREFAAEIESLGRLRHKHLV 406
           F + E IG G FGEV+KG+   T                 + +   EI  L +    ++ 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
              G   +   L ++ +Y+  GS   LL   E   L   Q   I++ I  GL YLH    
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHS--- 137

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN----VVGTIGYIAPELAR 522
           +  IHRD+K+ NVL+      +L DFG+A     G+++ T       VGT  ++APE+ +
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRNTFVGTPFWMAPEVIK 192

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRP 548
                   D+++ G+  +E+A G  P
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPP 218

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  108 bits (272), Expect = 4e-26
 Identities = 48/217 (22%), Positives = 81/217 (37%), Gaps = 43/217 (19%)

Query: 368 EVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRHKHLV 406
           +++G G FG V +G L                        + EF +E   +    H +++
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99

Query: 407 NLQGWCKRKRDLLLVYDYI-----PNGSLDSLL----FDNENFVLSWEQRFNIIKGIAAG 457
            L G C       +    +       G L + L     +     +  +     +  IA G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI- 516
           + YL     +  +HRD+ + N ++  DM   + DFGL++    G         G I  + 
Sbjct: 160 MEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY----RQGRIAKMP 212

Query: 517 ----APELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
               A E       +  +DV+A+GV + EIAT G  P
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  109 bits (273), Expect = 6e-26
 Identities = 39/324 (12%), Positives = 76/324 (23%), Gaps = 71/324 (21%)

Query: 344 WELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA----------- 392
           W  +       S L    +  K  E +  G    V+      R+ +FA            
Sbjct: 45  WPQNAETTVD-SLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSR 103

Query: 393 --------EIESLGRLRHKHLVNLQGWCK--------------------------RKRDL 418
                      +  RL  +     +   +                             + 
Sbjct: 104 SELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANY 163

Query: 419 LLVYDYIPNGSLDSLL-----FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
           LL+     +  L+ L                     +   +      L  +    ++H  
Sbjct: 164 LLLMPA-ASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHGH 219

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL--ARTGKASCSTD 531
               N+ I  D    LGD            +        + Y   E   A T   + + +
Sbjct: 220 FTPDNLFIMPDGRLMLGDVSALWKVG----TRGPASSVPVTYAPREFLNASTATFTHALN 275

Query: 532 VFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM-ELVL 590
            +  G+ +  +     P     F LV   ++       L V   +  +      + + V 
Sbjct: 276 AWQLGLSIYRVWCLFLP-----FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVK 330

Query: 591 QL--GLLCSHQKAEARPTMRQVLR 612
            L    L        R    + + 
Sbjct: 331 TLIGRFLNFD--RRRRLLPLEAME 352

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  109 bits (274), Expect = 7e-26
 Identities = 25/244 (10%), Positives = 61/244 (25%), Gaps = 58/244 (23%)

Query: 364 FKQSEVIGTGGFGEVYKG------------VLPT----------RMREFAAEIESLGRLR 401
             +  V+G        +             V             +M+E    +  L  ++
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139

Query: 402 HKHLVNLQGWCKRKRDLLLVYD--------------YIPN------------GSLDSLLF 435
           ++    +        DL+                  ++ +             +   +L 
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL 199

Query: 436 DN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG 493
            +   +  L    R  +   +   L  LH      ++H  ++  ++++D      L  F 
Sbjct: 200 SHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFE 256

Query: 494 LARLFDHGKISHTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRP 548
                    +S            A  +           + + D +  G+ +  I     P
Sbjct: 257 HLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316

Query: 549 IDSD 552
              D
Sbjct: 317 NTDD 320

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  108 bits (271), Expect = 8e-26
 Identities = 44/218 (20%), Positives = 87/218 (39%), Gaps = 38/218 (17%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLRHK- 403
           + +   + IG+GG  +V++ +   +                 +  +  EI  L +L+   
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 404 -HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
             ++ L  +    + + +V +   N  L+S L   ++      +R +  K +   +  +H
Sbjct: 69  DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIH 125

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHTTNVVGTIGYIAPEL- 520
              +  ++H D+K  N LI  D   +L DFG+A             + VGT+ Y+ PE  
Sbjct: 126 ---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181

Query: 521 ----------ARTGKASCSTDVFAYGVLLLEIATGRRP 548
                         K S  +DV++ G +L  +  G+ P
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  107 bits (268), Expect = 1e-25
 Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 27/203 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGV--------------LPTRMREFAAEIESLGRLRHKHLVNLQ 409
           F   E +G G +G VYK +              + + ++E   EI  + +    H+V   
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
           G   +  DL +V +Y   GS+  ++       L+ ++   I++    GL YLH       
Sbjct: 91  GSYFKNTDLWIVMEYCGAGSVSDIIRLRNK-TLTEDEIATILQSTLKGLEYLHF---MRK 146

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN----VVGTIGYIAPELARTGK 525
           IHRD+K+GN+L++ + +A+L DFG+A     G+++ T      V+GT  ++APE+ +   
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDTMAKRNTVIGTPFWMAPEVIQEIG 201

Query: 526 ASCSTDVFAYGVLLLEIATGRRP 548
            +C  D+++ G+  +E+A G+ P
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPP 224

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  107 bits (268), Expect = 1e-25
 Identities = 44/218 (20%), Positives = 87/218 (39%), Gaps = 38/218 (17%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLRHK- 403
           + +   + IG+GG  +V++ +   +                 +  +  EI  L +L+   
Sbjct: 28  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87

Query: 404 -HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
             ++ L  +    + + +V +   N  L+S L   ++      +R +  K +   +  +H
Sbjct: 88  DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIH 144

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHTTNVVGTIGYIAPEL- 520
              +  ++H D+K  N LI  D   +L DFG+A             + VGT+ Y+ PE  
Sbjct: 145 ---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200

Query: 521 ----------ARTGKASCSTDVFAYGVLLLEIATGRRP 548
                         K S  +DV++ G +L  +  G+ P
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 238

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  106 bits (266), Expect = 1e-25
 Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 39/210 (18%)

Query: 369 VIGTGGFGEVY------------------KGVLPTRMRE-FAAEIESLGRLRHKHLVNLQ 409
            +G G FG VY                    +    +      EIE    LRH +++ + 
Sbjct: 21  PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLLYLHE 463
            +   ++ + L+ ++ P G L    +      L    RF+       ++ +A  L Y HE
Sbjct: 81  NYFHDRKRIYLMLEFAPRGEL----YK----ELQKHGRFDEQRSATFMEELADALHYCHE 132

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
              + VIHRD+K  N+L+      ++ DFG +      +   T    GT+ Y+ PE+   
Sbjct: 133 ---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR-RTM--CGTLDYLPPEMIEG 186

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
                  D++  GVL  E   G  P DS  
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  108 bits (271), Expect = 1e-25
 Identities = 43/218 (19%), Positives = 86/218 (39%), Gaps = 38/218 (17%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLRHK- 403
           + +   + IG+GG  +V++ +   +                 +  +  EI  L +L+   
Sbjct: 56  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115

Query: 404 -HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
             ++ L  +    + + +V +   N  L+S L   ++      +R +  K +   +  +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIH 172

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHTTNVVGTIGYIAPEL- 520
              +  ++H D+K  N LI  D   +L DFG+A             + VG + Y+ PE  
Sbjct: 173 ---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228

Query: 521 ----------ARTGKASCSTDVFAYGVLLLEIATGRRP 548
                         K S  +DV++ G +L  +  G+ P
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  106 bits (267), Expect = 2e-25
 Identities = 75/351 (21%), Positives = 132/351 (37%), Gaps = 89/351 (25%)

Query: 331 LYRRIAQFEILED--WELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----- 383
           +   ++++E+ ED  WE     +                + +G G FG+V          
Sbjct: 15  MLAGVSEYELPEDPKWEFP-RDKLTLG------------KPLGEGAFGQVVMAEAVGIDK 61

Query: 384 -------------------PTRMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYD 423
                                 + +  +E+E +  + +HK+++NL G C +   L ++ +
Sbjct: 62  DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 121

Query: 424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKG--------------IAAGLLYLHEEWEQVV 469
           Y   G+L   L       + +    N +                +A G+ YL     Q  
Sbjct: 122 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKC 178

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYI-----APELART 523
           IHRD+ + NVL+  +   ++ DFGLAR      I++       T G +     APE    
Sbjct: 179 IHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFD 233

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRP---IDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
              +  +DV+++GVL+ EI T G  P   I  +       + +    G  +D   P   +
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LFKLLKEGHRMDK--PANCT 285

Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLD 630
           + +   M         C H     RPT +Q++  L  D +L +  N   LD
Sbjct: 286 NELYMMM-------RDCWHAVPSQRPTFKQLVEDL--DRILTLTTNEEYLD 327

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  106 bits (267), Expect = 2e-25
 Identities = 34/169 (20%), Positives = 71/169 (42%), Gaps = 13/169 (7%)

Query: 393 EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF---- 448
           E++ +  +++++ +  +G      ++ ++Y+Y+ N S+            ++        
Sbjct: 93  ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152

Query: 449 --NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
              IIK +     Y+H E  + + HRDVK  N+L+D +   +L DFG +      KI   
Sbjct: 153 IKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI-KG 209

Query: 507 TNVVGTIGYIAPEL--ARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           +   GT  ++ PE     +       D+++ G+ L  +     P     
Sbjct: 210 S--RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  105 bits (264), Expect = 4e-25
 Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 37/211 (17%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA-------------------AEIESLGRLRHKH 404
           FK  +++G G F  V         RE+A                    E + + RL H  
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAGL 458
            V L    +    L     Y  NG L           +     F+          I + L
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGEL----L----KYIRKIGSFDETCTRFYTAEIVSAL 143

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIA 517
            YLH    + +IHRD+K  N+L++ DM+ ++ DFG A++          N  VGT  Y++
Sbjct: 144 EYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 200

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           PEL     A  S+D++A G ++ ++  G  P
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 231

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  105 bits (263), Expect = 4e-25
 Identities = 51/292 (17%), Positives = 99/292 (33%), Gaps = 68/292 (23%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFA-AEIESLGRL-RHKH 404
           F + E IG+G FG V+K V                   +   + A  E+ +   L +H H
Sbjct: 13  FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF--VLSWEQRFNIIKGIAAGLLYLH 462
           +V           +L+  +Y   GSL   + +N          +  +++  +  GL Y+H
Sbjct: 73  VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132

Query: 463 EEWEQVVIHRDVKSGNVLIDAD-------------------MNARLGDFGLARLFDHGKI 503
                 ++H D+K  N+ I                      +  ++GD G        +I
Sbjct: 133 ---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-----TRI 184

Query: 504 SHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE 562
           S      G   ++A E+ +         D+FA  + ++  A       +          +
Sbjct: 185 SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--------Q 236

Query: 563 FQHL--GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
           +  +  G++     P +         EL+        H   E RP+   +++
Sbjct: 237 WHEIRQGRL-----PRIPQVLSQEFTELLKV----MIHPDPERRPSAMALVK 279

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  103 bits (259), Expect = 1e-24
 Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 31/213 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGV-LPT----------------RMREFAAEIESLGRLRHKHLV 406
           ++  EVIG+G    V      P                  M E   EI+++ +  H ++V
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLLY 460
           +       K +L LV   +  GS+  ++              +      I++ +  GL Y
Sbjct: 77  SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL-ARLFDHGKISHTTN---VVGTIGYI 516
           LH+      IHRDVK+GN+L+  D + ++ DFG+ A L   G I+        VGT  ++
Sbjct: 137 LHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193

Query: 517 APELARTGKA-SCSTDVFAYGVLLLEIATGRRP 548
           APE+    +      D++++G+  +E+ATG  P
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAP 226

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  103 bits (259), Expect = 2e-24
 Identities = 73/346 (21%), Positives = 124/346 (35%), Gaps = 94/346 (27%)

Query: 331 LYRRIAQFEILED--WELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----- 383
           L   +  F+ILED  WE                      + +G G FG+V K        
Sbjct: 3   LSLSVDAFKILEDPKWEFP-RKNLVLG------------KTLGEGEFGKVVKATAFHLKG 49

Query: 384 -----------------PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP 426
                            P+ +R+  +E   L ++ H H++ L G C +   LLL+ +Y  
Sbjct: 50  RAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAK 109

Query: 427 NGSLDSLL------FDNENFVLSWEQRFNIIKG----------------IAAGLLYLHEE 464
            GSL   L                    ++                   I+ G+ YL E 
Sbjct: 110 YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE- 168

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYI-----AP 518
               ++HRD+ + N+L+      ++ DFGL+R      +    + V  + G I     A 
Sbjct: 169 --MKLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEEDSYVKRSQGRIPVKWMAI 221

Query: 519 ELARTGKASCSTDVFAYGVLLLEIAT-GRRP---IDSDHFILVDWVLEFQHLGQVLDVVD 574
           E       +  +DV+++GVLL EI T G  P   I  +       +      G  ++   
Sbjct: 222 ESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER------LFNLLKTGHRMER-- 273

Query: 575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELL 620
           P+  S  +   M       L C  Q+ + RP    + + L  ++++
Sbjct: 274 PDNCSEEMYRLM-------LQCWKQEPDKRPVFADISKDL--EKMM 310

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  104 bits (261), Expect = 2e-24
 Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 81/333 (24%)

Query: 331 LYRRIAQFEILED--WELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----- 383
           +   ++++E+ ED  WE     +                + +G G FG+V          
Sbjct: 61  MLAGVSEYELPEDPKWEFP-RDKLTLG------------KPLGEGCFGQVVMAEAVGIDK 107

Query: 384 -------------------PTRMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYD 423
                                 + +  +E+E +  + +HK+++NL G C +   L ++ +
Sbjct: 108 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 167

Query: 424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKG--------------IAAGLLYLHEEWEQVV 469
           Y   G+L   L       + +    N +                +A G+ YL     Q  
Sbjct: 168 YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKC 224

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYI-----APELART 523
           IHRD+ + NVL+  +   ++ DFGLAR      I++       T G +     APE    
Sbjct: 225 IHRDLAARNVLVTENNVMKIADFGLAR-----DINNIDYYKKTTNGRLPVKWMAPEALFD 279

Query: 524 GKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV 582
              +  +DV+++GVL+ EI T G  P      I V+ + +    G  +D   P   ++ +
Sbjct: 280 RVYTHQSDVWSFGVLMWEIFTLGGSPYPG---IPVEELFKLLKEGHRMDK--PANCTNEL 334

Query: 583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
              M         C H     RPT +Q++  L+
Sbjct: 335 YMMM-------RDCWHAVPSQRPTFKQLVEDLD 360

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  103 bits (259), Expect = 2e-24
 Identities = 66/338 (19%), Positives = 118/338 (34%), Gaps = 86/338 (25%)

Query: 337 QFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLP------------ 384
           Q      WE    +R  +             + +G G FG+V +                
Sbjct: 11  QLPYDHKWEFP-RNRLSFG------------KTLGAGAFGKVVEATAYGLIKSDAAMTVA 57

Query: 385 ----------TRMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSL 433
                     T      +E++ L  L  H ++VNL G C      L++ +Y   G L + 
Sbjct: 58  VKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNF 117

Query: 434 L----------------FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSG 477
           L                 +++   L  E   +    +A G+ +L     +  IHRD+ + 
Sbjct: 118 LRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAAR 174

Query: 478 NVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYI-----APELARTGKASCSTD 531
           N+L+      ++ DFGLAR      I + +N VV     +     APE       +  +D
Sbjct: 175 NILLTHGRITKICDFGLAR-----DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 229

Query: 532 VFAYGVLLLEIAT-GRRP---IDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME 587
           V++YG+ L E+ + G  P   +  D         +    G  +    P    + +   M 
Sbjct: 230 VWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKEGFRMLS--PEHAPAEMYDIM- 281

Query: 588 LVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDN 625
                   C       RPT +Q+++ +  ++ +    N
Sbjct: 282 ------KTCWDADPLKRPTFKQIVQLI--EKQISESTN 311

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  103 bits (258), Expect = 2e-24
 Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 34/210 (16%)

Query: 364 FKQSEVIGTGGFGEVYKGV-LPT---------------RMREFAAEIESLGRLRHKHLVN 407
           ++    +G G FG+VYK     T                + ++  EIE L    H ++V 
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L G       L ++ ++ P G++D+++ + +   L+  Q   + + +   L +LH    +
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLHS---K 136

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN----VVGTIGYIAPELART 523
            +IHRD+K+GNVL+  + + RL DFG++      K   T       +GT  ++APE+   
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMC 191

Query: 524 GKAS-----CSTDVFAYGVLLLEIATGRRP 548
                       D+++ G+ L+E+A    P
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPP 221

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  103 bits (260), Expect = 2e-24
 Identities = 64/302 (21%), Positives = 111/302 (36%), Gaps = 79/302 (26%)

Query: 368 EVIGTGGFGEVYKGVLP----------------------TRMREFAAEIESLGRLRHKHL 405
             IG G FG V++   P                          +F  E   +    + ++
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLL----------------------FDNENFVLS 443
           V L G C   + + L+++Y+  G L+  L                             LS
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172

Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI 503
             ++  I + +AAG+ YL    E+  +HRD+ + N L+  +M  ++ DFGL+R      I
Sbjct: 173 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSR-----NI 224

Query: 504 SHTTN--VVGTIGYI-----APELARTGKASCSTDVFAYGVLLLEIAT-GRRP---IDSD 552
            ++ +         I      PE     + +  +DV+AYGV+L EI + G +P   +  +
Sbjct: 225 -YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283

Query: 553 HFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
                  V+ +   G +L    P      +   M        LC  +    RP+   + R
Sbjct: 284 E------VIYYVRDGNILAC--PENCPLELYNLM-------RLCWSKLPADRPSFCSIHR 328

Query: 613 YL 614
            L
Sbjct: 329 IL 330

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  103 bits (259), Expect = 5e-24
 Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 30/193 (15%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHLVNLQGW 411
           E +G+G FG V++ V     R F A                EI  + +L H  L+NL   
Sbjct: 57  EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDN---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            + K +++L+ +++  G L    FD    E++ +S  +  N ++    GL ++HE     
Sbjct: 117 FEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HS 169

Query: 469 VIHRDVKSGNVLIDADMNARL--GDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
           ++H D+K  N++ +    + +   DFGLA   +  +I        T  + APE+      
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--VKVTTATAEFAAPEIVDREPV 227

Query: 527 SCSTDVFAYGVLL 539
              TD++A GVL 
Sbjct: 228 GFYTDMWAIGVLG 240

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  102 bits (257), Expect = 9e-24
 Identities = 71/304 (23%), Positives = 120/304 (39%), Gaps = 68/304 (22%)

Query: 368 EVIGTGGFGEVYKGVL------------------------PTRMREFAAEIESLGRL-RH 402
           + +G G FG+V                                + +  +E+E +  + +H
Sbjct: 75  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL--------------FDNENFVLSWEQRF 448
           K+++NL G C +   L ++ +Y   G+L   L                N    LS +   
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194

Query: 449 NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN 508
           +    +A G+ YL     +  IHRD+ + NVL+  D   ++ DFGLAR      I H   
Sbjct: 195 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDY 246

Query: 509 -VVGTIGYI-----APELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVL 561
               T G +     APE       +  +DV+++GVLL EI T G  P      + V+ + 
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG---VPVEELF 303

Query: 562 EFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP 621
           +    G  +D   P+  ++ +   M         C H     RPT +Q++  L  D ++ 
Sbjct: 304 KLLKEGHRMDK--PSNCTNELYMMM-------RDCWHAVPSQRPTFKQLVEDL--DRIVA 352

Query: 622 IIDN 625
           +  N
Sbjct: 353 LTSN 356

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  101 bits (253), Expect = 9e-24
 Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 31/210 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGV----------------LPTRMREFAAEIESLGRLRHKHLVN 407
           + + E IG G  G VY  +                   +      EI  +   ++ ++VN
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
                    +L +V +Y+  GSL  ++       +   Q   + +     L +LH     
Sbjct: 82  YLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS---N 135

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN----VVGTIGYIAPELART 523
            VIHRD+KS N+L+  D + +L DFG        +I+   +    +VGT  ++APE+   
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPEQSKRSTMVGTPYWMAPEVVTR 190

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
                  D+++ G++ +E+  G  P  +++
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  101 bits (255), Expect = 9e-24
 Identities = 67/298 (22%), Positives = 112/298 (37%), Gaps = 69/298 (23%)

Query: 368 EVIGTGGFGEVYKGVL----------------------PTRMREFAAEIESLGRL-RHKH 404
           + +G G FG+V +                                 +E++ +  L +H++
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLL------------FDNENFVLSWEQRFNIIK 452
           +VNL G C     +L++ +Y   G L + L            F   N   S     +   
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVG 511
            +A G+ +L     +  IHRDV + NVL+     A++GDFGLAR      I + +N +V 
Sbjct: 172 QVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLAR-----DIMNDSNYIVK 223

Query: 512 TIGYI-----APELARTGKASCSTDVFAYGVLLLEIAT-GRRP---IDSDHFILVDWVLE 562
               +     APE       +  +DV++YG+LL EI + G  P   I  +         +
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-----FYK 278

Query: 563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELL 620
               G  +    P      + + M         C   +   RPT +Q+  +L   E  
Sbjct: 279 LVKDGYQMAQ--PAFAPKNIYSIM-------QACWALEPTHRPTFQQICSFL--QEQA 325

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  101 bits (254), Expect = 1e-23
 Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 31/212 (14%)

Query: 364 FKQSEVIGTGGFGEVYKG---------------VLPTRMREFAAEIESLGRL-RHKHLVN 407
           F+  E++G G +G+VYKG               V      E   EI  L +   H+++  
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85

Query: 408 LQG------WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
             G             L LV ++   GS+  L+ + +   L  E    I + I  GL +L
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H+     VIHRD+K  NVL+  +   +L DFG++   D       T  +GT  ++APE+ 
Sbjct: 146 HQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVI 201

Query: 522 RTGKASCST-----DVFAYGVLLLEIATGRRP 548
              +   +T     D+++ G+  +E+A G  P
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  101 bits (253), Expect = 1e-23
 Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 31/210 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGV----------------LPTRMREFAAEIESLGRLRHKHLVN 407
                 IG G  G V                       R      E+  +   +H ++V 
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           +        +L ++ +++  G+L  ++       L+ EQ   + + +   L YLH    Q
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHA---Q 160

Query: 468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN----VVGTIGYIAPELART 523
            VIHRD+KS ++L+  D   +L DFG        +IS        +VGT  ++APE+   
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFC-----AQISKDVPKRKSLVGTPYWMAPEVISR 215

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
              +   D+++ G++++E+  G  P  SD 
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  103 bits (259), Expect = 2e-23
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 34/223 (15%)

Query: 342 EDWELDCPHRFRYSDLYTATKGFKQ----SEVIGTGGFGEVYKGVLPTRMREFAA----- 392
           +++  D   ++    +              E +GTG FG V++         FAA     
Sbjct: 133 DNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT 192

Query: 393 -----------EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD---NE 438
                      EI+++  LRH  LVNL    +   +++++Y+++  G L    F+   +E
Sbjct: 193 PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL----FEKVADE 248

Query: 439 NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL--GDFGLAR 496
           +  +S ++    ++ +  GL ++HE      +H D+K  N++     +  L   DFGL  
Sbjct: 249 HNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305

Query: 497 LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLL 539
             D  +        GT  + APE+A        TD+++ GVL 
Sbjct: 306 HLDPKQSVKV--TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  100 bits (252), Expect = 3e-23
 Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 34/208 (16%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA--------------------EIESLGRLRHK 403
           F     IG G FG VY      R  E  A                    E+  L +LRH 
Sbjct: 56  FSDLREIGHGSFGAVYFAR-DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
           + +  +G   R+    LV +Y    + D  L +     L   +   +  G   GL YLH 
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHS 172

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
                +IHRDVK+GN+L+      +LGDFG A       ++   + VGT  ++APE+   
Sbjct: 173 ---HNMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANSFVGTPYWMAPEVILA 224

Query: 524 GKAS---CSTDVFAYGVLLLEIATGRRP 548
                     DV++ G+  +E+A  + P
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKPP 252

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 99.7 bits (249), Expect = 4e-23
 Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 53/226 (23%)

Query: 368 EVIGTGGFGEVYKGVLP----------------------TRMREFAAEIESLGRL-RHKH 404
           + +G G FG+V +                          +  R   +E++ L  +  H +
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92

Query: 405 LVNLQGWC-KRKRDLLLVYDYIPNGSLDSLL--------------FDNENFVLSWEQRFN 449
           +VNL G C K    L+++ ++   G+L + L               D     L+ E    
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN- 508
               +A G+ +L     +  IHRD+ + N+L+      ++ DFGLAR      I    + 
Sbjct: 153 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLAR-----DIYKDPDY 204

Query: 509 VVGTIGYI-----APELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           V      +     APE       +  +DV+++GVLL EI + G  P
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =   99 bits (250), Expect = 4e-23
 Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 33/206 (16%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           ++   ++G G +G V K                       V    MRE    I+ L +LR
Sbjct: 27  YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMRE----IKLLKQLR 82

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H++LVNL   CK+K+   LV++++ + ++   L +     L ++     +  I  G+ + 
Sbjct: 83  HENLVNLLEVCKKKKRWYLVFEFVDH-TILDDL-ELFPNGLDYQVVQKYLFQIINGIGFC 140

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-L 520
           H      +IHRD+K  N+L+      +L DFG AR           + V T  Y APE L
Sbjct: 141 HSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPELL 196

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGR 546
               K   + DV+A G L+ E+  G 
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMGE 222

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  100 bits (250), Expect = 4e-23
 Identities = 66/317 (20%), Positives = 116/317 (36%), Gaps = 78/317 (24%)

Query: 368 EVIGTGGFGEVYKGVL----------------------PTRMREFAAEIESLGRL-RHKH 404
           +V+G+G FG+V                            +      +E++ + +L  H++
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLL---------------------FDNENFVLS 443
           +VNL G C     + L+++Y   G L + L                      + +  VL+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170

Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI 503
           +E        +A G+ +L     +  +HRD+ + NVL+      ++ DFGLAR      I
Sbjct: 171 FEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLAR-----DI 222

Query: 504 SHTTN-VVGTIGYI-----APELARTGKASCSTDVFAYGVLLLEIAT-GRRP---IDSDH 553
              +N VV     +     APE    G  +  +DV++YG+LL EI + G  P   I  D 
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282

Query: 554 FILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
                   +    G  +D   P   +  +   M         C    +  RP+   +  +
Sbjct: 283 N-----FYKLIQNGFKMDQ--PFYATEEIYIIM-------QSCWAFDSRKRPSFPNLTSF 328

Query: 614 LNGDELLPIIDNWSSLD 630
           L     L   +     +
Sbjct: 329 L--GCQLADAEEAMYQN 343

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  100 bits (251), Expect = 5e-23
 Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 34/206 (16%)

Query: 355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLG 398
           +  YT      ++E++G G FG+V+K        + AA                EI  + 
Sbjct: 86  NSFYT----VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141

Query: 399 RLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD---NENFVLSWEQRFNIIKGIA 455
           +L H +L+ L    + K D++LV +Y+  G L    FD   +E++ L+       +K I 
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGEL----FDRIIDESYNLTELDTILFMKQIC 197

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL--GDFGLARLFDHGKISHTTNVVGTI 513
            G+ ++H+     ++H D+K  N+L       ++   DFGLAR +   +        GT 
Sbjct: 198 EGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTP 252

Query: 514 GYIAPELARTGKASCSTDVFAYGVLL 539
            ++APE+      S  TD+++ GV+ 
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIA 278

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  100 bits (250), Expect = 6e-23
 Identities = 39/213 (18%), Positives = 76/213 (35%), Gaps = 31/213 (14%)

Query: 364 FKQSEVIGTG--GFGEVYKGV-LPT-----------------RMREFAAEIESLGRLRHK 403
           ++   VIG G      V      PT                  +     E+       H 
Sbjct: 27  YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
           ++V  +       +L +V  ++  GS   L+  +    ++      I++G+   L Y+H 
Sbjct: 87  NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFG-LARLFDHGKISHT-----TNVVGTIGYIA 517
                 +HR VK+ ++LI  D    L        +  HG+            V  + +++
Sbjct: 147 ---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS 203

Query: 518 PELARTGKA--SCSTDVFAYGVLLLEIATGRRP 548
           PE+ +         +D+++ G+   E+A G  P
Sbjct: 204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 98.4 bits (246), Expect = 7e-23
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 37/211 (17%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           +++ E IG G +G V+K                      GV  + +RE    I  L  L+
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALRE----ICLLKELK 59

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           HK++V L       + L LV+++     L     D+ N  L  E   + +  +  GL + 
Sbjct: 60  HKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFC 117

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL- 520
           H      V+HRD+K  N+LI+ +   +L +FGLAR F      ++  VV T+ Y  P++ 
Sbjct: 118 HSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVL 173

Query: 521 --ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
             A+    S S D+++ G +  E+A   RP+
Sbjct: 174 FGAKL--YSTSIDMWSAGCIFAELANAGRPL 202

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 98.5 bits (246), Expect = 1e-22
 Identities = 39/192 (20%), Positives = 83/192 (43%), Gaps = 29/192 (15%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA---------------EIESLGRLRHKHLVNLQGWC 412
           E +G G FG V++ V  +  + + A               EI  L   RH+++++L    
Sbjct: 11  EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 413 KRKRDLLLVYDYIPNGSLDSLLFD---NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
           +   +L++++++I        +F+      F L+  +  + +  +   L +LH      +
Sbjct: 71  ESMEELVMIFEFISGLD----IFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNI 123

Query: 470 IHRDVKSGNVLIDADMNARL--GDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
            H D++  N++     ++ +   +FG AR    G       +     Y APE+ +    S
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPEYYAPEVHQHDVVS 181

Query: 528 CSTDVFAYGVLL 539
            +TD+++ G L+
Sbjct: 182 TATDMWSLGTLV 193

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 98.3 bits (245), Expect = 2e-22
 Identities = 41/222 (18%), Positives = 74/222 (33%), Gaps = 40/222 (18%)

Query: 368 EVIGTGGFGEVYKG---------VL-------PTRMREFAAEIESLGRLR-HKHLVNLQG 410
            V+  GGF  VY+           L         + R    E+  + +L  H ++V    
Sbjct: 34  RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93

Query: 411 WCKRKRD--------LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
                ++         LL+ +      ++ L        LS +    I       + ++H
Sbjct: 94  AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT-----------NVVG 511
            + +  +IHRD+K  N+L+      +L DFG A    H      +               
Sbjct: 154 RQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212

Query: 512 TIGYIAPEL---ARTGKASCSTDVFAYGVLLLEIATGRRPID 550
           T  Y  PE+             D++A G +L  +   + P +
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 97.6 bits (244), Expect = 2e-22
 Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 33/206 (16%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           +++   IG G +G V+K                       +    +RE    I  L +L+
Sbjct: 5   YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALRE----IRMLKQLK 60

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H +LVNL    +RKR L LV++Y  + ++   L D     +      +I       + + 
Sbjct: 61  HPNLVNLLEVFRRKRRLHLVFEYCDH-TVLHEL-DRYQRGVPEHLVKSITWQTLQAVNFC 118

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-L 520
           H+      IHRDVK  N+LI      +L DFG ARL   G   +  + V T  Y +PE L
Sbjct: 119 HKHN---CIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRWYRSPELL 174

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGR 546
               +     DV+A G +  E+ +G 
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSGV 200

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  100 bits (251), Expect = 2e-22
 Identities = 70/309 (22%), Positives = 116/309 (37%), Gaps = 42/309 (13%)

Query: 264 GRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILL 323
           GR ++ +F+      +    P   ++       +    + F    ++    LS       
Sbjct: 102 GRNLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVA----- 156

Query: 324 GTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVY---- 379
                F  Y     F     W+         +        F+Q  V+G GGFGEV     
Sbjct: 157 ----PFADYLDSIYFNRFLQWKWLERQPVTKNT-------FRQYRVLGKGGFGEVCACQV 205

Query: 380 -------------KGVLPTRMREFAAEIES--LGRLRHKHLVNLQGWCKRKRDLLLVYDY 424
                        K  +  R  E  A  E   L ++  + +V+L    + K  L LV   
Sbjct: 206 RATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 265

Query: 425 IPNGSLDSLLFDNENFVLSWEQ-RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA 483
           +  G L   ++          +  F   + I  GL  LH    + +++RD+K  N+L+D 
Sbjct: 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGLEDLHR---ERIVYRDLKPENILLDD 321

Query: 484 DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIA 543
             + R+ D GLA     G+       VGT+GY+APE+ +  + + S D +A G LL E+ 
Sbjct: 322 HGHIRISDLGLAVHVPEGQTIKG--RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379

Query: 544 TGRRPIDSD 552
            G+ P    
Sbjct: 380 AGQSPFQQR 388

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  101 bits (252), Expect = 2e-22
 Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 31/208 (14%)

Query: 364 FKQSEVIGTGGFGEVY-----------------KGVLPTRMREFAAEIE-----SLGRLR 401
           F    +IG GGFGEVY                 K  +  +  E  A  E      +    
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
              +V +         L  + D +  G L   L  +  F  + + RF   + I  GL ++
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-DMRFYAAE-IILGLEHM 308

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H    + V++RD+K  N+L+D   + R+ D GLA  F   K       VGT GY+APE+ 
Sbjct: 309 HN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVL 362

Query: 522 RTGKA-SCSTDVFAYGVLLLEIATGRRP 548
           + G A   S D F+ G +L ++  G  P
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSP 390

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 98.0 bits (244), Expect = 2e-22
 Identities = 49/240 (20%), Positives = 84/240 (35%), Gaps = 31/240 (12%)

Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           M   + +I  +     K+ V        K  L +        +L   + +    +   E 
Sbjct: 105 MDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWM-NRRCSLEDREH 163

Query: 447 RF--NIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS 504
               +I   IA  + +LH    + ++HRD+K  N+    D   ++GDFGL    D  +  
Sbjct: 164 GVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 220

Query: 505 HT-----------TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
            T           T  VGT  Y++PE       S   D+F+ G++L E+           
Sbjct: 221 QTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV 280

Query: 554 FILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
            I+ D          V ++  P L +     E  +V     + S      RP    ++  
Sbjct: 281 RIITD----------VRNLKFPLLFTQKYPQEHMMVQD---MLSP-SPTERPEATDIIEN 326

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 98.5 bits (246), Expect = 3e-22
 Identities = 55/209 (26%), Positives = 82/209 (39%), Gaps = 43/209 (20%)

Query: 369 VIGTGGFGEVY-----------------KGVLPTRMREFA---AEIESLGRLRHKHLVNL 408
            IG G FG+V                  K        E      E++ +  L H  LVNL
Sbjct: 22  AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-VERNEVRNVFKELQIMQGLEHPFLVNL 80

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI------IKGIAAGLLYLH 462
               + + D+ +V D +  G L         + L     F        I  +   L YL 
Sbjct: 81  WYSFQDEEDMFMVVDLLLGGDL----R----YHLQQNVHFKEETVKLFICELVMALDYLQ 132

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
               Q +IHRD+K  N+L+D   +  + DF +A +        T  + GT  Y+APE+  
Sbjct: 133 N---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT--MAGTKPYMAPEMFS 187

Query: 523 TGKA---SCSTDVFAYGVLLLEIATGRRP 548
           + K    S + D ++ GV   E+  GRRP
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRP 216

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 97.3 bits (243), Expect = 5e-22
 Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 48/222 (21%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           +++   IG G FGEV+K                      G   T +RE    I+ L  L+
Sbjct: 19  YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE----IKILQLLK 74

Query: 402 HKHLVNLQG--------WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
           H+++VNL          + + K  + LV+D+  +  L  LL  N     +  +   +++ 
Sbjct: 75  HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL-SNVLVKFTLSEIKRVMQM 132

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT---TNVV 510
           +  GL Y+H      ++HRD+K+ NVLI  D   +L DFGLAR F   K S     TN V
Sbjct: 133 LLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRV 189

Query: 511 GTIGYIAPEL---ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
            T+ Y  PEL    R        D++  G ++ E+ T R PI
Sbjct: 190 VTLWYRPPELLLGER--DYGPPIDLWGAGCIMAEMWT-RSPI 228

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 96.6 bits (241), Expect = 5e-22
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 37/200 (18%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------------EIESLGRLRHKHL 405
           E +G+G F  V K    +   E+AA                      E+  L ++ H ++
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHE 463
           + L    + + D++L+ + +  G L    FD   +   LS E+  + IK I  G+ YLH 
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT 133

Query: 464 EWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
              + + H D+K  N+++        + +L DFGLA   + G      N+ GT  ++APE
Sbjct: 134 ---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPE 188

Query: 520 LARTGKASCSTDVFAYGVLL 539
           +          D+++ GV+ 
Sbjct: 189 IVNYEPLGLEADMWSIGVIT 208

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 96.5 bits (240), Expect = 1e-21
 Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 32/210 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-----------------PTRMREFAAEIESLGRLRHKHLV 406
           F++   +G G  G V+K                    P    +   E++ L      ++V
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF---VLSWEQRFNIIKGIAAGLLYLHE 463
              G      ++ +  +++  GSLD +L         +L       +   +  GL YL E
Sbjct: 95  GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE 149

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLA-RLFDHGKISHTTNVVGTIGYIAPELAR 522
           + +  ++HRDVK  N+L+++    +L DFG++ +L D    S   + VGT  Y++PE  +
Sbjct: 150 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 203

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
               S  +D+++ G+ L+E+A GR PI   
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 98.3 bits (245), Expect = 1e-21
 Identities = 72/314 (22%), Positives = 112/314 (35%), Gaps = 50/314 (15%)

Query: 265 RKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNS-FSLQIKILIAALSTVAVILL 323
           R   +  +               L           + +  F   ++ ++A L        
Sbjct: 103 RPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQ------ 156

Query: 324 GTLLIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVY---- 379
                F+ +     F     W+                  F    V+G GGFGEV+    
Sbjct: 157 ---APFQEFLDSLYFLRFLQWKWLEAQPMGEDW-------FLDFRVLGRGGFGEVFACQM 206

Query: 380 -------------KGVLPTRMREFAAEIES--LGRLRHKHLVNLQGWCKRKRDLLLVYDY 424
                        K  L  R     A +E   L ++  + +V+L    + K DL LV   
Sbjct: 207 KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTI 266

Query: 425 IPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAGLLYLHEEWEQVVIHRDVKSGN 478
           +  G +      +   V      F   +       I +GL +LH+   + +I+RD+K  N
Sbjct: 267 MNGGDI----RYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPEN 319

Query: 479 VLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVL 538
           VL+D D N R+ D GLA     G+ + T    GT G++APEL    +   S D FA GV 
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378

Query: 539 LLEIATGRRPIDSD 552
           L E+   R P  + 
Sbjct: 379 LYEMIAARGPFRAR 392

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 97.2 bits (242), Expect = 1e-21
 Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 46/232 (19%)

Query: 364 FKQSEVIGTGGFGEVY------------KGVLPTRMREFAAEIESLGRL-RHKHLVNLQG 410
               +++G G  G V             K +L         EI+ L     H +++    
Sbjct: 17  VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYC 76

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLL-----FDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                R L +  +   N +L  L+      D    +       ++++ IA+G+ +LH   
Sbjct: 77  SETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS-- 133

Query: 466 EQVVIHRDVKSGNVLID-------------ADMNARLGDFGLARLFDHGKISHTTN---V 509
              +IHRD+K  N+L+               ++   + DFGL +  D G+ S  TN    
Sbjct: 134 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192

Query: 510 VGTIGYIAPEL-------ARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDH 553
            GT G+ APEL           + + S D+F+ G +   I + G+ P    +
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 64/274 (23%), Positives = 107/274 (39%), Gaps = 49/274 (17%)

Query: 368 EVIGTGGFGEVYKGVL-----------------PTRMREFAAEIE-SLGRLRHKHLVNLQ 409
             +G G +G V K                        +    +++ S+  +     V   
Sbjct: 13  MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLLYLHE 463
           G   R+ D+ +  + + + SLD         V+   Q         I   I   L +LH 
Sbjct: 73  GALFREGDVWICMELM-DTSLDKFY----KQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGL-ARLFDHGKISHTTNVVGTIGYIAPE--- 519
           +    VIHRDVK  NVLI+A    ++ DFG+   L D   ++   +  G   Y+APE   
Sbjct: 128 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD--DVAKDID-AGCKPYMAPERIN 182

Query: 520 -LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
                   S  +D+++ G+ ++E+A  R P D        W   FQ L QV++   P L 
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIELAILRFPYD-------SWGTPFQQLKQVVEEPSPQLP 235

Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
           +    AE          C  + ++ RPT  ++++
Sbjct: 236 ADKFSAEFVDFTS---QCLKKNSKERPTYPELMQ 266

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 95.9 bits (239), Expect = 1e-21
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 37/200 (18%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------------EIESLGRLRHKHL 405
           E +G+G F  V K    +   E+AA                      E+  L ++ H ++
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHE 463
           + L    + + D++L+ + +  G L    FD   +   LS E+  + IK I  G+ YLH 
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT 133

Query: 464 EWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
              + + H D+K  N+++        + +L DFGLA   + G      N+ GT  ++APE
Sbjct: 134 ---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPE 188

Query: 520 LARTGKASCSTDVFAYGVLL 539
           +          D+++ GV+ 
Sbjct: 189 IVNYEPLGLEADMWSIGVIT 208

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 96.4 bits (240), Expect = 2e-21
 Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 55/247 (22%)

Query: 343 DWELDCP---HRFRYSDLYTATKGFKQSEVIGTGGFGEVYK------------------- 380
           D++        R R  DL+   +G K    +G G +G VYK                   
Sbjct: 4   DYDFKVKLSSERERVEDLFE-YEGCK----VGRGTYGHVYKAKRKDGKDDKDYALKQIEG 58

Query: 381 -GVLPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRD--LLLVYDYIPN---GSLDSL- 433
            G+  +  RE    I  L  L+H ++++LQ       D  + L++DY  +     +    
Sbjct: 59  TGISMSACRE----IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHR 114

Query: 434 --LFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR--- 488
               + +   L      +++  I  G+ YLH  W   V+HRD+K  N+L+  +   R   
Sbjct: 115 ASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRV 171

Query: 489 -LGDFGLARLFD--HGKISHTTNVVGTIGYIAPEL---ARTGKASCSTDVFAYGVLLLEI 542
            + D G ARLF+     ++    VV T  Y APEL   AR    + + D++A G +  E+
Sbjct: 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFAEL 229

Query: 543 ATGRRPI 549
            T   PI
Sbjct: 230 LT-SEPI 235

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 94.2 bits (235), Expect = 3e-21
 Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 36/207 (17%)

Query: 364 FKQSEVIGTGGFGEVYK---------------------GVLPTRMREFAAEIESLGRLRH 402
           +++ E +G G +G VYK                     G+  T +RE    I  L  L H
Sbjct: 23  YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE----ISLLKELHH 78

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V+L      +R L LV++++    L  +L D     L   Q    +  +  G+ + H
Sbjct: 79  PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCH 136

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL-- 520
           +     ++HRD+K  N+LI++D   +L DFGLAR F     S+T  VV T+ Y AP++  
Sbjct: 137 QHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLM 192

Query: 521 -ARTGKASCSTDVFAYGVLLLEIATGR 546
            ++    S S D+++ G +  E+ TG+
Sbjct: 193 GSKK--YSTSVDIWSIGCIFAEMITGK 217

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 94.7 bits (235), Expect = 4e-21
 Identities = 45/331 (13%), Positives = 87/331 (26%), Gaps = 89/331 (26%)

Query: 344 WELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKG------------VLPT------ 385
           W    P R   S+L    +   +  V+G        +             V         
Sbjct: 56  WNTGQPFRVE-SELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPS 114

Query: 386 ----RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD------------------ 423
               +M+E    +  L  ++++    +        DL+                      
Sbjct: 115 NAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLS 174

Query: 424 -----YIPNGSLDSLL-----FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD 473
                     +L +         + +  L    R  +   +   L  LH      ++H  
Sbjct: 175 RFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTY 231

Query: 474 VKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL-----------AR 522
           ++  ++++D      L  F         +         + G+  PEL            R
Sbjct: 232 LRPVDIVLDQRGGVFLTGFEHLV-----RDGARVVSSVSRGFEPPELEARRATISYHRDR 286

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSY 581
               + S D +A G+++  I     PI  D  +   +W+               N+    
Sbjct: 287 RTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRS----------CKNI-PQP 335

Query: 582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
           V     L+   G L      E R    Q + 
Sbjct: 336 V---RALL--EGFLRYP--KEDRLLPLQAME 359

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 93.0 bits (232), Expect = 5e-21
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 36/207 (17%)

Query: 364 FKQSEVIGTGGFGEVYK---------------------GVLPTRMREFAAEIESLGRLRH 402
           +   E IG G +G VYK                     G+  T +RE    I  L  L+H
Sbjct: 4   YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE----ISILKELKH 59

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V L      K+ L+LV++++    L  LL D     L      + +  +  G+ Y H
Sbjct: 60  SNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYCH 117

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL-- 520
           +     V+HRD+K  N+LI+ +   ++ DFGLAR F      +T  +V T+ Y AP++  
Sbjct: 118 DRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLM 173

Query: 521 -ARTGKASCSTDVFAYGVLLLEIATGR 546
            ++    S + D+++ G +  E+  G 
Sbjct: 174 GSKK--YSTTIDIWSVGCIFAEMVNGT 198

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 93.5 bits (233), Expect = 5e-21
 Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 42/221 (19%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-----------------PTRMREFAAEIESLGRL-RHKHL 405
            K    IG G +G V K V                      ++   +++ + R     ++
Sbjct: 24  LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI 83

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLL 459
           V   G   R+ D  +  + + + S D      +      +          I       L 
Sbjct: 84  VQFYGALFREGDCWICMELM-STSFDKFY---KYVYSVLDDVIPEEILGKITLATVKALN 139

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT---TNVVGTIGYI 516
           +L E  +  +IHRD+K  N+L+D   N +L DFG++     G++  +   T   G   Y+
Sbjct: 140 HLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS-----GQLVDSIAKTRDAGCRPYM 192

Query: 517 APE----LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           APE     A        +DV++ G+ L E+ATGR P    +
Sbjct: 193 APERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN 233

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 93.1 bits (232), Expect = 7e-21
 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 36/207 (17%)

Query: 364 FKQSEVIGTGGFGEVYK---------------------GVLPTRMREFAAEIESLGRLRH 402
           + + + +G G +  VYK                     G   T +RE    +  L  L+H
Sbjct: 4   YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIRE----VSLLKDLKH 59

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            ++V L      ++ L LV++Y+    L   L D+   +++       +  +  GL Y H
Sbjct: 60  ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCH 117

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL-- 520
            +    V+HRD+K  N+LI+     +L DFGLAR       ++   VV T+ Y  P++  
Sbjct: 118 RQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILL 173

Query: 521 -ARTGKASCSTDVFAYGVLLLEIATGR 546
            +     S   D++  G +  E+ATGR
Sbjct: 174 GST--DYSTQIDMWGVGCIFYEMATGR 198

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 92.2 bits (230), Expect = 8e-21
 Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 37/200 (18%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------------EIESLGRLRHKHL 405
           E +G+G F  V K       +E+AA                      E+  L  +RH ++
Sbjct: 11  EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHE 463
           + L    + K D++L+ + +  G L    FD   E   L+ ++    +K I  G+ YLH 
Sbjct: 71  ITLHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTEDEATQFLKQILDGVHYLHS 126

Query: 464 EWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
              + + H D+K  N+++      +   +L DFG+A   + G      N+ GT  ++APE
Sbjct: 127 ---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFVAPE 181

Query: 520 LARTGKASCSTDVFAYGVLL 539
           +          D+++ GV+ 
Sbjct: 182 IVNYEPLGLEADMWSIGVIT 201

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 93.5 bits (232), Expect = 1e-20
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 45/261 (17%)

Query: 327 LIFKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL--- 383
           L+  L + ++ +    +W+   P     ++    +K      ++G G F +VY+      
Sbjct: 30  LLSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDL 89

Query: 384 ---------------PTRMREFAAEIESLGRLR---HKHLVNLQGWCKRKRDLLLVYDYI 425
                          P    EF    + + RL+       +        +   +LV +  
Sbjct: 90  NDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELY 149

Query: 426 PNGSLDSLLFDNENF---VLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI- 481
             G+L + +   +N    V+      +    +   +  +H   +  +IH D+K  N ++ 
Sbjct: 150 SYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILG 206

Query: 482 ----------DADMNARLGDFGLA---RLFDHGKISHTTNVVGTIGYIAPELARTGKA-S 527
                     D      L D G +   +LF  G I        T G+   E+  + K  +
Sbjct: 207 NGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTA--KCETSGFQCVEM-LSNKPWN 263

Query: 528 CSTDVFAYGVLLLEIATGRRP 548
              D F     +  +  G   
Sbjct: 264 YQIDYFGVAATVYCMLFGTYM 284

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 94.8 bits (236), Expect = 1e-20
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 29/214 (13%)

Query: 361 TKGFKQSEVIGTGGFGEVYKGV-----------------LPTRMRE-FAAEIESLGRLRH 402
           ++ +++ + +G+G +GEV                     + T        E+  L  L H
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            +++ L  + + KR+  LV +    G L   +     F  +      IIK + +G+ YLH
Sbjct: 96  PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF--NEVDAAVIIKQVLSGVTYLH 153

Query: 463 EEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
              +  ++HRD+K  N+L+   + D   ++ DFGL+ +F++ K       +GT  YIAPE
Sbjct: 154 ---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE--RLGTAYYIAPE 208

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           + R  K     DV++ GV+L  +  G  P     
Sbjct: 209 VLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT 241

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 92.3 bits (230), Expect = 1e-20
 Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 37/210 (17%)

Query: 364 FKQSEVIGTGGFGEVYK---------------------GVLPTRMREFAAEIESLGRLRH 402
           FKQ E +G G +  VYK                     G   T +RE    I  +  L+H
Sbjct: 7   FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIRE----ISLMKELKH 62

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPN---GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
           +++V L      +  L LV++++ N     +DS    N    L           +  GL 
Sbjct: 63  ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           + HE     ++HRD+K  N+LI+     +LGDFGLAR F     + ++ VV T+ Y AP+
Sbjct: 123 FCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPD 178

Query: 520 L---ARTGKASCSTDVFAYGVLLLEIATGR 546
           +   +RT   S S D+++ G +L E+ TG+
Sbjct: 179 VLMGSRT--YSTSIDIWSCGCILAEMITGK 206

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 92.6 bits (231), Expect = 1e-20
 Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 44/220 (20%)

Query: 364 FKQSEVIGTGGFGEVYK-------------------------GVLPTRMREFAAEIESLG 398
           +++ + +G G F  VYK                         G+  T +RE    I+ L 
Sbjct: 12  YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE----IKLLQ 67

Query: 399 RLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
            L H +++ L      K ++ LV+D++    L+ ++  + + VL+       +     GL
Sbjct: 68  ELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVII-KDNSLVLTPSHIKAYMLMTLQGL 125

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            YLH+ W   ++HRD+K  N+L+D +   +L DFGLA+ F     ++T  VV T  Y AP
Sbjct: 126 EYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVV-TRWYRAP 181

Query: 519 EL---ARTGKASCSTDVFAYGVLLLEIATGRRPI---DSD 552
           EL   AR        D++A G +L E+   R P    DSD
Sbjct: 182 ELLFGAR--MYGVGVDMWAVGCILAELLL-RVPFLPGDSD 218

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 92.8 bits (231), Expect = 2e-20
 Identities = 56/216 (25%), Positives = 84/216 (38%), Gaps = 37/216 (17%)

Query: 364 FKQSEVIGTGGFGEVY-----------------KGVLPTRMRE--FAAEIESLGRLRHKH 404
           ++  +VIG G FGEV                  K  +  R     F  E + +       
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLL----FDNENFVLSWEQRFNIIKGIAAGLLY 460
           +V L    +  R L +V +Y+P G L +L+       +        RF   + +   L  
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WARFYTAE-VVLALDA 183

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE- 519
           +H       IHRDVK  N+L+D   + +L DFG     +   +      VGT  YI+PE 
Sbjct: 184 IHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240

Query: 520 LARTGKASC---STDVFAYGVLLLEIATGRRPIDSD 552
           L   G         D ++ GV L E+  G  P  +D
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 276

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 91.5 bits (228), Expect = 3e-20
 Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 37/200 (18%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------------EIESLGRLRHKHL 405
           E +G+G F  V K    +   ++AA                      E+  L  ++H ++
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHE 463
           + L    + K D++L+ + +  G L    FD   E   L+ E+    +K I  G+ YLH 
Sbjct: 77  ITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132

Query: 464 EWEQVVIHRDVKSGNVLI----DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
                + H D+K  N+++          ++ DFGLA   D G      N+ GT  ++APE
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPE 187

Query: 520 LARTGKASCSTDVFAYGVLL 539
           +          D+++ GV+ 
Sbjct: 188 IVNYEPLGLEADMWSIGVIT 207

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 91.6 bits (228), Expect = 3e-20
 Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 44/224 (19%)

Query: 340 ILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA------- 392
           ++ D+ +D  +R   SD +           +G G    VY+       + +A        
Sbjct: 37  LVPDYWIDGSNRDALSDFFEV------ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV 90

Query: 393 -------EIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD----NENFV 441
                  EI  L RL H +++ L+   +   ++ LV + +  G     LFD       + 
Sbjct: 91  DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGE----LFDRIVEKGYY- 145

Query: 442 LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLF 498
            S     + +K I   + YLH   E  ++HRD+K  N+L      D   ++ DFGL+++ 
Sbjct: 146 -SERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201

Query: 499 DHGKISHTTNVVGTIGYIAPE-LART--GKASCSTDVFAYGVLL 539
           +H  +  T  V GT GY APE L     G      D+++ G++ 
Sbjct: 202 EHQVLMKT--VCGTPGYCAPEILRGCAYGPEV---DMWSVGIIT 240

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 92.1 bits (229), Expect = 5e-20
 Identities = 54/233 (23%), Positives = 86/233 (36%), Gaps = 51/233 (21%)

Query: 348 CPHRFRYSDLYTA-----TKGFKQ----SEVIGTGGFGEVYKGV---------------- 382
               F + DL         K  +     S+ +G+G  GEV                    
Sbjct: 112 RNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKR 171

Query: 383 --------LPTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL 434
                             EIE L +L H  ++ ++ +     D  +V + +  G     L
Sbjct: 172 KFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGE----L 226

Query: 435 FDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARL 489
           FD    N  L           +   + YLH   E  +IHRD+K  NVL+   + D   ++
Sbjct: 227 FDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKI 283

Query: 490 GDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTGKASCST--DVFAYGVLL 539
            DFG +++     +  T  + GT  Y+APE L   G A  +   D ++ GV+L
Sbjct: 284 TDFGHSKILGETSLMRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 92.4 bits (230), Expect = 6e-20
 Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 30/210 (14%)

Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------------EIESLGRLR 401
           +  +K   V+G G FGEV         +E A                    E++ L +L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H +++ L  + + K    LV +    G L   +   + F  S      II+ + +G+ Y+
Sbjct: 85  HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGITYM 142

Query: 462 HEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           H   +  ++HRD+K  N+L+     D N R+ DFGL+  F+  K       +GT  YIAP
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYIAP 197

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           E+   G      DV++ GV+L  + +G  P
Sbjct: 198 EVLH-GTYDEKCDVWSTGVILYILLSGCPP 226

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 89.7 bits (223), Expect = 9e-20
 Identities = 43/219 (19%), Positives = 79/219 (36%), Gaps = 41/219 (18%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-----------------PTRMREFAAEIESLGRL-RHKHL 405
            +    +G+G  G+V+K                        +    +++ + +     ++
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI 86

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF---VLSWEQRFNIIKGIAAGLLYLH 462
           V   G      D+ +  + +   +              +L       +   I   L YL 
Sbjct: 87  VQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLK 141

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT---TNVVGTIGYIAPE 519
           E  +  VIHRDVK  N+L+D     +L DFG++     G++          G   Y+APE
Sbjct: 142 E--KHGVIHRDVKPSNILLDERGQIKLCDFGIS-----GRLVDDKAKDRSAGCAAYMAPE 194

Query: 520 -----LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
                           DV++ G+ L+E+ATG+ P  +  
Sbjct: 195 RIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK 233

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 88.4 bits (220), Expect = 1e-19
 Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 36/202 (17%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGRLRHKHLV 406
           F     +G+G FG+V+                        M +  AEIE L  L H +++
Sbjct: 24  FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLLY 460
            +    +   ++ +V +    G     L +      +  +  +      ++K +   L Y
Sbjct: 84  KIFEVFEDYHNMYIVMETCEGGE----LLERIVSAQARGKALSEGYVAELMKQMMNALAY 139

Query: 461 LHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            H    Q V+H+D+K  N+L          ++ DFGLA LF   + S      GT  Y+A
Sbjct: 140 FH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN--AAGTALYMA 194

Query: 518 PELARTGKASCSTDVFAYGVLL 539
           PE+ +    +   D+++ GV++
Sbjct: 195 PEVFK-RDVTFKCDIWSAGVVM 215

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 91.0 bits (226), Expect = 1e-19
 Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 30/214 (14%)

Query: 364 FKQSEVIGTGGFGEVY-----------------KGVLPTRMRE---FAAEIESLGRLRHK 403
           F+  +VIG G FGEV                  K  +  +  E   F  E + L     K
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDSK 134

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
            +  L    +   +L LV DY   G L +LL   E+ +     RF + + +   +  +H+
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE-MVIAIDSVHQ 193

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
                 +HRD+K  N+L+D + + RL DFG            ++  VGT  YI+PE+ + 
Sbjct: 194 ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250

Query: 524 GKASCST-----DVFAYGVLLLEIATGRRPIDSD 552
            +          D ++ GV + E+  G  P  ++
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 88.9 bits (221), Expect = 1e-19
 Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 47/218 (21%)

Query: 360 ATKGFKQ----SEVIGTGGFGEVYKGVLPTRMREFAA----------------------- 392
           +T GF +     E++G G    V + +     +E+A                        
Sbjct: 11  STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70

Query: 393 --EIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQR 447
             E++ L ++  H +++ L+   +      LV+D +  G L    FD   E   LS ++ 
Sbjct: 71  LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKET 126

Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT 507
             I++ +   +  LH+     ++HRD+K  N+L+D DMN +L DFG +   D G+     
Sbjct: 127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE- 182

Query: 508 NVVGTIGYIAPELARTGKASCST------DVFAYGVLL 539
            V GT  Y+APE+                D+++ GV++
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113

 Score = 83.4 bits (206), Expect = 1e-19
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 17/119 (14%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F  F+  + +  LI +  A+    +  L++T             G   Y+ P+++ + 
Sbjct: 6   FSFTKFDPNQED--LIFQGHATS--TNNVLQVTKLDSAGNPVSSSAGRVLYSAPLRLWED 61

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTN 139
           S         +SF T   F+I TP + +   GLAF ++P  S        +LG+  + N
Sbjct: 62  SA------VLTSFDTIINFEISTPYTSRIADGLAFFIAPPDSVISYHGG-FLGLFPNAN 113

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 88.8 bits (221), Expect = 2e-19
 Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 43/213 (20%)

Query: 364 FKQSEVIGTGGFGEVYK----------------------GVLPTRMREFAAEIESLGRLR 401
           +++   +G G +GEVYK                      GV  T +RE    +  L  L+
Sbjct: 36  YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE----VSLLKELQ 91

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H++++ L+        L L+++Y  N  L   +  N +  +   + F  +  +  G+ + 
Sbjct: 92  HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSF--LYQLINGVNFC 148

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNAR-----LGDFGLARLFDHGKISHTTNVVGTIGYI 516
           H       +HRD+K  N+L+     +      +GDFGLAR F       T  ++ T+ Y 
Sbjct: 149 HSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYR 204

Query: 517 APEL---ARTGKASCSTDVFAYGVLLLEIATGR 546
            PE+   +R    S S D+++   +  E+    
Sbjct: 205 PPEILLGSRH--YSTSVDIWSIACIWAEMLMKT 235

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 89.3 bits (222), Expect = 2e-19
 Identities = 52/205 (25%), Positives = 79/205 (38%), Gaps = 44/205 (21%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA---------------------EIESLGRLRHKHLV 406
           EVIG G F  V + +     ++FA                      E      L+H H+V
Sbjct: 30  EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFD------NENFVLSWEQRFNIIKGIAAGLLY 460
            L         L +V++++        L        +  FV S     + ++ I   L Y
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGAD----LCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145

Query: 461 LHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
            H   +  +IHRDVK   VL+   +     +LG FG+A       +      VGT  ++A
Sbjct: 146 CH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG-RVGTPHFMA 201

Query: 518 PE-LART--GKASCSTDVFAYGVLL 539
           PE + R   GK     DV+  GV+L
Sbjct: 202 PEVVKREPYGKPV---DVWGCGVIL 223

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 90.2 bits (224), Expect = 2e-19
 Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 30/215 (13%)

Query: 364 FKQSEVIGTGGFGEVY-----------------KGVLPTRMRE--FAAEIESLGRLRHKH 404
           F+  +VIG G F EV                  K  +  R     F  E + L     + 
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +  L    + +  L LV +Y   G L +LL      + +   RF + + I   +  +H  
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAE-IVMAIDSVHR- 180

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LART 523
                +HRD+K  N+L+D   + RL DFG            +   VGT  Y++PE L   
Sbjct: 181 --LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238

Query: 524 GKASCST------DVFAYGVLLLEIATGRRPIDSD 552
           G    +       D +A GV   E+  G+ P  +D
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 88.5 bits (220), Expect = 2e-19
 Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 32/206 (15%)

Query: 370 IGTGGFGEVYKGV------------------LPTRMREFAAEIESLGRLRHKHLVNLQGW 411
           IG G F +V                       PT +++   E+  +  L H ++V L   
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
            + ++ L L+ +Y   G +    FD    +  +  ++  +  + I + + Y H+   + +
Sbjct: 83  IETEKTLYLIMEYASGGEV----FDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRI 135

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK--AS 527
           +HRD+K+ N+L+DADMN ++ DFG +  F  G         G   Y APEL + GK    
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF--CGAPPYAAPELFQ-GKKYDG 192

Query: 528 CSTDVFAYGVLLLEIATGRRPIDSDH 553
              DV++ GV+L  + +G  P D  +
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQN 218

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 87.6 bits (218), Expect = 3e-19
 Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 42/209 (20%)

Query: 361 TKGFKQ----SEVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLG 398
           +  F       E +G G F  V + V  T   EFAA                  E     
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60

Query: 399 RLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAA 456
           +L+H ++V L    + +    LV+D +  G     LF++       S     + I+ I  
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILE 116

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
            + Y H      ++HR++K  N+L+         +L DFGLA   +  +  H     GT 
Sbjct: 117 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTP 171

Query: 514 GYIAPE-LART--GKASCSTDVFAYGVLL 539
           GY++PE L +    K     D++A GV+L
Sbjct: 172 GYLSPEVLKKDPYSKPV---DIWACGVIL 197

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 87.6 bits (218), Expect = 3e-19
 Identities = 53/193 (27%), Positives = 78/193 (40%), Gaps = 31/193 (16%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHLVNLQGW 411
             IG G +GEV   V        AA                EIE +  L H +++ L   
Sbjct: 15  NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
            +   D+ LV +    G     LF+      V        I+K + + + Y H   +  V
Sbjct: 75  FEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNV 127

Query: 470 IHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
            HRD+K  N L      D   +L DFGLA  F  GK+  T   VGT  Y++P++   G  
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT--KVGTPYYVSPQVLE-GLY 184

Query: 527 SCSTDVFAYGVLL 539
               D ++ GV++
Sbjct: 185 GPECDEWSAGVMM 197

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 88.6 bits (220), Expect = 3e-19
 Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 35/216 (16%)

Query: 368 EVIGTGGFGEVYKG------------------VLPTRMREFAA------EIESLGRLRHK 403
             +G+G FG V+                    VL     E         EI  L R+ H 
Sbjct: 30  SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYL 461
           +++ +    + +    LV +   +G LD  LF   + +  L       I + + + + YL
Sbjct: 90  NIIKVLDIFENQGFFQLVMEKHGSG-LD--LFAFIDRHPRLDEPLASYIFRQLVSAVGYL 146

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-L 520
                + +IHRD+K  N++I  D   +L DFG A   + GK+ +T    GTI Y APE L
Sbjct: 147 RL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF--CGTIEYCAPEVL 201

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
                     ++++ GV L  +     P       +
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV 237

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 88.7 bits (220), Expect = 3e-19
 Identities = 50/247 (20%), Positives = 82/247 (33%), Gaps = 69/247 (27%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA---------------------EIESLGRLRHKHLV 406
             IG G +G V   +        A                      E+  + +L H ++ 
Sbjct: 32  GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSL------------------------------------ 430
            L    + ++ + LV +    G L                                    
Sbjct: 92  RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151

Query: 431 --DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR 488
                  ++ +FV   +   NI++ I + L YLH    Q + HRD+K  N L   + +  
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFE 208

Query: 489 L--GDFGLARLFDHGKISHT---TNVVGTIGYIAPELARTGKAS--CSTDVFAYGVLLLE 541
           +   DFGL++ F           T   GT  ++APE+  T   S     D ++ GVLL  
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268

Query: 542 IATGRRP 548
           +  G  P
Sbjct: 269 LLMGAVP 275

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 87.6 bits (218), Expect = 3e-19
 Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 41/198 (20%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHLVNLQGW 411
           EV+G+G F EV+        + FA                 EI  L +++H+++V L+  
Sbjct: 15  EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFD----NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
            +      LV   +  G     LFD       +  + +    +I+ + + + YLH   E 
Sbjct: 75  YESTTHYYLVMQLVSGGE----LFDRILERGVY--TEKDASLVIQQVLSAVKYLH---EN 125

Query: 468 VVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LART 523
            ++HRD+K  N+L    + +    + DFGL+++  +G +   +   GT GY+APE LA+ 
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM---STACGTPGYVAPEVLAQK 182

Query: 524 --GKASCSTDVFAYGVLL 539
              KA    D ++ GV+ 
Sbjct: 183 PYSKAV---DCWSIGVIT 197

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 88.2 bits (219), Expect = 3e-19
 Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 37/217 (17%)

Query: 368 EVIGTGGFGEVYKGV-LPT------------RMREFAA---------EIESLGRLRHK-- 403
            ++G+GGFG VY G+ +              R+ ++           E+  L ++     
Sbjct: 49  PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 108

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYL 461
            ++ L  W +R    +L+ +  P    D  LFD   E   L  E   +    +   + + 
Sbjct: 109 GVIRLLDWFERPDSFVLILER-PEPVQD--LFDFITERGALQEELARSFFWQVLEAVRHC 165

Query: 462 HEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           H      V+HRD+K  N+LID +    +L DFG   L             GT  Y  PE 
Sbjct: 166 HN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY-TDF--DGTRVYSPPEW 219

Query: 521 ARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
            R  +    S  V++ G+LL ++  G  P + D  I+
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 256

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 88.2 bits (219), Expect = 4e-19
 Identities = 50/218 (22%), Positives = 86/218 (39%), Gaps = 46/218 (21%)

Query: 349 PHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA-----------EIESL 397
           P ++  +D Y  +K     +V+G G  G+V +       ++ A            E++  
Sbjct: 21  PKKYAVTDDYQLSK-----QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHH 75

Query: 398 GRL-RHKHLVNLQGWC----KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN--- 449
            +     H+V +          KR LL++ + +  G L    F         +Q F    
Sbjct: 76  WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGEL----FSR--IQERGDQAFTERE 129

Query: 450 ---IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKI 503
              I++ I   + +LH      + HRDVK  N+L    + D   +L DFG A+      +
Sbjct: 130 AAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL 186

Query: 504 SHTTNVVGTIGYIAPE-LARTG-KASCSTDVFAYGVLL 539
                   T  Y+APE L       SC  D+++ GV++
Sbjct: 187 ---QTPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIM 219

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 88.5 bits (220), Expect = 4e-19
 Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 38/198 (19%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHLVNLQ 409
           E +G G F  V + V  T   EFAA                  E     +L+H ++V L 
Sbjct: 35  EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
              + +    LV+D +  G L    F+        S     + I+ I   + Y H     
Sbjct: 95  DSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIAYCHS---N 147

Query: 468 VVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LART 523
            ++HR++K  N+L+         +L DFGLA   +  +  H     GT GY++PE L + 
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKD 205

Query: 524 --GKASCSTDVFAYGVLL 539
              K     D++A GV+L
Sbjct: 206 PYSKPV---DIWACGVIL 220

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 88.1 bits (219), Expect = 4e-19
 Identities = 58/255 (22%), Positives = 95/255 (37%), Gaps = 50/255 (19%)

Query: 329 FKLYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMR 388
            K +   A+ + L+ WE    +  +          F + + +GTG FG V          
Sbjct: 15  VKEFLAKAKEDFLKKWETPSQNTAQLDQ-------FDRIKTLGTGSFGRVMLVKHKESGN 67

Query: 389 EFA-------------------AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS 429
            +A                    E   L  +    LV L+   K   +L +V +Y+  G 
Sbjct: 68  HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE 127

Query: 430 LDSLLFDNENFVLSWEQRFNIIKG------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDA 483
           +    F      L    RF+          I     YLH      +I+RD+K  N+LID 
Sbjct: 128 M----F----SHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176

Query: 484 DMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
               ++ DFG A+     ++   T  + GT   +APE+  +   + + D +A GVL+ E+
Sbjct: 177 QGYIQVTDFGFAK-----RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM 231

Query: 543 ATGRRP-IDSDHFIL 556
           A G  P        +
Sbjct: 232 AAGYPPFFADQPIQI 246

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 89.7 bits (223), Expect = 5e-19
 Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 33/208 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMRE-FAAEIESLGRLRHKHL 405
           +    ++G G FGEV K                      +       E+E L +L H ++
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHE 463
           + L    +      +V +    G L    FD   +    S      IIK + +G+ Y+H+
Sbjct: 84  MKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139

Query: 464 EWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
                ++HRD+K  N+L+   + D + ++ DFGL+  F           +GT  YIAPE+
Sbjct: 140 ---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEV 194

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRP 548
            R G      DV++ GV+L  + +G  P
Sbjct: 195 LR-GTYDEKCDVWSAGVILYILLSGTPP 221

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 87.6 bits (218), Expect = 5e-19
 Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 36/214 (16%)

Query: 364 FKQSEVIGTGGFGEVYK-----------------------GVLPTRMREFAAEIESLGRL 400
           ++    IG G +G+V+K                       G+  + +RE A  +  L   
Sbjct: 13  YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETF 71

Query: 401 RHKHLVNLQ-----GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
            H ++V L          R+  L LV++++    L + L       +  E   +++  + 
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL 130

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
            GL +LH      V+HRD+K  N+L+ +    +L DFGLAR++   +++ T+ VV T+ Y
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF-QMALTSVVV-TLWY 185

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
            APE+      +   D+++ G +  E+   R+P+
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 89.4 bits (222), Expect = 7e-19
 Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 40/213 (18%)

Query: 368 EVIGTGGFGEVYKGV-----------------------------LPTRMREFAAEIESLG 398
             +G+G +GEV                                 +     E   EI  L 
Sbjct: 42  RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101

Query: 399 RLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGL 458
            L H +++ L    + K+   LV ++   G L   + +   F        NI+K I +G+
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF--DECDAANIMKQILSGI 159

Query: 459 LYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGY 515
            YLH+     ++HRD+K  N+L+   ++ +N ++ DFGL+  F           +GT  Y
Sbjct: 160 CYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD--RLGTAYY 214

Query: 516 IAPELARTGKASCSTDVFAYGVLLLEIATGRRP 548
           IAPE+ +  K +   DV++ GV++  +  G  P
Sbjct: 215 IAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPP 246

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 87.3 bits (217), Expect = 9e-19
 Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 35/196 (17%)

Query: 367 SEVIGTGGFGEVYKGV------------LPTRMREFAAEIESLGRL-RHKHLVNLQGWCK 413
            E IG G +    + +            +    R+   EIE L R  +H +++ L+    
Sbjct: 27  KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYD 86

Query: 414 RKRDLLLVYDYIPNGSLDSLLFD----NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
             + + +V + +  G     L D     + F  S  +   ++  I   + YLH    Q V
Sbjct: 87  DGKYVYVVTELMKGGE----LLDKILRQKFF--SEREASAVLFTITKTVEYLH---AQGV 137

Query: 470 IHRDVKSGNVL-IDADMNA---RLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTG 524
           +HRD+K  N+L +D   N    R+ DFG A+          T    T  ++APE L R G
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLERQG 196

Query: 525 -KASCSTDVFAYGVLL 539
             A+C  D+++ GVLL
Sbjct: 197 YDAAC--DIWSLGVLL 210

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 86.9 bits (216), Expect = 9e-19
 Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 34/208 (16%)

Query: 355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA------------------EIES 396
           ++ Y  T      + +G G F  V + +  +  +E+AA                  EI  
Sbjct: 27  NNFYILTS-----KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAV 81

Query: 397 LGRLRH-KHLVNLQGWCKRKRDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGI 454
           L   +    ++NL    +   +++L+ +Y   G +    L +     +S      +IK I
Sbjct: 82  LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEM-VSENDVIRLIKQI 140

Query: 455 AAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVG 511
             G+ YLH   +  ++H D+K  N+L+       + ++ DFG++R   H        ++G
Sbjct: 141 LEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE--LREIMG 195

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLL 539
           T  Y+APE+      + +TD++  G++ 
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIA 223

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 86.2 bits (214), Expect = 1e-18
 Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 59/226 (26%)

Query: 368 EVIGTGGFGEVYKGV-LPT------------RMREFAA-------EIESLGRLRHKHLVN 407
           +++G G +G+V + +   T            ++R           EI+ L RLRHK+++ 
Sbjct: 11  DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70

Query: 408 LQG--WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------------ 453
           L    + + K+ + +V +Y   G  +  + D+            + +             
Sbjct: 71  LVDVLYNEEKQKMYMVMEYCVCGMQE--MLDS------------VPEKRFPVCQAHGYFC 116

Query: 454 -IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS---HTTNV 509
            +  GL YLH    Q ++H+D+K GN+L+      ++   G+A             T+  
Sbjct: 117 QLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-- 171

Query: 510 VGTIGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDH 553
            G+  +  PE+A      +    D+++ GV L  I TG  P + D+
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 85.7 bits (213), Expect = 1e-18
 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 41/199 (20%)

Query: 368 EVIGTGGFGEVYKGV-----------------LPTRMRE-FAAEIESLGRLRHKHLVNLQ 409
            ++G G FGEV K                      +       E+E L +L H +++ L 
Sbjct: 28  CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFD----NENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
              +      +V +    G     LFD     + F  S      IIK + +G+ Y+H   
Sbjct: 88  EILEDSSSFYIVGELYTGGE----LFDEIIKRKRF--SEHDAARIIKQVFSGITYMH--- 138

Query: 466 EQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LA 521
           +  ++HRD+K  N+L+   + D + ++ DFGL+  F           +GT  YIAPE L 
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEVLR 196

Query: 522 RT-GKASCSTDVFAYGVLL 539
            T  +     DV++ GV+L
Sbjct: 197 GTYDEKC---DVWSAGVIL 212

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 85.8 bits (213), Expect = 2e-18
 Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 42/208 (20%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA------------------------EIESLGR 399
           +  S+ +G+G  GEV         ++ A                         EIE L +
Sbjct: 12  YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71

Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAG 457
           L H  ++ ++ +     D  +V + +  G     LFD    N  L           +   
Sbjct: 72  LNHPCIIKIKNFFD-AEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQMLLA 126

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
           + YLH   E  +IHRD+K  NVL+   + D   ++ DFG +++     +  T  + GT  
Sbjct: 127 VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPT 181

Query: 515 YIAPE-LARTGKASCST--DVFAYGVLL 539
           Y+APE L   G A  +   D ++ GV+L
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVIL 209

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 86.3 bits (214), Expect = 2e-18
 Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 42/205 (20%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA------------------------EIESLGRLR-H 402
           +VIG G    V + V      EFA                         E   L ++  H
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLY 460
            H++ L    +    + LV+D +  G L    FD   E   LS ++  +I++ +   + +
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETRSIMRSLLEAVSF 215

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           LH      ++HRD+K  N+L+D +M  RL DFG +   + G+      + GT GY+APE+
Sbjct: 216 LHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE--LCGTPGYLAPEI 270

Query: 521 ARTGKASCST------DVFAYGVLL 539
            +              D++A GV+L
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVIL 295

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 84.6 bits (210), Expect = 3e-18
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 31/208 (14%)

Query: 368 EVIGTGGFGEVYKG------------------VLPTRMRE-FAAEIESLGRLRHKHLVNL 408
           + +G G FG+V  G                  +    +      EI++L   RH H++ L
Sbjct: 17  DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
                   D  +V +Y+  G L    FD   ++  +   +   + + I + + Y H    
Sbjct: 77  YQVISTPTDFFMVMEYVSGGEL----FDYICKHGRVEEMEARRLFQQILSAVDYCHR--- 129

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTGK 525
            +V+HRD+K  NVL+DA MNA++ DFGL+ +   G+   T+   G+  Y APE ++    
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVISGRLY 187

Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           A    D+++ GV+L  +  G  P D +H
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEH 215

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 84.9 bits (211), Expect = 3e-18
 Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 38/216 (17%)

Query: 364 FKQSEVIGTGGFGEVYK-------------------------GVLPTRMREFAAEIESLG 398
           ++    IG G +G VYK                         G+  + +RE A  +  L 
Sbjct: 11  YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL-LRRLE 69

Query: 399 RLRHKHLVNLQ-----GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
              H ++V L          R+  + LV++++    L + L       L  E   ++++ 
Sbjct: 70  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 128

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
              GL +LH      ++HRD+K  N+L+ +    +L DFGLAR++ + +++ T  VV T+
Sbjct: 129 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY-QMALTPVVV-TL 183

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPI 549
            Y APE+      +   D+++ G +  E+   R+P+
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 84.0 bits (208), Expect = 4e-18
 Identities = 23/204 (11%), Positives = 49/204 (24%), Gaps = 54/204 (26%)

Query: 368 EVIGTGGFGEVYKG------------VL-------PTRMREFAAEIESLGRLRHKHLVNL 408
              G     + ++              +          ++E  +    L R+    +  +
Sbjct: 37  IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV 96

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
                 +   L+V ++I  GSL  +   +     S       ++ +AA     H      
Sbjct: 97  LDVVHTRAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG--- 149

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASC 528
           V         V +  D +  L                          +     +      
Sbjct: 150 VALSIDHPSRVRVSIDGDVVLAYP---------------------ATMPDANPQ------ 182

Query: 529 STDVFAYGVLLLEIATGRRPIDSD 552
             D+   G  L  +   R P+   
Sbjct: 183 -DDIRGIGASLYALLVNRWPLPEA 205

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 84.9 bits (211), Expect = 4e-18
 Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 45/221 (20%)

Query: 364 FKQSEVIGTGGFGEVY-----------------KGVLPTRMREFA---AEIESLGRLRHK 403
           F+    +GTG FG V+                 K ++  R+++      E   L  + H 
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-VRLKQVEHTNDERLMLSIVTHP 66

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAG 457
            ++ + G  +  + + ++ DYI  G L    F     +L   QRF           +   
Sbjct: 67  FIIRMWGTFQDAQQIFMIMDYIEGGEL----F----SLLRKSQRFPNPVAKFYAAEVCLA 118

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYI 516
           L YLH    + +I+RD+K  N+L+D + + ++ DFG A+      +   T  + GT  YI
Sbjct: 119 LEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAK-----YVPDVTYTLCGTPDYI 170

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRP-IDSDHFIL 556
           APE+  T   + S D +++G+L+ E+  G  P  DS+    
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT 211

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 84.6 bits (210), Expect = 6e-18
 Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 35/197 (17%)

Query: 366 QSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLR-HKHLVNLQGW 411
           + + +G G F    K V     + FA              EI +L     H ++V L   
Sbjct: 15  KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEV 74

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFD----NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
              +    LV + +  G     LF+     ++F  S  +   I++ + + + ++H   + 
Sbjct: 75  FHDQLHTFLVMELLNGGE----LFERIKKKKHF--SETEASYIMRKLVSAVSHMH---DV 125

Query: 468 VVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LART 523
            V+HRD+K  N+L    + ++  ++ DFG ARL         T    T+ Y APE L + 
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT-PCFTLHYAAPELLNQN 184

Query: 524 G-KASCSTDVFAYGVLL 539
           G   SC  D+++ GV+L
Sbjct: 185 GYDESC--DLWSLGVIL 199

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 85.8 bits (213), Expect = 6e-18
 Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 41/200 (20%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA------------------EIESLGRLRHKHLVNLQ 409
           E +G G F  V + V     +E+AA                  E      L+H ++V L 
Sbjct: 17  EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFD----NENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
                +    L++D +  G L    F+     E +  S     + I+ I   +L+ H+  
Sbjct: 77  DSISEEGHHYLIFDLVTGGEL----FEDIVAREYY--SEADASHCIQQILEAVLHCHQ-- 128

Query: 466 EQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LA 521
              V+HR++K  N+L+         +L DFGLA   +  + +      GT GY++PE L 
Sbjct: 129 -MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-FAGTPGYLSPEVLR 186

Query: 522 RT--GKASCSTDVFAYGVLL 539
           +   GK     D++A GV+L
Sbjct: 187 KDPYGKPV---DLWACGVIL 203

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 83.9 bits (208), Expect = 9e-18
 Identities = 52/219 (23%), Positives = 81/219 (36%), Gaps = 39/219 (17%)

Query: 368 EVIGTGGFGEVYKG------------------VLPTRMREFAA----EIESLGRLR---- 401
            ++G GGFG V+ G                  VL       +     E+  L ++     
Sbjct: 37  PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLL 459
           H  ++ L  W + +   +LV +       D  LFD   E   L           + A + 
Sbjct: 97  HPGVIRLLDWFETQEGFMLVLERPLPAQ-D--LFDYITEKGPLGEGPSRCFFGQVVAAIQ 153

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
           + H    + V+HRD+K  N+LID      +L DFG   L             GT  Y  P
Sbjct: 154 HCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY-TDF--DGTRVYSPP 207

Query: 519 ELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL 556
           E     +  +    V++ G+LL ++  G  P + D  IL
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL 246

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 82.2 bits (204), Expect = 2e-17
 Identities = 54/217 (24%), Positives = 83/217 (38%), Gaps = 52/217 (23%)

Query: 370 IGTGGFGEVYKGV-LPTRMREFAA------------------EIESLGRLRHKHLVNLQG 410
           +G G +GEV   V   T   E  A                  EI     L H+++V   G
Sbjct: 15  LGEGAYGEVQLAVNRVTE--EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72

Query: 411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN----------IIKGIAAGLLY 460
             +      L  +Y   G L    FD     +  +              ++ G+     Y
Sbjct: 73  HRREGNIQYLFLEYCSGGEL----FDR----IEPDIGMPEPDAQRFFHQLMAGVV----Y 120

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS---HTTNVVGTIGYIA 517
           LH      + HRD+K  N+L+D   N ++ DFGLA +F +       +     GT+ Y+A
Sbjct: 121 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVA 175

Query: 518 PE-LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           PE L R    +   DV++ G++L  +  G  P D   
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 82.8 bits (205), Expect = 4e-17
 Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 39/210 (18%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPT-------RMREFAA----EIESLGRLRHKHLVNL---- 408
           +   +VIG G FG V++  L         ++ +       E++ +  ++H ++V+L    
Sbjct: 42  YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFF 101

Query: 409 --QGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKG----IAAGLLY 460
              G  K +  L LV +Y+P  ++      +      +        IK     +   L Y
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLL----IKLYMYQLLRSLAY 156

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           +H      + HRD+K  N+L+D      +L DFG A++   G+ +   + + +  Y APE
Sbjct: 157 IHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSYICSRYYRAPE 211

Query: 520 L---ARTGKASCSTDVFAYGVLLLEIATGR 546
           L   A     + + D+++ G ++ E+  G+
Sbjct: 212 LIFGAT--NYTTNIDIWSTGCVMAELMQGQ 239

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 83.7 bits (207), Expect = 4e-17
 Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 43/214 (20%)

Query: 368 EVIGTGGFGEVYKG------------------VLPTRMRE-FAAEIESLGRLRHKHLVNL 408
           + +G G FG+V  G                  +    +      EI++L   RH H++ L
Sbjct: 22  DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFD--------NENFVLSWEQRFNIIKGIAAGLLY 460
                   D+ +V +Y+  G L    FD        +E      E R  + + I +G+ Y
Sbjct: 82  YQVISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEK-----ESR-RLFQQILSGVDY 131

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE- 519
            H     +V+HRD+K  NVL+DA MNA++ DFGL+ +   G+   T+   G+  Y APE 
Sbjct: 132 CHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEV 186

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           ++    A    D+++ GV+L  +  G  P D DH
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 82.5 bits (204), Expect = 6e-17
 Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 36/198 (18%)

Query: 367 SEVIGTGGFGEVYKGVLPTRMREFAA-----------EIESLGRL-RHKHLVNLQGWC-- 412
           S+V+G G  G+V +        +FA            E+E   R  +  H+V +      
Sbjct: 67  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYEN 126

Query: 413 --KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF------NIIKGIAAGLLYLHEE 464
               ++ LL+V + +  G L    F         +Q F       I+K I   + YLH  
Sbjct: 127 LYAGRKCLLIVMECLDGGEL----FSR--IQDRGDQAFTEREASEIMKSIGEAIQYLHS- 179

Query: 465 WEQVVIHRDVKSGNVL-IDADMNA--RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
               + HRDVK  N+L      NA  +L DFG A+         T     T  Y+APE+ 
Sbjct: 180 --INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEVL 235

Query: 522 RTGKASCSTDVFAYGVLL 539
              K   S D+++ GV++
Sbjct: 236 GPEKYDKSCDMWSLGVIM 253

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 80.8 bits (200), Expect = 9e-17
 Identities = 50/212 (23%), Positives = 79/212 (37%), Gaps = 48/212 (22%)

Query: 370 IGTGGFGEVY-----------------KGVLPTRMREFAAEIESLGRLRHKHLVNLQGWC 412
           +G G +GEV                               EI     L H+++V   G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74

Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN----------IIKGIAAGLLYLH 462
           +      L  +Y   G L    FD     +  +              ++ G+     YLH
Sbjct: 75  REGNIQYLFLEYCSGGEL----FDR----IEPDIGMPEPDAQRFFHQLMAGVV----YLH 122

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS---HTTNVVGTIGYIAPE 519
                 + HRD+K  N+L+D   N ++ DFGLA +F +       +     GT+ Y+APE
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPE 177

Query: 520 -LARTGKASCSTDVFAYGVLLLEIATGRRPID 550
            L R    +   DV++ G++L  +  G  P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 80.4 bits (199), Expect = 1e-16
 Identities = 45/225 (20%), Positives = 91/225 (40%), Gaps = 55/225 (24%)

Query: 353 RYSDLYTATKGFKQSEVIGTGGFGEVYKGV-LPTRMREFAA----------------EIE 395
           R+ D+Y   +     +V+G G    V   + L T  +E+A                 E+E
Sbjct: 9   RFEDVYQLQE-----DVLGEGAHARVQTCINLITS-QEYAVKIIEKQPGHIRSRVFREVE 62

Query: 396 SLGRLR-HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN----- 449
            L + + H++++ L  + + +    LV++ +  GS    +  +    +   + FN     
Sbjct: 63  MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS----ILSH----IHKRRHFNELEAS 114

Query: 450 -IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISH 505
            +++ +A+ L +LH    + + HRD+K  N+L    +     ++ DF L           
Sbjct: 115 VVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171

Query: 506 TTN------VVGTIGYIAPELARTGKASCST-----DVFAYGVLL 539
             +        G+  Y+APE+        S      D+++ GV+L
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 80.9 bits (200), Expect = 2e-16
 Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 48/215 (22%)

Query: 369 VIGTGGFGEVY-----------------KGVLPTRMREFAAEIES-------LGRLRHKH 404
           ++G G FG+V                  K V+  +      E+         L   RH  
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKD-----EVAHTLTENRVLQNSRHPF 209

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAGL 458
           L  L+   +    L  V +Y   G L    F    F LS E+ F+  +       I + L
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGEL----F----FHLSRERVFSEDRARFYGAEIVSAL 261

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGYIA 517
            YLH E  + V++RD+K  N+++D D + ++ DFGL +     G    T    GT  Y+A
Sbjct: 262 DYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLA 317

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           PE+        + D +  GV++ E+  GR P  + 
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 80.5 bits (199), Expect = 3e-16
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 33/210 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-PT-------RMREFAA----EIESLGRLRHKHLVNL--- 408
           +  ++VIG G FG VY+  L  +       ++ +       E++ + +L H ++V L   
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 115

Query: 409 ---QGWCKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
               G  K +  L LV DY+P  ++  +   +      L        +  +   L Y+H 
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174

Query: 464 EWEQVVIHRDVKSGNVLIDADMNA-RLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL-- 520
                + HRD+K  N+L+D D    +L DFG A+    G+ +   + + +  Y APEL  
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRYYRAPELIF 229

Query: 521 -ARTGKASCSTDVFAYGVLLLEIATGRRPI 549
            A     + S DV++ G +L E+  G +PI
Sbjct: 230 GAT--DYTSSIDVWSAGCVLAELLLG-QPI 256

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 78.7 bits (195), Expect = 5e-16
 Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 43/214 (20%)

Query: 369 VIGTGGFGEVY--------------------KGVLPTRMREFA---AEIESLGRLRHKHL 405
           V+G GG+G+V+                    K ++    ++ A   AE   L  ++H  +
Sbjct: 24  VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAGLL 459
           V+L    +    L L+ +Y+  G L    F      L  E  F           I+  L 
Sbjct: 84  VDLIYAFQTGGKLYLILEYLSGGEL----F----MQLEREGIFMEDTACFYLAEISMALG 135

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGYIAP 518
           +LH+   + +I+RD+K  N++++   + +L DFGL +     G ++HT    GTI Y+AP
Sbjct: 136 HLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYMAP 190

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           E+      + + D ++ G L+ ++ TG  P   +
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 78.1 bits (193), Expect = 6e-16
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 22/171 (12%)

Query: 393 EIESLGRLRHKHLVNL-QGWCKRKRDLL-LVYDYIPNGSLDSLLFD-NENFVLSWEQRFN 449
           EI  L +L H ++V L +       D L +V++ +  G +     +      LS +Q   
Sbjct: 86  EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----MEVPTLKPLSEDQARF 141

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHTTN 508
             + +  G+ YLH    Q +IHRD+K  N+L+  D + ++ DFG++  F     +   T 
Sbjct: 142 YFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT- 197

Query: 509 VVGTIGYIAPELAR------TGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
            VGT  ++APE         +GKA    DV+A GV L     G+ P   + 
Sbjct: 198 -VGTPAFMAPESLSETRKIFSGKAL---DVWAMGVTLYCFVFGQCPFMDER 244

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 78.1 bits (193), Expect = 8e-16
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 32/208 (15%)

Query: 368 EVIGTGGFGEVYKG------------------VLPTRMRE-FAAEIESLGRLRHKHLVNL 408
           E +G G FG+V                     +  + M      EI  L  LRH H++ L
Sbjct: 15  ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
                   D+++V +Y   G L    FD   E   ++ ++     + I   + Y H    
Sbjct: 75  YDVITTPTDIVMVIEYA-GGEL----FDYIVEKKRMTEDEGRRFFQQIICAIEYCHR--- 126

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE-LARTGK 525
             ++HRD+K  N+L+D ++N ++ DFGL+ +   G    T+   G+  Y APE +     
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVINGKLY 184

Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           A    DV++ G++L  +  GR P D + 
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEF 212

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 78.5 bits (194), Expect = 8e-16
 Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 43/216 (19%)

Query: 369 VIGTGGFGEVY--------------------KGVLPTRMREFA---AEIESLGRLRHKH- 404
           V+GTG +G+V+                    K  +  + +       E + L  +R    
Sbjct: 61  VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAGL 458
           LV L    + +  L L+ DYI  G L    F      LS  +RF   +       I   L
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGEL----F----THLSQRERFTEHEVQIYVGEIVLAL 172

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP 518
            +LH+     +I+RD+K  N+L+D++ +  L DFGL++ F   +     +  GTI Y+AP
Sbjct: 173 EHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229

Query: 519 ELARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSD 552
           ++ R G +    + D ++ GVL+ E+ TG  P   D
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 77.6 bits (192), Expect = 1e-15
 Identities = 55/215 (25%), Positives = 86/215 (40%), Gaps = 49/215 (22%)

Query: 369 VIGTGGFGEVY-----------------KGVLPTRMREFAAEIES-------LGRLRHKH 404
           ++G G FG+V                  K V+  +      E+         L   RH  
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-----EVAHTVTESRVLQNTRHPF 66

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAGL 458
           L  L+   +    L  V +Y   G L    F    F LS E+ F   +       I + L
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL----F----FHLSRERVFTEERARFYGAEIVSAL 118

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGYIA 517
            YLH    + V++RD+K  N+++D D + ++ DFGL +     G    T    GT  Y+A
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLA 173

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           PE+        + D +  GV++ E+  GR P  + 
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 77.2 bits (191), Expect = 2e-15
 Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 49/216 (22%)

Query: 369 VIGTGGFGEVY---KGVLPTRMREFA------------------AEIESLGRLRHKHLVN 407
           V+G G FG+V+   K       + +A                   E + L  + H  +V 
Sbjct: 31  VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90

Query: 408 L----QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAG 457
           L    Q     +  L L+ D++  G L    F      LS E  F           +A  
Sbjct: 91  LHYAFQ----TEGKLYLILDFLRGGDL----F----TRLSKEVMFTEEDVKFYLAELALA 138

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGYI 516
           L +LH      +I+RD+K  N+L+D + + +L DFGL++   DH K +++    GT+ Y+
Sbjct: 139 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 193

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           APE+      + S D +++GVL+ E+ TG  P    
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 76.6 bits (189), Expect = 3e-15
 Identities = 51/214 (23%), Positives = 80/214 (37%), Gaps = 49/214 (22%)

Query: 370 IGTGGFGEVYKGV-LPTRMREFAA----------------EIESLGRLRHKHLVNLQGWC 412
           IG+G FG         T+  E  A                EI +   LRH ++V  +   
Sbjct: 28  IGSGNFGVARLMRDKLTK--ELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85

Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN----------IIKGIAAGLLYLH 462
                L ++ +Y   G L    ++     +    RF+          ++ G++    Y H
Sbjct: 86  LTPTHLAIIMEYASGGEL----YE----RICNAGRFSEDEARFFFQQLLSGVS----YCH 133

Query: 463 EEWEQVVIHRDVKSGNVLIDAD--MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE- 519
                 + HRD+K  N L+D       ++ DFG ++         +T  VGT  YIAPE 
Sbjct: 134 S---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEV 188

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
           L R        DV++ GV L  +  G  P +   
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 74.7 bits (183), Expect = 4e-14
 Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 50/221 (22%)

Query: 364 FKQSEVIGTGGFGEVY-----------------KGVLPTRMREFAAEIESL--------G 398
           F    V+G G FG+V                  K V+         ++E           
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDD-----DVECTMVEKRVLAL 397

Query: 399 RLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIK 452
             +   L  L    +    L  V +Y+  G L         + +    RF          
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL----M----YHIQQVGRFKEPHAVFYAA 449

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVG 511
            IA GL +L     + +I+RD+K  NV++D++ + ++ DFG+ +     G  + T    G
Sbjct: 450 EIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT--FCG 504

Query: 512 TIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           T  YIAPE+        S D +A+GVLL E+  G+ P + +
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 71.5 bits (176), Expect = 1e-13
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 40/211 (18%)

Query: 369 VIGTGGFGEVYKGVLPTRMREFA------AEIESLGRLRH------------KH--LVNL 408
           ++G G FG+V+        + FA        +     +              +H  L ++
Sbjct: 24  MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI------IKGIAAGLLYLH 462
               + K +L  V +Y+  G L         + +    +F++         I  GL +LH
Sbjct: 84  FCTFQTKENLFFVMEYLNGGDL----M----YHIQSCHKFDLSRATFYAAEIILGLQFLH 135

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHTTNVVGTIGYIAPELA 521
               + +++RD+K  N+L+D D + ++ DFG+ +        ++T    GT  YIAPE+ 
Sbjct: 136 S---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCGTPDYIAPEIL 190

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
              K + S D +++GVLL E+  G+ P    
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 71.9 bits (177), Expect = 1e-13
 Identities = 57/211 (27%), Positives = 83/211 (39%), Gaps = 40/211 (18%)

Query: 369 VIGTGGFGEVYKGVLPTRMREFA------------AEIES--------LGRLRHKHLVNL 408
           VIG G FG+V           +A             E +         L  ++H  LV L
Sbjct: 45  VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNI------IKGIAAGLLYLH 462
               +    L  V DYI  G L    F    + L  E+ F           IA+ L YLH
Sbjct: 105 HFSFQTADKLYFVLDYINGGEL----F----YHLQRERCFLEPRARFYAAEIASALGYLH 156

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGYIAPELA 521
                 +++RD+K  N+L+D+  +  L DFGL +   +H   + T    GT  Y+APE+ 
Sbjct: 157 S---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST--FCGTPEYLAPEVL 211

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
                  + D +  G +L E+  G  P  S 
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 71.5 bits (176), Expect = 2e-13
 Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 40/211 (18%)

Query: 369 VIGTGGFGEVYKGVLPTRMREFA------AEIESLGRLRH------------KH--LVNL 408
           V+G G FG+V    +      +A        I     +               H  L  L
Sbjct: 30  VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLLYLH 462
               +    L  V +++  G L         F +   +RF+          I + L++LH
Sbjct: 90  FCCFQTPDRLFFVMEFVNGGDL----M----FHIQKSRRFDEARARFYAAEIISALMFLH 141

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHTTNVVGTIGYIAPELA 521
           +   + +I+RD+K  NVL+D + + +L DFG+ +    +G  + T    GT  YIAPE+ 
Sbjct: 142 D---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT--FCGTPDYIAPEIL 196

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
           +      + D +A GVLL E+  G  P +++
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 71.5 bits (176), Expect = 2e-13
 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 40/211 (18%)

Query: 369 VIGTGGFGEVYKGVLPTRMREFA------AEIESLGRLRH------------KH--LVNL 408
           V+G G FG+V           +A        +     +              K   L  L
Sbjct: 27  VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------IIKGIAAGLLYLH 462
               +    L  V +Y+  G L         + +    RF           IA GL +L 
Sbjct: 87  HSCFQTMDRLYFVMEYVNGGDL----M----YHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL-FDHGKISHTTNVVGTIGYIAPELA 521
               + +I+RD+K  NV++D++ + ++ DFG+ +     G  + T    GT  YIAPE+ 
Sbjct: 139 S---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT--FCGTPDYIAPEII 193

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPIDSD 552
                  S D +A+GVLL E+  G+ P + +
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 70.3 bits (173), Expect = 3e-13
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 40/207 (19%)

Query: 369 VIGTGGFGEVYKGVLPTRMREFA------------AEIESLGRLRH------KH--LVNL 408
           VIG G + +V    L    R +A             +I+ +   +H       H  LV L
Sbjct: 16  VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAGLLYLH 462
               + +  L  V +Y+  G L         F +  +++            I+  L YLH
Sbjct: 76  HSCFQTESRLFFVIEYVNGGDL----M----FHMQRQRKLPEEHARFYSAEISLALNYLH 127

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHTTNVVGTIGYIAPELA 521
           E   + +I+RD+K  NVL+D++ + +L D+G+ +     G  + T    GT  YIAPE+ 
Sbjct: 128 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST--FCGTPNYIAPEIL 182

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
           R      S D +A GVL+ E+  GR P
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSP 209

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 70.1 bits (172), Expect = 6e-13
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 40/207 (19%)

Query: 369 VIGTGGFGEVYKGVLPTRMREFA------------AEIESLGRLRH------KH--LVNL 408
           VIG G + +V    L    R +A             +I+ +   +H       H  LV L
Sbjct: 59  VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG------IAAGLLYLH 462
               + +  L  V +Y+  G L         F +  +++            I+  L YLH
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDL----M----FHMQRQRKLPEEHARFYSAEISLALNYLH 170

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF-DHGKISHTTNVVGTIGYIAPELA 521
           E   + +I+RD+K  NVL+D++ + +L D+G+ +     G  + T    GT  YIAPE+ 
Sbjct: 171 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST--FCGTPNYIAPEIL 225

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRP 548
           R      S D +A GVL+ E+  GR P
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSP 252

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 68.4 bits (167), Expect = 2e-12
 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 5/97 (5%)

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKISHTTNVVGT 512
           +A G+ +L     +  IHRD+ + N+L+      ++ DFGLAR ++         +    
Sbjct: 202 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258

Query: 513 IGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRP 548
           + ++APE       +  +DV+++GVLL EI + G  P
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 44.5 bits (105), Expect = 7e-05
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 24/99 (24%)

Query: 368 EVIGTGGFGEVYKGVL----------------------PTRMREFAAEIESLGRL-RHKH 404
           + +G G FG+V +                          +  R   +E++ L  +  H +
Sbjct: 28  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87

Query: 405 LVNLQGWC-KRKRDLLLVYDYIPNGSLDSLLFDNENFVL 442
           +VNL G C K    L+++ ++   G+L + L    N  +
Sbjct: 88  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 126

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 68.1 bits (167), Expect = 2e-12
 Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 33/216 (15%)

Query: 361 TKGFKQSEVIGTGGFGEVYKGVL----------------PTRMREFAAEIESLGRLRHKH 404
              F+   + G G FG V  G                    R RE    ++ L  L H +
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-QIMQDLAVLHHPN 80

Query: 405 LVNLQ-----GWCKRKRD--LLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIA 455
           +V LQ        + +RD  L +V +Y+P+ +L      +               +  + 
Sbjct: 81  IVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLI 139

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLID-ADMNARLGDFGLARLFDHGKISHTTNVVGTIG 514
             +  LH      V HRD+K  NVL++ AD   +L DFG A+     + +     + +  
Sbjct: 140 RSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN--VAYICSRY 196

Query: 515 YIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPI 549
           Y APEL    +  + + D+++ G +  E+  G  PI
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPI 231

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 67.7 bits (166), Expect = 2e-12
 Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 32/202 (15%)

Query: 368 EVIGTGGFGEVYKGV-------------LPTRMREFAAEIESLGRLR-HKHLVNLQG--W 411
             +G G + EV++ +              P + ++   EI+ L  LR   +++ L     
Sbjct: 42  RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVK 101

Query: 412 CKRKRDLLLVYDYIPNGSLDSLL--FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
               R   LV++++ N     L     + +      + +  +  I   L Y H      +
Sbjct: 102 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDI-----RFY--MYEILKALDYCHSMG---I 151

Query: 470 IHRDVKSGNVLID-ADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA-S 527
           +HRDVK  NV+ID      RL D+GLA  +  G+  +   V  +  +  PEL    +   
Sbjct: 152 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-EYNVRVA-SRYFKGPELLVDYQMYD 209

Query: 528 CSTDVFAYGVLLLEIATGRRPI 549
            S D+++ G +L  +   + P 
Sbjct: 210 YSLDMWSLGCMLASMIFRKEPF 231

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260

 Score = 65.6 bits (159), Expect = 5e-12
 Identities = 34/225 (15%), Positives = 62/225 (27%), Gaps = 37/225 (16%)

Query: 53  SGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFG 112
           +  +R+  +  +  G  +                     ++     F++ T     G  G
Sbjct: 61  ADQIRIAPSLKSQRGSVWTKTKA-------------AFENWEVEVTFRV-TGRGRIGADG 106

Query: 113 LAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGIN 172
           LA   +      G       G  +  N          I FD+    +   ++    V  N
Sbjct: 107 LAIWYTENQGLDGP----VFGSADMWNG-------VGIFFDS-FDNDGKKNNPAIVVVGN 154

Query: 173 VNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFH 232
              +        A     + +        PV+A I Y      V +       KN   F 
Sbjct: 155 NGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFC 214

Query: 233 FGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSF 277
               +   + +P           + G SA+TG     H +L +  
Sbjct: 215 AKVEN---MVIP--------TQGHFGISAATGGLADDHDVLSFLT 248

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 66.0 bits (161), Expect = 1e-11
 Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 37/223 (16%)

Query: 350 HRFRYSD-LYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA---------------- 392
           +     D  +T  K ++  + IG+G  G V        +    A                
Sbjct: 49  YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCA-AYDAVLDRNVAIKKLSRPFQNQTHAKR 107

Query: 393 ---EIESLGRLRHKHLVNL------QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLS 443
              E+  +  + HK++++L      Q   +  +D+ LV +      +D+ L       L 
Sbjct: 108 AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQMELD 162

Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI 503
            E+   ++  +  G+ +LH      +IHRD+K  N+++ +D   ++ DFGLAR       
Sbjct: 163 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 217

Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGR 546
              T  V T  Y APE+        + D+++ G ++ E+   +
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 64.3 bits (157), Expect = 3e-11
 Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 37/223 (16%)

Query: 350 HRFRYSD-LYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA---------------- 392
           +     D  +T  K ++  + IG+G  G V        +    A                
Sbjct: 12  YSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCA-AYDAILERNVAIKKLSRPFQNQTHAKR 70

Query: 393 ---EIESLGRLRHKHLVNL------QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLS 443
              E+  +  + HK+++ L      Q   +  +D+ +V + +   +L  ++       L 
Sbjct: 71  AYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LD 125

Query: 444 WEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI 503
            E+   ++  +  G+ +LH      +IHRD+K  N+++ +D   ++ DFGLAR       
Sbjct: 126 HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 180

Query: 504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGR 546
              T  V T  Y APE+        + D+++ G ++ E+  G 
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 61.6 bits (150), Expect = 3e-10
 Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 18/161 (11%)

Query: 393 EIESLGRLRHKHLVNL------QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           E+  L  +RH++++ L              D  LV  ++    L  L+   +   L  ++
Sbjct: 74  ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEK---LGEDR 129

Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
              ++  +  GL Y+H      +IHRD+K GN+ ++ D   ++ DFGLAR  D    S  
Sbjct: 130 IQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQAD----SEM 182

Query: 507 TNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           T  V T  Y APE +    + + + D+++ G ++ E+ TG+
Sbjct: 183 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 61.2 bits (149), Expect = 3e-10
 Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 19/161 (11%)

Query: 393 EIESLGRLRHKHLVNL------QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           E+  L  ++H++++ L          +   D  LV  ++    L  ++        S E+
Sbjct: 73  ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLK----FSEEK 127

Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
              ++  +  GL Y+H      V+HRD+K GN+ ++ D   ++ DFGLAR  D    +  
Sbjct: 128 IQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD----AEM 180

Query: 507 TNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           T  V T  Y APE +      + + D+++ G ++ E+ TG+
Sbjct: 181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 60.8 bits (148), Expect = 5e-10
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD--HGKISHTTNVVGTIG 514
           GL Y+H      V+HRD+K  N+L++   + ++ DFGLAR+ D  H      T  V T  
Sbjct: 140 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196

Query: 515 YIAPELARTGKA-SCSTDVFAYGVLLLEIATGR 546
           Y APE+    K  + S D+++ G +L E+ + R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 60.4 bits (147), Expect = 6e-10
 Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 18/161 (11%)

Query: 393 EIESLGRLRHKHLVNL------QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           E+  L  ++H++++ L          +   D+ LV   +    L++++   +   L+ + 
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQK---LTDDH 133

Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT 506
              +I  I  GL Y+H      +IHRD+K  N+ ++ D   ++ DFGLAR          
Sbjct: 134 VQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTA----DEM 186

Query: 507 TNVVGTIGYIAPE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           T  V T  Y APE +      + + D+++ G ++ E+ TGR
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 60.1 bits (146), Expect = 9e-10
 Identities = 40/242 (16%), Positives = 79/242 (32%), Gaps = 60/242 (24%)

Query: 359 TATKGFKQSEVIGTGGFGEVYKGVLPTRMREFAA-------------EIESLGRLRHKHL 405
           T++K +   + +GTG FG V +        +  A             E++ +  L H ++
Sbjct: 4   TSSKKYSLGKTLGTGSFGIVCEVFD-IESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62

Query: 406 VNLQ---GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN------------- 449
           + L         +           N         N +                       
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122

Query: 450 ----IIKG-------------------IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN 486
               ++K                    +   + ++H      + HRD+K  N+L+++  N
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVNSKDN 179

Query: 487 A-RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIAT 544
             +L DFG A+     + S     + +  Y APEL       + S D+++ G +  E+  
Sbjct: 180 TLKLCDFGSAKKLIPSEPS--VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237

Query: 545 GR 546
           G+
Sbjct: 238 GK 239

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 59.6 bits (145), Expect = 1e-09
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYI 516
           GL  LHE     V+HRD+  GN+L+  + +  + DF LAR       ++ T+ V    Y 
Sbjct: 146 GLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYR 200

Query: 517 APE-LARTGKASCSTDVFAYGVLLLEIATGR 546
           APE + +    +   D+++ G ++ E+   +
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 59.1 bits (142), Expect = 2e-09
 Identities = 35/211 (16%), Positives = 55/211 (26%), Gaps = 63/211 (29%)

Query: 349 PHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL----------------------PTR 386
           P  F +      T+  ++ E IG G FGEV++ +                          
Sbjct: 10  PVPFSH---CLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKT 66

Query: 387 MREFAAEIESLGRL---------RHKHLVNLQGWC----KRKRDLLLVYDY--IPNGSLD 431
             E   EI     L         R +  + L             LL  +D+     GS +
Sbjct: 67  FEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSAN 126

Query: 432 ---------------------SLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
                                  L      + S     +I+  + A L            
Sbjct: 127 DRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLR--FE 184

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHG 501
           HRD+  GNVL+      +L      +     
Sbjct: 185 HRDLHWGNVLLKKTSLKKLHYTLNGKSSTIP 215

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.9 bits (144), Expect = 2e-09
 Identities = 49/322 (15%), Positives = 99/322 (30%), Gaps = 85/322 (26%)

Query: 354 YSDLYTATKGFKQSEVI---GTGGFGEVYKGVLPTRMREFAAEIESLGRLRHK-----HL 405
           Y  L  A    + ++ +   G  G G   K  +       A ++    +++ K       
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSG---KTWV-------ALDVCLSYKVQCKMDFKIFW 186

Query: 406 VNLQGWCKRKRDLL-----LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +NL   C     +L     L+Y   PN +         +   + + R + I+     LL 
Sbjct: 187 LNL-KNCNSPETVLEMLQKLLYQIDPNWT------SRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG-KISHTTNVVGTIGYIAPE 519
                  +++  +V++     +A              F+   KI  TT       +++  
Sbjct: 240 SKPYENCLLVLLNVQNAKA-WNA--------------FNLSCKILLTTRFKQVTDFLSAA 284

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWV-LEFQHLGQVLDVVDPNLG 578
                            + L   +    P +    +L+ ++    Q L + +   +P   
Sbjct: 285 TTTH-------------ISLDHHSMTLTPDEVKS-LLLKYLDCRPQDLPREVLTTNP--- 327

Query: 579 SSYVVAEMELVLQL-GLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSLDSQRS-EM 636
                      L +                    +++N D+L  II+  SSL+     E 
Sbjct: 328 ---------RRLSIIAESIRD-----GLATWDNWKHVNCDKLTTIIE--SSLNVLEPAEY 371

Query: 637 NSRY--LEIISTD-NITTSQLS 655
              +  L +     +I T  LS
Sbjct: 372 RKMFDRLSVFPPSAHIPTILLS 393

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.7 bits (141), Expect = 5e-09
 Identities = 108/655 (16%), Positives = 196/655 (29%), Gaps = 173/655 (26%)

Query: 5   VSFALRLFFFPVIAALSQQKEEFIFNGFNET--KTNQG-LITRERASILKPSGALRLTDN 61
           VS  LRLF       LS+Q+E  +   F E   + N   L++  +    +PS   R+   
Sbjct: 61  VSGTLRLF----WTLLSKQEE--MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114

Query: 62  AHNVI---GHAF--YN----KPIQMLDKS-TSLSSKPNASSFSTCFVFQIVTPNSGQGGF 111
             + +      F  YN    +P   L ++   L    N        +        G  G 
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV------LID-------GVLGS 161

Query: 112 G---LAFTV----SPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDS 164
           G   +A  V      Q          +L + N  +       L  + +     +   SD 
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKI--FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 165 QGNHVGINVNSMKS-----IKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVT 219
             N + + ++S+++     +K +P   YEN                 +    V       
Sbjct: 220 SSN-IKLRIHSIQAELRRLLKSKP---YEN---------------CLLVLLNVQ------ 254

Query: 220 ICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILG---WS 276
               N K   +F+     + LL+           T +   +       ++H  L     +
Sbjct: 255 ----NAKAWNAFNLS--CKILLT-----------TRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 277 F----SMNGAAPSLNLSQIPSLPIERSSSNSFSLQIKILIAALSTVAVILLG---TLLIF 329
                  +     L+      LP E  ++N   L    +IA      +        +   
Sbjct: 298 LTPDEVKSLLLKYLDCR-PQDLPREVLTTNPRRLS---IIAESIRDGLATWDNWKHVNCD 353

Query: 330 KLYRRIAQF-EILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMR 388
           KL   I     +LE  E     R  +  L      F  S  I T     ++  V+ + + 
Sbjct: 354 KLTTIIESSLNVLEPAEY----RKMFDRLSV----FPPSAHIPTILLSLIWFDVIKSDVM 405

Query: 389 EFAAEIESLGRLRHKHLVNLQGWCKRKR----DLLLVYDYIPNG--SLDSLLFDNENFVL 442
               +      L    LV      K        + L          +L   + D+ N   
Sbjct: 406 VVVNK------LHKYSLVE--KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 443 SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL---FD 499
           +++   ++I        Y H     +  H        L + +   R+  F +  L   F 
Sbjct: 458 TFDS-DDLIPPYLDQYFYSH-----IGHH--------LKNIEHPERMTLFRMVFLDFRFL 503

Query: 500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW 559
             KI H +      G I   L           +  Y                 +    D 
Sbjct: 504 EQKIRHDSTAWNASGSILNTL---------QQLKFY---------------KPYICDNDP 539

Query: 560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQK--AEARPTMRQVLR 612
             E + +  +LD + P +  + + ++   +L++ L+   +    EA    +QV R
Sbjct: 540 KYE-RLVNAILDFL-PKIEENLICSKYTDLLRIALMAEDEAIFEEA---HKQVQR 589

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 58.1 bits (141), Expect = 3e-09
 Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 43/218 (19%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA-----------------EIESLGRLRHKHLV 406
           +   + +G GG G V+  V      +  A                 EI+ + RL H ++V
Sbjct: 13  YMDLKPLGCGGNGLVFSAV-DNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71

Query: 407 NL--------------QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIK 452
            +               G       + +V +Y+    L ++L       L  E     + 
Sbjct: 72  KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGP---LLEEHARLFMY 127

Query: 453 GIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFD--HGKISHTTNV 509
            +  GL Y+H      V+HRD+K  N+ I+  D+  ++GDFGLAR+ D  +    H +  
Sbjct: 128 QLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184

Query: 510 VGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGR 546
           + T  Y +P L  +    + + D++A G +  E+ TG+
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52

 Score = 52.1 bits (125), Expect = 4e-09
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 241 LSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGAAPS 285
           LS  + L     E + +GFSA+TG + ++H +L WSF    +  S
Sbjct: 6   LSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSELSGTS 50

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 57.6 bits (140), Expect = 4e-09
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 13/100 (13%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD---------HGKISHTT 507
            +  LH      VIHRD+K  N+LI+++ + ++ DFGLAR+ D          G+ S   
Sbjct: 124 AVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180

Query: 508 NVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGR 546
             V T  Y APE+  T    S + DV++ G +L E+   R
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253

 Score = 56.8 bits (136), Expect = 5e-09
 Identities = 33/230 (14%), Positives = 68/230 (29%), Gaps = 44/230 (19%)

Query: 53  SGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTP-NSGQGGF 111
           S  +RLT +  +  G  + ++P                  +     F++         G 
Sbjct: 37  SQYVRLTPDERSKEGSIWNHQPC-------------FLKDWEMHVHFKVHGTGKKNLHGD 83

Query: 112 GLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGI 171
           G+A   +     PG         +  + D+       AI  DT    +ET++    ++ +
Sbjct: 84  GIALWYTRDRLVPGP--------VFGSKDNFHG---LAIFLDTYPN-DETTERVFPYISV 131

Query: 172 NVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQ---AWIDYDGVNRLVNVTICPMNKKNK 228
            VN              NG+      + G   +      D+   +    + +     +  
Sbjct: 132 MVN--------------NGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRGRLT 177

Query: 229 LSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFS 278
           +       ++    + +          Y G SA TG    +H I+     
Sbjct: 178 VMTDLEDKNEWKNCIDIT-GVRLPTGYYFGASAGTGDLSDNHDIISMKLF 226

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 57.1 bits (138), Expect = 8e-09
 Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 29/159 (18%)

Query: 364 FKQSEVIGTGGFGEVYKGV--------------LPTRMREFAA----EIESLGRLRHKHL 405
           ++   +IGTG +G V +                              EI  L RL H H+
Sbjct: 55  YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114

Query: 406 VNLQ-----GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           V +         ++  +L +V +   +     L        L+      ++  +  G+ Y
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVY--LTELHIKTLLYNLLVGVKY 171

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD 499
           +H      ++HRD+K  N L++ D + ++ DFGLAR  D
Sbjct: 172 VH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 55.8 bits (135), Expect = 1e-08
 Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 34/153 (22%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA-----------EIESLGRL-RHKHLVNLQGWC--- 412
           +V+G G  G+V +        +FA            E+E   R  +  H+V +       
Sbjct: 24  QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENL 83

Query: 413 -KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRF------NIIKGIAAGLLYLHEEW 465
              ++ LL+V + +  G     LF         +Q F       I+K I   + YLH   
Sbjct: 84  YAGRKCLLIVMECLDGGE----LFS--RIQDRGDQAFTEREASEIMKSIGEAIQYLH--- 134

Query: 466 EQVVIHRDVKSGNVL-IDADMNA--RLGDFGLA 495
              + HRDVK  N+L      NA  +L DFG A
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 24/85 (28%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT---------- 506
           G  ++HE     +IHRD+K  N L++ D + ++ DFGLAR  +  K ++           
Sbjct: 141 GENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197

Query: 507 -----------TNVVGTIGYIAPEL 520
                      T+ V T  Y APEL
Sbjct: 198 GPHNKNLKKQLTSHVVTRWYRAPEL 222

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 53.0 bits (127), Expect = 2e-07
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 57/196 (29%)

Query: 429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---- 484
            L   +  +    L       II+ +  GL YLH +    +IH D+K  N+L+  +    
Sbjct: 130 HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYI 187

Query: 485 ---------------------------------------------MNARLGDFGLARLFD 499
                                                        +  ++ D G A    
Sbjct: 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH 247

Query: 500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW 559
                H T  + T  Y + E+      +   D+++   +  E+ATG    +       ++
Sbjct: 248 K----HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP--HSGEEY 301

Query: 560 VLEFQHLGQVLDVVDP 575
             +  H+  +++++  
Sbjct: 302 TRDEDHIALIIELLGK 317

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 52.4 bits (126), Expect = 3e-07
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 23/84 (27%)

Query: 457 GLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT---------- 506
            + YLH      ++HRD+K  N+L++A+ + ++ DFGL+R F + +              
Sbjct: 121 VIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177

Query: 507 ----------TNVVGTIGYIAPEL 520
                     T+ V T  Y APE+
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEI 201

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 51.2 bits (123), Expect = 5e-07
 Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 14/153 (9%)

Query: 429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID------ 482
           +L +L+   E+  +       I K +  GL Y+H      +IH D+K  NVL++      
Sbjct: 115 NLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPE 172

Query: 483 ADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEI 542
             +  ++ D G A  +D     H TN + T  Y +PE+       C  D+++   L+ E+
Sbjct: 173 NLIQIKIADLGNACWYDE----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL 228

Query: 543 ATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP 575
            TG    + D      +  +  H+ Q+++++  
Sbjct: 229 ITGDFLFEPDE--GHSYTKDDDHIAQIIELLGE 259

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 50.8 bits (122), Expect = 5e-07
 Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 27/155 (17%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVN-------LQG------ 410
           ++    IG+G FG++Y G       E A ++E + + +H  L         +QG      
Sbjct: 11  YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV-KTKHPQLHIESKIYKMMQGGVGIPT 69

Query: 411 --WCKRKRDL-LLVYDYIPNG-SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
             WC  + D  ++V + +  G SL+  LF+  +   S +    +   + + + Y+H    
Sbjct: 70  IRWCGAEGDYNVMVMELL--GPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYIH---S 123

Query: 467 QVVIHRDVKSGNVLIDADMNA---RLGDFGLARLF 498
           +  IHRDVK  N L+          + DFGLA+ +
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 51.2 bits (122), Expect = 7e-07
 Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 33/178 (18%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVN-------LQG------ 410
           F+    IG+G FGE+Y G       E A ++E++ + +H  L+        LQG      
Sbjct: 9   FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV-KTKHPQLLYESKIYRILQGGTGIPN 67

Query: 411 --WCKRKRDL-LLVYDYIPNG-SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
             W   + D  +LV D +  G SL+  LF+  +  LS +    +   +   + ++H    
Sbjct: 68  VRWFGVEGDYNVLVMDLL--GPSLED-LFNFCSRKLSLKTVLMLADQMINRVEFVH---S 121

Query: 467 QVVIHRDVKSGNVLIDADMNAR---LGDFGLARLF-DHGKISH-----TTNVVGTIGY 515
           +  +HRD+K  N L+     A    + DFGLA+ + D     H       N+ GT  Y
Sbjct: 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 179

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 47.7 bits (114), Expect = 6e-06
 Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 43/184 (23%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLG----RLRH-----KHLVNLQGWCKR 414
           +K    IG G FG +++G      ++ A + E       +LR      K L    G    
Sbjct: 12  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPN- 70

Query: 415 KRDLLLVYDYIPNG------------SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
                 VY +   G            SL+ L  D      S +      K + A +  +H
Sbjct: 71  ------VYYFGQEGLHNVLVIDLLGPSLEDL-LDLCGRKFSVKTVAMAAKQMLARVQSIH 123

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNAR-----LGDFGLARLF-DHGKISH-----TTNVVG 511
           E   + +++RD+K  N LI    +       + DFG+ + + D     H       N+ G
Sbjct: 124 E---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 180

Query: 512 TIGY 515
           T  Y
Sbjct: 181 TARY 184

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 34/192 (17%), Positives = 63/192 (32%), Gaps = 42/192 (21%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLRHKHLVN-------LQG---WCK 413
           +   + IG+GGFG +Y      +  + A  +  +    +  L +       +       K
Sbjct: 39  WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKK 98

Query: 414 RKRDLLLVYDYIPN----GSLDS-----------LLFDNENFVLSWEQRFNI--IKGIAA 456
                 L Y  IP     G  +             L  +   +      F    +  +  
Sbjct: 99  WIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGI 158

Query: 457 GLL----YLHEEWEQVVIHRDVKSGNVLIDADMNAR--LGDFGLARLF-DHGKISH---- 505
            +L    Y+HE      +H D+K+ N+L+      +  L D+GL+  +  +G        
Sbjct: 159 RMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQEN 215

Query: 506 -TTNVVGTIGYI 516
                 GTI + 
Sbjct: 216 PRKGHNGTIEFT 227

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 45.1 bits (107), Expect = 5e-05
 Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 53/193 (27%)

Query: 370 IGTGGFGEVYKGV--------LPTRMREFAAEIESL-GRLRHKHLV--------NLQGWC 412
                 G +Y+             + ++F+ ++++  GRL ++            +  W 
Sbjct: 50  QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109

Query: 413 KRKRDLLL----VYDYIPNG-------------SLDSLLFDNENFVLSWEQRFNIIKGIA 455
           K     LL       +  +              SL S L  +   VLS      +   + 
Sbjct: 110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLL 169

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR--LGDFGLARLF----------DHGKI 503
             L +LHE      +H +V + N+ +D +  ++  L  +G A  +          +  + 
Sbjct: 170 DALEFLHE---NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRS 226

Query: 504 SHTTNVVGTIGYI 516
            H     G + +I
Sbjct: 227 PHE----GDLEFI 235

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 44.8 bits (106), Expect = 6e-05
 Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 45/189 (23%)

Query: 370 IGTGGFGEVYKGVLPTRM-----REFAAEIESL--GRLRH-----KHLVNLQGWCKRKRD 417
           IG GGFG +Y   + +            ++E    G L       +     +   K  R 
Sbjct: 43  IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102

Query: 418 LLLVYDYIPN----GSLDSLLFDNENFVL-----SWEQRFNIIKG---------IAAGLL 459
             L Y  +P     G  D         ++       ++ +              ++  +L
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRIL 162

Query: 460 ----YLHEEWEQVVIHRDVKSGNVLIDADMNAR--LGDFGLARLF-DHGKISH-----TT 507
               Y+HE      +H D+K+ N+L++     +  L D+GLA  +   G           
Sbjct: 163 DILEYIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKR 219

Query: 508 NVVGTIGYI 516
              GTI + 
Sbjct: 220 CHDGTIEFT 228

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 43.9 bits (104), Expect = 1e-04
 Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 37/161 (22%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAAEIESLGRLR---------HKHLVNLQGWCKR 414
           F+  + IG G FGE+  G         A ++E +             +K L +  G  + 
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ- 69

Query: 415 KRDLLLVYDYIPNG------------SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
                 VY + P G            SL+ L FD  +   S +    I   + + + Y+H
Sbjct: 70  ------VYYFGPCGKYNAMVLELLGPSLEDL-FDLCDRTFSLKTVLMIAIQLISRMEYVH 122

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNAR-----LGDFGLARLF 498
            +    +I+RDVK  N LI    N       + DF LA+ +
Sbjct: 123 SK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	670
3ujo_A	281	Legume lectin; carbohydrate-binding, galactose, ad	100.0
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	100.0
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	100.0
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	100.0
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	100.0
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	100.0
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	100.0
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	100.0
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	100.0
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	100.0
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	100.0
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	100.0
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	100.0
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	100.0
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	100.0
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	100.0
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	100.0
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	100.0
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	100.0
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	100.0
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	100.0
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	100.0
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.98
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.98
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	99.95
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	99.91
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.91
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.91
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.8
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	99.69
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.64
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	99.44
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.44
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	99.3
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.95
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.77
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.7
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.65
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.14
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.87
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.77
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.69
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.69
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.62
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.17
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.77
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.72
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	95.97
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	95.93
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	95.91
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	95.7
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	95.7
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.13
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	94.62
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	93.39
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	91.33
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	91.11
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	86.64
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	85.52
3mes_A	424	Choline kinase; malaria, structural genomics, stru	84.64
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	84.35
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	83.61
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	83.6
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	82.73
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	81.26

>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A*

Probab=100.00  E-value=2e-64  Score=511.40  Aligned_cols=239  Identities=35%  Similarity=0.573  Sum_probs=204.4

Q ss_pred             HHHHHHHHHhhhhccCCceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCCC------eEEEEEecCceeeecC
Q 035655            7 FALRLFFFPVIAALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLDK   80 (670)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~~------~~Gr~~y~~pv~l~~~   80 (670)
                      +.+.+|++++..+.++..++|+|++|+.  .+   |.++|+|.+. +|.|+||++..+      ++|||+|++||+|||+
T Consensus         9 ~~~~~fl~l~~~~~sa~~~sF~f~~F~~--~n---L~l~GdA~i~-~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d~   82 (281)
T 3ujo_A            9 KRIVLFLILLTKAASANLISFTFKKFNE--TN---LILQRDATVS-SGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDN   82 (281)
T ss_dssp             ---------------CEEEEEEESSCCS--TT---EEECSSCCCB-TTBEECSCCCSSCCCCSSCEEEEEESSCEECBCS
T ss_pred             HHHHHHHHHHcccCcCCcceEEcCCCCc--cC---EEEecceEEe-CCEEEeCCCCCCCcccCCceEEEEECCCEEcccC
Confidence            3344455555666677889999999975  67   9999999998 999999998755      8999999999999999


Q ss_pred             CCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCC
Q 035655           81 STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNE  160 (670)
Q Consensus        81 ~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~  160 (670)
                      .+|     +++||+|+|+|+|.+++...+||||||||+|.+..| ++.||||||+|.+++ ++.||+|||||||++| .+
T Consensus        83 ~tg-----~vaSFsTsFsF~I~~~~~~~~gdGlAF~laP~~~~p-~~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~N-~e  154 (281)
T 3ujo_A           83 TTG-----TVASWATSFTFNLQAPNAASPADGLAFALVPVGSQP-KDKGGFLGLFDSKNY-ASSNQTVAVEFDTFYN-GG  154 (281)
T ss_dssp             SSC-----CBEEEEEEEEEECCCSSTTSCCEEEEEEEEETTCCC-CCCGGGTTTCSCSSC-CTTSCCEEEEECCSCC-CS
T ss_pred             CCC-----CceeEEEEEEEEEecCCCCCCCCceEEEEecCCCCC-CCCcceeeeccccCC-CccCcEEEEEEecccc-cc
Confidence            999     899999999999998877789999999999988665 478999999998876 7889999999999999 67


Q ss_pred             CCCCCCCeeEEecCCcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcc
Q 035655          161 TSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPL  240 (670)
Q Consensus       161 ~~Dp~~~Hvgidvns~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~  240 (670)
                      + ||++|||||||||++|+++++           +++.+|+.++|||+||+.+++|+|++++.+.          |.+|+
T Consensus       155 ~-Dp~~nHVGIDvNSi~S~~t~~-----------~~l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~----------~~~~~  212 (281)
T 3ujo_A          155 W-DPTERHIGIDVNSIKSIKTTS-----------WDFANGENAEVLITYDSSTNLLVASLVHPSQ----------KTSFI  212 (281)
T ss_dssp             S-CCSSSEEEEEESSSCCSCEEE-----------CCCCSSCCEEEEEEECTTTCEEEEEEECTTT----------CCCEE
T ss_pred             C-CCCCCeEEEEcCCCCcccccc-----------ccccCCCEEEEEEEEeCCCCEEEEEEecCCC----------CCCce
Confidence            4 999999999999999988876           4567999999999999999999999997653          44789


Q ss_pred             cccccCCcccccccceeeEeecCCc---eeeeEEEeccccccCC
Q 035655          241 LSLPLDLSPAFQETMYVGFSASTGR---KVSSHFILGWSFSMNG  281 (670)
Q Consensus       241 ls~~~dl~~~l~~~~~vGFsastg~---~~~~h~i~sW~fs~~~  281 (670)
                      |++.|||+++|||+||||||||||.   ..|.|+|++|+|+++.
T Consensus       213 lS~~vDL~~~L~e~v~VGFSAsTG~~~~~~e~H~IlsWSFss~l  256 (281)
T 3ujo_A          213 VSERVDLTSVLPEWVSVGFSATTGLSKGYVETNEVLSWSFASKL  256 (281)
T ss_dssp             EEEECCSTTTSCSEEEEEEEEEECSSTTSCCCCEEEEEEEEEEE
T ss_pred             EEEEechHHhccCcEEEEEEeecCCCCcccceeEEEEEEEEEEc
Confidence            9999999999999999999999996   5899999999999864

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ...

Probab=100.00  E-value=7.4e-63  Score=496.21  Aligned_cols=231  Identities=27%  Similarity=0.465  Sum_probs=206.2

Q ss_pred             hhccCCceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCC------CeEEEEEecCceeeecCCCCCCCCCCcc
Q 035655           18 AALSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH------NVIGHAFYNKPIQMLDKSTSLSSKPNAS   91 (670)
Q Consensus        18 ~~~~~~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~~~~~~   91 (670)
                      .+.++..++|+|++|.+...+   |.++|+|.+.++|.|+||+...      +++|||+|++||+|||+.+|     +++
T Consensus         5 ~~~sa~~~sF~f~~F~~~~~~---l~l~GdA~i~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pv~l~d~~tg-----~va   76 (261)
T 3zyr_A            5 RANSTDSLSFSFINFDRDERN---LIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLWEKSTN-----RVA   76 (261)
T ss_dssp             ---CCEEEEEEESSCCSCCTT---EEEEETCEECTTSCEECSCBCTTSCBCSSEEEEEEESSCEECBCTTTC-----CBE
T ss_pred             ccCcCcccEEEcCCCCCCCCC---eEEeccEEecCCCeEEeCCCCCCCccccCCEEEEEECCCEEeecCCCC-----Cce
Confidence            455667899999999854456   9999999997799999998765      79999999999999999999     899


Q ss_pred             ceeEEEEEEEecCCCCCCCCcEEEEEcCCCC-CCCCCCCcccccccCCCCCC-CCCcEEEEEeeec---CCCCCCCCCCC
Q 035655           92 SFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNSTNDHK-PSNHLFAIEFDTV---NGYNETSDSQG  166 (670)
Q Consensus        92 sFst~F~f~i~~~~~~~~g~GlaF~l~~~~~-~~~~~~g~~lGl~~~~~~~~-~~~~~vaVEFDt~---~n~~~~~Dp~~  166 (670)
                      ||+|+|+|.|.++ ...+||||||||+|.+. +|.+++||||||+|.+++++ ..||+|||||||+   +| .++ ||++
T Consensus        77 SFsT~F~F~I~~~-~~~~gdGlAF~lap~~~~~p~~~~g~~LGL~n~~~~g~~~~n~~vAVEFDT~~~~~n-~~~-Dp~~  153 (261)
T 3zyr_A           77 NLQTQFSFFLSSP-LSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNS-NTW-DPNY  153 (261)
T ss_dssp             EEEEEEEEEEECS-SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCCTTTTTCGGGCCCEEEEEECCCCTTT-CTT-SCSS
T ss_pred             eEEEEEEEEEecC-CCCCCccEEEEEccCCCCCCCCCCCceeeeecccccCCCccCcEEEEEEeccccccC-cCC-CCCC
Confidence            9999999999987 66789999999999876 48889999999999987754 5689999999999   88 674 9999


Q ss_pred             CeeEEecCCcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccC
Q 035655          167 NHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLD  246 (670)
Q Consensus       167 ~Hvgidvns~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~d  246 (670)
                      |||||||||++|+++++           +.+.+|+.++|||+||+.+++|+|+|++.+.           .+|+|++.||
T Consensus       154 nHVGIdvNsi~S~~s~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~-----------~~~~ls~~vd  211 (261)
T 3zyr_A          154 QHIGIDVNSIRSSKVVR-----------WERREGKTLNVLVTYNPSTRTIDVVATYPDG-----------QRYQLSHVVD  211 (261)
T ss_dssp             CEEEEEESSSSCSEEEE-----------CCCCTTCCEEEEEEEETTTTEEEEEEECTTC-----------CEEEEEEECC
T ss_pred             CeEEEEcCCCCcccccc-----------ccccCCceEEEEEEEcCCCCEEEEEEEcCCC-----------CCeEEEEEec
Confidence            99999999999998876           4667999999999999999999999987543           3789999999


Q ss_pred             CcccccccceeeEeecCCceeeeEEEeccccccCC
Q 035655          247 LSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNG  281 (670)
Q Consensus       247 l~~~l~~~~~vGFsastg~~~~~h~i~sW~fs~~~  281 (670)
                      |+++|||+||||||||||...|.|+|++|+|+++.
T Consensus       212 L~~~l~e~v~VGFSAsTG~~~e~h~IlsWsF~s~l  246 (261)
T 3zyr_A          212 LTTILPEWVRVGFSAASGEQFQTHNLESWSFTSTL  246 (261)
T ss_dssp             GGGTSCSEEEEEEEEEESSSCCEEEEEEEEEEEEE
T ss_pred             hHHhCcCcEEEEEEecCCCccceEEEEEEEEEEEc
Confidence            99999999999999999999999999999999864

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A*

Probab=100.00  E-value=4.3e-63  Score=496.49  Aligned_cols=227  Identities=30%  Similarity=0.527  Sum_probs=205.7

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCCC------eEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~~------~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      +.++|+|++|.+...+   |.++|+|.+.++|.|+||+...+      ++|||+|++||+|||+.+|     +++||+|+
T Consensus         2 ~~~sF~f~~F~~~~~n---l~l~GdA~v~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pi~l~d~~tg-----~vaSFsT~   73 (251)
T 3ipv_A            2 EETSFVFSKFKPLEPN---LILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATG-----LVASFATS   73 (251)
T ss_dssp             EEEEEEESSCCSSCTT---EEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTC-----CBCEEEEE
T ss_pred             cceEEEeCCCCCCCCC---eEEeccEEecCCCeEEcCCCCCCCcccCCcEEEEEECCCEEeecCCCC-----ceeeEEEE
Confidence            4689999999854456   99999999977999999998755      8999999999999999999     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      |+|.|.+++...+||||||||+|.+..|+ ..||||||+|.+++ +..||+|||||||++| .+++||++|||||||||+
T Consensus        74 F~F~I~~~~~~~~gdGlAF~lap~~~~~~-~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~n-~~~~Dp~~nHVGIdvNsi  150 (251)
T 3ipv_A           74 FRFTIYAPNIATIADGLAFFLAPVASAPD-SGGGFLGLFDSAVS-GSTYQTVAVEFDTYEN-TVFTDPPYTHIGFDVNSI  150 (251)
T ss_dssp             EEEECCCSSTTSCCEEEEEEEEETTCCCC-CCGGGTTTCSSSSC-CTTSCCEEEEEECSCC-GGGTCCSSCEEEEEESSS
T ss_pred             EEEEEeCCCCCCCCCceEEEEecCCCCCC-CCCceeeeccccCC-CccCcEEEEEEecccc-cccCCCCCCeEEEEcCCC
Confidence            99999988777899999999999887655 67999999998776 7789999999999999 777799999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      +|+++++           +.+.+|+.++|||+||+.+++|+|+|++.+.          |..|+|++.|||+++|||+||
T Consensus       151 ~S~~t~~-----------~~l~~G~~~~v~I~Yd~~tk~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~v~  209 (251)
T 3ipv_A          151 SSIKTVK-----------WSLANGEAAKVLITYNSAVKLLVASLVYPSS----------KTSFILADIVDLSSVLPEWVR  209 (251)
T ss_dssp             SCSEEEE-----------CCCCTTCEEEEEEEEETTTTEEEEEEECTTT----------CCEEEEEEECCHHHHSCSEEE
T ss_pred             cccccce-----------eEecCCCEEEEEEEEeCCCCEEEEEEecCCC----------CccceEEEEechHHhCCCcEE
Confidence            9988875           5678999999999999999999999986543          467899999999999999999


Q ss_pred             eeEeecCCce---eeeEEEeccccccCC
Q 035655          257 VGFSASTGRK---VSSHFILGWSFSMNG  281 (670)
Q Consensus       257 vGFsastg~~---~~~h~i~sW~fs~~~  281 (670)
                      ||||||||..   .|.|+|++|+|+++.
T Consensus       210 VGFSAsTG~~~~~~e~h~IlsWsF~s~l  237 (251)
T 3ipv_A          210 VGFSAATGASGGKIETHDVFSWSFASKL  237 (251)
T ss_dssp             EEEEEEECSSTTCCCCCEEEEEEEEEEE
T ss_pred             EEEEEecCCCccccceeEEEEEEEEEEC
Confidence            9999999998   999999999999864

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1

Probab=100.00  E-value=2.1e-61  Score=483.68  Aligned_cols=227  Identities=31%  Similarity=0.516  Sum_probs=204.5

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC-----CCeEEEEEecCceeeecCCCCCCCCCCccceeEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA-----HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCF   97 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F   97 (670)
                      ..++|+|++|.+...+   |.++|+|.+.++|.|+||++.     .++.|||+|++||+|||+.+|     +++||+|+|
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg-----~vaSFsT~F   73 (239)
T 1dbn_A            2 DELSFTINNFVPNEAD---LLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTG-----SVASFSTSF   73 (239)
T ss_dssp             CEEEEEESSCCTTCTT---EEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTC-----CBCEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---eEEcccEEecCCCcEEeCCCCCCCcccCceEEEEeCCCEecccCCCC-----CccceEEEE
Confidence            4689999999853356   999999999878999999876     689999999999999999998     899999999


Q ss_pred             EEEEecCCCCCCCCcEEEEEcCCCC-CCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCC--CCCCCCCCCeeEEecC
Q 035655           98 VFQIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGY--NETSDSQGNHVGINVN  174 (670)
Q Consensus        98 ~f~i~~~~~~~~g~GlaF~l~~~~~-~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~--~~~~Dp~~~Hvgidvn  174 (670)
                      +|.|.+++...+||||||||+|.+. +|.++.||||||+|.++ +++.||+|||||||++|.  .+ |||++||||||||
T Consensus        74 ~F~I~~~~~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~n~~~~~-~Dp~~nHVGIdvN  151 (239)
T 1dbn_A           74 TFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN-SDSSNQIVAVEFDTYFAHSYDP-WDPNYRHIGIDVN  151 (239)
T ss_dssp             EEECCCSSTTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSC-CCTTSCCEEEEEECCCCTTTCT-TSCSSCEEEEEES
T ss_pred             EEEEeCCCCCCCCCCEEEEEecCCCCCCcCCCCCcccccccCC-CCccccEEEEEEeccccCcccc-cCCCCCcEEEecC
Confidence            9999988777899999999999876 68889999999999764 477899999999999982  24 7999999999999


Q ss_pred             CcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccccccc
Q 035655          175 SMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQET  254 (670)
Q Consensus       175 s~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~  254 (670)
                      |++|+++++           ++|.+|+.++|||+||+.+++|+|+|++.+.          |..|+|++.+||+++|||+
T Consensus       152 s~~S~~~~~-----------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~  210 (239)
T 1dbn_A          152 GIESIKTVQ-----------WDWINGGVAFATITYLAPNKTLIASLVYPSN----------QTTFSVAASVDLKEILPEW  210 (239)
T ss_dssp             SSSCSEEEE-----------CCCCTTCCEEEEEEEEGGGTEEEEEEEETTT----------TEEEEEEEECCHHHHSCSE
T ss_pred             CccccceEc-----------ccccCCCEEEEEEEEeCCCcEEEEEEccCCC----------CCcceEEEEechHHhCCcc
Confidence            999988876           4588999999999999999999999987543          4568999999999999999


Q ss_pred             ceeeEeecCCce--eeeEEEeccccccC
Q 035655          255 MYVGFSASTGRK--VSSHFILGWSFSMN  280 (670)
Q Consensus       255 ~~vGFsastg~~--~~~h~i~sW~fs~~  280 (670)
                      ||||||||||..  .|.|+|++|+|+++
T Consensus       211 v~VGFSAsTG~~~~~~~h~IlsWsF~s~  238 (239)
T 1dbn_A          211 VRVGFSAATGYPTEVETHDVLSWSFTST  238 (239)
T ss_dssp             EEEEEEEEECSGGGCCCCEEEEEEEEEE
T ss_pred             EEEEEEeccCCCccceeeEEEEEEeEec
Confidence            999999999998  99999999999864

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A*

Probab=100.00  E-value=1.7e-61  Score=483.25  Aligned_cols=225  Identities=31%  Similarity=0.540  Sum_probs=201.3

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC-----CCeEEEEEecCceeeecCCCCCCCCCCccceeEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA-----HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCF   97 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F   97 (670)
                      ..++|+|++|.+...+   |.++|+|.+.++|.|+||++.     .++.|||+|++||+|||+.+|     +++||+|+|
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~tg-----~vaSFsT~F   73 (237)
T 1fny_A            2 GSLSFSFPKFAPNQPY---LINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTG-----NVASFVTSF   73 (237)
T ss_dssp             EEEEEEESSCCTTCTT---EEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTC-----CBCEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---eEEcccEEeccCCeEEecCCcCCCcccCceEEEEeCCCEecccCCCC-----CccceEEEE
Confidence            3578999999853356   999999999878999999876     689999999999999999998     899999999


Q ss_pred             EEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcc
Q 035655           98 VFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMK  177 (670)
Q Consensus        98 ~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~  177 (670)
                      +|+|.+++...+||||||||+|.+..| ++.||||||+|.++ +++.||+|||||||++| .+ |||++|||||||||+.
T Consensus        74 ~F~I~~~~~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~n-~~-~Dp~~nHVGIdvNsi~  149 (237)
T 1fny_A           74 TFIIQAPNPATTADGLAFFLAPVDTQP-LDLGGMLGIFKDGY-FNKSNQIVAVEFDTFSN-GD-WDPKGRHLGINVNSIE  149 (237)
T ss_dssp             EEECCCSSTTSCCEEEEEEEEETTCCC-CCCGGGTTTCC----CCTTSCCEEEEEECSCC-TT-TCCSSSEEEEEESSSS
T ss_pred             EEEEeCCCCCCCCCCEEEEeccCCCCC-CCCCCcccccccCC-CCccccEEEEEeecccC-cc-cCCCCCceEEecCCcc
Confidence            999998877789999999999987654 58999999999764 47799999999999999 67 8999999999999999


Q ss_pred             cccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccccccccee
Q 035655          178 SIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYV  257 (670)
Q Consensus       178 s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~v  257 (670)
                      |.++++           ++|.+|+.++|||+||+.+++|+|+|++.+.          |..|+|++.+||+++|||+|||
T Consensus       150 S~~~~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~v~V  208 (237)
T 1fny_A          150 SIKTVP-----------WNWTNGEVANVFISYEASTKSLTASLVYPSL----------ETSFIIDAIVDVKIVLPEWVRF  208 (237)
T ss_dssp             CSEEEE-----------CCCCTTCCEEEEEEEEGGGTEEEEEEEETTT----------TEEEEEEEECCHHHHSCSEEEE
T ss_pred             cccccc-----------ccccCCCEEEEEEEEeCCCcEEEEEEecCCC----------CCcceEEEEechHHhCCCcEEE
Confidence            988876           4588999999999999999999999987543          5578999999999999999999


Q ss_pred             eEeecCCce---eeeEEEeccccccC
Q 035655          258 GFSASTGRK---VSSHFILGWSFSMN  280 (670)
Q Consensus       258 GFsastg~~---~~~h~i~sW~fs~~  280 (670)
                      |||||||..   .|.|+|++|+|+++
T Consensus       209 GFSAsTG~~~~~~~~h~IlsWsF~s~  234 (237)
T 1fny_A          209 GFSATTGIDKGYVQTNDVLSWSFESN  234 (237)
T ss_dssp             EEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             EEEEeeCCCCcccceeEEEEEEEEEe
Confidence            999999998   99999999999875

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A*

Probab=100.00  E-value=7.5e-61  Score=480.04  Aligned_cols=227  Identities=28%  Similarity=0.429  Sum_probs=204.1

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC---CCeEEE-EEecCceeeecCCCCCCCCCCccceeEEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA---HNVIGH-AFYNKPIQMLDKSTSLSSKPNASSFSTCFV   98 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~---~~~~Gr-~~y~~pv~l~~~~~~~~~~~~~~sFst~F~   98 (670)
                      ..++|+|++|.+...+   |.++|+|.+.++|.|+||++.   .++.|| |+|++||+|||+.++     +++||+|+|+
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gr~a~y~~Pv~l~~~~tg-----~vaSFsT~F~   73 (242)
T 1fx5_A            2 DDLSFKFKNFSQNGKD---LSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTG-----ELASFITSFS   73 (242)
T ss_dssp             CEEEEEESSCCTTCSS---EEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTT-----EECEEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---eEEcccEEeccCCcEEecCCCCcccCCccCEEEeCCCEEeecCCCC-----CccceEEEEE
Confidence            4689999999853356   999999999878999999886   689999 999999999999998     8999999999


Q ss_pred             EEEecC-CCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCC-CCCCCCeeEEecCCc
Q 035655           99 FQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNET-SDSQGNHVGINVNSM  176 (670)
Q Consensus        99 f~i~~~-~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~-~Dp~~~Hvgidvns~  176 (670)
                      |+|.++ +...+||||||||+|....| ++.||||||+|.++ +++.||+|||||||++| .++ |||++|||||||||+
T Consensus        74 F~I~~~~~~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~-~~~~n~~vAVEFDT~~N-~~~~~Dp~~nHVGIdvNs~  150 (242)
T 1fx5_A           74 FFMETSANPKAATDGLTFFLAPPDSPL-RRAGGYFGLFNDTK-CDSSYQTVAVEFDTIGS-PVNFWDPGFPHIGIDVNCV  150 (242)
T ss_dssp             EEEEESSCGGGCCCEEEEEEECTTCCC-CBCGGGTTTBSSSC-CCGGGCCEEEEEECCCT-TTSTTSCSSCEEEEEESSS
T ss_pred             EEEecCCCCCCCCCcEEEEEecCCCCC-CCCCCcccccccCC-CCccCcEEEEEeccccC-cccccCCCCCeEEEecCCc
Confidence            999987 56678999999999987654 48899999999765 47789999999999999 787 999999999999999


Q ss_pred             ccccccccccccCCCccccccCCC--CcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccccccc
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESG--DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQET  254 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g--~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~  254 (670)
                      +|.++++           ++|.+|  +.++|||+||+.+++|+|+|++.+.          |..|+|++.+||+++|||+
T Consensus       151 ~S~~~~~-----------~~l~~G~~~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~  209 (242)
T 1fx5_A          151 KSINAER-----------WNKRYGLNNVANVEIIYEASSKTLTASLTYPSD----------QTSISVTSIVDLKEILPEW  209 (242)
T ss_dssp             SCSEEEE-----------CCCCCSGGGCEEEEEEEETTTTEEEEEEEETTT----------TEEEEEEEECCGGGTSCSE
T ss_pred             cccceec-----------ccccCCCceeEEEEEEEeCCCCEEEEEEecCCC----------CccceeeEEechHHhCCcc
Confidence            9988876           457899  9999999999999999999987543          4568999999999999999


Q ss_pred             ceeeEeecC--CceeeeEEEeccccccCCC
Q 035655          255 MYVGFSAST--GRKVSSHFILGWSFSMNGA  282 (670)
Q Consensus       255 ~~vGFsast--g~~~~~h~i~sW~fs~~~~  282 (670)
                      |||||||||  |.. |.|+|++|+|+++..
T Consensus       210 v~VGFSAsT~~G~~-~~h~IlsWsF~s~l~  238 (242)
T 1fx5_A          210 VSVGFSGSTYIGRQ-ATHEVLNWYFTSTFI  238 (242)
T ss_dssp             EEEEEEEEEETTSC-EEEEEEEEEEEEESS
T ss_pred             EEEEEEecccCCCc-ceeEEEEEEeEeecc
Confidence            999999999  999 999999999998643

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ...

Probab=100.00  E-value=6.4e-61  Score=477.56  Aligned_cols=223  Identities=28%  Similarity=0.509  Sum_probs=203.3

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCC-CCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDN-AHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQI  101 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~-~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i  101 (670)
                      ..++|+|++|++...+   |.++|+|.+.++|.|+||++ ..++.|||+|++||+|||+.+|     +++||+|+|+|+|
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~Gra~y~~Pi~l~~~~tg-----~vaSFsT~F~F~I   73 (232)
T 1v6i_A            2 ETVSFNFNSFSEGNPA---INFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG-----NVASFLTSFSFEM   73 (232)
T ss_dssp             EEEEEEESSCCTTCTT---EEEEESCEECTTSCEECSCTTSTTCEEEEEESSCEECBCTTTC-----CBCEEEEEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---eEEcccEEEccCCcEEeCCCCCCCceEEEEeCCCEEeecCCCC-----CccceEEEEEEEE
Confidence            3579999999853356   99999999987899999998 8899999999999999999998     8999999999999


Q ss_pred             ecCCCCCCCCcEEEEEcCCCC-CCCCC-CCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcccc
Q 035655          102 VTPNSGQGGFGLAFTVSPQPS-FPGGK-AEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSI  179 (670)
Q Consensus       102 ~~~~~~~~g~GlaF~l~~~~~-~~~~~-~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~  179 (670)
                      .+++...+||||||||+|.+. +|.++ .||||||+|.    ++.||+|||||||++| .++|||++|||||||||++|.
T Consensus        74 ~~~~~~~~gdGlAF~l~p~~~~~p~~~~~g~~LGl~n~----~~~~~~vAVEFDT~~n-~~~~Dp~~nHVGIdvns~~S~  148 (232)
T 1v6i_A           74 KDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDT----KGAGHFVGVEFDTYSN-SEYNDPPTDHVGIDVNSVDSV  148 (232)
T ss_dssp             ECCSSSBCCCEEEEEEEETTCCCCTTCCCGGGTTTSCT----TSEEEEEEEEEECSCC-GGGTCCSSCEEEEEEEESSCS
T ss_pred             ecCCCCCCCCCEEEEEecCCCCCCCCcCCCcccccccC----CCcccEEEEEeecccc-cccCCCCCCeEEEEcCCcccc
Confidence            988777899999999999874 68888 9999999986    5679999999999999 889999999999999999998


Q ss_pred             cccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeE
Q 035655          180 KLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF  259 (670)
Q Consensus       180 ~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGF  259 (670)
                      ++++           ++|.+|+.++|||+||+.+++|+|+|++ +          +|..|+|++.+||+++|||+|||||
T Consensus       149 ~~~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~-~----------~~~~~~ls~~vdL~~~l~e~v~VGF  206 (232)
T 1v6i_A          149 KTVP-----------WNSVSGAVVKVTVIYDSSTKTLSVAVTN-D----------NGDITTIAQVVDLKAKLPERVKFGF  206 (232)
T ss_dssp             EEEE-----------CCCCTTCEEEEEEEEETTTTEEEEEEEC-T----------TSCEEEEEEECCHHHHSCSEEEEEE
T ss_pred             cccc-----------ccccCCCEEEEEEEEeCCCcEEEEEEec-C----------CCCcceEEEEechHHhCCccEEEEE
Confidence            8876           4588999999999999999999999987 4          3567899999999999999999999


Q ss_pred             eecCCc--eeeeEEEeccccccCC
Q 035655          260 SASTGR--KVSSHFILGWSFSMNG  281 (670)
Q Consensus       260 sastg~--~~~~h~i~sW~fs~~~  281 (670)
                      | |||.  ..|.|+|++|+|+++.
T Consensus       207 S-sTG~~~~~~~h~IlsWsF~s~l  229 (232)
T 1v6i_A          207 S-ASGSLGGRQIHLIRSWSFTSTL  229 (232)
T ss_dssp             E-EECCSSBCCEEEEEEEEEEEEE
T ss_pred             E-ecCCCccccEEEEEEEEEEeec
Confidence            9 9998  6999999999999763

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A*

Probab=100.00  E-value=3.6e-60  Score=475.10  Aligned_cols=226  Identities=31%  Similarity=0.520  Sum_probs=204.8

Q ss_pred             CCceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC---CCeEEEEEecCceeeecCCCCCCCCCCccceeEEEE
Q 035655           22 QQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA---HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFV   98 (670)
Q Consensus        22 ~~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~---~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~   98 (670)
                      +..++|+|++|.+...+   |.++|+|.+.++|.|+||++.   .++.|||+|++||+|||+.++     +++||+|+|+
T Consensus         3 ~~~~~F~f~~F~~~~~~---l~l~G~A~i~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~tg-----~vasFsT~F~   74 (242)
T 1qnw_A            3 SDDLSFNFDKFVPNQKN---IIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITG-----KVASFATSFS   74 (242)
T ss_dssp             CCSEEEEESSCCTTCTT---EEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTC-----CBCEEEEEEE
T ss_pred             ccceEEEcCCCCCCCCC---eEEccceEEccCCcEEecCCCCcccCCeEEEEeCCCEeeecCCCC-----CcccEEEEEE
Confidence            45789999999853356   999999999878999999986   689999999999999999998     8999999999


Q ss_pred             EEEecCCCCCCCCcEEEEEcCCCC-CCCCCCCcccccccCCCCCCCCCcEEEEEeeec----CCCCCCCCCCCCeeEEec
Q 035655           99 FQIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTV----NGYNETSDSQGNHVGINV  173 (670)
Q Consensus        99 f~i~~~~~~~~g~GlaF~l~~~~~-~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~----~n~~~~~Dp~~~Hvgidv  173 (670)
                      |+|.++ ...+||||||||+|.+. +|.++.||||||+|.++ +++.+|+|||||||+    +| .  |||++|||||||
T Consensus        75 F~I~~~-~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~~~~~N-~--~Dp~~nHVGIdv  149 (242)
T 1qnw_A           75 FVVKAD-KSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSD-SKSSNQIIAVEFDTYFGKAYN-P--WDPDFKHIGIDV  149 (242)
T ss_dssp             EECCBS-SSCCCCEEEEEEEETTCCCCTTCCGGGTTTCSSSS-CCTTSCCEEEEEECCCCTTTC-T--TSCSSCEEEEEE
T ss_pred             EEEecC-CCCCCCCEEEEEecCCCCCCcCCCCCcccccccCC-CCccccEEEEEeecccccccC-C--CCCCCCcEEEec
Confidence            999987 67789999999999874 68889999999999765 477899999999999    88 4  899999999999


Q ss_pred             CCcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccc
Q 035655          174 NSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQE  253 (670)
Q Consensus       174 ns~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~  253 (670)
                      ||+.|.++++           ++|.+|+.++|||+||+.+++|+|+|++.+.          |..|+|++.+||+++|||
T Consensus       150 Ns~~S~~~~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e  208 (242)
T 1qnw_A          150 NSIKSIKTVK-----------WDWRNGEVADVVITYRAPTKSLTVCLSYPSD----------GTSNIITASVDLKAILPE  208 (242)
T ss_dssp             SSSSCSEEEE-----------CCCCTTCCEEEEEEEEGGGTEEEEEEECTTT----------CCEEEEEEECCHHHHSCS
T ss_pred             CCccccceec-----------ccccCCCEEEEEEEEeCCCcEEEEEEecCCC----------CcceeEEEeechHHhcCC
Confidence            9999988876           4588999999999999999999999986543          567899999999999999


Q ss_pred             cceeeEeecCCce--eeeEEEeccccccCC
Q 035655          254 TMYVGFSASTGRK--VSSHFILGWSFSMNG  281 (670)
Q Consensus       254 ~~~vGFsastg~~--~~~h~i~sW~fs~~~  281 (670)
                      +||||||||||..  .|.|+|++|+|+++.
T Consensus       209 ~v~VGFSAsTG~~~~~~~h~IlsWsF~s~l  238 (242)
T 1qnw_A          209 WVSVGFSGGVGNAAEFETHDVLSWYFTSNL  238 (242)
T ss_dssp             EEEEEEEEEESCGGGCBCCEEEEEEEEEEC
T ss_pred             ceEEEEEeccCCCccceEEEEEEEEeEeec
Confidence            9999999999999  999999999999864

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A*

Probab=100.00  E-value=3.3e-60  Score=475.07  Aligned_cols=225  Identities=31%  Similarity=0.533  Sum_probs=200.9

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      ..++|+|++|.+...+   |.++|+|.+.++|.|+||++.      .++.|||+|++||+|||+.++     +++||+|+
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg-----~vaSFsT~   73 (239)
T 1gzc_A            2 ETISFSFSEFEPGNDN---LTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTG-----TVASFETR   73 (239)
T ss_dssp             EEEEEEESSCCTTCTT---EEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTC-----CBCEEEEE
T ss_pred             eeEEEEeCCCCCCCCC---eEEcccEEEcCCCcEEeCCCCcCCcccCCceEEEEeCCCEecccCCCC-----CccceEEE
Confidence            3579999999853356   999999999878999999876      579999999999999999998     89999999


Q ss_pred             EEEEEecCC-CCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCC
Q 035655           97 FVFQIVTPN-SGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNS  175 (670)
Q Consensus        97 F~f~i~~~~-~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns  175 (670)
                      |+|+|.+++ ...+||||||||+|....| ++.||||||+|.++ +++.||+|||||||++| . +.||++|||||||||
T Consensus        74 F~F~I~~~~~~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~n-~-~dDp~~nHVGIdvns  149 (239)
T 1gzc_A           74 FSFSIEQPYTRPLPADGLVFFMGPTKSKP-AQGYGYLGVFNNSK-QDNSYQTLAVEFDTFSN-P-WDPPQVPHIGIDVNS  149 (239)
T ss_dssp             EEEECCCCCSSSCCCEEEEEEEECSSCCC-CCCGGGTTTCSSSS-CCGGGCCEEEEEECSCC-T-TSCSSSSEEEEEESS
T ss_pred             EEEEEeCCCCCCCCCCcEEEEEecCCCCC-CCCCCcccccccCC-CCccccEEEEEEecccc-c-CCCCCCCeEEEecCC
Confidence            999999876 6678999999999987654 58999999999764 47789999999999999 5 556999999999999


Q ss_pred             cccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccc
Q 035655          176 MKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETM  255 (670)
Q Consensus       176 ~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~  255 (670)
                      +.|.++++           ++|.+|+.++|||+||+.+++|+|+|++.+.          |..|+|++.+||+++|||+|
T Consensus       150 ~~S~~~~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~v  208 (239)
T 1gzc_A          150 IRSIKTQP-----------FQLDNGQVANVVIKYDAPSKILHVVLVYPSS----------GAIYTIAEIVDVKQVLPDWV  208 (239)
T ss_dssp             SSCSEEEE-----------CCCCTTCEEEEEEEEETTTTEEEEEEECTTT----------CCEEEEEEECCHHHHSCSEE
T ss_pred             cccccccc-----------ccccCCCEEEEEEEEeCCCcEEEEEEecCCC----------CccceEEEEechHHhCCCce
Confidence            99988765           4588999999999999999999999986543          55789999999999999999


Q ss_pred             eeeEeecCCc---eeeeEEEeccccccC
Q 035655          256 YVGFSASTGR---KVSSHFILGWSFSMN  280 (670)
Q Consensus       256 ~vGFsastg~---~~~~h~i~sW~fs~~  280 (670)
                      |||||||||.   ..|.|+|++|+|+++
T Consensus       209 ~VGFSAsTG~~~~~~~~h~IlsWsF~s~  236 (239)
T 1gzc_A          209 DVGLSGATGAQRDAAETHDVYSWSFQAS  236 (239)
T ss_dssp             EEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             EEEEEeccCCCccccceEEEEEEEeEEe
Confidence            9999999997   489999999999875

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A*

Probab=100.00  E-value=5.6e-60  Score=477.89  Aligned_cols=242  Identities=30%  Similarity=0.457  Sum_probs=201.6

Q ss_pred             CceeEEeCCCC-CCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeE
Q 035655           23 QKEEFIFNGFN-ETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFST   95 (670)
Q Consensus        23 ~~~~f~~~~f~-~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst   95 (670)
                      ..++|+|++|. +...+   |.++|+|.+. +|.|+||++.      .++.|||+|++||+|||+.+|     +++||+|
T Consensus         3 ~~~~F~f~~F~~~~~~~---l~l~GdA~v~-~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg-----~vasFsT   73 (257)
T 1hql_A            3 DSVSFTFPNFWSDVEDS---IIFQGDANTT-AGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTE-----SVASFYT   73 (257)
T ss_dssp             -CCEEEESCSCSCGGGT---EEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTC-----CCCEEEE
T ss_pred             cceEEEcCCCCCCCCCC---EEEccceEec-CCcEEecCCccCCcccCCCeEEEEECCCEecccCCCC-----CeeceEE
Confidence            45899999998 22256   9999999998 9999999875      579999999999999999998     8999999


Q ss_pred             EEEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCC-CCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecC
Q 035655           96 CFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTN-DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVN  174 (670)
Q Consensus        96 ~F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~-~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvn  174 (670)
                      +|+|+|.++ ...+||||||||+|.... .++.||||||+|.++ ++++.||+|||||||++| .++.||++||||||||
T Consensus        74 ~F~F~I~~~-~~~~gdGlAF~l~p~~~~-~~~~g~~LGl~n~~~~~~~~~n~~vAVEFDT~~N-~~~~Dp~~nHVGIdvN  150 (257)
T 1hql_A           74 EFTFFLKIT-GNGPADGLAFFLAPPDSD-VKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTN-PNFPEPSYRHIGINVN  150 (257)
T ss_dssp             EEEEEEEEC-SSCCCCEEEEEEECTTCC-CCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCC-SSSCCCSSCEEEEEES
T ss_pred             EEEEEEecC-CCCCCCcEEEEEecCCCC-CCCCCccccccccccccCCccCceEEEEeccccc-ccccCCCCCceeeeeC
Confidence            999999987 677899999999998764 458899999999875 367889999999999999 7777999999999999


Q ss_pred             CcccccccccccccCCCcccc-ccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccc
Q 035655          175 SMKSIKLEPAAYYENGTKEDF-TLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQE  253 (670)
Q Consensus       175 s~~s~~~~~~~~~~~~~~~~~-~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~  253 (670)
                      |+.|.+++++.         + +|.+|+.++|||+||+.+++|+|+|++.+.           ..|+|++.+||+.+|||
T Consensus       151 s~~S~~s~~~~---------~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~-----------~~~~ls~~vdL~~~l~e  210 (257)
T 1hql_A          151 SIVSVATKRWE---------DSDIFSGKIATARISYDGSAEILTVVLSYPDG-----------SDYILSHSVDMRQNLPE  210 (257)
T ss_dssp             SSSCSEEEECC---------HHHHTSCSCEEEEEEEETTTTEEEEEEEETTT-----------EEEEEEEECCGGGTSCS
T ss_pred             CccccceeccC---------cccccCCceEEEEEEEeCCCCEEEEEEecCCC-----------CceeeEEeechHHhcCC
Confidence            99999887731         2 255799999999999999999999987532           35799999999999999


Q ss_pred             cceeeEeecCC-ceeeeEEEeccccccCCCCCCCCCCCCCCCCC
Q 035655          254 TMYVGFSASTG-RKVSSHFILGWSFSMNGAAPSLNLSQIPSLPI  296 (670)
Q Consensus       254 ~~~vGFsastg-~~~~~h~i~sW~fs~~~~~~~l~~s~~p~~p~  296 (670)
                      +|||||||||| ...|.|+|++|+|+++...+..+.+.+|.+|.
T Consensus       211 ~~~vGFSAsTG~~~~~~H~IlsWsF~s~~~~~~~~~~~~p~~~~  254 (257)
T 1hql_A          211 SVRVGISASTGNNQFLTVYILSWRFSSNLQSTSVKAAMEPEITR  254 (257)
T ss_dssp             EEEEEEEEECCSCCCEEEEEEEEEEEEEC---------------
T ss_pred             ceEEEEEeccCCCccceeEEEEEEeEecCCCCCcccccCCCCCc
Confidence            99999999999 99999999999999998888888888887763

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus}

Probab=100.00  E-value=9.9e-60  Score=469.08  Aligned_cols=220  Identities=28%  Similarity=0.459  Sum_probs=200.2

Q ss_pred             eeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCC--CCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEe
Q 035655           25 EEFIFNGFNETKTNQGLITRERASILKPSGALRLTDN--AHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIV  102 (670)
Q Consensus        25 ~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~--~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~  102 (670)
                      ++|+|++|. ...+   |.++|+|.+.++|.|+||++  ..++.|||+|++||+|||+.++     +++||+|+|+|+|.
T Consensus         1 ~sF~f~~F~-~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~Gra~y~~Pv~l~~~~tg-----~vaSFsT~F~F~I~   71 (234)
T 2eig_A            1 VSFNYTRFK-DDGS---LIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATG-----NVASFITSFSFIVS   71 (234)
T ss_dssp             CEEEESSCC-SSSS---EEEEETCEEEGGGEEESSSCGGGSSEEEEEEESSCEECBCTTTC-----CBCEEEEEEEEEEE
T ss_pred             CeEEcCCCC-CCCC---eEEcccEEEcCCCCeeeCCCCCccCceEEEEeCCCEEeecCCCC-----CccceEEEEEEEEe
Confidence            479999998 2256   99999999977899999998  7789999999999999999998     89999999999999


Q ss_pred             cCCCCCCCCcEEEEEcCCCC-CCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCC---CeeEEecCCccc
Q 035655          103 TPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQG---NHVGINVNSMKS  178 (670)
Q Consensus       103 ~~~~~~~g~GlaF~l~~~~~-~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~---~Hvgidvns~~s  178 (670)
                      +++...+||||||||+|.+. +|.++.||||||+|.+   ++.||+|||||||++| .  |||++   |||||||||+.|
T Consensus        72 ~~~~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~---~~~~~~vAVEFDT~~N-~--~Dp~~~~~nHVGIdvNsi~S  145 (234)
T 2eig_A           72 NVQRYPPTDGVVFFLAPWGTEIPPNSQGGYLGITDSS---NSQNQFVAVEFDSHPN-V--WDPKSLRSSHIGIDVNSIMS  145 (234)
T ss_dssp             ECTTSCCCCEEEEEEEETTCCCCTTCCGGGTTTCCTT---CSCCCCEEEEEECSCC-T--TSCTTTCSSEEEEEESSSSC
T ss_pred             CCCCCCCCCcEEEEEecCCCCCCcCCCCCccccccCC---CccccEEEEEeccccC-c--cCCCCCCCCceEEecCCccc
Confidence            88777899999999999874 7888999999999875   6689999999999999 4  89999   999999999999


Q ss_pred             ccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceee
Q 035655          179 IKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVG  258 (670)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vG  258 (670)
                      .++++           ++|.+|+.++|||+||+.+++|+|+|++ +.          |..|+|++.+||+++|||+||||
T Consensus       146 ~~~~~-----------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~-~~----------~~~~~ls~~vdL~~~l~e~v~VG  203 (234)
T 2eig_A          146 LKAVN-----------WNRVSGSLEKATIIYDSDTKILTVVMTH-QN----------GQITTISQEIDLKTVLPEKVSVG  203 (234)
T ss_dssp             SEEEE-----------CCCCTTCCEEEEEEEETTTTEEEEEEEE-TT----------SCEEEEEEECCHHHHSCSEEEEE
T ss_pred             cceec-----------ccccCCCEEEEEEEEeCCCcEEEEEEec-CC----------CCcceEeEeechHHhcCCceEEE
Confidence            88876           4578999999999999999999999998 43          55789999999999999999999


Q ss_pred             EeecC--CceeeeEEEeccccccCCC
Q 035655          259 FSAST--GRKVSSHFILGWSFSMNGA  282 (670)
Q Consensus       259 Fsast--g~~~~~h~i~sW~fs~~~~  282 (670)
                      |||||  |.. |.|+|++|+|+++..
T Consensus       204 FSAsT~~G~~-~~h~IlsWsF~s~l~  228 (234)
T 2eig_A          204 FSATTWNPER-ERHDIYSWSFTSTLK  228 (234)
T ss_dssp             EEEEECSSCC-EEEEEEEEEEEEECC
T ss_pred             EEeeecCCCc-ceeEEEEEEEEecCC
Confidence            99999  998 999999999998743

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A*

Probab=100.00  E-value=1.6e-59  Score=472.98  Aligned_cols=223  Identities=32%  Similarity=0.545  Sum_probs=201.4

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      ..++|+|++|.+...+   |.++|+|.+.++|.|+||++.      .++.|||+|++||+|||+.+|     +++||+|+
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~GdA~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg-----~vaSFsT~   73 (253)
T 1sbf_A            2 ETVSFSWNKFVPKQPN---MILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETG-----SVASFAAS   73 (253)
T ss_dssp             EEEEEEESSCCTTCTT---EEEEETCEECTTSCEECSCBCTTSCBCTTCEEEEEESSCEECBCTTTC-----CBCEEEEE
T ss_pred             cceEEEcCCCCCCCCC---eEEcccEEEcCCCeEEeCCCccCCcccCCCeEEEEECCCEecccCCCC-----cccceEEE
Confidence            3579999999853356   999999999778999999876      579999999999999999998     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      |+|+|.+++...+||||||||+|.+..| ++.||||||+|.+   ++.||+|||||||++| .  |||++|||||||||+
T Consensus        74 F~F~I~~~~~~~~gdGlAF~l~p~~~~~-~~~g~~LGL~n~~---~~~n~~vAVEFDT~~N-~--~Dp~~nHVGIdvNs~  146 (253)
T 1sbf_A           74 FNFTFYAPDTKRLADGLAFFLAPIDTKP-QTHAGYLGLFNEN---ESGDQVVAVEFDTFRN-S--WDPPNPHIGINVNSI  146 (253)
T ss_dssp             EEEEEECSSTTSCCEEEEEEEEETTCCC-CCCGGGTTTCCTT---SCCCSCEEEEEECSCC-T--TCCSSSEEEEEESSS
T ss_pred             EEEEEeCCCCCCCCCcEEEEEecCCCCC-CCCCCccccccCC---CcccceEEEEeccccC-C--CCCCCCcEEEEcCCc
Confidence            9999998877789999999999987654 5889999999876   6789999999999999 4  899999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .|.++++           ++|.+|+.++|||+||+.+++|+|+|++.+.          |..|+|++.+||+++|||+||
T Consensus       147 ~S~~t~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~~~  205 (253)
T 1sbf_A          147 RSIKTTS-----------WDLANNKVAKVLITYDASTSLLVASLVYPSQ----------RTSNILSDVVDLKTSLPEWVR  205 (253)
T ss_dssp             SCSEEEE-----------CCCCTTCCEEEEEEEETTTTEEEEEEEETTT----------TEEEEEEEECCHHHHSCSEEE
T ss_pred             cccceec-----------ccccCCCeeEEEEEEeCCCcEEEEEEecCCC----------CCcceEEEEechHHhCCCceE
Confidence            9988876           4588999999999999999999999987543          457899999999999999999


Q ss_pred             eeEeecCCce--eeeEEEeccccccCC
Q 035655          257 VGFSASTGRK--VSSHFILGWSFSMNG  281 (670)
Q Consensus       257 vGFsastg~~--~~~h~i~sW~fs~~~  281 (670)
                      ||||||||..  .|.|+|++|+|+++.
T Consensus       206 VGFSAsTG~~~~~~~H~IlsWsF~s~l  232 (253)
T 1sbf_A          206 IGFSAATGLDIPGESHDVLSWSFASNL  232 (253)
T ss_dssp             EEEEEEECSSSCCCEEEEEEEEEEEEE
T ss_pred             EEEEeccCCCccceeeEEEEEEeEeec
Confidence            9999999998  999999999999864

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1

Probab=100.00  E-value=3.6e-59  Score=467.53  Aligned_cols=226  Identities=29%  Similarity=0.520  Sum_probs=203.6

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEe
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIV  102 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~  102 (670)
                      ..++|+|++|.+...+   |.++|+|.. ++|.|+||++..++.|||+|++||+|||+.+|     +++||+|+|+|+|.
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~G~A~~-~~g~l~LT~~~~~~~G~a~y~~Pv~l~~~~~~-----~~~sFst~F~F~I~   72 (234)
T 2bqp_A            2 ETTSFLITKFSPDQQN---LIFQGDGYT-TKEKLTLTKAVKNTVGRALYSSPIHIWDRETG-----NVANFVTSFTFVIN   72 (234)
T ss_dssp             EEEEEEESSBCTTCTT---EEEEETCEE-ETBEEEEECSCTTCEEEEEESSCEECBCTTTC-----CBCEEEEEEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---EEEeeceec-CCCEEEeCCCCCCCEEEEEECCCEEcccCCCC-----ceeeEEEEEEEEEe
Confidence            3579999999853356   999999994 58999999999999999999999999999998     89999999999999


Q ss_pred             cCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCC--CCeeEEecCCccccc
Q 035655          103 TPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQ--GNHVGINVNSMKSIK  180 (670)
Q Consensus       103 ~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~--~~Hvgidvns~~s~~  180 (670)
                      +++...+||||||+|+|.+..|. +.|+||||+|.++ ++..||+|||||||++| .+ |||+  +|||||||||+.|.+
T Consensus        73 ~~~~~~~gdGlAF~l~p~~~~p~-~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~N-~~-~Dp~~~~nHVgIdvns~~S~~  148 (234)
T 2bqp_A           73 APNSYNVADGFTFFIAPVDTKPQ-TGGGYLGVFNSAE-YDKTTQTVAVEFDTFYN-AA-WDPSNRDRHIGIDVNSIKSVN  148 (234)
T ss_dssp             CSSTTSCCCEEEEEEEETTCCCC-CCGGGTTTCSCSS-CCGGGCCEEEEEECSCC-TT-TSCTTCCCEEEEEESSSSCSE
T ss_pred             CCCCCCCCCcEEEEEecCCCCCC-CCCCccccccccC-CCCCCcEEEEEEecccC-cc-cCCCCCCCceeEeeCCccccc
Confidence            88777899999999999877666 8899999999874 47789999999999999 67 7999  999999999999988


Q ss_pred             ccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCC---CCCCcccccccCCccccccccee
Q 035655          181 LEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFG---KPSQPLLSLPLDLSPAFQETMYV  257 (670)
Q Consensus       181 ~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~---~p~~~~ls~~~dl~~~l~~~~~v  257 (670)
                      +++           +++.+|+.++|||+||+.+++|+|+|++.+.        +   ||..|+|+..+||+.+|||+|||
T Consensus       149 s~~-----------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--------~~~~~p~~~~ls~~vdL~~~l~~~~yv  209 (234)
T 2bqp_A          149 TKS-----------WKLQNGEEANVVIAFNAATNVLTVSLTYPNN--------SLEEEVTSYTLSDVVSLKDVVPEWVRI  209 (234)
T ss_dssp             EEE-----------CCCCTTCEEEEEEEEETTTTEEEEEEEECC--------------CEEEEEEEECCGGGTSCSEEEE
T ss_pred             eEe-----------eEEcCCCEEEEEEEEeCCCCEEEEEEecCCC--------CcccCCCcceEEEEechHHhCCCceEE
Confidence            765           4577999999999999999999999998765        4   67889999999999999999999


Q ss_pred             eEeecCCceeeeEEEeccccccC
Q 035655          258 GFSASTGRKVSSHFILGWSFSMN  280 (670)
Q Consensus       258 GFsastg~~~~~h~i~sW~fs~~  280 (670)
                      |||||||...|.|+|++|+|+++
T Consensus       210 GFSAsTG~~~~~H~IlsWsF~s~  232 (234)
T 2bqp_A          210 GFSATTGAEYAAHEVLSWSFHSE  232 (234)
T ss_dssp             EEEEECSSSCCEEEEEEEEEEEE
T ss_pred             EEEeccCCCcccEEEEEEEEEee
Confidence            99999999999999999999874

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii}

Probab=100.00  E-value=6.4e-59  Score=466.96  Aligned_cols=226  Identities=27%  Similarity=0.437  Sum_probs=201.5

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCC------CeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH------NVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      ..++|+|++|.+...+   |.++|+|.+.++|.|+||++..      ++.|||+|++||+|||+ ++     +++||+|+
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~G~a~y~~Pv~l~~~-~g-----~~~sFst~   72 (240)
T 2fmd_A            2 NSVCFTFTDFESGQQD---LIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQS-SS-----LVASFETT   72 (240)
T ss_dssp             CEEEEEESSCCTTCTT---EEEEETCEECTTSCEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TC-----SEEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---eEEccceEEcCCCCEEeCCCCcCCcccCCCeEEEEECCCEEeeCC-CC-----CcCcEEEE
Confidence            4689999999853356   9999999997789999999875      79999999999999999 88     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCC-CCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCC
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGG-KAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNS  175 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~-~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns  175 (670)
                      |+|+|.++ ...+||||||+|+|.+..|.+ +.|+||||+|.+++++..||+|||||||++| .++|||++|||||||||
T Consensus        73 F~F~I~~~-~~~~gdGlAF~l~p~~~~p~~g~~g~~LGl~n~~~~~~~~n~~vAVEfDT~~N-~~~~Dp~~nHvgIdvns  150 (240)
T 2fmd_A           73 FTFSISQG-SSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNGVVSVEFDTYPN-TDIGDPNYRHIGIDVNS  150 (240)
T ss_dssp             EEEECCBS-SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCSCCC----CCCEEEEEEECSCC-GGGTCCSSCEEEEEESS
T ss_pred             EEEEEecC-CCCCCCcEEEEEecCCCCCCccCCCCcccccccCcCCCCcCcEEEEEeccccc-cccCCCCCCceeecccc
Confidence            99999987 677899999999998876665 8999999999887777899999999999999 78899999999999999


Q ss_pred             cccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccc
Q 035655          176 MKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETM  255 (670)
Q Consensus       176 ~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~  255 (670)
                      +.|.++++           +++.+|+.++|||+||+.+++|+|+|++.+.           ..|+|++.+||+.+||++|
T Consensus       151 ~~S~~s~~-----------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~-----------~~~~ls~~vdL~~~l~~~~  208 (240)
T 2fmd_A          151 IRSKAASK-----------WDWQNGKTATAHISYNSASKRLSVVSSYPNS-----------SPVVVSFDVELNNVBPBWV  208 (240)
T ss_dssp             SSCSEEEE-----------CCCCSSCEEEEEEEEETTTTEEEEEEECTTS-----------CCEEEEEECCGGGTSCSEE
T ss_pred             ccccceeE-----------EEeeCCCEEEEEEEEeCCCCEEEEEEecCCC-----------CceEEEEEechHHhCCCce
Confidence            99988765           3577999999999999999999999986432           3689999999999999999


Q ss_pred             eeeEeecCCceeeeEEEeccccccCC
Q 035655          256 YVGFSASTGRKVSSHFILGWSFSMNG  281 (670)
Q Consensus       256 ~vGFsastg~~~~~h~i~sW~fs~~~  281 (670)
                      |||||||||...|.|+|++|+|+++.
T Consensus       209 yvGFSAsTG~~~~~H~IlsWsF~s~~  234 (240)
T 2fmd_A          209 RVGFSATTGQYTQTNNILAWSFRSSL  234 (240)
T ss_dssp             EEEEEEECCSSCBCCEEEEEEEEEEE
T ss_pred             EEEEEeccCCccccEEEEEEEeEecC
Confidence            99999999999999999999999763

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A*

Probab=100.00  E-value=2.6e-59  Score=471.94  Aligned_cols=223  Identities=31%  Similarity=0.547  Sum_probs=202.1

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      ..++|+|++|..  .+   |.++|+|.+. +|.|+||++.      .++.|||+|++||+|||+.+|     +++||+|+
T Consensus         2 ~~~~F~f~~F~~--~~---l~l~GdA~v~-~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg-----~vaSFsT~   70 (253)
T 1g7y_A            2 DIQSFSFKNFNS--SS---FILQGDATVS-SSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTG-----AVASWATS   70 (253)
T ss_dssp             EEEEEEESSCCS--SC---EEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTC-----CBCEEEEE
T ss_pred             cceEEEcCCCCc--CC---EEEecceEEe-CCEEEeCCCCCCCccccCCeEEEEECCCEEeecCCCC-----CccceEEE
Confidence            357999999985  67   9999999998 9999999876      579999999999999999999     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      |+|+|.+++...+||||||||+|.+..| ++.||||||+|.++ ++..||+|||||||++| .+ |||++|||||||||+
T Consensus        71 F~F~I~~~~~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~-~~~~n~~vAVEFDT~~N-~~-~Dp~~nHVGIdvns~  146 (253)
T 1g7y_A           71 FTANIFAPNKSSSADGIAFALVPVGSEP-KSNSGFLGVFDSDV-YDNSAQTVAVEFDTFSN-TD-WDPTSRHIGIDVNSI  146 (253)
T ss_dssp             EEEECCCSSGGGCCCEEEEEEEETTCCC-CCCGGGTTTCSCSS-CCGGGCCEEEEEECSCC-TT-TCCSSCEEEEEESSS
T ss_pred             EEEEEecCCCCCCCCcEEEEEecCCCCC-CCCCCcccccccCC-CCccCceEEEEecceec-cC-cCCCCCcEeeccCCc
Confidence            9999998766678999999999987654 58899999999774 46789999999999999 67 899999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .|.++++           ++|.+|+.++|||+||+.+++|+|+|++.+.          |..|+|+..+||+++|||+||
T Consensus       147 ~S~~t~~-----------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~~~  205 (253)
T 1g7y_A          147 KSIRTAS-----------WGLANGQNAEILITYNAATSLLVASLVHPSR----------RTSYIVSERVDITNELPEYVS  205 (253)
T ss_dssp             SCSEEEE-----------CCCCTTSEEEEEEEEETTTTEEEEEEEETTT----------TEEEEEEEECCHHHHSCSEEE
T ss_pred             cccceec-----------cccCCCCeEEEEEEEeCCCCEEEEEEecCCC----------CCcceEEEEechHHhCCCceE
Confidence            9988876           4578999999999999999999999987543          557899999999999999999


Q ss_pred             eeEeecCCce---eeeEEEeccccccCC
Q 035655          257 VGFSASTGRK---VSSHFILGWSFSMNG  281 (670)
Q Consensus       257 vGFsastg~~---~~~h~i~sW~fs~~~  281 (670)
                      ||||||||..   .|.|+|++|+|+++.
T Consensus       206 VGFSAsTG~~~~~~~~H~IlsWsF~s~l  233 (253)
T 1g7y_A          206 IGFSATTGLSEGYTETHDVLSWSFASKL  233 (253)
T ss_dssp             EEEEEECCSSSSCCCCCEEEEEEEEEEE
T ss_pred             EEEEeCcCCCCcccceeEEEEEEEEeeC
Confidence            9999999998   999999999999864

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A*

Probab=100.00  E-value=3e-59  Score=471.25  Aligned_cols=222  Identities=35%  Similarity=0.580  Sum_probs=201.5

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      ..++|+|++|..  .+   |.++|+|.+.++|.|+||++.      .++.|||+|++||+|||+.+|     +++||+|+
T Consensus         2 ~~~~F~f~~F~~--~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg-----~vaSFsT~   71 (252)
T 1fat_A            2 NDIYFNFQRFNE--TN---LILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTG-----TVASFATS   71 (252)
T ss_dssp             CCEEEEESSCCG--GG---EEEEETCEECTTSCEECSCCC-CCCCCTTCEEEEEEEEEEECEETTTT-----EEEEEEEE
T ss_pred             cceEEEcCCCCc--CC---EEEeccEEECCCCEEEeCCCCCCCccccCCEEEEEECCCEecccCCCC-----cccceEEE
Confidence            468999999985  66   999999999778999999875      579999999999999999998     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      |+|+|.+++...+||||||||+|.+..| ++.||||||+|.+   ++.||+|||||||++| .+ |||++|||||||||+
T Consensus        72 F~F~I~~~~~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~---~~~~~~vAVEFDT~~N-~~-~Dp~~nHVGIdvNs~  145 (252)
T 1fat_A           72 FTFNIQVPNNAGPADGLAFALVPVGSQP-KDKGGFLGLFDGS---NSNFHTVAVEFDTLYN-KD-WDPTERHIGIDVNSI  145 (252)
T ss_dssp             EEEECCCCSSCBCCEEEEEEEEETTCCC-CCSGGGTTTCCSS---CCCCCCEEEEEECSCC-TT-TCCSSCEEEEEESSS
T ss_pred             EEEEEeCCCCCCCCCcEEEEEccCCCCC-CCCCccccccccC---CccCcEEEEEeecccC-CC-CCCCCCeEEEecCCc
Confidence            9999998876778999999999987654 5889999999976   6689999999999999 67 899999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .|.++++           +++.+|+.++|||+||+.+++|+|+|++.+.          |.+|+|++.+||+.+|||+||
T Consensus       146 ~S~~~~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~~~  204 (252)
T 1fat_A          146 RSIKTTR-----------WDFVNGENAEVLITYDSSTNLLVASLVYPSQ----------KTSFIVSDTVDLKSVLPEWVS  204 (252)
T ss_dssp             SCSEEEE-----------CCCCTTCEEEEEEEEETTTTEEEEEEEETTT----------TEEEEEEEECCHHHHSCSEEE
T ss_pred             cccceec-----------ccccCCCEEEEEEEEeCCCCEEEEEEecCCC----------CCcceEEEEechHHhCCCceE
Confidence            9988866           4578999999999999999999999987543          457899999999999999999


Q ss_pred             eeEeecCCce---eeeEEEeccccccCC
Q 035655          257 VGFSASTGRK---VSSHFILGWSFSMNG  281 (670)
Q Consensus       257 vGFsastg~~---~~~h~i~sW~fs~~~  281 (670)
                      ||||||||..   .|.|+|++|+|+++.
T Consensus       205 VGFSAsTG~~~~~~~~H~IlsWsF~s~l  232 (252)
T 1fat_A          205 VGFSATTGINKGNVETNDVLSWSFASKL  232 (252)
T ss_dssp             EEEEEEECSSTTBCCCCEEEEEEEEEEE
T ss_pred             EEEEeccCCCCcccceEEEEEEEEEeeC
Confidence            9999999998   999999999999864

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A*

Probab=100.00  E-value=5.3e-59  Score=466.67  Aligned_cols=222  Identities=34%  Similarity=0.543  Sum_probs=199.6

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC-----CCeEEEEEecCceeeecCCCCCCCCCCccceeEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA-----HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCF   97 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F   97 (670)
                      +.++|+|++|.+...+   |.++|+|.+.++|.|+||++.     .++.|||+|++||+|||+.+|     +++||+|+|
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg-----~vaSFsT~F   73 (242)
T 1wbf_A            2 KTISFNFNQFHQNEEQ---LKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTG-----NVASFETRF   73 (242)
T ss_dssp             CEEEEEESSCCTTCTT---EEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTC-----CBCEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---eEEccceEEccCCcEEecCcccCCcccCCeEEEEECCCEecccCCCC-----CeeeEEEEE
Confidence            4689999999853356   999999999778999999876     689999999999999999998     899999999


Q ss_pred             EEEEecC-CCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           98 VFQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        98 ~f~i~~~-~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      +|+|.++ +...+||||||||+|.... +++.||||||+|.+    +.||+|||||||++| .  |||++|||||||||+
T Consensus        74 ~F~I~~~~~~~~~gdGlAF~l~p~~~~-~~~~g~~LGl~n~~----~~~~~vAVEFDT~~N-~--~Dp~~nHVGIdvNs~  145 (242)
T 1wbf_A           74 SFSIRQPFPRPHPADGLVFFIAPPNTQ-TGEGGGYFGIYNPL----SPYPFVAVEFDTFRN-T--WDPQIPHIGIDVNSV  145 (242)
T ss_dssp             EEECCCSCCSSCCCEEEEEEEECSSCC-CCCCGGGTTTCCTT----SCCCCEEEEEECSCC-T--TCCSSSEEEEEESSS
T ss_pred             EEEEeCCCCCCCCCCcEEEEEecCCCC-CCCCCCccccccCC----CcCcEEEEEeccccC-C--CCCCCCeEEEECCCc
Confidence            9999987 5677899999999998764 45889999999865    678999999999999 4  899999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .|.++++           ++|.+|+.++|||+||+.+++|+|+|++.+.          |..|+|+..+||+++|||+||
T Consensus       146 ~S~~~~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~v~  204 (242)
T 1wbf_A          146 ISTKTVP-----------FTLDNGGIANVVIKYDASTKILHVVLVFPSL----------GTIYTIADIVDLKQVLPESVN  204 (242)
T ss_dssp             SCSEEEE-----------CCCCTTSCEEEEEEEETTTTEEEEEEEETTT----------TEEEEEEEECCHHHHSCSEEE
T ss_pred             cccceee-----------eEecCCCEEEEEEEEeCCCCEEEEEEccCCC----------CCcceEEEEechHHhcCCceE
Confidence            9988765           4688999999999999999999999987643          456899999999999999999


Q ss_pred             eeEeecC----Cce---eeeEEEeccccccCC
Q 035655          257 VGFSAST----GRK---VSSHFILGWSFSMNG  281 (670)
Q Consensus       257 vGFsast----g~~---~~~h~i~sW~fs~~~  281 (670)
                      |||||||    |..   .|.|+|++|+|+++.
T Consensus       205 VGFSAsTg~~~G~~~~~~~~h~IlsWsF~s~l  236 (242)
T 1wbf_A          205 VGFSAATGDPSGKQRNATETHDILSWSFSASL  236 (242)
T ss_dssp             EEEEEEECCGGGCCTTCCCCCEEEEEEEEEEC
T ss_pred             EEEEEeecCcCCccccccceEEEEEEEeEecC
Confidence            9999999    888   999999999999864

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A*

Probab=100.00  E-value=1.1e-58  Score=464.14  Aligned_cols=221  Identities=34%  Similarity=0.538  Sum_probs=199.2

Q ss_pred             ceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEEE
Q 035655           24 KEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCF   97 (670)
Q Consensus        24 ~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F   97 (670)
                      .++|+|++|.+...+   |.++|+|.+.++|.|+||++.      .++.|||+|++||+|||+.+|     +++||+|+|
T Consensus         2 ~~~F~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~~g-----~vasFsT~F   73 (238)
T 1f9k_A            2 TQSFNFDHFEENSKE---LNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTG-----NVASFETRF   73 (238)
T ss_dssp             EEEEEESSCCSSCTT---EEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTC-----CBCEEEEEE
T ss_pred             CeEEEcCCCCCCCCC---eEEccceEECcCCcEEecCccccCccccCCEEEEEECCCEEeecCCCC-----CeeeEEEEE
Confidence            578999999853356   999999999778999999876      579999999999999999998     899999999


Q ss_pred             EEEEecC-CCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           98 VFQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        98 ~f~i~~~-~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      +|+|.++ +...+||||||||+|.+..| ++.||||||+|.+   ++ +|+|||||||++| .  |||++|||||||||+
T Consensus        74 ~F~I~~~~~~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~---~~-~~~vAVEFDT~~N-~--~Dp~~nHVgIdvns~  145 (238)
T 1f9k_A           74 SFNITQPYAYPEPADGLTFFMVPPNSPQ-GEDGGNLGVFKPP---EG-DNAFAVEFDTFQN-T--WDPQVPHIGIDVNSI  145 (238)
T ss_dssp             EEEEECCCSSSCCCEEEEEEEECTTCCC-CCSGGGTTTCCSS---CC-SCCEEEEEECSCC-T--TCCSSSEEEEEESSS
T ss_pred             EEEEecCCCCCCCCCcEEEEEccCCCCC-CCCCCcccccccC---CC-CcEEEEEEecccC-C--CCCCCCeEEEecCCc
Confidence            9999987 66778999999999987654 5889999999876   45 9999999999999 4  899999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccc--c
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQE--T  254 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~--~  254 (670)
                      .|.++++           ++|.+|+.++|||+||+.+++|+|+|++.+.          |..|+|+..+||+++|||  +
T Consensus       146 ~S~~s~~-----------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~~~~~  204 (238)
T 1f9k_A          146 VSSKTLH-----------FQLENGGVANVVIKYDSPTKILNVVLAFHSV----------GTVYTLSNIVDLKQEFPNSEW  204 (238)
T ss_dssp             SCSEEEE-----------CCCCTTCCEEEEEEEETTTTEEEEEEEETTT----------TEEEEEEEECCHHHHSTTCSE
T ss_pred             cccceEe-----------ecccCCCEEEEEEEEeCCCCEEEEEEecCCC----------CCceeEEEEechHHhCCCCce
Confidence            9988765           4588999999999999999999999987543          456899999999999999  9


Q ss_pred             ceeeEeecCCce---eeeEEEeccccccCC
Q 035655          255 MYVGFSASTGRK---VSSHFILGWSFSMNG  281 (670)
Q Consensus       255 ~~vGFsastg~~---~~~h~i~sW~fs~~~  281 (670)
                      ||||||||||..   .|.|+|++|+|+++.
T Consensus       205 ~~vGFSAsTG~~~~~~~~h~IlsWsF~s~~  234 (238)
T 1f9k_A          205 VNVGLSATTGYQKNAVETHEIISWSFTSSL  234 (238)
T ss_dssp             EEEEEEEEECSSTTCCCEEEEEEEEEEEEC
T ss_pred             EEEEEEeCcCCCCcccceEEEEEeEeEeec
Confidence            999999999999   999999999999864

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1

Probab=100.00  E-value=1.5e-58  Score=461.83  Aligned_cols=222  Identities=30%  Similarity=0.538  Sum_probs=198.6

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC-----CCeEEEEEecCceeeecCCCCCCCCCCccceeEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA-----HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCF   97 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F   97 (670)
                      ..++|+|++|.+...+   |.++|+|.+.++|.|+||++.     .++.|||+|++||+|||+.+       ++||+|+|
T Consensus         2 ~~~~F~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~~-------~~sFsT~F   71 (233)
T 1n47_A            2 ESTSFSFTNFNPNQNN---LILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNTT-------LASFTTSF   71 (233)
T ss_dssp             EEEEEEESSCCTTCTT---EEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSSC-------BCEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---eEEccceEEccCCcEEeccCcCCCccCCCeEEEEECCCEeccCCCC-------cCCEEEEE
Confidence            3579999999853356   999999999778999999876     47999999999999998653       79999999


Q ss_pred             EEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcc
Q 035655           98 VFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMK  177 (670)
Q Consensus        98 ~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~  177 (670)
                      +|+|.+++...+||||||||+|.+..|. +.||||||+|.++ ++..||+|||||||++| .  |||++|||||||||+.
T Consensus        72 ~F~I~~~~~~~~gdGlAF~l~p~~~~p~-~~g~~LGl~n~~~-~~~~n~~vAVEFDT~~N-~--~Dp~~nHvGIdvns~~  146 (233)
T 1n47_A           72 SFVMAAPAAAAVADGLAFFLAPPDTQPQ-ARGGFLGLFADRA-HDASYQTVAVEFDTYSN-A--WDPNYTHIGIDTNGIE  146 (233)
T ss_dssp             EEECCCSSTTSCCEEEEEEEECTTCCCC-CCGGGTTTCSSSS-CCGGGCCEEEEEECSCC-T--TSCSSCEEEEEESSSS
T ss_pred             EEEEeCCCCCCCCCcEEEEEecCCCCCC-CCCCcccccccCC-CCccCceEEEEeccccC-C--CCCCCCcEEEccCCcc
Confidence            9999988767789999999999877665 8899999999774 57789999999999999 4  8999999999999999


Q ss_pred             cccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccccccccee
Q 035655          178 SIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYV  257 (670)
Q Consensus       178 s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~v  257 (670)
                      |.++++           +++.+|+.++|||+||+.+++|+|+|++.+.          |..|+|++.+||+++|||+|||
T Consensus       147 S~~~~~-----------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~~~~~v  205 (233)
T 1n47_A          147 SKKTTP-----------FDMVYGEKANIVITYQASTKALAASLVFPVS----------QTSYAVSARVDLRDILPEYVRV  205 (233)
T ss_dssp             CSEEEE-----------CCCCTTSCEEEEEEEETTTTEEEEEEEETTT----------TEEEEEEEECCGGGTSCSEEEE
T ss_pred             cccccc-----------ccccCCCEEEEEEEEeCCCCEEEEEEecCCC----------CCcceEEEEechHHhCCCceEE
Confidence            988765           4678999999999999999999999987654          3468999999999999999999


Q ss_pred             eEeecCCce---eeeEEEeccccccC
Q 035655          258 GFSASTGRK---VSSHFILGWSFSMN  280 (670)
Q Consensus       258 GFsastg~~---~~~h~i~sW~fs~~  280 (670)
                      |||||||..   .|.|+|++|+|+++
T Consensus       206 GFSAsTG~~~~~~~~h~IlsWsF~s~  231 (233)
T 1n47_A          206 GFSATTGLNAGVVETHDIVSWSFAVS  231 (233)
T ss_dssp             EEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             EEEeccCCCccccceeEEEEEEEEee
Confidence            999999998   99999999999874

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A*

Probab=100.00  E-value=1.8e-58  Score=463.67  Aligned_cols=223  Identities=28%  Similarity=0.429  Sum_probs=198.6

Q ss_pred             CceeEEeCCC----CCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccc
Q 035655           23 QKEEFIFNGF----NETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASS   92 (670)
Q Consensus        23 ~~~~f~~~~f----~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~s   92 (670)
                      +.++|+|++|    .+...+   |.++|+|.+. +|.|+||++.      .++.|||+|++||+||| .++     +++|
T Consensus         2 ~~~~F~f~~F~~~~~~~~~~---l~l~GdA~i~-~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~-~tg-----~vas   71 (243)
T 1gsl_A            2 NTVNFTYPDFWSYSLKNGTE---ITFLGDATRI-PGALQLTKTDANGNPVRSSAGQASYSEPVFLWD-STG-----KAAS   71 (243)
T ss_dssp             CCCEEEESCCCCTTCCTTSS---EEEEETCEEE-TTEEECSCBCTTSCBCSSEEEEEEESSCEECBC-TTS-----CBCE
T ss_pred             cceEEEcCCCccccCCCCCC---EEEccceEec-CCcEEecCCccCCcccCCCeEEEEECCCEEccC-CCC-----CcCc
Confidence            4679999999    532345   9999999998 9999999876      57999999999999999 888     8999


Q ss_pred             eeEEEEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCC-CCCCCcEEEEEeeecCCCCCCCCCCCCeeEE
Q 035655           93 FSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND-HKPSNHLFAIEFDTVNGYNETSDSQGNHVGI  171 (670)
Q Consensus        93 Fst~F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~-~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgi  171 (670)
                      |+|+|+|+|.++ ...+||||||||+|.+.. +++.||||||+|.+++ +++.||+|||||||++| .++.||++|||||
T Consensus        72 FsT~F~F~I~~~-~~~~gdGlAF~l~p~~~~-~~~~g~~LGl~n~~~~~~~~~n~~vAVEFDT~~N-~~~~Dp~~nHvGI  148 (243)
T 1gsl_A           72 FYTSFTFLLKNY-GAPTADGLAFFLAPVDSS-VKDYGGFLGLFRHETAADPSKNQVVAVEFDTWIN-KDWNDPPYPHIGI  148 (243)
T ss_dssp             EEEEEEEEEEES-SSSCBCEEEEEEEETTCC-CCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCC-GGGTCCSSCEEEE
T ss_pred             eEEEEEEEEecC-CCCCCCCEEEEEecCCCC-CCCCCCcccccccccccCCccCcEEEEEeccccc-cccCCCCCCceee
Confidence            999999999987 667899999999998764 4588999999998764 67889999999999999 7777999999999


Q ss_pred             ecCCcccccccccccccCCCccccccCC---CCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCc
Q 035655          172 NVNSMKSIKLEPAAYYENGTKEDFTLES---GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLS  248 (670)
Q Consensus       172 dvns~~s~~~~~~~~~~~~~~~~~~l~~---g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~  248 (670)
                      ||||+.|+++.+           +++.+   |+.++|||+||+.+++|+|+|++.+.           ..|+|++.+||+
T Consensus       149 dvns~~S~~~~~-----------~~l~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~~-----------~~~~ls~~vdL~  206 (243)
T 1gsl_A          149 DVNSIVSVATTR-----------WENDDAYGSSIATAHITYDARSKILTVLLSYEHG-----------RDYILSHVVDLA  206 (243)
T ss_dssp             EESSSSCSEEEE-----------CCHHHHTSCCEEEEEEEEETTTTEEEEEEEETTS-----------CEEEEEEECCHH
T ss_pred             ccCCccccceee-----------eEEeccCCCcEEEEEEEEeCCCCEEEEEEecCCC-----------CceeEEEEechH
Confidence            999999988876           34666   99999999999999999999987542           358999999999


Q ss_pred             ccccccceeeEeecCCceeeeEEEeccccccCC
Q 035655          249 PAFQETMYVGFSASTGRKVSSHFILGWSFSMNG  281 (670)
Q Consensus       249 ~~l~~~~~vGFsastg~~~~~h~i~sW~fs~~~  281 (670)
                      .+|||+|||||||||| ..|.|+|++|+|+++.
T Consensus       207 ~~l~~~~~vGFSAsTG-~~~~h~IlsWsF~s~l  238 (243)
T 1gsl_A          207 KVLPQKVRIGFSAGVG-YDEVTYILSWHFFSTL  238 (243)
T ss_dssp             HHSCSEEEEEEEEEEC-BSEEEEEEEEEEEEEC
T ss_pred             HhCCCceEEEEEeccC-CcceeEEEEEEEEeec
Confidence            9999999999999999 9999999999999864

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=7.1e-58  Score=454.35  Aligned_cols=217  Identities=34%  Similarity=0.563  Sum_probs=196.2

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCC---CCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDN---AHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVF   99 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~---~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f   99 (670)
                      ..++|+|++|+.  .+   |.++|+|.+.++|.|+||++   ..++.|||+|++||+|||+.+|     +++||+|+|+|
T Consensus         2 ~~~~F~f~~F~~--~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~~g-----~vaSFsT~F~F   71 (226)
T 1avb_A            2 NDASFNVETFNK--TN---LILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID-----NLASFSTNFTF   71 (226)
T ss_dssp             EEEEEEESSCCG--GG---EEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGT-----EEEEEEEEEEE
T ss_pred             cceEEEcCCCCc--cC---EEEeccEEECCCCEEEeCCCCCCccCCeEEEEeCCCEEeecCCCC-----CcccEEEEEEE
Confidence            357999999985  66   99999999977899999998   6789999999999999999998     89999999999


Q ss_pred             EEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcccc
Q 035655          100 QIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSI  179 (670)
Q Consensus       100 ~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~  179 (670)
                      +|.+++...+||||||||+|.+..|. +.||||||+|.+ ++++.||+|||||||+          +|||||||||++|.
T Consensus        72 ~I~~~~~~~~gdGlAF~l~p~~~~p~-~~g~~LGl~n~~-~~~~~~~~vAVEFDT~----------~nHVGIdvNs~~S~  139 (226)
T 1avb_A           72 RINAKNIENSAYGLAFALVPVGSRPK-LKGRYLGLFNTT-NYDRDAHTVAVVFDTV----------SNRIEIDVNSIRPI  139 (226)
T ss_dssp             EEEESSTTSCCEEEEEEEEETTCCCC-CCGGGTTTCSCS-SCCGGGCCEEEEEETT----------TTEEEEEESSSSCS
T ss_pred             EEeCCCCCCCCCcEEEEEecCCCCCC-CCCCcccccccC-CCCCcccEEEEEecCc----------CCccceeecCcccC
Confidence            99988777899999999999877666 889999999976 4477899999999997          48999999999999


Q ss_pred             cccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeE
Q 035655          180 KLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF  259 (670)
Q Consensus       180 ~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGF  259 (670)
                      +++++         +..|.+|+.++|||+||+.+++|+|+|++.+.          +.+|+|++.+||+++|||+|||||
T Consensus       140 ~t~~~---------~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~~~VGF  200 (226)
T 1avb_A          140 ATESC---------NFGHNNGEKAEVRITYDSPKNDLRVSLLYPSS----------EEKCHVSATVPLEKEVEDWVSVGF  200 (226)
T ss_dssp             EEEEC---------CSGGGTTCEEEEEEEEEGGGTEEEEEEEETTT----------TEEEEEEEECCHHHHSCSEEEEEE
T ss_pred             ccccC---------CccccCCCeEEEEEEEeCCCcEEEEEEeecCC----------CccceEEEEechHHhCCCceEEEE
Confidence            88772         36777999999999999999999999987654          337899999999999999999999


Q ss_pred             eecCCce---eeeEEEeccccccC
Q 035655          260 SASTGRK---VSSHFILGWSFSMN  280 (670)
Q Consensus       260 sastg~~---~~~h~i~sW~fs~~  280 (670)
                      |||||..   .|.|+|++|+|+++
T Consensus       201 SAsTG~~~~~~~~h~IlsWsF~s~  224 (226)
T 1avb_A          201 SATSGSKKETTETHNVLSWSFSSN  224 (226)
T ss_dssp             EEEECSSGGGCEEEEEEEEEEEEE
T ss_pred             EeccCCCCcccceeEEEEEEEEee
Confidence            9999999   99999999999864

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=4.6e-56  Score=444.82  Aligned_cols=217  Identities=30%  Similarity=0.502  Sum_probs=192.9

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCC------CeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH------NVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      ..++|+|++|..  .+.  |.++|+|.+.++|.|+||++..      ++.|||+|++||+|||+.       +++||+|+
T Consensus         2 ~~~~F~f~~F~~--~~~--l~l~G~A~v~~~g~l~LT~~~~~~~~~~~s~Gra~y~~Pi~l~d~~-------~vaSFsT~   70 (240)
T 1ioa_A            2 TETSFNFPNFHT--DDK--LILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSN-------NVASFNTN   70 (240)
T ss_dssp             CCCEEEESSCCT--TSS--EEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBCSS-------CBEEEEEE
T ss_pred             cceEEEcCCCCC--CCc--EEEccceEECCCCeEEeCCCCCCCccccCceEEEEECCCEEccCCC-------ccccEEEE
Confidence            357999999975  332  9999999997789999998765      799999999999999865       48999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      |+|+|.+++...+||||||||+|.+..|. +.||||||+|.+ ++++.||+|||||||+          +|||||||||+
T Consensus        71 F~F~I~~~~~~~~gdGlAF~l~p~~~~p~-~~g~~LGL~n~~-~~~~~~~~vAVEFDT~----------~nHVGIdvNs~  138 (240)
T 1ioa_A           71 FTFIIRAKNQSISAYGLAFALVPVNSPPQ-KKQEFLGIFNTN-NPEPNARTVAVVFNTF----------KNRIDFDKNFI  138 (240)
T ss_dssp             EEEECCBSCTTSCCEEEEEEEEETTCCCC-CCGGGTTTCCCS-SCCGGGCCEEEEEETT----------TTEEEEEESSS
T ss_pred             EEEEEeCCCCCCCCCcEEEEEecCCCCCC-CCCCcccccccC-CCCCcCcEEEEEecCc----------CCceeeeeCCc
Confidence            99999988777899999999999877666 899999999976 4477899999999997          48999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .|.+++++         +..|.+|+.++|||+||+.+++|+|+|++.+.          |.+|+|+..+||+++|||+||
T Consensus       139 ~S~~t~~~---------~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdL~~~l~e~v~  199 (240)
T 1ioa_A          139 KPYVNENC---------DFHKYNGEKTDVQITYDSSNNDLRVFLHFTVS----------QVKCSVSATVHLEKEVDEWVS  199 (240)
T ss_dssp             SCSEEEEC---------CHHHHCSSCEEEEEEEETTTTEEEEEEEETTT----------CCEEEEEEECCGGGTSCSEEE
T ss_pred             cccccccC---------CccccCCCEEEEEEEEeCCCcEEEEEEecCCC----------CccceeEEEechHHhCCCceE
Confidence            99988762         35677999999999999999999999987654          347899999999999999999


Q ss_pred             eeEeecCCce---eeeEEEeccccccCC
Q 035655          257 VGFSASTGRK---VSSHFILGWSFSMNG  281 (670)
Q Consensus       257 vGFsastg~~---~~~h~i~sW~fs~~~  281 (670)
                      ||||||||..   .|.|+|++|+|+++.
T Consensus       200 VGFSAsTG~~~~~~~~H~IlsWsF~s~~  227 (240)
T 1ioa_A          200 VGFSPTSGLTEDTTETHDVLSWSFSSKF  227 (240)
T ss_dssp             EEEEEEECSSTTTCBCCEEEEEEEEEEE
T ss_pred             EEEEeccCCCCcccceeEEEEEEEEeeC
Confidence            9999999998   999999999999864

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*

Probab=100.00  E-value=1.1e-52  Score=414.71  Aligned_cols=201  Identities=29%  Similarity=0.472  Sum_probs=175.0

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEe
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIV  102 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~  102 (670)
                      ..++|+|++|..  .+   |.++|+|.+.++|.|+||++..++.|||+|++||+|||+.+|     +++||+|+|+|+|.
T Consensus         2 ~~~~F~f~~F~~--~~---l~l~G~A~v~~~g~l~LT~~~~~~~Gra~y~~Pi~l~~~~~g-----~vaSFsT~F~F~I~   71 (223)
T 1dhk_B            2 TETSFIIDAFNK--TN---LILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTG-----NVASFDTNFTMNIR   71 (223)
T ss_dssp             CCCEEEESSCCG--GG---EEEESSEEECTTSCEEESSSCSSEEEEEEESSCEESEETTTT-----EECEEEEEEEEEEE
T ss_pred             cceEEEcCCCCc--CC---EEEeccEEECCCCEEEcCCCCCCCEEEEEECCCEEeecCCCC-----CccceEEEEEEEEe
Confidence            357999999985  66   999999999778999999998899999999999999999998     89999999999999


Q ss_pred             cCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCccccccc
Q 035655          103 TPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLE  182 (670)
Q Consensus       103 ~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~~  182 (670)
                      +++...+||||||||+|.+..|+                   +++|||||||+          +|||||||||+ |++++
T Consensus        72 ~~~~~~~gdGlAF~l~p~~~~p~-------------------~~~vAVEFDT~----------~nHVGIdvNsi-S~~~~  121 (223)
T 1dhk_B           72 THRQANSAVGLDFVLVPVQPESK-------------------GDTVTVEFDTF----------LSRISIDVNNN-DIKSV  121 (223)
T ss_dssp             CCC---CCSEEEEEEEEC-------------------------CCEEEEEETT----------TTEEEEEETTE-EEEEE
T ss_pred             CCCCCCCCCceEEEEecCCCCCC-------------------ccEEEEEecCC----------CCcccccCCcc-ccccc
Confidence            88777899999999999765432                   34899999997          48999999999 98877


Q ss_pred             ccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEeec
Q 035655          183 PAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAS  262 (670)
Q Consensus       183 ~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsas  262 (670)
                      ++         +..|.+|+.++|||+||+.+++|+|+|++.+.          +.+|+|+..+||+++|||+||||||||
T Consensus       122 ~~---------~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~----------~~~~~ls~~vdLs~~l~e~~~VGFSAs  182 (223)
T 1dhk_B          122 PW---------DVHDYDGQNAEVRITYNSSTKVFSVSLSNPST----------GKSNNVSTTVELEKEVYDWVSVGFSAT  182 (223)
T ss_dssp             EC---------CGGGTTTSCEEEEEEEETTTTEEEEEEECTTT----------CCEEEEEEECCCCSGGGSEEEEEEEEE
T ss_pred             cC---------CccccCCCEEEEEEEEeCCCCEEEEEEecCCC----------CccceEEEEechHHhCCCceEEEEEec
Confidence            62         46777999999999999999999999987654          347899999999999999999999999


Q ss_pred             CCce---eeeEEEeccccccCCC
Q 035655          263 TGRK---VSSHFILGWSFSMNGA  282 (670)
Q Consensus       263 tg~~---~~~h~i~sW~fs~~~~  282 (670)
                      ||..   .|.|+|++|+|+++..
T Consensus       183 TG~~~~~~~~H~IlsWsF~s~~~  205 (223)
T 1dhk_B          183 SGAYQWSYETHDVLSWSFSSKFI  205 (223)
T ss_dssp             ECSGGGSCCEEEEEEEEEEEEC-
T ss_pred             cCCCccccceEEEEEEEEEeccc
Confidence            9998   9999999999998753

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=6.8e-51  Score=426.27  Aligned_cols=250  Identities=28%  Similarity=0.449  Sum_probs=195.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .+++...++||+|+||+||+|++..               ..+.|.+|+++|++++|||||+++|+|.+ +.++||||||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~  113 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWC  113 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcC
Confidence            3567788999999999999998644               34679999999999999999999999865 5689999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC-cc
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK-IS  504 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~-~~  504 (670)
                      ++|+|.++|.... ..++|.++++|+.|||+||+|||+   ++||||||||+||||++++.+||+|||+|+...... ..
T Consensus       114 ~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~  189 (307)
T 3omv_A          114 EGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ  189 (307)
T ss_dssp             SSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred             CCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence            9999999997653 369999999999999999999998   899999999999999999999999999998765433 23


Q ss_pred             eeeccccCcCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELART---GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ......||+.|||||++.+   ++|+.++|||||||++|||+||+.||.......  ........+    ...|.+ ...
T Consensus       190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~--~~~~~~~~~----~~~p~~-~~~  262 (307)
T 3omv_A          190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIFMVGRG----YASPDL-SKL  262 (307)
T ss_dssp             ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHHHHHTT----CCCCCS-TTS
T ss_pred             eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH--HHHHHHhcC----CCCCCc-ccc
Confidence            3455689999999999864   468999999999999999999999997633211  111111111    111211 112


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC-CCCCC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD-ELLPI  622 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~-~~~p~  622 (670)
                      +...+..+.+++..||+.||.+|||+.||+++|+.. .++|.
T Consensus       263 ~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          263 YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence            223446688899999999999999999999998754 34444

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.8e-51  Score=431.83  Aligned_cols=241  Identities=29%  Similarity=0.414  Sum_probs=199.7

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      .+++..++||+|+||+||+|.+..                      ..++|.+|+.+|++|+|||||+++|+|.+++.++
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            345668899999999999997521                      2468999999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          420 LVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                      ||||||++|+|.++|..+.              ...++|.++++|+.|||+||+|||+   ++||||||||+||||++++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCC
Confidence            9999999999999996532              2469999999999999999999999   8999999999999999999


Q ss_pred             cEEEEeecCceeccCCC-cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHH
Q 035655          486 NARLGDFGLARLFDHGK-ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEF  563 (670)
Q Consensus       486 ~~kL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~  563 (670)
                      .+||+|||+++...... ....+...||+.|||||++.++.++.++|||||||++|||+| |+.||......  +.. ..
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~-~~  259 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVV-EM  259 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHH-HH
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHH-HH
Confidence            99999999998664432 223345689999999999999999999999999999999998 89999864321  111 11


Q ss_pred             hhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       564 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...+...         +.+...+..+.+++..||+.||.+|||++||+++|+..
T Consensus       260 i~~~~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          260 IRNRQVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHcCCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            1122211         11223345688999999999999999999999999854

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.6e-51  Score=430.44  Aligned_cols=241  Identities=27%  Similarity=0.441  Sum_probs=198.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|...++||+|+||+||+|.+..                     ..++|.+|+++|++|+|||||+++|+|.+++.++|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            467888999999999999997531                     34679999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCC-----------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEE
Q 035655          421 VYDYIPNGSLDSLLFDNE-----------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARL  489 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL  489 (670)
                      |||||++|+|.++|+...           ...++|.++++++.|||+||+|||+   ++|+||||||+||||++++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence            999999999999997542           3469999999999999999999999   89999999999999999999999


Q ss_pred             EeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcC
Q 035655          490 GDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLG  567 (670)
Q Consensus       490 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~  567 (670)
                      +|||+|+........ ......||+.|||||++.++.++.++|||||||++|||+| |+.||......  +.. .....+
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~-~~i~~~  246 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVI-ECITQG  246 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHH-HHHHHT
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHH-HHHHcC
Confidence            999999876543322 2234579999999999999999999999999999999999 99999864322  111 111122


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...     .    .+...+..+.+++..||+.||++|||++||++.|++.
T Consensus       247 ~~~-----~----~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~  287 (299)
T 4asz_A          247 RVL-----Q----RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL  287 (299)
T ss_dssp             CCC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC-----C----CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            211     1    1222345678999999999999999999999998753

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A*

Probab=100.00  E-value=9.7e-50  Score=380.79  Aligned_cols=177  Identities=28%  Similarity=0.528  Sum_probs=159.9

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEe
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIV  102 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~  102 (670)
                      ..++|+|++|.+...+   |.++|+|. .++|.|+||+...+++|||+|++||+|||+.+|     +++||+|+|+|.|.
T Consensus         2 ~~~sF~f~~F~~~~~~---l~l~G~A~-~~~g~l~LT~~~~~~~Gra~y~~Pv~l~d~~tg-----~vaSFsT~F~F~I~   72 (181)
T 2ltn_A            2 ETTSFLITKFSPDQQN---LIFQGDGY-TTKEKLTLTKAVKNTVGRALYSSPIHIWDRETG-----NVANFVTSFTFVIN   72 (181)
T ss_dssp             EEEEEEESSCCSSCTT---EEEEETCE-ECSSSEEEECSCSSCEEEEEESSCEECBCTTTC-----CBCEEEEEEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---EEEecccc-CCCCCeEcCCCCCCCEEEEEECCCEEeecCCCC-----CccceEEEEEEEEe
Confidence            3579999999853356   99999999 568999999998899999999999999999998     89999999999999


Q ss_pred             cCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCC--CCeeEEecCCccccc
Q 035655          103 TPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQ--GNHVGINVNSMKSIK  180 (670)
Q Consensus       103 ~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~--~~Hvgidvns~~s~~  180 (670)
                      +++...+||||||||+|....|. +.||||||+|.++ +++.||+|||||||++| .+ |||+  +|||||||||+.|++
T Consensus        73 ~~~~~~~gdGlAF~l~p~~~~p~-~~g~~LGL~n~~~-~~~~n~~vAVEFDT~~n-~~-~Dp~~~~nHVGIdvNs~~S~~  148 (181)
T 2ltn_A           73 APNSYNVADGFTFFIAPVDTKPQ-TGGGYLGVFNSAE-YDKTTQTVAVEFDTFYN-AA-WDPSNRDRHIGIDVNSIKSVN  148 (181)
T ss_dssp             CSSTTSCCCEEEEEEEETTCCCC-CCGGGTTTCSCSS-CCTTSCCEEEEEECSCC-TT-TSCTTCCCEEEEEESSSSCSE
T ss_pred             cCCCCCCCCceEEEEecCCCCCC-CCCccccccccCC-CCccccEEEEEeccccc-cc-cCCCCCCCEEEEEcCCccccc
Confidence            88777899999999999877666 8999999999874 57889999999999999 67 8999  999999999999998


Q ss_pred             ccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeec
Q 035655          181 LEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPM  223 (670)
Q Consensus       181 ~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~  223 (670)
                      +++           ++|.+|+.|+|||+||+.+++|+|+|++.
T Consensus       149 t~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~  180 (181)
T 2ltn_A          149 TKS-----------WKLQNGEEANVVIAFNAATNVLTVSLTYP  180 (181)
T ss_dssp             EEE-----------CCCCTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred             eec-----------cccCCCCEEEEEEEEECCCCEEEEEEecC
Confidence            876           45789999999999999999999999763

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.4e-51  Score=432.17  Aligned_cols=240  Identities=26%  Similarity=0.418  Sum_probs=192.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|...++||+|+||+||+|++..                     ..++|.+|+++|++|+|||||+++|+|.+.+.++|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            457778999999999999997531                     34679999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCC-------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcE
Q 035655          421 VYDYIPNGSLDSLLFDNE-------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA  487 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~  487 (670)
                      |||||++|+|.++|++..             ..+++|.++++|+.|||+||+|||+   ++|+||||||+||||++++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcE
Confidence            999999999999997642             2469999999999999999999998   899999999999999999999


Q ss_pred             EEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHh
Q 035655          488 RLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQ  564 (670)
Q Consensus       488 kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~  564 (670)
                      ||+|||+++....... ...+...||+.|||||++.+..++.++|||||||++|||+| |+.||...... ....    .
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~----i  273 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC----I  273 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH----H
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH----H
Confidence            9999999987654332 23345689999999999999999999999999999999999 99999764321 1111    1


Q ss_pred             hcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       565 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ..+.     .+..    +......+.+++.+||+.||++|||++||+++|+..
T Consensus       274 ~~g~-----~~~~----p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l  317 (329)
T 4aoj_A          274 TQGR-----ELER----PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL  317 (329)
T ss_dssp             HHTC-----CCCC----CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred             HcCC-----CCCC----cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            1111     1111    222335678899999999999999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4.4e-49  Score=418.63  Aligned_cols=236  Identities=22%  Similarity=0.390  Sum_probs=193.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|+..++||+|+||+||+|+...                  ..+.|.+|+++|++|+|||||++++++.+++.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            689999999999999999997643                  24578899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      ||++|+|.++|.......+++.+++.++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+|+...... 
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-  179 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-  179 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence            9999999999987666678999999999999999999999   999999999999999999999999999998664321 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      ...+..+||+.|||||++.+..|+.++|||||||++|||+||+.||......  +..... ..+..     +.+...   
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~i-~~~~~-----~~~~~~---  248 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK--NLVLKI-ISGSF-----PPVSLH---  248 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHH-HHTCC-----CCCCTT---
T ss_pred             ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHH-HcCCC-----CCCCcc---
Confidence            2234568999999999999999999999999999999999999999864422  111111 11111     112112   


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                       ....+.+++.+||+.||.+|||++|+++|
T Consensus       249 -~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          249 -YSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             -SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             23567889999999999999999999986

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4e-49  Score=421.36  Aligned_cols=244  Identities=24%  Similarity=0.344  Sum_probs=199.2

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcccc-Cceeeeeeeeecc
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRH-KHLVNLQGWCKRK  415 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H-~nIv~l~g~~~~~  415 (670)
                      ...++|+..++||+|+||+||+|.+..                      ..++|.+|+++|++++| ||||+++|+|.+.
T Consensus        61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~  140 (353)
T 4ase_A           61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP  140 (353)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence            345789999999999999999996421                      24679999999999976 8999999999764


Q ss_pred             -CeeEEEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEE
Q 035655          416 -RDLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVL  480 (670)
Q Consensus       416 -~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NIL  480 (670)
                       +.+++|||||++|+|.++|++..              +..++|.+++.++.|||+||+|||+   ++||||||||+|||
T Consensus       141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NIL  217 (353)
T 4ase_A          141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNIL  217 (353)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCcccee
Confidence             57899999999999999997542              2358999999999999999999999   89999999999999


Q ss_pred             ecCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHH
Q 035655          481 IDADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVD  558 (670)
Q Consensus       481 ld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~  558 (670)
                      |++++.+||+|||+|+....... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||......  +
T Consensus       218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~--~  295 (353)
T 4ase_A          218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--E  295 (353)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--H
T ss_pred             eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH--H
Confidence            99999999999999987655432 33445689999999999999999999999999999999998 99999763321  1


Q ss_pred             HHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          559 WVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       559 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+......+..     +..    +......+.+++..||+.||.+|||+.||+++|+.
T Consensus       296 ~~~~~i~~g~~-----~~~----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          296 EFCRRLKEGTR-----MRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             HHHHHHHHTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHcCCC-----CCC----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            11111111211     111    11223567889999999999999999999999863

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.3e-48  Score=404.10  Aligned_cols=231  Identities=29%  Similarity=0.445  Sum_probs=185.8

Q ss_pred             ccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec----cCeeEEE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR----KRDLLLV  421 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~----~~~~~lV  421 (670)
                      |+..++||+|+||+||+|.+..                  ..+.|.+|+++|++|+|||||+++++|..    ++.++||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            3566789999999999998643                  23568999999999999999999999865    3568999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce--EEecccCCCcEEecC-CCcEEEEeecCceec
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV--VIHRDVKSGNVLIDA-DMNARLGDFGLARLF  498 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDIkp~NILld~-~~~~kL~DFGla~~~  498 (670)
                      ||||++|+|.++|.+.  ..+++..+..++.||+.||+|||+   ++  |+||||||+||||+. ++.+||+|||+|+..
T Consensus       108 mEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence            9999999999999754  469999999999999999999998   66  999999999999984 799999999999854


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ..   ......+||+.|||||++.+ +|+.++|||||||++|||+||+.||....... .. ......+.     .|   
T Consensus       183 ~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~-~~~i~~~~-----~~---  248 (290)
T 3fpq_A          183 RA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QI-YRRVTSGV-----KP---  248 (290)
T ss_dssp             CT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HH-HHHHTTTC-----CC---
T ss_pred             CC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HH-HHHHHcCC-----CC---
Confidence            33   23445689999999998864 69999999999999999999999997532211 11 11111111     01   


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..++......+.+++..||+.||.+|||++|+++|
T Consensus       249 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          249 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            11122223457889999999999999999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=4.4e-48  Score=410.28  Aligned_cols=236  Identities=21%  Similarity=0.302  Sum_probs=198.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      +.|+..++||+|+||+||+|+...                ..+.+.+|+++|++++|||||++++++.+++.+|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            568889999999999999998753                2456889999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++|+|.+++.+   ..+++.++..++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+|+...... ..
T Consensus       154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~  226 (346)
T 4fih_A          154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PR  226 (346)
T ss_dssp             TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CC
T ss_pred             CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-Cc
Confidence            99999999964   359999999999999999999999   999999999999999999999999999999775533 23


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .+..+||+.|||||++.+..|+.++|||||||++|||++|+.||........  .....      ....+.+.  .....
T Consensus       227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--~~~i~------~~~~~~~~--~~~~~  296 (346)
T 4fih_A          227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMIR------DNLPPRLK--NLHKV  296 (346)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHH------HSSCCCCS--CGGGS
T ss_pred             ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHHHH------cCCCCCCC--ccccC
Confidence            4567899999999999999999999999999999999999999986432211  11111      11122221  12233


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...+.+++.+||+.||++|||++|+++|-
T Consensus       297 s~~~~dli~~~L~~dP~~R~ta~e~l~Hp  325 (346)
T 4fih_A          297 SPSLKGFLDRLLVRDPAQRATAAELLKHP  325 (346)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence            45678899999999999999999999863

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=3.7e-48  Score=406.64  Aligned_cols=248  Identities=26%  Similarity=0.361  Sum_probs=190.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------hHHHHH--HHHHHHhccccCceeeeeeeeeccC----eeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------RMREFA--AEIESLGRLRHKHLVNLQGWCKRKR----DLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------~~~~f~--~Ei~~L~~l~H~nIv~l~g~~~~~~----~~~lV~E~  424 (670)
                      ++|...++||+|+||+||+|++.+           ..+++.  .|+..+.+++|||||+++|+|.+++    .++|||||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            457788999999999999998754           223343  5666677899999999999998654    58999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccc-----cceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW-----EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      |++|+|.++|+..   .++|+.+.+++.|+++||+|||+.+     +++|+||||||+||||+.++++||+|||+|+...
T Consensus        83 ~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  159 (303)
T 3hmm_A           83 HEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             CTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             CCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence            9999999999653   5899999999999999999999832     3499999999999999999999999999998776


Q ss_pred             CCCcc---eeeccccCcCCCCccccccC------CCCccchhHHHHHHHHHHHhCCCCCCCCcch------------hHH
Q 035655          500 HGKIS---HTTNVVGTIGYIAPELARTG------KASCSTDVFAYGVLLLEIATGRRPIDSDHFI------------LVD  558 (670)
Q Consensus       500 ~~~~~---~~~~~~gt~~y~aPE~~~~~------~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~------------~~~  558 (670)
                      .....   .....+||+.|||||++.+.      .++.++|||||||++|||+||+.|+......            ...
T Consensus       160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~  239 (303)
T 3hmm_A          160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE  239 (303)
T ss_dssp             TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred             CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence            54322   22345899999999998754      4678999999999999999998876431110            001


Q ss_pred             HHHHHhhcCCcccccCCCCCCcc-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          559 WVLEFQHLGQVLDVVDPNLGSSY-VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       559 ~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......    .....+|.+.... ..+..+.+.+++.+||+.||.+|||+.||++.|+.
T Consensus       240 ~~~~~~----~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          240 EMRKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             HHHHHH----TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHH----hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            111111    1112334443322 23556788999999999999999999999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.4e-48  Score=409.86  Aligned_cols=240  Identities=20%  Similarity=0.223  Sum_probs=194.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccchH-----------HHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTRM-----------REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS  429 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~~-----------~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gs  429 (670)
                      .+.|...++||+|+||.||+|++....           ....+|+.+|++|+|||||++++++.+++.+|||||||++|+
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~  136 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS  136 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence            356888899999999999999876421           223589999999999999999999999999999999999999


Q ss_pred             chhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceeccCCCcc----
Q 035655          430 LDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFDHGKIS----  504 (670)
Q Consensus       430 L~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~~~~~----  504 (670)
                      |.++|.+.  ..+++.++..++.||+.||+|||+   ++|+||||||+||||+.++ .+||+|||+|+........    
T Consensus       137 L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~  211 (336)
T 4g3f_A          137 LGQLIKQM--GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL  211 (336)
T ss_dssp             HHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred             HHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence            99999754  369999999999999999999999   8999999999999999998 6999999999987654322    


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      .....+||+.|||||++.+..|+.++|||||||++|||++|+.||...... +...+.   .......        +.+.
T Consensus       212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~---~~~~~~~--------~~~~  280 (336)
T 4g3f_A          212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA---SEPPPIR--------EIPP  280 (336)
T ss_dssp             --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH---HSCCGGG--------GSCT
T ss_pred             cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH---cCCCCch--------hcCc
Confidence            123458999999999999999999999999999999999999999763321 111111   1111011        1122


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .....+.+++.+||++||.+|||+.|++++|..
T Consensus       281 ~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          281 SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            234567889999999999999999999998863

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=7.6e-48  Score=402.62  Aligned_cols=233  Identities=23%  Similarity=0.303  Sum_probs=195.9

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||+||+++...                   ..+.+.+|+++|++|+|||||++++++++++.+|+||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            469999999999999999998643                   2356889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.++|.+.  ..+++.++..++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+|+......
T Consensus       112 Ey~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~  186 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  186 (311)
T ss_dssp             CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred             ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence            999999999999754  369999999999999999999999   999999999999999999999999999999875433


Q ss_pred             -cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 -ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 -~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       .......+||+.|||||++.+..|+.++||||+||++|||++|+.||........  . ......+      ..+... 
T Consensus       187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--~-~~i~~~~------~~~p~~-  256 (311)
T 4aw0_A          187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI--F-AKIIKLE------YDFPEK-  256 (311)
T ss_dssp             TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--H-HHHHHTC------CCCCTT-
T ss_pred             CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--H-HHHHcCC------CCCCcc-
Confidence             2344567999999999999999999999999999999999999999986442211  1 1111111      111112 


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLR  612 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  612 (670)
                         ....+.+++.+||+.||.+|||++|+++
T Consensus       257 ---~s~~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          257 ---FFPKARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             ---CCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             ---cCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence               2345778999999999999999998754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=7.2e-47  Score=410.66  Aligned_cols=237  Identities=21%  Similarity=0.303  Sum_probs=198.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .+.|+..++||+|+||.||+|+...                ..+.+.+|+.+|++|+|||||++++++.+.+.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            4569999999999999999998643                345688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      |++|+|.+++...   .+++.++..++.||+.||+|||+   ++||||||||+||||+.++.+||+|||+|+...... .
T Consensus       230 ~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~  302 (423)
T 4fie_A          230 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-P  302 (423)
T ss_dssp             CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-C
T ss_pred             CCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCC-c
Confidence            9999999998543   59999999999999999999999   999999999999999999999999999998775533 2


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      .....+||+.|||||++.+..|+.++|||||||++|||++|+.||........  .... .     ....+.+.  ....
T Consensus       303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--~~~i-~-----~~~~~~~~--~~~~  372 (423)
T 4fie_A          303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--MKMI-R-----DNLPPRLK--NLHK  372 (423)
T ss_dssp             CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHH-H-----HSCCCCCS--CTTS
T ss_pred             cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHHH-H-----cCCCCCCc--cccc
Confidence            34567899999999999999999999999999999999999999976432211  1111 1     11111111  1112


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ....+.+++.+||+.||.+|||++|+++|-
T Consensus       373 ~s~~~~dli~~~L~~dP~~R~ta~ell~Hp  402 (423)
T 4fie_A          373 VSPSLKGFLDRLLVRDPAQRATAAELLKHP  402 (423)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence            235678899999999999999999999863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=7.6e-47  Score=389.48  Aligned_cols=233  Identities=23%  Similarity=0.346  Sum_probs=181.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||+||+|+...                   ..+.+.+|+++|++++|||||++++++.+.+.+|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            579999999999999999997643                   2356889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+ +|+|.+++.++  ..+++.++..++.||+.||+|||+   ++|+||||||+|||+++++++||+|||+|+......
T Consensus        93 Ey~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~  166 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             ECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred             eCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence            999 68999999765  359999999999999999999999   999999999999999999999999999998765432


Q ss_pred             cceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                        .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||......  ...... ..+.      +.+..  
T Consensus       167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--~~~~~i-~~~~------~~~p~--  233 (275)
T 3hyh_A          167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNI-SNGV------YTLPK--  233 (275)
T ss_dssp             ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH-HHTC------CCCCT--
T ss_pred             --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHHHH-HcCC------CCCCC--
Confidence              2345689999999999998876 57999999999999999999999864322  111111 1111      11111  


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                        .....+.+++.+||+.||.+|||++|+++|-+
T Consensus       234 --~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw  265 (275)
T 3hyh_A          234 --FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW  265 (275)
T ss_dssp             --TSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred             --CCCHHHHHHHHHHccCChhHCcCHHHHHcCcc
Confidence              12355778999999999999999999999643

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.8e-47  Score=397.07  Aligned_cols=233  Identities=23%  Similarity=0.311  Sum_probs=186.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|+..+.||+|+||+||+++...                     ....+.+|+++|++++|||||++++++.+++.+|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            579999999999999999986421                     22468899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      |||||++|+|.++|.+.  ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+....
T Consensus       104 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             EECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred             EEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence            99999999999999754  369999999999999999999999   9999999999999999999999999999986543


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||........  .... ....      +..   
T Consensus       179 ~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~--~~~i-~~~~------~~~---  245 (304)
T 3ubd_A          179 HE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTMI-LKAK------LGM---  245 (304)
T ss_dssp             ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH-HHCC------CCC---
T ss_pred             CC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH--HHHH-HcCC------CCC---
Confidence            32 233456899999999999999999999999999999999999999986442211  1111 1111      111   


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPT-----MRQVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  613 (670)
                       +......+.+++.+||+.||.+|||     ++|+++|
T Consensus       246 -p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          246 -PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             -CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             -CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence             1122356788999999999999998     5788765

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.2e-45  Score=386.39  Aligned_cols=235  Identities=20%  Similarity=0.325  Sum_probs=178.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccC--------
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR--------  416 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~--------  416 (670)
                      ++|+..+.||+|+||+||+|+...                 ..+.+.+|+++|++|+|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            458899999999999999997643                 2356889999999999999999999987544        


Q ss_pred             ----eeEEEEeccCCCCchhhcccCCc-cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEe
Q 035655          417 ----DLLLVYDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD  491 (670)
Q Consensus       417 ----~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~D  491 (670)
                          .+|+|||||++|+|.+++..... ...++..++.++.||++||+|||+   ++|+||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEcc
Confidence                37999999999999999976543 245677789999999999999999   8999999999999999999999999


Q ss_pred             ecCceeccCCCcc-----------eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHH
Q 035655          492 FGLARLFDHGKIS-----------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWV  560 (670)
Q Consensus       492 FGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~  560 (670)
                      ||+|+........           ..+..+||+.|||||++.+..|+.++|||||||++|||++   ||........ ..
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~-~~  237 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR-TL  237 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH-HH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH-HH
Confidence            9999877553321           1234589999999999999999999999999999999996   7764211111 11


Q ss_pred             HHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       561 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .. ..        .... ..........+.+++.+||++||.+|||+.|+++|
T Consensus       238 ~~-~~--------~~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          238 TD-VR--------NLKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             HH-HH--------TTCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HH-Hh--------cCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            11 11        1111 11222333456789999999999999999999985

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=3.5e-44  Score=379.22  Aligned_cols=276  Identities=42%  Similarity=0.715  Sum_probs=241.3

Q ss_pred             cCCCccchhhHHHhhcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeee
Q 035655          347 DCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQG  410 (670)
Q Consensus       347 ~~~~~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g  410 (670)
                      .....+++.++..++++|+..+.||+|+||.||+|....                ....+.+|++++++++||||+++++
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            346789999999999999999999999999999997643                1236889999999999999999999


Q ss_pred             eeeccCeeEEEEeccCCCCchhhcccCC--ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEE
Q 035655          411 WCKRKRDLLLVYDYIPNGSLDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNAR  488 (670)
Q Consensus       411 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~k  488 (670)
                      +|...+..++||||+++|+|.+++....  ...++|..+..++.|++.||.|||+.+..+|+||||||+|||++.++.+|
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k  174 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV  174 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence            9999999999999999999999997653  33599999999999999999999993333999999999999999999999


Q ss_pred             EEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCC------CcchhHHHHHH
Q 035655          489 LGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS------DHFILVDWVLE  562 (670)
Q Consensus       489 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~------~~~~~~~~~~~  562 (670)
                      |+|||+++..............||+.|+|||++.+..++.++|||||||+++||++|+.||+.      ......+|...
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (326)
T 3uim_A          175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG  254 (326)
T ss_dssp             ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred             eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence            999999998766555555566799999999999988999999999999999999999999962      33445666666


Q ss_pred             HhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCCCCC
Q 035655          563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPI  622 (670)
Q Consensus       563 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p~  622 (670)
                      ...........+..+...+.......+.+++.+||+.||.+|||++|++++|++......
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~  314 (326)
T 3uim_A          255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAER  314 (326)
T ss_dssp             TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSS
T ss_pred             HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhh
Confidence            666677777788888888889999999999999999999999999999999998655443

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=3.8e-43  Score=377.04  Aligned_cols=185  Identities=25%  Similarity=0.411  Sum_probs=160.6

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ..+.|++.++||+|+||+||+|+.+.                 ....+.+|+++|+++ +||||+++++++.+.+.+++|
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv   98 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA   98 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence            45789999999999999999996521                 235688999999998 699999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-CcEEEEeecCceeccC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDH  500 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-~~~kL~DFGla~~~~~  500 (670)
                      |||+++|+|.+++.     .+++.++..++.||+.||+|||+   ++|+||||||+|||++.+ +.+||+|||+|+....
T Consensus        99 mE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A           99 MPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             EECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             EeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            99999999999982     48999999999999999999999   999999999999999877 7999999999986543


Q ss_pred             CCc---------------------------ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCC
Q 035655          501 GKI---------------------------SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSD  552 (670)
Q Consensus       501 ~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~  552 (670)
                      ...                           ...+..+||+.|||||++.+. .++.++||||+||+++||++|+.||...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            221                           112345799999999998775 5899999999999999999999999653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=6.8e-43  Score=368.93  Aligned_cols=265  Identities=38%  Similarity=0.662  Sum_probs=227.4

Q ss_pred             CccchhhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeec
Q 035655          350 HRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR  414 (670)
Q Consensus       350 ~~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~  414 (670)
                      .++.+.++..++++|+..+.||+|+||.||+|....               ..+.+.+|++++++++||||++++++|.+
T Consensus        27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  106 (321)
T 2qkw_B           27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE  106 (321)
T ss_dssp             ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred             eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            345566677788999999999999999999998643               34678999999999999999999999999


Q ss_pred             cCeeEEEEeccCCCCchhhcccCC--ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                      .+..++||||+++|+|.+++....  ...++|.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df  183 (321)
T 2qkw_B          107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF  183 (321)
T ss_dssp             TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCC
T ss_pred             CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeec
Confidence            999999999999999999997643  2359999999999999999999999   89999999999999999999999999


Q ss_pred             cCceeccCCC-cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC----cchhHHHHHHHhhcC
Q 035655          493 GLARLFDHGK-ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD----HFILVDWVLEFQHLG  567 (670)
Q Consensus       493 Gla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~----~~~~~~~~~~~~~~~  567 (670)
                      |+++...... ........||+.|+|||++.+..++.++|||||||+++||++|+.||...    ......|.......+
T Consensus       184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~  263 (321)
T 2qkw_B          184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG  263 (321)
T ss_dssp             TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred             ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence            9998654322 22233456899999999999899999999999999999999999999752    223455655556666


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .+...+++.+...........+.+++..||+.||.+||+++|++++|+..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  313 (321)
T 2qkw_B          264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA  313 (321)
T ss_dssp             CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            77777888887778888899999999999999999999999999999754

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.6e-43  Score=379.97  Aligned_cols=249  Identities=20%  Similarity=0.320  Sum_probs=191.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec------cC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR------KR  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~------~~  416 (670)
                      .++|+..+.||+|+||+||+|+...                  ..+.+.+|+++|++|+|||||++++++..      .+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            3579999999999999999998643                  23567899999999999999999998764      36


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      .+|||||||+ |+|.+++.+.  ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~  206 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMAR  206 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceee
Confidence            7899999995 7899999654  469999999999999999999999   999999999999999999999999999998


Q ss_pred             eccCCC---cceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCc--
Q 035655          497 LFDHGK---ISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQV--  569 (670)
Q Consensus       497 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~--  569 (670)
                      ......   .......+||+.|||||++.+. .++.++||||+||+++||++|+.||...... ....+.........  
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~  286 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV  286 (398)
T ss_dssp             CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred             ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence            764322   2233457899999999998775 5689999999999999999999999864321 11111111100000  


Q ss_pred             ------------ccccCCCCCCcc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          570 ------------LDVVDPNLGSSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       570 ------------~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                                  .....+.....+   .......+.+|+.+||+.||.+|||++|+++|-+
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  347 (398)
T 4b99_A          287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF  347 (398)
T ss_dssp             TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred             hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHh
Confidence                        000011100000   0112356788999999999999999999999754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=3.5e-42  Score=391.14  Aligned_cols=240  Identities=23%  Similarity=0.328  Sum_probs=198.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|++.+.||+|+||.||+|+...                ..+.+.+|+++|++|+|||||++++++.+.+.+++||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            4689999999999999999998643                245688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC--CcEEEEeecCceeccCCC
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD--MNARLGDFGLARLFDHGK  502 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~--~~~kL~DFGla~~~~~~~  502 (670)
                      |++|+|.++|.+.. ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.+  +.+||+|||+|+......
T Consensus       236 ~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~  311 (573)
T 3uto_A          236 MSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  311 (573)
T ss_dssp             CCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred             cCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence            99999999996543 369999999999999999999999   999999999999999854  899999999999876543


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                        .....+||+.|||||++.+..|+.++||||+||++|||++|+.||........  ..... ..      +..+.....
T Consensus       312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~--~~~i~-~~------~~~~~~~~~  380 (573)
T 3uto_A          312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET--LRNVK-SC------DWNMDDSAF  380 (573)
T ss_dssp             --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHHHH-TT------CCCCCSGGG
T ss_pred             --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--HHHHH-hC------CCCCCcccc
Confidence              33456899999999999999999999999999999999999999986432211  11111 11      111111222


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ......+.+|+..||+.||.+||++.|+++|=+
T Consensus       381 ~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw  413 (573)
T 3uto_A          381 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPW  413 (573)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence            223456788999999999999999999999744

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=8.4e-42  Score=387.21  Aligned_cols=235  Identities=23%  Similarity=0.266  Sum_probs=189.6

Q ss_pred             cCccccceEeeeCceeEEEeeccch-------------------HHHHH---HHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR-------------------MREFA---AEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~-------------------~~~f~---~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      ++|++.++||+|+||+||+++....                   ...+.   .++.+++.++|||||++++++.+.+.+|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            5799999999999999999986541                   12233   3466777889999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||||++||+|.++|.+.  ..+++..+..++.||+.||.|||+   ++||||||||+||||+.+|.+||+|||+|+...
T Consensus       269 lVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~  343 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS  343 (689)
T ss_dssp             EEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             EEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence            999999999999999764  359999999999999999999999   999999999999999999999999999998775


Q ss_pred             CCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ...   ....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||..................      ...+ 
T Consensus       344 ~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~------~~~~-  413 (689)
T 3v5w_A          344 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM------AVEL-  413 (689)
T ss_dssp             SCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC------CCCC-
T ss_pred             CCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC------CCCC-
Confidence            532   345689999999999965 57999999999999999999999999753221111111111111      1111 


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHh
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPT-----MRQVLRYL  614 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  614 (670)
                         +......+.+++..||+.||.+|++     ++||++|-
T Consensus       414 ---p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp  451 (689)
T 3v5w_A          414 ---PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP  451 (689)
T ss_dssp             ---CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred             ---CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence               1122356788999999999999998     78888764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=2.4e-40  Score=346.62  Aligned_cols=264  Identities=35%  Similarity=0.608  Sum_probs=218.5

Q ss_pred             CCccchhhHHHhhcCcccc------ceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCc
Q 035655          349 PHRFRYSDLYTATKGFKQS------EVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKH  404 (670)
Q Consensus       349 ~~~~~~~~l~~~t~~f~~~------~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~n  404 (670)
                      .+.|++.++..++++|...      ++||+|+||.||+|....                  ..+.+.+|+.++++++|||
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   91 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN   91 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence            5689999999999999888      899999999999997533                  2467889999999999999


Q ss_pred             eeeeeeeeeccCeeEEEEeccCCCCchhhcccCC-ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC
Q 035655          405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA  483 (670)
Q Consensus       405 Iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~  483 (670)
                      |+++++++.+.+..++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+   .+++||||||+||+++.
T Consensus        92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~  168 (307)
T 2nru_A           92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDE  168 (307)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECT
T ss_pred             eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcC
Confidence            9999999999999999999999999999996532 3469999999999999999999998   89999999999999999


Q ss_pred             CCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc--hhHHHH
Q 035655          484 DMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF--ILVDWV  560 (670)
Q Consensus       484 ~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~--~~~~~~  560 (670)
                      ++.+||+|||+++........ ......||+.|+|||.+.+ .++.++|||||||+++||++|+.||.....  ....+.
T Consensus       169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  247 (307)
T 2nru_A          169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK  247 (307)
T ss_dssp             TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred             CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence            999999999999876543322 2334579999999998764 588999999999999999999999976322  222222


Q ss_pred             HHHhhc-CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          561 LEFQHL-GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       561 ~~~~~~-~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...... ..+.+.+++.+ ...+....+.+.+++..||+.||.+||++++++++|+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            222222 22333444444 345667788899999999999999999999999999753

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=4.1e-40  Score=344.32  Aligned_cols=238  Identities=23%  Similarity=0.367  Sum_probs=197.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|+..+.||+|+||.||+|....                ..+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            4679999999999999999997532                346688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++|+|.+++.+.   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++........ 
T Consensus        99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-  171 (297)
T 3fxz_A           99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-  171 (297)
T ss_dssp             CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred             CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence            9999999999653   58999999999999999999999   8999999999999999999999999999987655432 


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........  ......      +.+  ..+..
T Consensus       172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~~~------~~~--~~~~~  241 (297)
T 3fxz_A          172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL--IATNGT------PEL--QNPEK  241 (297)
T ss_dssp             CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH--HHHHCS------CCC--SCGGG
T ss_pred             ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHhCCC------CCC--CCccc
Confidence            23446799999999999999999999999999999999999999976443211111  111111      111  11223


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ....+.+++..||+.||.+||+++|++++-.
T Consensus       242 ~~~~~~~li~~~l~~dp~~Rps~~ell~h~~  272 (297)
T 3fxz_A          242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQF  272 (297)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence            3456788999999999999999999998644

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=8.5e-41  Score=350.93  Aligned_cols=243  Identities=27%  Similarity=0.424  Sum_probs=195.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|...++||+|+||.||++....                ..+.|.+|++++++++||||++++++|.+++..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            4578889999999999999997643                346788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++|+|.+++.... ..+++.+++.++.|+++||+|||+   .+|+||||||+|||++.++.+||+|||+++........
T Consensus        89 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  164 (310)
T 3s95_A           89 IKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ  164 (310)
T ss_dssp             CTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred             cCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence            99999999997643 469999999999999999999999   89999999999999999999999999999876543321


Q ss_pred             e-------------eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc
Q 035655          505 H-------------TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD  571 (670)
Q Consensus       505 ~-------------~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~  571 (670)
                      .             .....||+.|+|||++.+..++.++|||||||+++||++|..|+...........      .....
T Consensus       165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~------~~~~~  238 (310)
T 3s95_A          165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG------LNVRG  238 (310)
T ss_dssp             ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS------BCHHH
T ss_pred             ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh------hhhhc
Confidence            1             1145799999999999999999999999999999999999999865221100000      00000


Q ss_pred             ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          572 VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       572 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ..++...    ......+.+++..||+.||.+||+++++++.|+..
T Consensus       239 ~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l  280 (310)
T 3s95_A          239 FLDRYCP----PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL  280 (310)
T ss_dssp             HHHHTCC----TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccccCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            0000001    11123577899999999999999999999999754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.7e-40  Score=358.38  Aligned_cols=241  Identities=25%  Similarity=0.391  Sum_probs=197.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK  415 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~  415 (670)
                      .++|...+.||+|+||.||+|....                        ..+.+.+|+.+++++ +||||++++++|.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            4678899999999999999996420                        235788999999999 899999999999999


Q ss_pred             CeeEEEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                      +.+++||||+++|+|.+++....              ...+++.+++.++.||+.||.|||+   ++|+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEE
Confidence            99999999999999999997643              2358999999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHH
Q 035655          482 DADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW  559 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~  559 (670)
                      +.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||........  
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~--  314 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL--  314 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH--
Confidence            9999999999999987654332 22334467889999999999999999999999999999999 9999976432211  


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ... ...+.     .+    ..+......+.+++..||+.||.+||++.|+++.|+.
T Consensus       315 ~~~-~~~~~-----~~----~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~  361 (370)
T 2psq_A          315 FKL-LKEGH-----RM----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  361 (370)
T ss_dssp             HHH-HHTTC-----CC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHH-HhcCC-----CC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            111 11111     11    1122233567889999999999999999999999974

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=2.1e-40  Score=348.73  Aligned_cols=245  Identities=27%  Similarity=0.406  Sum_probs=191.3

Q ss_pred             HHhhcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          358 YTATKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       358 ~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ....++|++.+.||+|+||.||+|....                ..++|.+|++++++++||||+++++++.+.+..++|
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            3445689999999999999999997533                235788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCC-ccccCHHHHHHHHHHHHHHhhhccccccce--EEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          422 YDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQV--VIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      |||+++|+|.+++.... ...+++..++.++.|++.||+|||+   .+  |+||||||+|||++.++.+||+|||+++..
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~  189 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK  189 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence            99999999999997653 2349999999999999999999998   78  999999999999999999999999999855


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  .........     ...  
T Consensus       190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~~~~~~~~-----~~~--  259 (309)
T 3p86_A          190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VAAVGFKCK-----RLE--  259 (309)
T ss_dssp             -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHHSCC-----CCC--
T ss_pred             cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhcCC-----CCC--
Confidence            4322 223445799999999999999999999999999999999999999986432211  111111111     011  


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                        .+......+.+++.+||+.||.+||+++++++.|+..
T Consensus       260 --~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~  296 (309)
T 3p86_A          260 --IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL  296 (309)
T ss_dssp             --CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              1122235678899999999999999999999998754

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.1e-39  Score=340.58  Aligned_cols=244  Identities=23%  Similarity=0.422  Sum_probs=193.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||++....                   ..+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            4579999999999999999997532                   235788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++++|.+++...  ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        90 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  164 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET  164 (294)
T ss_dssp             EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred             EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence            9999999999999654  369999999999999999999998   89999999999999999999999999999876554


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      .........||+.|+|||.+.+..++.++|||||||++|||++|+.||.........  .... ....     +......
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--~~~~-~~~~-----~~~~~~~  236 (294)
T 4eqm_A          165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA--IKHI-QDSV-----PNVTTDV  236 (294)
T ss_dssp             ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH--HHHH-SSCC-----CCHHHHS
T ss_pred             cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHh-hccC-----CCcchhc
Confidence            434445567999999999999999999999999999999999999999864322111  1111 1111     0000111


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhcCC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARP-TMRQVLRYLNGD  617 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~  617 (670)
                      .......+.+++.+|++.||.+|| +++++.+.|+..
T Consensus       237 ~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~  273 (294)
T 4eqm_A          237 RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV  273 (294)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred             ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence            122335678899999999999998 899999999865

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=352.20  Aligned_cols=241  Identities=29%  Similarity=0.475  Sum_probs=195.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+|.+..                    ..+.|.+|+.++++++||||++++++|.+.+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            3568889999999999999998631                    24578899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       128 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED  203 (325)
T ss_dssp             EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred             EeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence            999999999999996543 369999999999999999999999   8999999999999999999999999999987755


Q ss_pred             CCcc--eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          501 GKIS--HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       501 ~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ....  ......+|+.|+|||++.+..++.++|||||||+++||++ |+.||........  ..... .+.     ..  
T Consensus       204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~~~-~~~-----~~--  273 (325)
T 3kul_A          204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV--ISSVE-EGY-----RL--  273 (325)
T ss_dssp             ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--HHHHH-TTC-----CC--
T ss_pred             CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH--HHHHH-cCC-----CC--
Confidence            3322  2223456788999999998999999999999999999999 9999976332211  11111 110     11  


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                        ..+......+.+++..||+.||.+||+++|+++.|+..
T Consensus       274 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          274 --PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              11222335688899999999999999999999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3.2e-40  Score=363.35  Aligned_cols=252  Identities=23%  Similarity=0.281  Sum_probs=203.8

Q ss_pred             ccchhhHHHhhcCccccceEeeeCceeEEEeeccch-------------------HHHHHHHHHHHhccccCceeeeeee
Q 035655          351 RFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRLRHKHLVNLQGW  411 (670)
Q Consensus       351 ~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~l~H~nIv~l~g~  411 (670)
                      .+.+.++...+++|+..++||+|+||+||+++....                   ...+.+|+.++.+++||||++++++
T Consensus        63 ~~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~  142 (437)
T 4aw2_A           63 TSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYA  142 (437)
T ss_dssp             HHHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred             cchhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            455667777889999999999999999999987541                   1237899999999999999999999


Q ss_pred             eeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEe
Q 035655          412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD  491 (670)
Q Consensus       412 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~D  491 (670)
                      |.+.+.+++||||+++|+|.+++.+.. ..+++..+..++.||+.||.|||+   .+|+||||||+||||+.++.+||+|
T Consensus       143 ~~~~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~D  218 (437)
T 4aw2_A          143 FQDDNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLAD  218 (437)
T ss_dssp             EECSSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EeeCCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcc
Confidence            999999999999999999999997643 469999999999999999999999   8999999999999999999999999


Q ss_pred             ecCceeccCCCcceeeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhh
Q 035655          492 FGLARLFDHGKISHTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQH  565 (670)
Q Consensus       492 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~  565 (670)
                      ||+++.............+||+.|+|||++.     .+.++.++|||||||++|||++|+.||...... ....+.....
T Consensus       219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~  298 (437)
T 4aw2_A          219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE  298 (437)
T ss_dssp             CTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH
T ss_pred             hhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccc
Confidence            9999877655444445568999999999987     567899999999999999999999999864322 1111111110


Q ss_pred             cCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhc
Q 035655          566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEA--RPTMRQVLRYLN  615 (670)
Q Consensus       566 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~  615 (670)
                      .     ..-|.....    ....+.+++..||+.+|++  ||+++|+++|-.
T Consensus       299 ~-----~~~p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf  341 (437)
T 4aw2_A          299 R-----FQFPTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKKHPF  341 (437)
T ss_dssp             H-----CCCCSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred             c-----ccCCccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence            0     011111111    2245678888898888887  999999999754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=2.6e-40  Score=339.46  Aligned_cols=242  Identities=27%  Similarity=0.452  Sum_probs=201.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..+.||+|+||.||++....              ..+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS   86 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence            4678999999999999999997644              34678999999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.... ..+++.+++.++.|++.||+|||+   .+++||||||+||+++.++.+||+|||++...........
T Consensus        87 ~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  162 (268)
T 3sxs_A           87 NGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS  162 (268)
T ss_dssp             TCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred             CCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence            999999996643 369999999999999999999999   8999999999999999999999999999987766544444


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....+|+.|+|||.+.+..++.++||||||++++||++ |+.||........  ...... +.  ....+.       ..
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~~-~~--~~~~~~-------~~  230 (268)
T 3sxs_A          163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV--VLKVSQ-GH--RLYRPH-------LA  230 (268)
T ss_dssp             CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHHHT-TC--CCCCCT-------TS
T ss_pred             cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH--HHHHHc-CC--CCCCCC-------cC
Confidence            44567788999999998889999999999999999999 9999976432211  111111 11  111111       11


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      ...+.+++..||+.||.+||+++|++++|+...
T Consensus       231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          231 SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            246788999999999999999999999998653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3.1e-39  Score=341.53  Aligned_cols=250  Identities=21%  Similarity=0.309  Sum_probs=204.0

Q ss_pred             CCccchhhHHHhhcC----------ccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhcccc
Q 035655          349 PHRFRYSDLYTATKG----------FKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRH  402 (670)
Q Consensus       349 ~~~~~~~~l~~~t~~----------f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H  402 (670)
                      +..++++++..+++.          |+..++||+|+||.||+|+...                ..+.+.+|+.++++++|
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred             CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence            356788888888765          7778899999999999997642                24678899999999999


Q ss_pred             CceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec
Q 035655          403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID  482 (670)
Q Consensus       403 ~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld  482 (670)
                      |||+++++++...+..++||||+++++|.+++..   ..+++..+..++.|++.||.|||+   .+|+||||||+|||++
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~  175 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLT  175 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEC
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEC
Confidence            9999999999999999999999999999999854   358999999999999999999999   8999999999999999


Q ss_pred             CCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHH
Q 035655          483 ADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE  562 (670)
Q Consensus       483 ~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~  562 (670)
                      .++.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||+++||++|+.||.......  ....
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~  252 (321)
T 2c30_A          176 LDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKR  252 (321)
T ss_dssp             TTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH
T ss_pred             CCCcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHH
Confidence            99999999999998765432 22345689999999999999999999999999999999999999997643221  1111


Q ss_pred             HhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       563 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..      ....+.+..  .......+.+++..||+.||.+||+++|++++-.
T Consensus       253 ~~------~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~  297 (321)
T 2c30_A          253 LR------DSPPPKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDHPF  297 (321)
T ss_dssp             HH------HSSCCCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             Hh------cCCCCCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence            11      111122211  1122356788999999999999999999998644

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2e-40  Score=351.37  Aligned_cols=240  Identities=25%  Similarity=0.394  Sum_probs=194.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      .++|+..++||+|+||.||+|++..                     ..+.|.+|+.++++++||||++++++|.+.. .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            3568899999999999999997522                     2357889999999999999999999998754 78


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +|+||+++|+|.+++.... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        93 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence            9999999999999997654 469999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          500 HGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       500 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ..... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...........   ...+.         
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~---~~~~~---------  236 (327)
T 3poz_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---LEKGE---------  236 (327)
T ss_dssp             TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH---HHTTC---------
T ss_pred             CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHH---HHcCC---------
Confidence            44322 2233467889999999999999999999999999999999 9999986433222111   11111         


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ....+......+.+++..||+.||.+||+++|++++|+..
T Consensus       237 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  276 (327)
T 3poz_A          237 RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            0111122335678899999999999999999999998653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.4e-40  Score=341.97  Aligned_cols=240  Identities=26%  Similarity=0.460  Sum_probs=198.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..+.||+|+||.||+|....              ..+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            3578899999999999999997633              35679999999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.... ..+++..++.++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++..........
T Consensus        89 ~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  164 (269)
T 4hcu_A           89 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  164 (269)
T ss_dssp             TCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             CCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence            999999996543 368999999999999999999998   8999999999999999999999999999986654332333


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....+|+.|+|||.+.+..++.++||||||++++||++ |+.||.......  ....... .  .....+       ...
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--~~~~~~~-~--~~~~~~-------~~~  232 (269)
T 4hcu_A          165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDIST-G--FRLYKP-------RLA  232 (269)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHT-T--CCCCCC-------TTS
T ss_pred             cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHhc-C--ccCCCC-------CcC
Confidence            34567888999999999999999999999999999999 999997643221  1111111 1  011111       112


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+.+++..||+.||.+||+++|++++|+.
T Consensus       233 ~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~  263 (269)
T 4hcu_A          233 STHVYQIMNHCWRERPEDRPAFSRLLRQLAE  263 (269)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence            3567889999999999999999999999974

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=1.3e-40  Score=372.86  Aligned_cols=242  Identities=26%  Similarity=0.410  Sum_probs=203.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|...++||+|+||.||+|.+..               ..++|.+|+.+|++++||||++++++|.+.+..++||||+
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~  298 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM  298 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence            4678889999999999999998653               3578999999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++|+|.+++.......+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.........
T Consensus       299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  375 (495)
T 1opk_A          299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  375 (495)
T ss_dssp             TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred             CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence            99999999987666679999999999999999999999   899999999999999999999999999998775544333


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      .....++..|+|||++....++.++|||||||++|||++ |+.||........   ......+         .....+..
T Consensus       376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~---~~~~~~~---------~~~~~~~~  443 (495)
T 1opk_A          376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKD---------YRMERPEG  443 (495)
T ss_dssp             CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---HHHHHTT---------CCCCCCTT
T ss_pred             cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcC---------CCCCCCCC
Confidence            334467789999999999999999999999999999999 9999976432211   1111111         11112223


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ....+.+++.+||+.||.+||++.++++.|+..
T Consensus       444 ~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          444 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            345678899999999999999999999999865

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=2.8e-40  Score=349.54  Aligned_cols=253  Identities=31%  Similarity=0.436  Sum_probs=194.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------hHHHHHHHHHHHhccccCceeeeeeeeeccC----eeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR----DLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~----~~~lV~E  423 (670)
                      .++|+..++||+|+||.||+|...+             ....+..|+.++++++||||+++++++....    .+++|||
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e  102 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA  102 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence            4679999999999999999997644             2345567899999999999999999998754    4799999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccc-------cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW-------EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      |+++|+|.+++...   .++|..++.++.|++.||+|||+.+       .++|+||||||+|||++.++.+||+|||+++
T Consensus       103 ~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~  179 (322)
T 3soc_A          103 FHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL  179 (322)
T ss_dssp             CCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence            99999999999653   4899999999999999999999820       1199999999999999999999999999998


Q ss_pred             eccCCCcc-eeeccccCcCCCCccccccC-----CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc---
Q 035655          497 LFDHGKIS-HTTNVVGTIGYIAPELARTG-----KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL---  566 (670)
Q Consensus       497 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~---  566 (670)
                      ........ ......||+.|+|||++.+.     .++.++|||||||++|||++|+.||...... ...+.......   
T Consensus       180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  259 (322)
T 3soc_A          180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL  259 (322)
T ss_dssp             EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred             ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence            76554322 23345799999999998763     4567899999999999999999999752110 00110000000   


Q ss_pred             -----CCcccccCCCCCCcc-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          567 -----GQVLDVVDPNLGSSY-VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       567 -----~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                           ........+.+...+ .......+.+++.+||+.||.+|||++|+++.|+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  315 (322)
T 3soc_A          260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ  315 (322)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence                 000111122222211 22456778999999999999999999999999974

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.1e-40  Score=358.03  Aligned_cols=241  Identities=28%  Similarity=0.493  Sum_probs=185.3

Q ss_pred             hcCccccceEeeeCceeEEEeecc----c----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP----T----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~----~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+|+..    .                ..+.|.+|+.++++++||||++++++|.+.+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            357889999999999999999754    1                23578999999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.... ..+++.+++.++.||++||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       124 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence            999999999999997643 469999999999999999999998   8999999999999999999999999999987654


Q ss_pred             CCcce--eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          501 GKISH--TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       501 ~~~~~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      .....  .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||........  ... ...+.     ..  
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~--~~~-i~~~~-----~~--  269 (373)
T 2qol_A          200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--IKA-VDEGY-----RL--  269 (373)
T ss_dssp             --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH--HHH-HHTTE-----EC--
T ss_pred             CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH-HHcCC-----CC--
Confidence            33211  122345778999999999999999999999999999998 9999976432211  111 11110     00  


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                        ..+......+.+++..||+.||.+||+++++++.|+..
T Consensus       270 --~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          270 --PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             --CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence              11112335688899999999999999999999999754

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.9e-39  Score=336.92  Aligned_cols=249  Identities=25%  Similarity=0.350  Sum_probs=193.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------hHHHHHHHHHHHhc--cccCceeeeeeeeec----cCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------RMREFAAEIESLGR--LRHKHLVNLQGWCKR----KRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~L~~--l~H~nIv~l~g~~~~----~~~~~lV~E  423 (670)
                      .++|+..+.||+|+||.||+|....           ..+.+..|.+++..  ++||||+++++++..    ....++|||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e   86 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITH   86 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehh
Confidence            5689999999999999999997643           34566677777766  799999999998754    356899999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccc-----cceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW-----EQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      |+++|+|.+++..   ..+++..+++++.|++.||+|||...     +++|+||||||+|||++.++.+||+|||+++..
T Consensus        87 ~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  163 (301)
T 3q4u_A           87 YHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH  163 (301)
T ss_dssp             CCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             hccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence            9999999999943   36999999999999999999999211     289999999999999999999999999999876


Q ss_pred             cCCCcce---eeccccCcCCCCccccccC------CCCccchhHHHHHHHHHHHhC----------CCCCCCCcch--hH
Q 035655          499 DHGKISH---TTNVVGTIGYIAPELARTG------KASCSTDVFAYGVLLLEIATG----------RRPIDSDHFI--LV  557 (670)
Q Consensus       499 ~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~t~ksDV~S~Gvvl~el~tG----------~~pf~~~~~~--~~  557 (670)
                      .......   .....||+.|+|||++.+.      .++.++|||||||++|||++|          +.||......  ..
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~  243 (301)
T 3q4u_A          164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF  243 (301)
T ss_dssp             ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcch
Confidence            5543322   2334799999999998876      455799999999999999999          8888642111  11


Q ss_pred             HHHHHHhhcCCcccccCCCCC-CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          558 DWVLEFQHLGQVLDVVDPNLG-SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       558 ~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..........    ...+.+. ..........+.+++..||+.||.+|||++|+++.|+.
T Consensus       244 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          244 EDMRKVVCVD----QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             HHHHHHHTTS----CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhhHHHhcc----CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            1111111111    1122222 12344567889999999999999999999999999874

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=3.3e-39  Score=341.63  Aligned_cols=243  Identities=22%  Similarity=0.295  Sum_probs=196.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..+.||+|+||.||+++...                 ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            4689999999999999999997642                 12557899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++|+|.+++...  ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus        86 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  160 (323)
T 3tki_A           86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (323)
T ss_dssp             CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             cCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence            99999999999654  359999999999999999999998   8999999999999999999999999999987643332


Q ss_pred             -ceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          504 -SHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       504 -~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       .......||+.|+|||++.+..+ +.++|||||||+++||++|+.||.........+...... ...         ...
T Consensus       161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~-~~~---------~~~  230 (323)
T 3tki_A          161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-KTY---------LNP  230 (323)
T ss_dssp             ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT-CTT---------STT
T ss_pred             ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc-ccc---------CCc
Confidence             22345689999999999987765 779999999999999999999997643322221111111 000         001


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      .......+.+++..||+.||.+||+++|++++-+-..
T Consensus       231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~  267 (323)
T 3tki_A          231 WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (323)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence            1122356678999999999999999999999866443

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4e-39  Score=340.78  Aligned_cols=240  Identities=18%  Similarity=0.277  Sum_probs=197.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|...+.||+|+||.||++....               ....+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            4689999999999999999997643               2356789999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC--CCcEEEEeecCceeccCCCc
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA--DMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~--~~~~kL~DFGla~~~~~~~~  503 (670)
                      ++|+|.+++.... ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.  ++.+||+|||+++...... 
T Consensus        84 ~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-  158 (321)
T 1tki_A           84 SGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-  158 (321)
T ss_dssp             CCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred             CCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence            9999999996543 369999999999999999999999   89999999999999987  7899999999998775543 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                       ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  ........ ..      .........
T Consensus       159 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~-~~------~~~~~~~~~  228 (321)
T 1tki_A          159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENIMN-AE------YTFDEEAFK  228 (321)
T ss_dssp             -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHH-TC------CCCCHHHHT
T ss_pred             -ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHc-CC------CCCChhhhc
Confidence             334567999999999999888899999999999999999999999764322  11111111 11      001111111


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .....+.+++..||+.||.+|||+.|+++|-+
T Consensus       229 ~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  260 (321)
T 1tki_A          229 EISIEAMDFVDRLLVKERKSRMTASEALQHPW  260 (321)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence            22456789999999999999999999999764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=8.7e-41  Score=370.43  Aligned_cols=248  Identities=25%  Similarity=0.427  Sum_probs=202.1

Q ss_pred             hhHHHhhcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       355 ~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .+.....++|+..+.||+|+||.||+|....              ..+.|.+|+++|++++||||+++++++. .+..++
T Consensus       181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l  259 (454)
T 1qcf_A          181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI  259 (454)
T ss_dssp             TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence            3334456789999999999999999998643              3578999999999999999999999987 567899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.......+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  336 (454)
T 1qcf_A          260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED  336 (454)
T ss_dssp             EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred             EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence            9999999999999976555578999999999999999999999   8999999999999999999999999999987644


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ..........+|..|+|||++..+.++.++|||||||++|||++ |+.||.......  ....... +.     ..    
T Consensus       337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~-~~-----~~----  404 (454)
T 1qcf_A          337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALER-GY-----RM----  404 (454)
T ss_dssp             HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHH-TC-----CC----
T ss_pred             CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc-CC-----CC----
Confidence            32222233456789999999999999999999999999999999 999997643211  1111111 11     00    


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      ..+......+.+++..||+.||.+||++++|++.|+...
T Consensus       405 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence            111223456788999999999999999999999998653

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.9e-40  Score=343.89  Aligned_cols=243  Identities=26%  Similarity=0.403  Sum_probs=204.6

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ...++|+..+.||+|+||.||+|....               ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            346789999999999999999997653               34678999999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++++|.+++.......+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||++........
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  166 (288)
T 3kfa_A           90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  166 (288)
T ss_dssp             CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred             cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence            9999999999987666779999999999999999999999   8999999999999999999999999999987765554


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                      .......+|+.|+|||.+.+..++.++||||||++++||++ |+.||..........  .... .     ..+    ..+
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~--~~~~-~-----~~~----~~~  234 (288)
T 3kfa_A          167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE--LLEK-D-----YRM----ERP  234 (288)
T ss_dssp             EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH--HHHT-T-----CCC----CCC
T ss_pred             ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH--HHhc-c-----CCC----CCC
Confidence            44455678889999999999999999999999999999999 999997643221111  1111 1     011    111


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......+.+++..||+.||.+||+++|+++.|+.
T Consensus       235 ~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~  268 (288)
T 3kfa_A          235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET  268 (288)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence            2223567889999999999999999999999863

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.1e-40  Score=358.37  Aligned_cols=240  Identities=26%  Similarity=0.416  Sum_probs=195.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|...+.||+|+||.||+|....                 ..++|.+|+++|++++||||++++++|...+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            4678899999999999999998742                 12467899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++|+|.+++.... ..+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++.......
T Consensus       193 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~  268 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY  268 (377)
T ss_dssp             CCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred             cCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence            999999999997543 368999999999999999999999   8999999999999999999999999999986543321


Q ss_pred             cee-eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          504 SHT-TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       504 ~~~-~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ... ....+++.|+|||.+.++.++.++|||||||++|||++ |+.||........   ......+...         ..
T Consensus       269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~---~~~~~~~~~~---------~~  336 (377)
T 3cbl_A          269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT---REFVEKGGRL---------PC  336 (377)
T ss_dssp             ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH---HHHHHTTCCC---------CC
T ss_pred             eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcCCCC---------CC
Confidence            111 12245778999999998899999999999999999998 9999976432211   1111111110         11


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +......+.+++..||+.||.+|||++++++.|+.
T Consensus       337 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  371 (377)
T 3cbl_A          337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS  371 (377)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence            12223567889999999999999999999999864

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=4e-40  Score=340.80  Aligned_cols=241  Identities=27%  Similarity=0.448  Sum_probs=195.8

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ..++|+..+.||+|+||.||++....              ..+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            35678999999999999999997643              3467999999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.........
T Consensus       102 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  177 (283)
T 3gen_A          102 ANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS  177 (283)
T ss_dssp             TTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred             CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence            9999999997643 369999999999999999999999   899999999999999999999999999998665433222


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      .....+|+.|+|||.+.+..++.++||||||++++||++ |+.||........  ...... +  .....+       ..
T Consensus       178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~--~~~~~~-~--~~~~~~-------~~  245 (283)
T 3gen_A          178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--AEHIAQ-G--LRLYRP-------HL  245 (283)
T ss_dssp             TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHHHT-T--CCCCCC-------TT
T ss_pred             ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH--HHHHhc-c--cCCCCC-------Cc
Confidence            334467788999999998999999999999999999998 9999986432211  111111 1  011111       11


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ....+.+++..||+.||.+||+++|++++|+.
T Consensus       246 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  277 (283)
T 3gen_A          246 ASEKVYTIMYSCWHEKADERPTFKILLSNILD  277 (283)
T ss_dssp             CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            12567889999999999999999999999974

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=6.5e-40  Score=339.30  Aligned_cols=239  Identities=23%  Similarity=0.378  Sum_probs=183.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+|....                    ..+.+.+|+.++++++||||+++++++. .+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            4678899999999999999997632                    2356889999999999999999999985 467899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.... ..+++..++.++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus        93 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  168 (281)
T ss_dssp             EEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             EEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCc
Confidence            999999999999997543 369999999999999999999999   8999999999999999999999999999987655


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ..........+|+.|+|||.+.+..++.++|||||||+++||++ |+.||........  ..... .+..     +.+  
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~--~~~i~-~~~~-----~~~--  238 (281)
T 1mp8_A          169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRIE-NGER-----LPM--  238 (281)
T ss_dssp             ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHH-TTCC-----CCC--
T ss_pred             ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH--HHHHH-cCCC-----CCC--
Confidence            44333344567889999999998999999999999999999997 9999976432211  11111 1110     111  


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                        +......+.+++..||+.||.+||++.|+++.|+.
T Consensus       239 --~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  273 (281)
T 1mp8_A          239 --PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  273 (281)
T ss_dssp             --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence              12223567889999999999999999999999874

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3.4e-39  Score=342.46  Aligned_cols=235  Identities=23%  Similarity=0.352  Sum_probs=195.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .++|+..+.||+|+||.||+|....                  ..+.+.+|+++|++++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            4679999999999999999997632                  2356789999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++++||+|||+++......
T Consensus        94 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  168 (328)
T 3fe3_A           94 EYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG  168 (328)
T ss_dssp             CCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred             ECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence            999999999999654  358999999999999999999999   899999999999999999999999999998665432


Q ss_pred             cceeeccccCcCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t-~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                        ......||+.|+|||++.+..+. .++|||||||+++||++|+.||........  ... ...+..      ..    
T Consensus       169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~-i~~~~~------~~----  233 (328)
T 3fe3_A          169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL--RER-VLRGKY------RI----  233 (328)
T ss_dssp             --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-HHHCCC------CC----
T ss_pred             --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH--HHH-HHhCCC------CC----
Confidence              23456899999999999888775 799999999999999999999986442211  111 111111      11    


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +......+.+++..||+.||.+|||++|+++|-+
T Consensus       234 p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~  267 (328)
T 3fe3_A          234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW  267 (328)
T ss_dssp             CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred             CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHh
Confidence            1112345778999999999999999999999754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=6.4e-40  Score=363.29  Aligned_cols=243  Identities=26%  Similarity=0.435  Sum_probs=194.1

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ..++|+..++||+|+||.||+|.+..              ..++|.+|+++|++++||||+++++++.+ +..++||||+
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~  260 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  260 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence            35678889999999999999998654              24689999999999999999999999976 6789999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++|+|.+++.......+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.........
T Consensus       261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  337 (452)
T 1fmk_A          261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  337 (452)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence            99999999976544569999999999999999999999   899999999999999999999999999998765443333


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      .....+|..|+|||.+.++.++.++|||||||++|||++ |+.||......  +..... ..+.         ....+..
T Consensus       338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i-~~~~---------~~~~~~~  405 (452)
T 1fmk_A          338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQV-ERGY---------RMPCPPE  405 (452)
T ss_dssp             -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHH-HTTC---------CCCCCTT
T ss_pred             ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-HcCC---------CCCCCCC
Confidence            334567889999999999999999999999999999999 99999764321  111111 1111         0111223


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      ..+.+.+++..||+.||.+||+++++++.|+...
T Consensus       406 ~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            3456788999999999999999999999998653

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.3e-39  Score=346.77  Aligned_cols=251  Identities=24%  Similarity=0.339  Sum_probs=200.1

Q ss_pred             cchhhHHHhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeee
Q 035655          352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNL  408 (670)
Q Consensus       352 ~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l  408 (670)
                      +...+.....++|+..+.||+|+||.||+|.+..                      ..+.+.+|+++++++ +||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            3444555567899999999999999999996311                      235689999999999 78999999


Q ss_pred             eeeeeccC-eeEEEEeccCCCCchhhcccCCc------------------------------------------------
Q 035655          409 QGWCKRKR-DLLLVYDYIPNGSLDSLLFDNEN------------------------------------------------  439 (670)
Q Consensus       409 ~g~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~------------------------------------------------  439 (670)
                      +++|.+.+ ..++||||+++|+|.+++.....                                                
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK  171 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence            99998765 48999999999999999976432                                                


Q ss_pred             ----------------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          440 ----------------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       440 ----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                                      ..+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......
T Consensus       172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~  248 (359)
T 3vhe_A          172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD  248 (359)
T ss_dssp             ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred             ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence                            128999999999999999999999   8999999999999999999999999999986644332


Q ss_pred             -ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          504 -SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       504 -~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       .......||+.|+|||++.+..++.++|||||||+++||++ |+.||........  .......+..     +...   
T Consensus       249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~~~~~~~-----~~~~---  318 (359)
T 3vhe_A          249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLKEGTR-----MRAP---  318 (359)
T ss_dssp             CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--HHHHHHHTCC-----CCCC---
T ss_pred             chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH--HHHHHHcCCC-----CCCC---
Confidence             23345678999999999999999999999999999999998 9999976432211  1111111111     1111   


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       ......+.+++..||+.||.+||+++|++++|+.
T Consensus       319 -~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          319 -DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence             1123457889999999999999999999999974

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.8e-39  Score=359.39  Aligned_cols=237  Identities=29%  Similarity=0.395  Sum_probs=194.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCceeeeeeeeeccC-eeEEEEeccCC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR-DLLLVYDYIPN  427 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-~~~lV~E~~~~  427 (670)
                      .++|+..+.||+|+||.||+|....            ..+.|.+|+++|++++||||++++++|.+.. ..++||||+++
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~  271 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK  271 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTT
T ss_pred             hHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCC
Confidence            4678889999999999999997643            3578999999999999999999999987665 79999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++.......+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.....    ..
T Consensus       272 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~  344 (450)
T 1k9a_A          272 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QD  344 (450)
T ss_dssp             CBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----cc
Confidence            999999987655568999999999999999999999   89999999999999999999999999999854332    12


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...++..|+|||.+.+..++.++|||||||++|||++ |+.||.......  ..... ..+.     .    ...+....
T Consensus       345 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i-~~~~-----~----~~~p~~~~  412 (450)
T 1k9a_A          345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRV-EKGY-----K----MDAPDGCP  412 (450)
T ss_dssp             --CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHH-HTTC-----C----CCCCTTCC
T ss_pred             CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH-HcCC-----C----CCCCCcCC
Confidence            2367889999999999999999999999999999998 999997633211  11111 1111     1    11122234


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+++..||+.||.+||++.++++.|+.
T Consensus       413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~  442 (450)
T 1k9a_A          413 PAVYDVMKNCWHLDAATRPTFLQLREQLEH  442 (450)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            567889999999999999999999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=9e-40  Score=343.88  Aligned_cols=232  Identities=23%  Similarity=0.301  Sum_probs=185.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..++||+|+||+||+|.+..                  ....+..|+..+.++ +||||++++++|.+++..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            679999999999999999998752                  123455666666655 8999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+ +++|.+++.... ..++|.+++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus       137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~  211 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG  211 (311)
T ss_dssp             ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred             ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence            999 779999886653 469999999999999999999999   899999999999999999999999999998765432


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                        ......||+.|+|||++.+ .++.++|||||||+++||++|..|+....    .+  .....+.        ....+.
T Consensus       212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~--~~~~~~~--------~~~~~~  274 (311)
T 3p1a_A          212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GW--QQLRQGY--------LPPEFT  274 (311)
T ss_dssp             -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HH--HHHTTTC--------CCHHHH
T ss_pred             --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HH--HHHhccC--------CCcccc
Confidence              2344579999999998875 78999999999999999999977765421    11  1111111        111222


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ......+.+++..||+.||.+||+++|++++-+
T Consensus       275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~  307 (311)
T 3p1a_A          275 AGLSSELRSVLVMMLEPDPKLRATAEALLALPV  307 (311)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             cCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcc
Confidence            233467889999999999999999999998643

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.4e-39  Score=341.35  Aligned_cols=241  Identities=25%  Similarity=0.398  Sum_probs=198.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|...+.||+|+||.||++....                      ..+.+.+|++++++++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            5678999999999999999996511                      236788999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCc----------------------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCC
Q 035655          419 LLVYDYIPNGSLDSLLFDNEN----------------------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS  476 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp  476 (670)
                      ++||||+++|+|.+++.....                      ..+++.+++.++.||+.||.|||+   .+|+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccch
Confidence            999999999999999976432                      348999999999999999999999   8999999999


Q ss_pred             CcEEecCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcc
Q 035655          477 GNVLIDADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHF  554 (670)
Q Consensus       477 ~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~  554 (670)
                      +|||++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||+++||++ |+.||.....
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999999876543322 2233467889999999998889999999999999999999 9999976433


Q ss_pred             hhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          555 ILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       555 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ....   .....+.     .+.    .+......+.+++..||+.||.+||++.|++++|+.
T Consensus       259 ~~~~---~~~~~~~-----~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~  308 (314)
T 2ivs_A          259 ERLF---NLLKTGH-----RME----RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK  308 (314)
T ss_dssp             GGHH---HHHHTTC-----CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHH---HHhhcCC-----cCC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            2111   1111111     111    112223567889999999999999999999999874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.3e-39  Score=344.77  Aligned_cols=240  Identities=28%  Similarity=0.422  Sum_probs=192.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      .++|+..+.||+|+||.||+|.+..                     ..+.+.+|+.++++++||||++++++|. .+..+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   90 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ   90 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence            3578899999999999999997532                     1245678999999999999999999986 46689


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +|+||+++|+|.+++.... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        91 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             EEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             EEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence            9999999999999997653 469999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          500 HGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       500 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ..... ......||..|+|||++.+..++.++|||||||++|||++ |+.||..........   ........  ..+. 
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~---~~~~~~~~--~~~~-  240 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD---LLEKGERL--AQPQ-  240 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHH---HHHTTCBC--CCCT-
T ss_pred             cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHH---HHHcCCCC--CCCC-
Confidence            44322 2344578889999999999999999999999999999999 999998643221111   11111110  0111 


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                            .....+.+++..||+.||.+||+++|++++|+..
T Consensus       241 ------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~  274 (325)
T 3kex_A          241 ------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM  274 (325)
T ss_dssp             ------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred             ------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                  1123466789999999999999999999999754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=336.00  Aligned_cols=254  Identities=21%  Similarity=0.303  Sum_probs=201.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccC--eeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR--DLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~--~~~lV  421 (670)
                      .++|...++||+|+||.||+|....                 ..+.+.+|++++++++||||+++++++....  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            3578999999999999999997653                 2366889999999999999999999988655  78999


Q ss_pred             EeccCCCCchhhcccCCc-cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe----cCCCcEEEEeecCce
Q 035655          422 YDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI----DADMNARLGDFGLAR  496 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl----d~~~~~kL~DFGla~  496 (670)
                      |||+++++|.+++..... ..+++.+++.++.||+.||+|||+   .+|+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            999999999999976533 349999999999999999999999   899999999999999    888899999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccc--------cCCCCccchhHHHHHHHHHHHhCCCCCCCCc--chhHHHHHHHhhc
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELAR--------TGKASCSTDVFAYGVLLLEIATGRRPIDSDH--FILVDWVLEFQHL  566 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~--~~~~~~~~~~~~~  566 (670)
                      ......  ......||+.|+|||++.        +..++.++|||||||++|||++|+.||....  ....+........
T Consensus       165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (319)
T 4euu_A          165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (319)
T ss_dssp             ECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred             ecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence            765543  223457999999999886        5678999999999999999999999996421  1111111111111


Q ss_pred             C---Cccccc-----------CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCC
Q 035655          567 G---QVLDVV-----------DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDEL  619 (670)
Q Consensus       567 ~---~~~~~~-----------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  619 (670)
                      .   ......           +..............+.+++..||+.||.+||+++|++++...+..
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~  309 (319)
T 4euu_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (319)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred             CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence            0   000000           1111224456777888999999999999999999999999875543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=352.57  Aligned_cols=242  Identities=26%  Similarity=0.393  Sum_probs=199.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK  415 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~  415 (670)
                      .++|...++||+|+||.||+|....                        ..+.+.+|+++++++ +||||++++++|...
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            4678899999999999999997411                        236788999999999 899999999999999


Q ss_pred             CeeEEEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                      +..++||||+++|+|.+++....              ...+++.+++.++.||+.||.|||+   .+|+||||||+|||+
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll  224 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV  224 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEEE
Confidence            99999999999999999997643              2359999999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHH
Q 035655          482 DADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW  559 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~  559 (670)
                      +.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||+++||++ |+.||.......  .
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~--~  302 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--L  302 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--H
Confidence            9999999999999987654332 22334567889999999999999999999999999999999 999997643221  1


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      . .....+.     .+..    +......+.+++..||+.||.+||+++|++++|+..
T Consensus       303 ~-~~~~~~~-----~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  350 (382)
T 3tt0_A          303 F-KLLKEGH-----RMDK----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  350 (382)
T ss_dssp             H-HHHHTTC-----CCCC----CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             H-HHHHcCC-----CCCC----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            1 1111111     1111    112235678899999999999999999999999765

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=6.4e-40  Score=341.58  Aligned_cols=252  Identities=24%  Similarity=0.393  Sum_probs=191.1

Q ss_pred             hcCccccceEeeeCceeEEEeecc----c----------------hHHHHHHHHHHHhccccCceeeeeeeeecc--Cee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP----T----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~----~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~  418 (670)
                      .++|+..++||+|+||.||+++..    .                ..+.|.+|++++++++||||++++++|...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            467889999999999999999731    1                236788999999999999999999998654  568


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~  164 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVL  164 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred             EEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence            99999999999999997653 359999999999999999999998   89999999999999999999999999999876


Q ss_pred             cCCCc--ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHh----hcCCcccc
Q 035655          499 DHGKI--SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ----HLGQVLDV  572 (670)
Q Consensus       499 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~----~~~~~~~~  572 (670)
                      .....  .......++..|+|||.+.+..++.++|||||||+++||++|..|+...............    ......+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (295)
T 3ugc_A          165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL  244 (295)
T ss_dssp             -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred             cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence            54332  1223345778899999999999999999999999999999999998752211110000000    00000000


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +........+......+.+++..||+.||.+||+++|+++.|+.
T Consensus       245 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~  288 (295)
T 3ugc_A          245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  288 (295)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence            11111111222334668889999999999999999999999874

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.7e-38  Score=341.41  Aligned_cols=239  Identities=23%  Similarity=0.336  Sum_probs=196.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|+..+.||+|+||.||++....                      ..+.+.+|+.+|++++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            5679999999999999999997642                      135788999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC----cEEEEeecC
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM----NARLGDFGL  494 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~----~~kL~DFGl  494 (670)
                      ++||||+++|+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++    .+||+|||+
T Consensus        91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~  165 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred             EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence            9999999999999999654  469999999999999999999999   8999999999999998877    799999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ...... ...      
T Consensus       166 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~--~~~~i~-~~~------  234 (361)
T 2yab_A          166 AHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANIT-AVS------  234 (361)
T ss_dssp             CEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHHHHH-TTC------
T ss_pred             ceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH-hcC------
Confidence            98765532  2344679999999999999899999999999999999999999997643211  111111 110      


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ......+.......+.+++..||+.||.+||++.|+++|-+
T Consensus       235 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  275 (361)
T 2yab_A          235 YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW  275 (361)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence            11111111223456788999999999999999999998644

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.6e-38  Score=336.80  Aligned_cols=239  Identities=22%  Similarity=0.353  Sum_probs=196.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|...+.||+|+||.||++....                      ..+.+.+|+.+|++++||||+++++++......
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            3568899999999999999997642                      246789999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC----cEEEEeecC
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM----NARLGDFGL  494 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~----~~kL~DFGl  494 (670)
                      ++||||+++|+|.+++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++    .+||+|||+
T Consensus        90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence            9999999999999999654  469999999999999999999998   8999999999999999887    899999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ++......  ......||+.|+|||++.+..++.++|||||||+++||++|+.||........  .......       .
T Consensus       165 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~~-------~  233 (326)
T 2y0a_A          165 AHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET--LANVSAV-------N  233 (326)
T ss_dssp             CEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHHHHHT-------C
T ss_pred             CeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--HHHHHhc-------C
Confidence            98765432  23345799999999999989999999999999999999999999976432111  1111110       1


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..............+.+++..||+.||.+|||++|+++|-.
T Consensus       234 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  274 (326)
T 2y0a_A          234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW  274 (326)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred             CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            11111111222356788999999999999999999999643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.7e-40  Score=354.44  Aligned_cols=242  Identities=25%  Similarity=0.368  Sum_probs=195.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|+..+.||+|+||.||+|....                      ....+.+|+.++++++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            3578899999999999999998421                      234688999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCC-----ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC---cEEEE
Q 035655          419 LLVYDYIPNGSLDSLLFDNE-----NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM---NARLG  490 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~---~~kL~  490 (670)
                      ++||||+++|+|.+++....     ...+++.+++.++.||++||+|||+   .+|+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEEC
Confidence            99999999999999997532     2458999999999999999999999   8999999999999999555   59999


Q ss_pred             eecCceeccCCC-cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCC
Q 035655          491 DFGLARLFDHGK-ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQ  568 (670)
Q Consensus       491 DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~  568 (670)
                      |||+++...... ........||+.|+|||++.+..++.++|||||||+++||++ |+.||........  ... ...+.
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~--~~~-i~~~~  303 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--LEF-VTSGG  303 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--HHH-HHTTC
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHH-HHcCC
Confidence            999997553322 222334578999999999999999999999999999999998 9999976432211  111 11111


Q ss_pred             cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       569 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .     +.    .+......+.+++..||+.||.+||++.+|+++|+..
T Consensus       304 ~-----~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          304 R-----MD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             C-----CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C-----CC----CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            1     11    1112235678899999999999999999999999753

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=7.5e-39  Score=341.07  Aligned_cols=235  Identities=22%  Similarity=0.263  Sum_probs=194.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||+||+++...                   ....+.+|+.+|++++||||+++++++...+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            3578999999999999999997643                   234678999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++.+.  ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        84 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           84 MEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            9999999999999654  358999999999999999999999   89999999999999999999999999999854322


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      . .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ... .....      ..+    
T Consensus       159 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~-i~~~~------~~~----  224 (337)
T 1o6l_A          159 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL--FEL-ILMEE------IRF----  224 (337)
T ss_dssp             T-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-HHHCC------CCC----
T ss_pred             C-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH--HHH-HHcCC------CCC----
Confidence            2 233456899999999999999999999999999999999999999976432211  111 11111      111    


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      +......+.+++..||+.||.+||     +++|+++|-
T Consensus       225 p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~  262 (337)
T 1o6l_A          225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  262 (337)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence            112235678899999999999999     899999874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.4e-39  Score=336.00  Aligned_cols=240  Identities=28%  Similarity=0.474  Sum_probs=197.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..+.||+|+||.||+|....              ..+.+.+|++++++++||||+++++++.. +..++||||++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   90 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME   90 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence            4678999999999999999997643              34678999999999999999999999874 56899999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.......+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++...........
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  167 (279)
T 1qpc_A           91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR  167 (279)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence            9999999976544469999999999999999999998   8999999999999999999999999999987765443333


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....++..|+|||.+.+..++.++||||||++++||++ |+.||......  +....... +     ..+..    +...
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~-~-----~~~~~----~~~~  235 (279)
T 1qpc_A          168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLER-G-----YRMVR----PDNC  235 (279)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHT-T-----CCCCC----CTTC
T ss_pred             cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhc-c-----cCCCC----cccc
Confidence            44567889999999998889999999999999999999 99999764321  11111111 1     01111    1122


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+.+.+++..||+.||.+||+++++++.|+.
T Consensus       236 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  266 (279)
T 1qpc_A          236 PEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (279)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            3567889999999999999999999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-39  Score=346.32  Aligned_cols=243  Identities=26%  Similarity=0.429  Sum_probs=198.5

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      ..++|+..+.||+|+||.||+|....                      ..+.|.+|+.++++++||||++++++|.+.+.
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  124 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP  124 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence            35789999999999999999997641                      23568899999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCC----------------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccC
Q 035655          418 LLLVYDYIPNGSLDSLLFDNE----------------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK  475 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIk  475 (670)
                      .++||||+++|+|.+++....                      ...+++.+++.++.||++||.|||+   .+|+|||||
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlk  201 (343)
T 1luf_A          125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLA  201 (343)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCC
Confidence            999999999999999997642                      1469999999999999999999999   899999999


Q ss_pred             CCcEEecCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCc
Q 035655          476 SGNVLIDADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDH  553 (670)
Q Consensus       476 p~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~  553 (670)
                      |+|||++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus       202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  281 (343)
T 1luf_A          202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA  281 (343)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence            9999999999999999999986543221 22334578999999999999999999999999999999999 999997643


Q ss_pred             chhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          554 FILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       554 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ....  . .....+...     ..    +......+.+++..||+.||.+||++.+++++|+..
T Consensus       282 ~~~~--~-~~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~  333 (343)
T 1luf_A          282 HEEV--I-YYVRDGNIL-----AC----PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  333 (343)
T ss_dssp             HHHH--H-HHHHTTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             hHHH--H-HHHhCCCcC-----CC----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence            2211  1 111111111     11    112235678899999999999999999999999865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=6.1e-39  Score=329.57  Aligned_cols=236  Identities=29%  Similarity=0.489  Sum_probs=186.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .++|+..+.||+|+||.||+|....                  ..+.+.+|++++++++||||++++++|.+.+..++||
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            3578999999999999999997533                  2357889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce---EEecccCCCcEEecC--------CCcEEEEe
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV---VIHRDVKSGNVLIDA--------DMNARLGD  491 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~---ivHrDIkp~NILld~--------~~~~kL~D  491 (670)
                      ||+++++|.+++..   ..+++..++.++.|++.||.|||+   .+   |+||||||+|||++.        ++.+||+|
T Consensus        86 e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D  159 (271)
T 3dtc_A           86 EFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD  159 (271)
T ss_dssp             ECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred             EcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence            99999999999853   368999999999999999999999   66   999999999999986        67899999


Q ss_pred             ecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc
Q 035655          492 FGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD  571 (670)
Q Consensus       492 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~  571 (670)
                      ||+++......   .....||+.|+|||.+.+..++.++||||||++++||++|+.||.........+.  .. ....  
T Consensus       160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~--~~-~~~~--  231 (271)
T 3dtc_A          160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG--VA-MNKL--  231 (271)
T ss_dssp             CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH--HH-TSCC--
T ss_pred             CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHh--hh-cCCC--
Confidence            99998654432   2245799999999999999999999999999999999999999986433222111  11 1111  


Q ss_pred             ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          572 VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       572 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                        ..    ..+......+.+++..||+.||.+||+++|++++|+.
T Consensus       232 --~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          232 --AL----PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             --CC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             --CC----CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence              11    1112223568889999999999999999999999974

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=9.1e-39  Score=342.25  Aligned_cols=240  Identities=24%  Similarity=0.318  Sum_probs=195.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      .++|+..+.||+|+||.||++....                     ..+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            3568899999999999999997642                     2456889999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCC--ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc---EEEEeecC
Q 035655          420 LVYDYIPNGSLDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGL  494 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~---~kL~DFGl  494 (670)
                      +||||+++|+|.+++.+..  ...+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            9999999999998886532  3358999999999999999999999   89999999999999987665   99999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....    ..+..     
T Consensus       180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i----~~~~~-----  249 (351)
T 3c0i_A          180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGI----IKGKY-----  249 (351)
T ss_dssp             CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHH----HHTCC-----
T ss_pred             eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHH----HcCCC-----
Confidence            98765533 223445799999999999999999999999999999999999999986432221111    11110     


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                       .............+.+++..||+.||.+||++.|+++|-
T Consensus       250 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp  288 (351)
T 3c0i_A          250 -KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHP  288 (351)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             -CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCh
Confidence             000001112235678899999999999999999999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=3.1e-39  Score=330.98  Aligned_cols=236  Identities=23%  Similarity=0.384  Sum_probs=193.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeecc--CeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~lV~  422 (670)
                      .++|+..+.||+|+||.||+|....                ..+.|.+|+.++++++||||++++++|.+.  +..++||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            3578899999999999999997643                245789999999999999999999999877  7889999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce--EEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV--VIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||+++|+|.+++.......+++.+++.++.|++.||.|||+   .+  ++||||||+|||++.++.++|+|||++.....
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~  165 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS  165 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence            99999999999987766679999999999999999999998   77  99999999999999999999999998754322


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCc---cchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASC---STDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~---ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                            ....||+.|+|||.+.+..++.   ++|||||||+++||++|+.||........  ........     ..+..
T Consensus       166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~-----~~~~~  232 (271)
T 3kmu_A          166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI--GMKVALEG-----LRPTI  232 (271)
T ss_dssp             ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH--HHHHHHSC-----CCCCC
T ss_pred             ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH--HHHHHhcC-----CCCCC
Confidence                  2346899999999998765444   89999999999999999999976432211  11111111     11112


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .    ......+.+++..||+.||.+||+++|+++.|+.
T Consensus       233 ~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~  267 (271)
T 3kmu_A          233 P----PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK  267 (271)
T ss_dssp             C----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             C----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            1    2223567889999999999999999999999974

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.4e-38  Score=331.18  Aligned_cols=243  Identities=19%  Similarity=0.200  Sum_probs=197.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|+..+.||+|+||.||+|....              ..+.+.+|+.+++++ +|+|++++++++.+....++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   88 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   88 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence            4579999999999999999998532              235688999999999 7999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc-----EEEEeecCceeccC
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN-----ARLGDFGLARLFDH  500 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~-----~kL~DFGla~~~~~  500 (670)
                       +++|.+++.... ..+++.+++.++.||+.||+|||+   .+|+||||||+|||++.++.     +||+|||+++....
T Consensus        89 -~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~  163 (298)
T 1csn_A           89 -GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  163 (298)
T ss_dssp             -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             -CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence             999999997653 369999999999999999999998   89999999999999988776     99999999987765


Q ss_pred             CCcc------eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hH---HHHHHHhhcCCcc
Q 035655          501 GKIS------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LV---DWVLEFQHLGQVL  570 (670)
Q Consensus       501 ~~~~------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~---~~~~~~~~~~~~~  570 (670)
                      ....      ......||+.|+|||++.+..++.++|||||||+++||++|+.||...... ..   ............ 
T Consensus       164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-  242 (298)
T 1csn_A          164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-  242 (298)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-
T ss_pred             ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH-
Confidence            4321      234457999999999999999999999999999999999999999763211 11   111111111111 


Q ss_pred             cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       571 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ....+        ...+.+.+++..||+.||.+||++++|++.|+..
T Consensus       243 ~~~~~--------~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          243 RELCA--------GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             HHHTT--------TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHh--------hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            11111        1235678899999999999999999999999754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.8e-38  Score=350.32  Aligned_cols=241  Identities=22%  Similarity=0.278  Sum_probs=194.5

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ..++|+..+.||+|+||.||++....                  ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            35679999999999999999997532                  235688999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec---CCCcEEEEeecCceec
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID---ADMNARLGDFGLARLF  498 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld---~~~~~kL~DFGla~~~  498 (670)
                      |||+++|+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++   .++.+||+|||+++..
T Consensus        89 ~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~  163 (444)
T 3soa_A           89 FDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV  163 (444)
T ss_dssp             ECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred             EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence            9999999999999765  359999999999999999999999   8999999999999998   4578999999999866


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ... ...+.. ....+.  
T Consensus       164 ~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~--~~~-i~~~~~-~~~~~~--  236 (444)
T 3soa_A          164 EGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL--YQQ-IKAGAY-DFPSPE--  236 (444)
T ss_dssp             CTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHHTCC-CCCTTT--
T ss_pred             cCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH--HHH-HHhCCC-CCCccc--
Confidence            5433 223456899999999999999999999999999999999999999976432211  111 111111 111111  


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                         .......+.+++..||+.||.+||++.|+++|-+
T Consensus       237 ---~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~  270 (444)
T 3soa_A          237 ---WDTVTPEAKDLINKMLTINPSKRITAAEALKHPW  270 (444)
T ss_dssp             ---TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred             ---cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence               1122356788999999999999999999999743

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=5.8e-39  Score=340.32  Aligned_cols=242  Identities=18%  Similarity=0.203  Sum_probs=195.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|+..+.||+|+||.||+|....              ..+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            4679999999999999999998532              234688999999999 9999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc-----EEEEeecCceeccC
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN-----ARLGDFGLARLFDH  500 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~-----~kL~DFGla~~~~~  500 (670)
                       +++|.+++... ...+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.     +||+|||+++....
T Consensus        88 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A           88 -GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred             -CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence             99999999765 3479999999999999999999999   89999999999999999887     99999999987654


Q ss_pred             CCcc------eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc--CCccc
Q 035655          501 GKIS------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL--GQVLD  571 (670)
Q Consensus       501 ~~~~------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~--~~~~~  571 (670)
                      ....      ......||+.|+|||++.+..++.++|||||||+++||++|+.||...... ..+........  ....+
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~  242 (330)
T 2izr_A          163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIE  242 (330)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred             CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHH
Confidence            3321      124568999999999999999999999999999999999999999863221 11111111000  00000


Q ss_pred             ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          572 VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       572 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...    ..    .+ .+.+++..||+.||.+||++++|++.|+.
T Consensus       243 ~~~----~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~  278 (330)
T 2izr_A          243 VLC----EN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD  278 (330)
T ss_dssp             HHT----TT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             HHh----cc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence            000    11    12 67889999999999999999999998864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.6e-38  Score=334.37  Aligned_cols=249  Identities=24%  Similarity=0.291  Sum_probs=192.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..++||+|+||.||++....                 ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            4679999999999999999998643                 13568899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |++ |+|.+++.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... 
T Consensus       100 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-  173 (311)
T 3niz_A          100 FME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-  173 (311)
T ss_dssp             CCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred             CCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence            998 58888886543 369999999999999999999998   899999999999999999999999999998765432 


Q ss_pred             ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhcCCc------------
Q 035655          504 SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHLGQV------------  569 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~~~~------------  569 (670)
                      .......||+.|+|||++.+ ..++.++|||||||+++||++|+.||..... ...............            
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  253 (311)
T 3niz_A          174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW  253 (311)
T ss_dssp             C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence            22344578999999999876 5689999999999999999999999976321 111111111100000            


Q ss_pred             ----ccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          570 ----LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       570 ----~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                          ...................+.+++..||+.||.+|||++|+++|-.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  303 (311)
T 3niz_A          254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY  303 (311)
T ss_dssp             HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence                0000000000011112356788999999999999999999998643

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=4.4e-39  Score=341.14  Aligned_cols=245  Identities=24%  Similarity=0.372  Sum_probs=198.5

Q ss_pred             HHhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeec
Q 035655          358 YTATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKR  414 (670)
Q Consensus       358 ~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~  414 (670)
                      ....++|...+.||+|+||.||+|....                      ..+.+.+|+.+++++ +||||++++++|.+
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            3456789999999999999999997521                      235688999999999 89999999999999


Q ss_pred             cCeeEEEEeccCCCCchhhcccCC------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNE------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID  482 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld  482 (670)
                      .+..++||||+++|+|.+++....            ...+++..++.++.|++.||.|||+   .+|+||||||+|||++
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLT  198 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEE
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEEC
Confidence            999999999999999999996532            2358999999999999999999999   8999999999999999


Q ss_pred             CCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHH
Q 035655          483 ADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWV  560 (670)
Q Consensus       483 ~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~  560 (670)
                      .++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||+++||++ |+.||........  .
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~  276 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--F  276 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--H
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--H
Confidence            9999999999999866543322 2334567889999999999999999999999999999998 9999976332211  1


Q ss_pred             HHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       561 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ........     .+..    +......+.+++..||+.||.+||++.|++++|+.
T Consensus       277 ~~~~~~~~-----~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  323 (333)
T 2i1m_A          277 YKLVKDGY-----QMAQ----PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE  323 (333)
T ss_dssp             HHHHHHTC-----CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhcCC-----CCCC----CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence            11111110     0111    11123567889999999999999999999999973

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1e-38  Score=335.21  Aligned_cols=240  Identities=28%  Similarity=0.432  Sum_probs=188.7

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGS  429 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~gs  429 (670)
                      ++|+..+.||+|+||.||++....            ..+.|.+|++++++++||||+++++++.+  ..++||||+++|+
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~   85 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGS   85 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCB
T ss_pred             hHeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCC
Confidence            568889999999999999997643            35678999999999999999999999874  4899999999999


Q ss_pred             chhhcccCCc-cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc-EEEEeecCceeccCCCcceee
Q 035655          430 LDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN-ARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       430 L~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~-~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |.+++..... ..+++..++.++.|+++||+|||+...++|+||||||+|||++.++. +||+|||++......    ..
T Consensus        86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~~  161 (307)
T 2eva_A           86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MT  161 (307)
T ss_dssp             HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------
T ss_pred             HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----cc
Confidence            9999976543 34789999999999999999999854468999999999999998886 799999999755432    23


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++.+..++.++|||||||+++||++|+.||...........+.... +.     .+....    ....
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~-----~~~~~~----~~~~  231 (307)
T 2eva_A          162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN-GT-----RPPLIK----NLPK  231 (307)
T ss_dssp             ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT-TC-----CCCCBT----TCCH
T ss_pred             cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc-CC-----CCCccc----ccCH
Confidence            3469999999999999999999999999999999999999997533222222221111 11     111111    2235


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .+.+++..||+.||.+||++++++++|+..
T Consensus       232 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~  261 (307)
T 2eva_A          232 PIESLMTRCWSKDPSQRPSMEEIVKIMTHL  261 (307)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            678899999999999999999999999754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.7e-39  Score=343.32  Aligned_cols=244  Identities=24%  Similarity=0.383  Sum_probs=198.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccC
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKR  416 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~  416 (670)
                      ..++|...+.||+|+||.||+|....                      ..+.+.+|+.+++++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            45789999999999999999998510                      235788999999999 8999999999999999


Q ss_pred             eeEEEEeccCCCCchhhcccCCc---------------------cccCHHHHHHHHHHHHHHhhhccccccceEEecccC
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNEN---------------------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVK  475 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIk  475 (670)
                      ..++||||+++|+|.+++.....                     ..+++..++.++.||+.||.|||+   .+|+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence            99999999999999999976532                     248999999999999999999999   899999999


Q ss_pred             CCcEEecCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCc
Q 035655          476 SGNVLIDADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDH  553 (670)
Q Consensus       476 p~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~  553 (670)
                      |+|||++.++.+||+|||++......... ......||+.|+|||.+.+..++.++|||||||+++||++ |+.||....
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            99999999999999999999876544322 2334578899999999999999999999999999999998 999997643


Q ss_pred             chhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          554 FILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       554 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ....  .......+.     .+.    .+......+.+++..||+.||.+||++.+++++|+..
T Consensus       280 ~~~~--~~~~~~~~~-----~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  332 (344)
T 1rjb_A          280 VDAN--FYKLIQNGF-----KMD----QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ  332 (344)
T ss_dssp             CSHH--HHHHHHTTC-----CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cHHH--HHHHHhcCC-----CCC----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            2111  111111110     111    1112235678899999999999999999999999854

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.4e-38  Score=340.55  Aligned_cols=242  Identities=22%  Similarity=0.273  Sum_probs=182.9

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ..++|+..+.||+|+||.||+|....              ..+.+.+|++++++++||||++++++|.+.+..++||||+
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            45679999999999999999998753              2356789999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC---CCcEEEEeecCceeccCCC
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~---~~~~kL~DFGla~~~~~~~  502 (670)
                      ++|+|.+++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++......
T Consensus       131 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~  205 (349)
T 2w4o_A          131 TGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV  205 (349)
T ss_dssp             CSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred             CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence            999999999654  358999999999999999999998   89999999999999975   8899999999998664432


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                        ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........+  ........ ....     ...
T Consensus       206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~~i~~~~~-~~~~-----~~~  275 (349)
T 2w4o_A          206 --LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF--RRILNCEY-YFIS-----PWW  275 (349)
T ss_dssp             ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH--HHHHTTCC-CCCT-----TTT
T ss_pred             --ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH--HHHHhCCC-ccCC-----chh
Confidence              2334579999999999999999999999999999999999999997643221111  11111111 0111     111


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......+.+++..||+.||.+||++.|++++-.-
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~  309 (349)
T 2w4o_A          276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV  309 (349)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred             hhCCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence            2233567889999999999999999999997543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=3.4e-38  Score=329.20  Aligned_cols=235  Identities=23%  Similarity=0.357  Sum_probs=187.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccch------------------------------------------HHHHHHHHHHHh
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR------------------------------------------MREFAAEIESLG  398 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~------------------------------------------~~~f~~Ei~~L~  398 (670)
                      .++|+..+.||+|+||.||+|+....                                          .+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            36799999999999999999975320                                          245789999999


Q ss_pred             ccccCceeeeeeeeec--cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCC
Q 035655          399 RLRHKHLVNLQGWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS  476 (670)
Q Consensus       399 ~l~H~nIv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp  476 (670)
                      +++||||+++++++.+  .+..++||||+++++|.+++..   ..+++.+++.++.||+.||.|||+   .+|+||||||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp  165 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKP  165 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCG
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCH
Confidence            9999999999999986  5689999999999999987643   369999999999999999999999   8999999999


Q ss_pred             CcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCc
Q 035655          477 GNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK---ASCSTDVFAYGVLLLEIATGRRPIDSDH  553 (670)
Q Consensus       477 ~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~t~ksDV~S~Gvvl~el~tG~~pf~~~~  553 (670)
                      +|||++.++.+||+|||+++...... .......||+.|+|||.+.+..   ++.++|||||||+++||++|+.||....
T Consensus       166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  244 (298)
T 2zv2_A          166 SNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER  244 (298)
T ss_dssp             GGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence            99999999999999999998765433 2234457999999999987765   3788999999999999999999997643


Q ss_pred             chhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          554 FILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       554 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ...  ...... .... ..  +. ..    .....+.+++.+||+.||.+||+++|+++|
T Consensus       245 ~~~--~~~~~~-~~~~-~~--~~-~~----~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          245 IMC--LHSKIK-SQAL-EF--PD-QP----DIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             HHH--HHHHHH-HCCC-CC--CS-SS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             HHH--HHHHHh-cccC-CC--CC-cc----ccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            221  111111 1111 00  00 01    123567889999999999999999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.8e-38  Score=330.07  Aligned_cols=245  Identities=28%  Similarity=0.481  Sum_probs=185.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|+..++||+|+||.||+|....               ..+.|.+|++++++++||||+++++++ .....++||||+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~  101 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWC  101 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEec
Confidence            4679999999999999999997643               246789999999999999999999976 455689999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC-cc
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK-IS  504 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~-~~  504 (670)
                      ++++|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus       102 ~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  177 (289)
T 3og7_A          102 EGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH  177 (289)
T ss_dssp             CEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred             CCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence            9999999996553 469999999999999999999999   899999999999999999999999999997654322 22


Q ss_pred             eeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ......||+.|+|||.+.   +..++.++|||||||+++||++|+.||......  +........+...    +.+ ...
T Consensus       178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~----~~~-~~~  250 (289)
T 3og7_A          178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQIIEMVGRGSLS----PDL-SKV  250 (289)
T ss_dssp             ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--HHHHHHHHHTSCC----CCT-TSS
T ss_pred             cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--HHHHHHhcccccC----cch-hhc
Confidence            234457999999999886   567889999999999999999999999763221  1111111111111    111 111


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .......+.+++..||+.||.+||+++|+++.|+..
T Consensus       251 ~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            122335688899999999999999999999999754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2e-39  Score=332.23  Aligned_cols=240  Identities=26%  Similarity=0.444  Sum_probs=197.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..+.||+|+||.||++....              ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            3578889999999999999997643              34678999999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +++|.+++.... ..+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++..........
T Consensus        87 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  162 (267)
T 3t9t_A           87 HGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  162 (267)
T ss_dssp             TCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             CCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence            999999997653 368999999999999999999999   8999999999999999999999999999986544322222


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....++..|+|||++.+..++.++||||||++++||++ |+.||.......  ....... +.  ....+       ...
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~i~~-~~--~~~~~-------~~~  230 (267)
T 3t9t_A          163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDIST-GF--RLYKP-------RLA  230 (267)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHT-TC--CCCCC-------TTS
T ss_pred             ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HHHHHhc-CC--cCCCC-------ccC
Confidence            33467889999999998899999999999999999999 899997643221  1111111 10  01111       112


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+.+++.+||+.||.+||++++++++|+.
T Consensus       231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~  261 (267)
T 3t9t_A          231 STHVYQIMNHCWRERPEDRPAFSRLLRQLAE  261 (267)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            3567889999999999999999999999974

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.8e-39  Score=341.69  Aligned_cols=241  Identities=25%  Similarity=0.385  Sum_probs=190.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      .++|+..++||+|+||.||+|.+..                     ..+.+.+|+.++++++||||++++++|.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            4679999999999999999997522                     3467899999999999999999999998764 88


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +|+||+++|+|.+++.... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            9999999999999997654 369999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          500 HGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       500 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      .... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...........   ...+.     ..  
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~---~~~~~-----~~--  238 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI---LEKGE-----RL--  238 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH---HHTTC-----CC--
T ss_pred             CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH---HHcCC-----CC--
Confidence            4332 22233467889999999999999999999999999999999 9999986433222111   11111     01  


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                        ..+......+.+++..||+.||.+||+++|+++.|+...
T Consensus       239 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          239 --PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             --CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence              111122346788999999999999999999999998653

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.9e-38  Score=341.38  Aligned_cols=239  Identities=23%  Similarity=0.303  Sum_probs=195.0

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ..++|+..+.||+|+||.||++....                  ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            35679999999999999999997642                  235688999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC---cEEEEeecCceec
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM---NARLGDFGLARLF  498 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~---~~kL~DFGla~~~  498 (670)
                      |||+++|+|.+++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++   .+||+|||++...
T Consensus       107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~  181 (362)
T 2bdw_A          107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  181 (362)
T ss_dssp             ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred             EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence            9999999999998654  358999999999999999999999   8999999999999998654   5999999999876


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......  .... ...+..      ...
T Consensus       182 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--~~~~-i~~~~~------~~~  250 (362)
T 2bdw_A          182 NDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYAQ-IKAGAY------DYP  250 (362)
T ss_dssp             TTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-HHHTCC------CCC
T ss_pred             cCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHH-HHhCCC------CCC
Confidence            5432  2334679999999999999899999999999999999999999997643221  1111 111111      011


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ..........+.+++..||+.||.+||++.|++++-
T Consensus       251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  286 (362)
T 2bdw_A          251 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP  286 (362)
T ss_dssp             TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSH
T ss_pred             cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence            111122335678899999999999999999999874

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=6e-39  Score=350.47  Aligned_cols=247  Identities=23%  Similarity=0.313  Sum_probs=200.6

Q ss_pred             chhhHHHhhcCccccceEeeeCceeEEEeeccch-------------------HHHHHHHHHHHhccccCceeeeeeeee
Q 035655          353 RYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRLRHKHLVNLQGWCK  413 (670)
Q Consensus       353 ~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~  413 (670)
                      .+.++....++|+..++||+|+||+||+++....                   .+.+.+|+.+++.++||||++++++|.
T Consensus        60 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~  139 (410)
T 3v8s_A           60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ  139 (410)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            3445566778999999999999999999987541                   123779999999999999999999999


Q ss_pred             ccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       414 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      +.+.+++||||+++|+|.+++...   .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||
T Consensus       140 ~~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG  213 (410)
T 3v8s_A          140 DDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFG  213 (410)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccc
Confidence            999999999999999999998643   58999999999999999999999   899999999999999999999999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccccCC----CCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCC
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELARTGK----ASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQ  568 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~  568 (670)
                      +++.............+||+.|+|||++.+..    ++.++|||||||++|||++|+.||...... ....+......  
T Consensus       214 ~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--  291 (410)
T 3v8s_A          214 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS--  291 (410)
T ss_dssp             TCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH--
T ss_pred             eeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc--
Confidence            99877655444445678999999999987655    788999999999999999999999864422 11111110000  


Q ss_pred             cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCC--CCCHHHHHHHhc
Q 035655          569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEA--RPTMRQVLRYLN  615 (670)
Q Consensus       569 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~  615 (670)
                         ..-|.. .    .....+.+++..||+.+|.+  ||+++||++|-.
T Consensus       292 ---~~~p~~-~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~  332 (410)
T 3v8s_A          292 ---LTFPDD-N----DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF  332 (410)
T ss_dssp             ---CCCCTT-C----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred             ---ccCCCc-c----cccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence               001110 0    11255778889999999988  999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.4e-39  Score=350.46  Aligned_cols=251  Identities=22%  Similarity=0.239  Sum_probs=201.4

Q ss_pred             ccchhhHHHhhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeee
Q 035655          351 RFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGW  411 (670)
Q Consensus       351 ~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~  411 (670)
                      .+.+++.....++|+..+.||+|+||+||+++...                   ..+.+.+|..++.+++||||++++++
T Consensus        50 ~~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~  129 (412)
T 2vd5_A           50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA  129 (412)
T ss_dssp             HHHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred             hhhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence            45566667778999999999999999999998743                   11347789999999999999999999


Q ss_pred             eeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEe
Q 035655          412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD  491 (670)
Q Consensus       412 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~D  491 (670)
                      +.+.+.+++||||+++|+|.+++.+.. ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|
T Consensus       130 ~~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~D  205 (412)
T 2vd5_A          130 FQDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLAD  205 (412)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred             EeeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEee
Confidence            999999999999999999999997543 369999999999999999999998   8999999999999999999999999


Q ss_pred             ecCceeccCCCcceeeccccCcCCCCccccc-------cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHH
Q 035655          492 FGLARLFDHGKISHTTNVVGTIGYIAPELAR-------TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEF  563 (670)
Q Consensus       492 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~  563 (670)
                      ||+++.............+||+.|+|||++.       ...++.++|||||||++|||++|+.||....... ...+...
T Consensus       206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~  285 (412)
T 2vd5_A          206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY  285 (412)
T ss_dssp             CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH
T ss_pred             chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence            9999877654433344568999999999987       3568999999999999999999999998643221 1111110


Q ss_pred             hhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCC---CCHHHHHHHhc
Q 035655          564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEAR---PTMRQVLRYLN  615 (670)
Q Consensus       564 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~L~  615 (670)
                      ....     ..|...    ......+.+++..||+ +|.+|   |+++|+++|-.
T Consensus       286 ~~~~-----~~p~~~----~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf  330 (412)
T 2vd5_A          286 KEHL-----SLPLVD----EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF  330 (412)
T ss_dssp             HHHC-----CCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred             ccCc-----CCCccc----cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence            0000     011111    1123567789999999 99998   69999998753

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.5e-39  Score=341.58  Aligned_cols=249  Identities=24%  Similarity=0.388  Sum_probs=187.4

Q ss_pred             hhHHHhhcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeee
Q 035655          355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCK  413 (670)
Q Consensus       355 ~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~  413 (670)
                      +++....++|+..+.||+|+||.||+|....                     ..+.+.+|++++++++||||+++++++.
T Consensus        16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   95 (323)
T 3qup_A           16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL   95 (323)
T ss_dssp             CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred             hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence            3444456789999999999999999997532                     2356889999999999999999999998


Q ss_pred             ccCee------EEEEeccCCCCchhhcccCC----ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC
Q 035655          414 RKRDL------LLVYDYIPNGSLDSLLFDNE----NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA  483 (670)
Q Consensus       414 ~~~~~------~lV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~  483 (670)
                      .....      ++|+||+++|+|.+++....    ...+++.+++.++.|++.||.|||+   .+|+||||||+|||++.
T Consensus        96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~  172 (323)
T 3qup_A           96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAE  172 (323)
T ss_dssp             CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECT
T ss_pred             ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcC
Confidence            77654      99999999999999996432    2258999999999999999999999   89999999999999999


Q ss_pred             CCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHH
Q 035655          484 DMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVL  561 (670)
Q Consensus       484 ~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~  561 (670)
                      ++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||+++||++ |+.||........  ..
T Consensus       173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~  250 (323)
T 3qup_A          173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YN  250 (323)
T ss_dssp             TSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HH
T ss_pred             CCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HH
Confidence            99999999999986654332 22233467889999999999999999999999999999999 9999976432211  11


Q ss_pred             HHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          562 EFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       562 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      ... .+..     +    ..+......+.+++..||+.||.+||++.++++.|+...
T Consensus       251 ~~~-~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l  297 (323)
T 3qup_A          251 YLI-GGNR-----L----KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL  297 (323)
T ss_dssp             HHH-TTCC-----C----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHh-cCCC-----C----CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            111 1110     1    111222356889999999999999999999999988653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=8.5e-38  Score=339.11  Aligned_cols=240  Identities=20%  Similarity=0.323  Sum_probs=196.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|+..+.||+|+||.||+|....                ....+.+|+++|++++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            4679999999999999999997643                235688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC--CCcEEEEeecCceeccCCC
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA--DMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~--~~~~kL~DFGla~~~~~~~  502 (670)
                      +++|+|.+++.... ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.  ++.+||+|||+++......
T Consensus       130 ~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~  205 (387)
T 1kob_A          130 LSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  205 (387)
T ss_dssp             CCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence            99999999996543 369999999999999999999998   89999999999999974  4679999999998775543


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                        ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  +........ ..  ..++..    .
T Consensus       206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~i~~~-~~--~~~~~~----~  274 (387)
T 1kob_A          206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQNVKRC-DW--EFDEDA----F  274 (387)
T ss_dssp             --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHC-CC--CCCSST----T
T ss_pred             --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--HHHHHHHhC-CC--CCCccc----c
Confidence              233457999999999999999999999999999999999999999864321  111111111 10  011111    1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ......+.+++..||+.||.+||++.|++++-.
T Consensus       275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~  307 (387)
T 1kob_A          275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW  307 (387)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhhCcc
Confidence            122356788999999999999999999999754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.7e-38  Score=336.61  Aligned_cols=250  Identities=22%  Similarity=0.256  Sum_probs=195.3

Q ss_pred             chhhHHHhhcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeee
Q 035655          353 RYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGW  411 (670)
Q Consensus       353 ~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~  411 (670)
                      .-.++....++|+..+.||+|+||.||+|....                     ..+.+.+|++++++++||||++++++
T Consensus        17 q~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~   96 (345)
T 3hko_A           17 QGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEV   96 (345)
T ss_dssp             CCBCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cCchhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehh
Confidence            334566778899999999999999999997633                     23568899999999999999999999


Q ss_pred             eeccCeeEEEEeccCCCCchhhcccC--------------------------------------CccccCHHHHHHHHHH
Q 035655          412 CKRKRDLLLVYDYIPNGSLDSLLFDN--------------------------------------ENFVLSWEQRFNIIKG  453 (670)
Q Consensus       412 ~~~~~~~~lV~E~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~q  453 (670)
                      |.+.+..++||||+++|+|.+++...                                      ....+++..++.++.|
T Consensus        97 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q  176 (345)
T 3hko_A           97 YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ  176 (345)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHH
T ss_pred             hccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHH
Confidence            99999999999999999999998521                                      0223467888999999


Q ss_pred             HHHHhhhccccccceEEecccCCCcEEecCCC--cEEEEeecCceeccCCCc---ceeeccccCcCCCCcccccc--CCC
Q 035655          454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM--NARLGDFGLARLFDHGKI---SHTTNVVGTIGYIAPELART--GKA  526 (670)
Q Consensus       454 ia~gL~yLH~~~~~~ivHrDIkp~NILld~~~--~~kL~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~  526 (670)
                      |+.||+|||+   .+|+||||||+|||++.++  .+||+|||+++.......   .......||+.|+|||++.+  ..+
T Consensus       177 i~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  253 (345)
T 3hko_A          177 IFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESY  253 (345)
T ss_dssp             HHHHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCC
T ss_pred             HHHHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCC
Confidence            9999999999   8999999999999998776  899999999987644221   12345679999999999865  678


Q ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCC
Q 035655          527 SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPT  606 (670)
Q Consensus       527 t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs  606 (670)
                      +.++|||||||+++||++|+.||.......  ..........       .............+.+++..||+.||.+||+
T Consensus       254 ~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  324 (345)
T 3hko_A          254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDAD--TISQVLNKKL-------CFENPNYNVLSPLARDLLSNLLNRNVDERFD  324 (345)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCC-------CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCCChHH--HHHHHHhccc-------ccCCcccccCCHHHHHHHHHHcCCChhHCCC
Confidence            999999999999999999999997643221  1111111110       0111111122356788999999999999999


Q ss_pred             HHHHHHHh
Q 035655          607 MRQVLRYL  614 (670)
Q Consensus       607 ~~evl~~L  614 (670)
                      +.|++++-
T Consensus       325 ~~~~l~hp  332 (345)
T 3hko_A          325 AMRALQHP  332 (345)
T ss_dssp             HHHHHHSH
T ss_pred             HHHHhcCh
Confidence            99999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.4e-38  Score=345.36  Aligned_cols=248  Identities=19%  Similarity=0.248  Sum_probs=193.9

Q ss_pred             hcCccccceEeee--CceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTG--GFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G--~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..++||+|  +||.||+++...                  ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            5679999999999  999999998653                  23567789999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.......+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++.....
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence            9999999999999987655679999999999999999999999   8999999999999999999999999999875432


Q ss_pred             CCc------ceeeccccCcCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccc
Q 035655          501 GKI------SHTTNVVGTIGYIAPELART--GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       501 ~~~------~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~  572 (670)
                      ...      .......||+.|+|||++.+  ..++.++|||||||+++||++|+.||..........  . ...+.....
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~-~~~~~~~~~  257 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL--E-KLNGTVPCL  257 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH--H-C--------
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH--H-HhcCCCCcc
Confidence            211      11223478999999999987  578999999999999999999999997632211100  0 000000000


Q ss_pred             cC------------------------------CC------CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          573 VD------------------------------PN------LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       573 ~d------------------------------~~------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .+                              +.      ....+.......+.+++.+||+.||.+|||++|+++|-
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp  335 (389)
T 3gni_B          258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS  335 (389)
T ss_dssp             ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSG
T ss_pred             ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCH
Confidence            00                              00      00011222345688999999999999999999999873

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.2e-38  Score=329.66  Aligned_cols=248  Identities=23%  Similarity=0.281  Sum_probs=190.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|+..++||+|+||+||+|....                  ..+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            578999999999999999997643                  23678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++ +|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  155 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-  155 (292)
T ss_dssp             CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred             cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence            9975 5656554432 469999999999999999999999   899999999999999999999999999998765432 


Q ss_pred             ceeeccccCcCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcchh--HHHHHHHhhc---CC---cccccC
Q 035655          504 SHTTNVVGTIGYIAPELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFIL--VDWVLEFQHL---GQ---VLDVVD  574 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~--~~~~~~~~~~---~~---~~~~~d  574 (670)
                      .......||+.|+|||++.+.. ++.++|||||||+++||++|..|+.......  ..........   ..   .....+
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  235 (292)
T 3o0g_A          156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD  235 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred             ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence            2234457899999999987765 7999999999999999999988864422211  1111111000   00   000000


Q ss_pred             ---------CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          575 ---------PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       575 ---------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                               ..............+.+++..||+.||.+|||++|+++|-+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  285 (292)
T 3o0g_A          236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY  285 (292)
T ss_dssp             CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence                     00001111223456788999999999999999999998644

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.6e-38  Score=331.67  Aligned_cols=242  Identities=22%  Similarity=0.349  Sum_probs=198.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~  417 (670)
                      .++|+..+.||+|+||.||+|....                      ..+.+.+|+.+++++ +||||++++++|...+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            4679999999999999999997410                      246788999999999 99999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCCc----------------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          418 LLLVYDYIPNGSLDSLLFDNEN----------------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                      .++||||+++|+|.+++.....                ..+++.+++.++.|++.||.|||+   .+++||||||+|||+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence            9999999999999999976542                248999999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHH
Q 035655          482 DADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW  559 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~  559 (670)
                      +.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||+++||++ |+.||......... 
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-  257 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-  257 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH-
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH-
Confidence            99999999999999876554322 2234567889999999999999999999999999999999 99999764322111 


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       .......     ..+..    +......+.+++..||+.||.+||+++|++++|+.
T Consensus       258 -~~~~~~~-----~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  304 (313)
T 1t46_A          258 -YKMIKEG-----FRMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (313)
T ss_dssp             -HHHHHHT-----CCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -HHHhccC-----CCCCC----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence             1111111     01111    11223567889999999999999999999999974

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2e-38  Score=328.81  Aligned_cols=236  Identities=24%  Similarity=0.357  Sum_probs=190.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      .++|...+.||+|+||.||+|....                       ..+.+.+|++++++++||||+++++++...+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            4578899999999999999986432                       24678899999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc--------EEE
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN--------ARL  489 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~--------~kL  489 (670)
                      .++||||+++|+|.+++.... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.        +||
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             CEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeee
Confidence            999999999999999997653 358999999999999999999999   89999999999999998887        999


Q ss_pred             EeecCceeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCC-CCCCcchhHHHHHHHhhcC
Q 035655          490 GDFGLARLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRP-IDSDHFILVDWVLEFQHLG  567 (670)
Q Consensus       490 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~p-f~~~~~~~~~~~~~~~~~~  567 (670)
                      +|||++.....     .....||+.|+|||++.+ ..++.++|||||||+++||++|..| +.........  .......
T Consensus       163 ~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~--~~~~~~~  235 (289)
T 4fvq_A          163 SDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL--QFYEDRH  235 (289)
T ss_dssp             CCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH--HHHHTTC
T ss_pred             ccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH--HHhhccC
Confidence            99999864432     233468999999999987 6789999999999999999996554 4432221111  1111111


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCC
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDEL  619 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  619 (670)
                      ..    .+    ..    ...+.+++..||+.||.+||+++|++++|+....
T Consensus       236 ~~----~~----~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          236 QL----PA----PK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             CC----CC----CS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             CC----CC----CC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            11    11    11    2346789999999999999999999999997654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=2.1e-38  Score=327.71  Aligned_cols=240  Identities=23%  Similarity=0.342  Sum_probs=191.4

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      ..++|...+.||+|+||.||+|+...                    ..+.|.+|+.++++++||||+++++++.++ ..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence            35679999999999999999987421                    246788999999999999999999998754 568


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||||+++++|.+++.... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....
T Consensus        89 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred             EEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence            9999999999999997543 358999999999999999999998   899999999999999999999999999998765


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ...........+|+.|+|||.+.+..++.++|||||||+++||++ |+.||.........  .... .+..     +.. 
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~--~~~~-~~~~-----~~~-  235 (281)
T 3cc6_A          165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI--GVLE-KGDR-----LPK-  235 (281)
T ss_dssp             --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH--HHHH-HTCC-----CCC-
T ss_pred             cccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH--HHHh-cCCC-----CCC-
Confidence            544333444567889999999998999999999999999999998 99999753322111  1111 1111     011 


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                         +......+.+++..||+.||.+||++.|++++|+.
T Consensus       236 ---~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  270 (281)
T 3cc6_A          236 ---PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSD  270 (281)
T ss_dssp             ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHH
Confidence               11123567889999999999999999999999974

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=342.84  Aligned_cols=235  Identities=26%  Similarity=0.347  Sum_probs=192.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                   ..+.+.+|+.+|++++||||++++++|.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            578999999999999999997643                   2356789999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        95 e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  169 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET  169 (384)
T ss_dssp             CCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence            999999999999754  359999999999999999999999   899999999999999999999999999998765432


Q ss_pred             cceeeccccCcCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          503 ISHTTNVVGTIGYIAPELART---GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                        ......||+.|+|||++..   ..++.++|||||||++|||++|+.||...................      ..   
T Consensus       170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~------~~---  238 (384)
T 4fr4_A          170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV------VT---  238 (384)
T ss_dssp             --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC------CC---
T ss_pred             --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc------cC---
Confidence              3345689999999999864   458999999999999999999999997532221111111111110      11   


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHH
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPT-MRQVLRY  613 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~  613 (670)
                       ++......+.+++..||+.||.+||+ ++++++|
T Consensus       239 -~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h  272 (384)
T 4fr4_A          239 -YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF  272 (384)
T ss_dssp             -CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred             -CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence             11122356788999999999999998 8888764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.6e-38  Score=330.19  Aligned_cols=247  Identities=26%  Similarity=0.342  Sum_probs=189.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..+.||+|+||.||+|....                 ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            478899999999999999997632                 135788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++ +|.+++.... ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++...... .
T Consensus        82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  155 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-R  155 (288)
T ss_dssp             CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccc-c
Confidence            975 9999886543 468999999999999999999999   899999999999999999999999999998664322 2


Q ss_pred             eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcC------Cc--ccccC
Q 035655          505 HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLG------QV--LDVVD  574 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~------~~--~~~~d  574 (670)
                      ......||+.|+|||++.+. .++.++|||||||+++||++|+.||...... ............      ..  ....+
T Consensus       156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T 1ob3_A          156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD  235 (288)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence            23345789999999998764 5899999999999999999999999764321 111111110000      00  00111


Q ss_pred             CCCC-------CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          575 PNLG-------SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       575 ~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      +...       ..+.......+.+++.+||+.||.+||+++|+++|-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  282 (288)
T 1ob3_A          236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA  282 (288)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred             cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence            1110       011122345678899999999999999999999853

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=5.7e-38  Score=325.32  Aligned_cols=237  Identities=25%  Similarity=0.497  Sum_probs=192.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      .++|+..+.||+|+||.||+|.+..                       ..+.+.+|+.++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            4679999999999999999997632                       0167889999999999999999999997665 


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce--EEecccCCCcEEecCCCc-----EEEE
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV--VIHRDVKSGNVLIDADMN-----ARLG  490 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDIkp~NILld~~~~-----~kL~  490 (670)
                       ++||||+++|+|.+++.+.. ..+++..++.++.|++.||+|||+   .+  |+||||||+|||++.++.     +||+
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~  171 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVA  171 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred             -eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence             69999999999999886654 469999999999999999999998   78  999999999999988776     9999


Q ss_pred             eecCceeccCCCcceeeccccCcCCCCccccc--cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC
Q 035655          491 DFGLARLFDHGKISHTTNVVGTIGYIAPELAR--TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ  568 (670)
Q Consensus       491 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~  568 (670)
                      |||+++....    ......||+.|+|||++.  ...++.++|||||||+++||++|+.||.................. 
T Consensus       172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-  246 (287)
T 4f0f_A          172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG-  246 (287)
T ss_dssp             CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC-
T ss_pred             CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC-
Confidence            9999974433    234467999999999984  456789999999999999999999999864433222222221111 


Q ss_pred             cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       569 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                          ..+.+    +......+.+++..||+.||.+||+++|+++.|+.
T Consensus       247 ----~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          247 ----LRPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             ----CCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             ----CCCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence                11111    22223567889999999999999999999999974

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.3e-39  Score=368.30  Aligned_cols=243  Identities=26%  Similarity=0.438  Sum_probs=199.4

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ...++|+..++||+|+||.||+|.+..              ..++|.+|+++|++++||||++++++|.+ +..++||||
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            345678899999999999999998654              24689999999999999999999999976 678999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++|+|.++|.......+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++........
T Consensus       343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  419 (535)
T 2h8h_A          343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  419 (535)
T ss_dssp             CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred             hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence            999999999976544569999999999999999999999   89999999999999999999999999999865432222


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      ......++..|+|||++....++.++|||||||++|||++ |+.||......  +..... ..+..         ...+.
T Consensus       420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i-~~~~~---------~~~~~  487 (535)
T 2h8h_A          420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQV-ERGYR---------MPCPP  487 (535)
T ss_dssp             TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHH-HTTCC---------CCCCT
T ss_pred             cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-HcCCC---------CCCCC
Confidence            2233457789999999999999999999999999999999 99999763321  111111 11110         11122


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...+.+.+++..||+.||.+||++++|++.|+..
T Consensus       488 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          488 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  521 (535)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            2345678899999999999999999999999865

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.3e-38  Score=341.34  Aligned_cols=257  Identities=21%  Similarity=0.265  Sum_probs=202.3

Q ss_pred             CCccchhhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccc-----cCceeee
Q 035655          349 PHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLR-----HKHLVNL  408 (670)
Q Consensus       349 ~~~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~-----H~nIv~l  408 (670)
                      ...+++++-....++|...++||+|+||.||+|....               ..+.+..|+.++++++     ||||+++
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            4456777777778999999999999999999998643               2356778999999996     9999999


Q ss_pred             eeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-----
Q 035655          409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-----  483 (670)
Q Consensus       409 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-----  483 (670)
                      ++++...+..++||||+ +++|.+++.......+++.++..++.||+.||+|||+   .+|+||||||+|||++.     
T Consensus       102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~  177 (360)
T 3llt_A          102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEK  177 (360)
T ss_dssp             EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCE
T ss_pred             cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccc
Confidence            99999999999999999 9999999987766679999999999999999999998   89999999999999975     


Q ss_pred             --------------------CCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHH
Q 035655          484 --------------------DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIA  543 (670)
Q Consensus       484 --------------------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~  543 (670)
                                          ++.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||+++||+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  253 (360)
T 3llt_A          178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY  253 (360)
T ss_dssp             EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred             cccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence                                789999999999865442    23457899999999999999999999999999999999


Q ss_pred             hCCCCCCCCcch-hHHHHHHHh-----------hcCCccccc--------CCCCCCc-------------ccHHHHHHHH
Q 035655          544 TGRRPIDSDHFI-LVDWVLEFQ-----------HLGQVLDVV--------DPNLGSS-------------YVVAEMELVL  590 (670)
Q Consensus       544 tG~~pf~~~~~~-~~~~~~~~~-----------~~~~~~~~~--------d~~l~~~-------------~~~~~~~~l~  590 (670)
                      +|+.||...... .........           .........        .+.....             +.....+.+.
T Consensus       254 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~  333 (360)
T 3llt_A          254 TGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFC  333 (360)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHH
T ss_pred             HCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHH
Confidence            999999763321 111111100           000000000        0000000             0001125677


Q ss_pred             HHHHhhccCCCCCCCCHHHHHHH
Q 035655          591 QLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       591 ~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +++..||+.||.+|||++|+++|
T Consensus       334 ~li~~~L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          334 DFLYSILQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHhcCChhhCCCHHHHhcC
Confidence            99999999999999999999875

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=9.8e-39  Score=342.35  Aligned_cols=235  Identities=23%  Similarity=0.279  Sum_probs=189.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||+||+++...                   ..+.+.+|..+++++ +||||+++++++.+.+.+++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            4689999999999999999997643                   224567899999988 69999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.+.  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       102 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~  176 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC  176 (353)
T ss_dssp             EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence            99999999999999664  359999999999999999999999   8999999999999999999999999999985433


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ...... .+.      ..    
T Consensus       177 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~~~~i~-~~~------~~----  242 (353)
T 3txo_A          177 NG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD--LFEAIL-NDE------VV----  242 (353)
T ss_dssp             ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH-HCC------CC----
T ss_pred             CC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH--HHHHHH-cCC------CC----
Confidence            22 23345689999999999998889999999999999999999999998643221  111111 111      11    


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHHh
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTM------RQVLRYL  614 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L  614 (670)
                      ++......+.+++..||+.||.+||++      +|+++|-
T Consensus       243 ~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp  282 (353)
T 3txo_A          243 YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP  282 (353)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred             CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence            111123557789999999999999998      8888754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.3e-38  Score=336.35  Aligned_cols=237  Identities=20%  Similarity=0.288  Sum_probs=188.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccC-------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR-------  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~-------  416 (670)
                      .++|+..+.||+|+||.||+|+...                 ..+.+.+|+++|++++||||++++++|.+..       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            4578999999999999999997642                 3467899999999999999999999986543       


Q ss_pred             --------------------------------------------------eeEEEEeccCCCCchhhcccCCc-cccCHH
Q 035655          417 --------------------------------------------------DLLLVYDYIPNGSLDSLLFDNEN-FVLSWE  445 (670)
Q Consensus       417 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~  445 (670)
                                                                        ..++||||+++|+|.+++..... ...++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              38999999999999999976532 346777


Q ss_pred             HHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc-----------ceeeccccCcC
Q 035655          446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-----------SHTTNVVGTIG  514 (670)
Q Consensus       446 ~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~-----------~~~~~~~gt~~  514 (670)
                      .++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......           .......||+.
T Consensus       165 ~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             HHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            899999999999999998   8999999999999999999999999999987765421           12234579999


Q ss_pred             CCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHH
Q 035655          515 YIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGL  594 (670)
Q Consensus       515 y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~  594 (670)
                      |+|||++.+..++.++|||||||+++||++|..|+...    .... .....        ... ..........+.+++.
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----~~~~-~~~~~--------~~~-~~~~~~~~~~~~~li~  307 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----VRII-TDVRN--------LKF-PLLFTQKYPQEHMMVQ  307 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----HHHH-HHHHT--------TCC-CHHHHHHCHHHHHHHH
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----HHHH-HHhhc--------cCC-CcccccCChhHHHHHH
Confidence            99999999999999999999999999999987774311    1100 10111        111 1222334456788999


Q ss_pred             hhccCCCCCCCCHHHHHHHh
Q 035655          595 LCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       595 ~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .||+.||.+||+++|++++-
T Consensus       308 ~~l~~~p~~Rps~~~~l~~~  327 (332)
T 3qd2_B          308 DMLSPSPTERPEATDIIENA  327 (332)
T ss_dssp             HHHCSSGGGSCCHHHHHHST
T ss_pred             HHccCCCCcCCCHHHHhhch
Confidence            99999999999999999853

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=3e-39  Score=340.58  Aligned_cols=252  Identities=23%  Similarity=0.403  Sum_probs=202.8

Q ss_pred             cchhhHHHhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeee
Q 035655          352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQ  409 (670)
Q Consensus       352 ~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~  409 (670)
                      +..++.....++|...+.||+|+||.||+|....                      ....+.+|++++++++||||++++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            4444555667889999999999999999986531                      234688999999999999999999


Q ss_pred             eeeeccCeeEEEEeccCCCCchhhcccCC--------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNE--------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       410 g~~~~~~~~~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                      +++.+.+..++||||+++|+|.+++....        ...+++..+++++.||+.||.|||+   .+|+||||||+|||+
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli  171 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMV  171 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEE
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEE
Confidence            99999999999999999999999996532        1357999999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHH
Q 035655          482 DADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW  559 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~  559 (670)
                      +.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||+++||++ |+.||.......  .
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~  249 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--V  249 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--H
T ss_pred             cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH--H
Confidence            9999999999999986543321 11223467889999999999999999999999999999999 899997643211  1


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                       ......+...     .    .+......+.+++..||+.||.+||++.|++++|+...
T Consensus       250 -~~~~~~~~~~-----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          250 -LRFVMEGGLL-----D----KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             -HHHHHTTCCC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             -HHHHHcCCcC-----C----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence             1111111111     1    11122356788999999999999999999999998653

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=3.6e-38  Score=333.08  Aligned_cols=232  Identities=24%  Similarity=0.311  Sum_probs=193.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||+++...                   ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            3578999999999999999997643                   234567899999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++....  .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        85 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~  159 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  159 (318)
T ss_dssp             ECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence            99999999999997643  58999999999999999999998   89999999999999999999999999999875432


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                          .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ....... ..      ..+    
T Consensus       160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i~~-~~------~~~----  222 (318)
T 1fot_A          160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK--TYEKILN-AE------LRF----  222 (318)
T ss_dssp             ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHH-CC------CCC----
T ss_pred             ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHHh-CC------CCC----
Confidence                334589999999999999999999999999999999999999997643211  1111111 11      111    


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                      +......+.+++..||+.||.+||     +++|+++|-
T Consensus       223 p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp  260 (318)
T 1fot_A          223 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP  260 (318)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence            111235677899999999999999     899999764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-38  Score=339.19  Aligned_cols=240  Identities=28%  Similarity=0.491  Sum_probs=189.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      ++|...+.||+|+||.||+|....                     ....+.+|+.++++++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            467778999999999999986531                     23468899999999999999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.... ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       124 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  199 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  199 (333)
T ss_dssp             EEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence            999999999999997643 469999999999999999999999   8999999999999999999999999999987654


Q ss_pred             CCcc--eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          501 GKIS--HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       501 ~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ....  ......+|+.|+|||++.+..++.++|||||||+++||++ |+.||.......  .... ...+.     .+..
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~-~~~~~-----~~~~  271 (333)
T 1mqb_A          200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKA-INDGF-----RLPT  271 (333)
T ss_dssp             -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHH-HHTTC-----CCCC
T ss_pred             ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHHH-HHCCC-----cCCC
Confidence            3211  1222356789999999999999999999999999999999 999997543211  1111 11111     0111


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                          +......+.+++.+||+.||.+||++.+++++|+..
T Consensus       272 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  307 (333)
T 1mqb_A          272 ----PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  307 (333)
T ss_dssp             ----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             ----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                112235678899999999999999999999999754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.1e-38  Score=339.53  Aligned_cols=234  Identities=23%  Similarity=0.354  Sum_probs=192.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|...+.||+|+||.||+|....                   ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            578999999999999999998633                   1246889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+ +|+|.+++...  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++.......
T Consensus        89 E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           89 EYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             CCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred             ECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence            999 78999988654  359999999999999999999999   899999999999999999999999999998665432


Q ss_pred             cceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                        ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......            .+...+.... ...
T Consensus       163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------------~~~~~i~~~~-~~~  227 (336)
T 3h4j_B          163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP------------NLFKKVNSCV-YVM  227 (336)
T ss_dssp             --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST------------TCBCCCCSSC-CCC
T ss_pred             --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH------------HHHHHHHcCC-CCC
Confidence              2234579999999999988776 68999999999999999999999753211            0111110000 011


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +......+.+++..||+.||.+|||++|++++-+-
T Consensus       228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~  262 (336)
T 3h4j_B          228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF  262 (336)
T ss_dssp             CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhh
Confidence            22223567789999999999999999999997553

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.4e-38  Score=343.96  Aligned_cols=238  Identities=25%  Similarity=0.307  Sum_probs=192.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..++||+|+||+||+++...                   ..+.+.+|..++.++ +||||+++++++.+.+.+++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            4679999999999999999997643                   123477899999887 89999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.+.  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       131 V~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~  205 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  205 (396)
T ss_dssp             EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence            99999999999999754  359999999999999999999999   8999999999999999999999999999985332


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc------hhHHHHHHHhhcCCcccccC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF------ILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~------~~~~~~~~~~~~~~~~~~~d  574 (670)
                      .. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....      ...+..........      
T Consensus       206 ~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------  278 (396)
T 4dc2_A          206 PG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------  278 (396)
T ss_dssp             TT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC------
T ss_pred             CC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc------
Confidence            22 234456899999999999999999999999999999999999999964211      11111111111111      


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHHh
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTM------RQVLRYL  614 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L  614 (670)
                      ..+    +......+.+++..||+.||.+||++      +|+++|-
T Consensus       279 ~~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp  320 (396)
T 4dc2_A          279 IRI----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP  320 (396)
T ss_dssp             CCC----CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred             cCC----CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence            111    11223567789999999999999984      7887764

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3e-38  Score=326.19  Aligned_cols=234  Identities=24%  Similarity=0.385  Sum_probs=191.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||++....                   ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            4679999999999999999997643                   134678999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++...  ..+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++......
T Consensus        88 ~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~  162 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  162 (279)
T ss_dssp             ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred             EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence            9999999999999654  358999999999999999999998   89999999999999999999999999998654332


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                         ......||+.|+|||.+.+..++.++||||||++++||++|+.||........  .......       ....    
T Consensus       163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~-------~~~~----  226 (279)
T 3fdn_A          163 ---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--YKRISRV-------EFTF----  226 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHHHT-------CCCC----
T ss_pred             ---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH--HHHHHhC-------CCCC----
Confidence               23445789999999999999999999999999999999999999986432211  1111110       1111    


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +......+.+++..||+.||.+||+++|+++|-+
T Consensus       227 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~  260 (279)
T 3fdn_A          227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW  260 (279)
T ss_dssp             CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred             CCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence            1112355778999999999999999999999754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-37  Score=330.65  Aligned_cols=252  Identities=24%  Similarity=0.335  Sum_probs=192.0

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc-----------hHHHHHHHHHHHhcc--ccCceeeeeeeeecc----CeeEEE
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT-----------RMREFAAEIESLGRL--RHKHLVNLQGWCKRK----RDLLLV  421 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~L~~l--~H~nIv~l~g~~~~~----~~~~lV  421 (670)
                      ...++|+..++||+|+||.||+|....           ....+..|.+++..+  +||||+++++++...    ...++|
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv  113 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI  113 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred             ccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence            445789999999999999999998653           234555666666654  899999999999877    689999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccc-----cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW-----EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      |||+++|+|.+++...   .+++..++.++.|++.||+|||+.+     +++|+||||||+|||++.++.+||+|||+++
T Consensus       114 ~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~  190 (337)
T 3mdy_A          114 TDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  190 (337)
T ss_dssp             ECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence            9999999999999543   5899999999999999999999821     1299999999999999999999999999998


Q ss_pred             eccCCCcce---eeccccCcCCCCccccccCCCCcc------chhHHHHHHHHHHHhC----------CCCCCCCcch--
Q 035655          497 LFDHGKISH---TTNVVGTIGYIAPELARTGKASCS------TDVFAYGVLLLEIATG----------RRPIDSDHFI--  555 (670)
Q Consensus       497 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~t~k------sDV~S~Gvvl~el~tG----------~~pf~~~~~~--  555 (670)
                      .........   .....||+.|+|||++.+.....+      +|||||||++|||++|          +.||......  
T Consensus       191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~  270 (337)
T 3mdy_A          191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP  270 (337)
T ss_dssp             ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC
Confidence            665433221   124579999999999987766654      9999999999999999          6666542111  


Q ss_pred             hHHHHHHHhhcCCcccccCCCCCCcc-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          556 LVDWVLEFQHLGQVLDVVDPNLGSSY-VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       556 ~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...........    ....+.+...+ .......+.+++.+||+.||.+||++.|++++|+..
T Consensus       271 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  329 (337)
T 3mdy_A          271 SYEDMREIVCI----KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM  329 (337)
T ss_dssp             CHHHHHHHHTT----SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             chhhhHHHHhh----hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence            11111111111    11222222222 235677899999999999999999999999999753

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.2e-38  Score=342.67  Aligned_cols=248  Identities=18%  Similarity=0.184  Sum_probs=190.9

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch-----------------H---------------HHHHHHHHHHhccccCceee
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR-----------------M---------------REFAAEIESLGRLRHKHLVN  407 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~-----------------~---------------~~f~~Ei~~L~~l~H~nIv~  407 (670)
                      ..++|+..++||+|+||.||+|.+..+                 .               ..+..|+..+++++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            456899999999999999999966321                 1               12334556677788999999


Q ss_pred             eeeeeecc----CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec-
Q 035655          408 LQGWCKRK----RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID-  482 (670)
Q Consensus       408 l~g~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld-  482 (670)
                      +++++...    ...++||||+ +++|.+++.... ..+++.+++.++.||+.||+|||+   .+|+||||||+|||++ 
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNY  187 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEES
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEec
Confidence            99998765    4589999999 999999997643 469999999999999999999999   8999999999999999 


Q ss_pred             -CCCcEEEEeecCceeccCCCcc------eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC--c
Q 035655          483 -ADMNARLGDFGLARLFDHGKIS------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD--H  553 (670)
Q Consensus       483 -~~~~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~--~  553 (670)
                       .++.+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||...  .
T Consensus       188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~  267 (364)
T 3op5_A          188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD  267 (364)
T ss_dssp             SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence             8899999999999876543211      113346999999999999999999999999999999999999999752  2


Q ss_pred             chhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          554 FILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       554 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .......... ....+...+++.+..   ......+.+++..||+.+|.+||+++++++.|+.
T Consensus       268 ~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~  326 (364)
T 3op5_A          268 PKYVRDSKIR-YRENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ  326 (364)
T ss_dssp             HHHHHHHHHH-HHHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHH-hhhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            2222111111 111222222222111   1113567889999999999999999999999865

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=6.6e-38  Score=338.47  Aligned_cols=235  Identities=23%  Similarity=0.335  Sum_probs=186.2

Q ss_pred             cccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCCC
Q 035655          365 KQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNG  428 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~g  428 (670)
                      ...+.||+|+||.||+|....                ..+.+.+|+++|++++||||++++++|.+.+..++||||+++|
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            346789999999999997532                3467889999999999999999999999999999999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe--cCCCcEEEEeecCceeccCCCccee
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI--DADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl--d~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +|.+++.... ..+++..++.++.||+.||.|||+   .+|+||||||+|||+  +.++.+||+|||+++......  ..
T Consensus       172 ~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~  245 (373)
T 2x4f_A          172 ELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KL  245 (373)
T ss_dssp             EEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BC
T ss_pred             cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cc
Confidence            9999986543 469999999999999999999999   899999999999999  667899999999998765433  22


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ....||+.|+|||++.+..++.++|||||||+++||++|+.||.......  ........ ..      .+.........
T Consensus       246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--~~~~i~~~-~~------~~~~~~~~~~~  316 (373)
T 2x4f_A          246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE--TLNNILAC-RW------DLEDEEFQDIS  316 (373)
T ss_dssp             CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHHT-CC------CSCSGGGTTSC
T ss_pred             ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhc-cC------CCChhhhccCC
Confidence            34479999999999998899999999999999999999999997643221  11111111 00      01111111223


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ..+.+++..||+.||.+||+++|++++-
T Consensus       317 ~~~~~li~~~L~~dp~~Rps~~e~l~hp  344 (373)
T 2x4f_A          317 EEAKEFISKLLIKEKSWRISASEALKHP  344 (373)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence            5678899999999999999999999853

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=5.6e-39  Score=339.83  Aligned_cols=253  Identities=25%  Similarity=0.347  Sum_probs=197.6

Q ss_pred             hcCccccceEeeeCceeEEEeecc----c----------------hHHHHHHHHHHHhccccCceeeeeeeee--ccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP----T----------------RMREFAAEIESLGRLRHKHLVNLQGWCK--RKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~----~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~--~~~~~  418 (670)
                      .++|+..+.||+|+||.||++...    .                ..+.+.+|++++++++||||+++++++.  +....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            367899999999999999999731    1                2356899999999999999999999886  45678


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             EEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceec
Confidence            99999999999999997643 369999999999999999999999   89999999999999999999999999999877


Q ss_pred             cCCCcc--eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHH---HHHhhcCCccccc
Q 035655          499 DHGKIS--HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWV---LEFQHLGQVLDVV  573 (670)
Q Consensus       499 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~---~~~~~~~~~~~~~  573 (670)
                      ......  ......||..|+|||++.+..++.++|||||||+++||++|+.||...........   ............+
T Consensus       178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (327)
T 3lxl_A          178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL  257 (327)
T ss_dssp             CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred             ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence            554322  22334688889999999988899999999999999999999999865221110000   0000000111111


Q ss_pred             CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       574 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ........+......+.+++..||+.||.+||+++|++++|+..
T Consensus       258 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  301 (327)
T 3lxl_A          258 EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML  301 (327)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred             hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            11111222233346688999999999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1.2e-37  Score=322.04  Aligned_cols=238  Identities=23%  Similarity=0.331  Sum_probs=194.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .++|+..+.||+|+||.||+|....                  ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            5789999999999999999997643                  2356789999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc---EEEEeecCceecc
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLARLFD  499 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~---~kL~DFGla~~~~  499 (670)
                      ||+++++|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.   +||+|||++....
T Consensus        85 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            999999999988654  358999999999999999999999   89999999999999987665   9999999998765


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ...  ......||+.|+|||++.+..++.++||||||++++||++|+.||........  .... ..+.. ....+.   
T Consensus       160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~-~~~~~-~~~~~~---  230 (284)
T 3kk8_A          160 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL--YAQI-KAGAY-DYPSPE---  230 (284)
T ss_dssp             SSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH-HHTCC-CCCTTT---
T ss_pred             cCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH--HHHH-Hhccc-cCCchh---
Confidence            433  22345799999999999999999999999999999999999999976432211  1111 11111 111111   


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                        .......+.+++..||+.||.+||+++|++++-
T Consensus       231 --~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~  263 (284)
T 3kk8_A          231 --WDTVTPEAKSLIDSMLTVNPKKRITADQALKVP  263 (284)
T ss_dssp             --TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred             --hcccCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence              111235578899999999999999999999853

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.9e-38  Score=331.32  Aligned_cols=249  Identities=25%  Similarity=0.334  Sum_probs=192.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch---------------------HHHHHHHHHHHhccc---cCceeeeeeeeecc
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR---------------------MREFAAEIESLGRLR---HKHLVNLQGWCKRK  415 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~---------------------~~~f~~Ei~~L~~l~---H~nIv~l~g~~~~~  415 (670)
                      .+++|+..++||+|+||.||+|+....                     ...+.+|+.++++++   ||||++++++|...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            367899999999999999999985331                     246778888888775   99999999999765


Q ss_pred             C-----eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEE
Q 035655          416 R-----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLG  490 (670)
Q Consensus       416 ~-----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~  490 (670)
                      .     ..++||||++ |+|.+++.......+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEEe
Confidence            4     5899999997 699999987766669999999999999999999999   899999999999999999999999


Q ss_pred             eecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCC-
Q 035655          491 DFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQ-  568 (670)
Q Consensus       491 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~-  568 (670)
                      |||+++......  ......||+.|+|||++.+..++.++|||||||+++||++|+.||...... ............. 
T Consensus       163 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  240 (308)
T 3g33_A          163 DFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE  240 (308)
T ss_dssp             SCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             eCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            999998654332  234568999999999999999999999999999999999999999764322 1111111110000 


Q ss_pred             --cc-------cccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          569 --VL-------DVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       569 --~~-------~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                        ..       ....+...   ........+.+.+++..||+.||.+|||+.|+++|-
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~  298 (308)
T 3g33_A          241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS  298 (308)
T ss_dssp             TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred             hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCc
Confidence              00       00000000   001112346678899999999999999999999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.6e-38  Score=327.94  Aligned_cols=245  Identities=24%  Similarity=0.336  Sum_probs=195.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeee--ccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCK--RKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~--~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||++....                  ..+.+.+|++++++++||||+++++++.  .....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            4678999999999999999997642                  2356889999999999999999999874  4678999


Q ss_pred             EEeccCCCCchhhcccCC--ccccCHHHHHHHHHHHHHHhhhccccccce-----EEecccCCCcEEecCCCcEEEEeec
Q 035655          421 VYDYIPNGSLDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQV-----VIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-----ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      ||||+++++|.+++....  ...+++..++.++.|++.||.|||+   .+     ++||||||+||+++.++.+||+|||
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            999999999999997532  3459999999999999999999998   66     9999999999999999999999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccccc
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV  573 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~  573 (670)
                      +++...... .......||+.|+|||.+.+..++.++||||||++++||++|+.||........  . .....+..    
T Consensus       162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~-~~i~~~~~----  233 (279)
T 2w5a_A          162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL--A-GKIREGKF----  233 (279)
T ss_dssp             HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--H-HHHHHTCC----
T ss_pred             hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH--H-HHHhhccc----
Confidence            998665432 122345789999999999998999999999999999999999999986432211  1 11111111    


Q ss_pred             CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCCCC
Q 035655          574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP  621 (670)
Q Consensus       574 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  621 (670)
                       +.+..    .....+.+++.+||+.||.+||+++|++++++..++.+
T Consensus       234 -~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  276 (279)
T 2w5a_A          234 -RRIPY----RYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH  276 (279)
T ss_dssp             -CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred             -ccCCc----ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence             11111    22356788999999999999999999999887665544

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=3.8e-38  Score=337.37  Aligned_cols=233  Identities=24%  Similarity=0.242  Sum_probs=194.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||+++...                   ..+.+.+|+++|++++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            3579999999999999999998643                   234677899999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++.+.  ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       120 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~  194 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             EECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence            9999999999999754  358999999999999999999998   89999999999999999999999999999876442


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                          .....||+.|+|||++.+..++.++|||||||+++||++|+.||.......  .... ...+.      ..+..  
T Consensus       195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~-i~~~~------~~~p~--  259 (350)
T 1rdq_E          195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYEK-IVSGK------VRFPS--  259 (350)
T ss_dssp             ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-HHHCC------CCCCT--
T ss_pred             ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH--HHHH-HHcCC------CCCCC--
Confidence                234579999999999999999999999999999999999999998643221  1111 11111      11111  


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPT-----MRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~  615 (670)
                        .....+.+++..||+.||.+||+     ++|+++|-.
T Consensus       260 --~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~  296 (350)
T 1rdq_E          260 --HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             --TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred             --CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence              22356788999999999999998     899988643

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=9.1e-39  Score=337.15  Aligned_cols=247  Identities=27%  Similarity=0.398  Sum_probs=192.6

Q ss_pred             ccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeecc--CeeEE
Q 035655          364 FKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RDLLL  420 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~~~l  420 (670)
                      |+..++||+|+||.||++....                     ..+.+.+|++++++++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            4889999999999998875311                     245688999999999999999999999874  67899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++...   .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~  186 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  186 (318)
T ss_dssp             EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred             EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence            99999999999999654   48999999999999999999999   8999999999999999999999999999987765


Q ss_pred             CCcc--eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHH---HHHhhcCCcccccCC
Q 035655          501 GKIS--HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWV---LEFQHLGQVLDVVDP  575 (670)
Q Consensus       501 ~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~---~~~~~~~~~~~~~d~  575 (670)
                      ....  ......+|..|+|||++.+..++.++|||||||+++||++|+.||...........   ..........+.+..
T Consensus       187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (318)
T 3lxp_A          187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER  266 (318)
T ss_dssp             TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred             cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence            4322  22345688899999999998999999999999999999999999875221110000   000000011111111


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......+......+.+++.+||+.||.+||+++|+++.|+.
T Consensus       267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  307 (318)
T 3lxp_A          267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT  307 (318)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence            11112223334678899999999999999999999999874

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=4.8e-38  Score=342.74  Aligned_cols=244  Identities=24%  Similarity=0.293  Sum_probs=185.2

Q ss_pred             hcCcccc-ceEeeeCceeEEEeeccc-----------hHHHHHHHHHHHhc-cccCceeeeeeeeec----cCeeEEEEe
Q 035655          361 TKGFKQS-EVIGTGGFGEVYKGVLPT-----------RMREFAAEIESLGR-LRHKHLVNLQGWCKR----KRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~-~~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~L~~-l~H~nIv~l~g~~~~----~~~~~lV~E  423 (670)
                      .++|... +.||+|+||+||++....           ....+.+|+.++.+ .+||||+++++++..    ...+++|||
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E  139 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME  139 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence            3456665 689999999999998754           23567889998754 589999999999875    567899999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC---CCcEEEEeecCceeccC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDH  500 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~---~~~~kL~DFGla~~~~~  500 (670)
                      |+++|+|.+++.......+++.++..++.||+.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++....
T Consensus       140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  216 (400)
T 1nxk_A          140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS  216 (400)
T ss_dssp             CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred             eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence            9999999999987665679999999999999999999998   89999999999999998   78999999999986543


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHHhhcCCcccccCCCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ..  ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..........+.. ....+.   
T Consensus       217 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~-~~~~~~---  290 (400)
T 1nxk_A          217 HN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY-EFPNPE---  290 (400)
T ss_dssp             ------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCC-CCCTTT---
T ss_pred             CC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcc-cCCCcc---
Confidence            22  2345678999999999999999999999999999999999999997632211 0001111111111 001111   


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                        .......+.+++..||+.||.+||++.|+++|-+
T Consensus       291 --~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~  324 (400)
T 1nxk_A          291 --WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW  324 (400)
T ss_dssp             --TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             --cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence              1122356788999999999999999999999754

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=4.9e-38  Score=335.50  Aligned_cols=248  Identities=17%  Similarity=0.187  Sum_probs=188.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------------------hHHHHHHHHHHHhccccCceeeeee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------------------RMREFAAEIESLGRLRHKHLVNLQG  410 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------------------~~~~f~~Ei~~L~~l~H~nIv~l~g  410 (670)
                      .++|...+.||+|+||.||+|....                              ..+.+.+|+..++.++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            3579999999999999999998642                              0123567888899999999999999


Q ss_pred             eeec----cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-
Q 035655          411 WCKR----KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-  485 (670)
Q Consensus       411 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-  485 (670)
                      ++..    ....++||||+ +++|.+++....  .+++.+++.++.||+.||+|||+   .+|+||||||+|||++.++ 
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~  189 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNP  189 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSST
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCC
Confidence            9987    67899999999 999999997654  69999999999999999999999   8999999999999999887 


Q ss_pred             -cEEEEeecCceeccCCCc------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC--cchh
Q 035655          486 -NARLGDFGLARLFDHGKI------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD--HFIL  556 (670)
Q Consensus       486 -~~kL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~--~~~~  556 (670)
                       .+||+|||+++.......      .......||+.|+|||++.+..++.++|||||||++|||++|+.||...  ....
T Consensus       190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~  269 (345)
T 2v62_A          190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA  269 (345)
T ss_dssp             TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred             CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence             999999999987643221      1113457999999999999999999999999999999999999999642  1111


Q ss_pred             HHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          557 VDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       557 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      ......... ............   .......+.+++..||+.||.+||++++|++.|+...
T Consensus       270 ~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          270 VQTAKTNLL-DELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHHH-HTTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHHhhc-ccccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            111111111 011000000000   0012356888999999999999999999999998764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.4e-39  Score=345.07  Aligned_cols=238  Identities=26%  Similarity=0.453  Sum_probs=182.3

Q ss_pred             CccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeec-cCeeEEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR-KRDLLLV  421 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-~~~~~lV  421 (670)
                      .|...+.||+|+||.||+|....                    ..+.|.+|+.++++++||||++++++|.+ .+..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            46677899999999999987521                    24678999999999999999999998754 4678999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++.... ..+++.+++.++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       170 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~  245 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  245 (373)
T ss_dssp             EECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccc
Confidence            99999999999997543 468999999999999999999999   89999999999999999999999999999866443


Q ss_pred             Ccc---eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCC
Q 035655          502 KIS---HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       502 ~~~---~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ...   ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .....    ..+..  ...+ 
T Consensus       246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~----~~~~~--~~~p-  318 (373)
T 3c1x_A          246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----LQGRR--LLQP-  318 (373)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH----HTTCC--CCCC-
T ss_pred             ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH----HcCCC--CCCC-
Confidence            211   2233467889999999999999999999999999999999 67777653221 11111    11111  0111 


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                            ......+.+++..||+.||.+||+++|+++.|+..
T Consensus       319 ------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i  353 (373)
T 3c1x_A          319 ------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  353 (373)
T ss_dssp             ------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                  11235678899999999999999999999999753

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.6e-38  Score=335.32  Aligned_cols=249  Identities=24%  Similarity=0.345  Sum_probs=179.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..+.||+|+||.||+|....                 ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            4678999999999999999997643                 23578899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCC----ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          424 YIPNGSLDSLLFDNE----NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      |++ |+|.+++....    ...+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 69999986532    2358999999999999999999998   899999999999999999999999999998765


Q ss_pred             CCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc--CCc------
Q 035655          500 HGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL--GQV------  569 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~--~~~------  569 (670)
                      ... .......||+.|+|||++.+ ..++.++|||||||+++||++|+.||...... ...........  ...      
T Consensus       160 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  238 (317)
T 2pmi_A          160 IPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK  238 (317)
T ss_dssp             SCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred             CCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence            432 12234578999999999876 46899999999999999999999999864322 11111111000  000      


Q ss_pred             ccccCCCCC----Cc--------ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          570 LDVVDPNLG----SS--------YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       570 ~~~~d~~l~----~~--------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .....+...    ..        ........+.+++..||+.||.+|||++|++++-
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp  295 (317)
T 2pmi_A          239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHP  295 (317)
T ss_dssp             CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred             hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCCh
Confidence            000000000    00        0011235688999999999999999999999853

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=6.2e-39  Score=334.88  Aligned_cols=252  Identities=22%  Similarity=0.374  Sum_probs=194.8

Q ss_pred             hcCccccceEeeeCceeEEEeecc----c-----------------hHHHHHHHHHHHhccccCceeeeeeeeecc--Ce
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP----T-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK--RD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~----~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~--~~  417 (670)
                      .+.|+..+.||+|+||.||+++..    .                 ..+.+.+|++++++++||||+++++++...  ..
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence            345888999999999999999731    1                 236788999999999999999999999876  66


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccccc
Confidence            899999999999999996543 359999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCc--ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHH---HhhcCCcccc
Q 035655          498 FDHGKI--SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE---FQHLGQVLDV  572 (670)
Q Consensus       498 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~---~~~~~~~~~~  572 (670)
                      ......  .......||..|+|||.+.+..++.++|||||||+++||++|+.|+.............   ..........
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT  255 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence            765442  22334578889999999999899999999999999999999999865311000000000   0000000001


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +........+......+.+++..||+.||.+||+++|+++.|+.
T Consensus       256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            11111111222334668899999999999999999999999863

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-38  Score=329.65  Aligned_cols=239  Identities=24%  Similarity=0.368  Sum_probs=193.2

Q ss_pred             hcCccccc-eEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSE-VIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~-~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|...+ .||+|+||.||+|....                   ..+.+.+|++++++++||||+++++++ +.+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            34566666 89999999999997421                   346788999999999999999999999 5567999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++++|.+++... ...+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++....
T Consensus        87 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             EEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            99999999999999654 3469999999999999999999999   8999999999999999999999999999987754


Q ss_pred             CCcce--eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          501 GKISH--TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       501 ~~~~~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      .....  .....+|+.|+|||++.+..++.++|||||||+++||++ |+.||........  . .....+.     .+. 
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~-~~i~~~~-----~~~-  233 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--M-AFIEQGK-----RME-  233 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH--H-HHHHTTC-----CCC-
T ss_pred             CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH--H-HHHhcCC-----cCC-
Confidence            33221  223457889999999988889999999999999999998 9999976432211  1 1111111     111 


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                         .+......+.+++..||+.||.+||++.+++++|+.
T Consensus       234 ---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  269 (287)
T 1u59_A          234 ---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  269 (287)
T ss_dssp             ---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence               122233568889999999999999999999999974

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.6e-38  Score=337.43  Aligned_cols=242  Identities=25%  Similarity=0.388  Sum_probs=197.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK  415 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~  415 (670)
                      .++|...+.||+|+||.||+|....                        ..+.+.+|+++++++ +||||++++++|.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            4689999999999999999997421                        235688999999999 899999999999999


Q ss_pred             CeeEEEEeccCCCCchhhcccCCc--------------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNEN--------------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                      +..++||||+++|+|.+++.....              ..+++.+++.++.||+.||.|||+   .+|+||||||+|||+
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence            999999999999999999976432              348999999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHH
Q 035655          482 DADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW  559 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~  559 (670)
                      +.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||+++||++ |+.||.......  .
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~  268 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--L  268 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--H
Confidence            99999999999999876553322 2233467889999999998889999999999999999999 999997643221  1


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ..... .+.     .+..    +......+.+++..||+.||.+||+++|+++.|+..
T Consensus       269 ~~~~~-~~~-----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l  316 (334)
T 2pvf_A          269 FKLLK-EGH-----RMDK----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  316 (334)
T ss_dssp             HHHHH-HTC-----CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHh-cCC-----CCCC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            11111 111     1111    112235678899999999999999999999999754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.2e-38  Score=337.22  Aligned_cols=238  Identities=30%  Similarity=0.455  Sum_probs=192.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ++|+..+.||+|+||.||++....                   ..+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            578899999999999999997532                   235688999999999 899999999999999999999


Q ss_pred             EeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcE
Q 035655          422 YDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA  487 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~  487 (670)
                      |||+++|+|.+++....              ...+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCeE
Confidence            99999999999997643              2468999999999999999999999   899999999999999999999


Q ss_pred             EEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhc
Q 035655          488 RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHL  566 (670)
Q Consensus       488 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~  566 (670)
                      ||+|||+++.....  .......+++.|+|||++.+..++.++|||||||+++||++ |+.||......  ..... ...
T Consensus       182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~-~~~  256 (327)
T 1fvr_A          182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEK-LPQ  256 (327)
T ss_dssp             EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH-GGG
T ss_pred             EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--HHHHH-hhc
Confidence            99999999743221  12233467889999999998889999999999999999998 99999764321  11111 111


Q ss_pred             CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       567 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +     ..+..    +......+.+++.+||+.||.+||+++|++++|+.
T Consensus       257 ~-----~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  297 (327)
T 1fvr_A          257 G-----YRLEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR  297 (327)
T ss_dssp             T-----CCCCC----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             C-----CCCCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            1     11111    11223567889999999999999999999999874

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.2e-37  Score=321.28  Aligned_cols=236  Identities=25%  Similarity=0.329  Sum_probs=192.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|+..+.||+|+||.||+|....                ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            4679999999999999999997643                346789999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe---cCCCcEEEEeecCceeccCC
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl---d~~~~~kL~DFGla~~~~~~  501 (670)
                      +++++|.+++...  ..+++.+++.++.|++.||.|||+   .+++||||||+|||+   +.++.+||+|||++......
T Consensus        88 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~  162 (277)
T 3f3z_A           88 CTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG  162 (277)
T ss_dssp             CCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred             cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence            9999999998654  358999999999999999999998   899999999999999   88899999999999876543


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      .  ......||+.|+|||.+.+ .++.++||||||++++||++|+.||........  ..... .+..      ......
T Consensus       163 ~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~-~~~~------~~~~~~  230 (277)
T 3f3z_A          163 K--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV--MLKIR-EGTF------TFPEKD  230 (277)
T ss_dssp             S--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH-HCCC------CCCHHH
T ss_pred             c--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH--HHHHH-hCCC------CCCchh
Confidence            3  2334579999999998865 489999999999999999999999976432211  11111 1110      000000


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .......+.+++..||+.||.+||++.|++++
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          231 WLNVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             hhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            01123567889999999999999999999875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1e-38  Score=340.46  Aligned_cols=239  Identities=21%  Similarity=0.328  Sum_probs=187.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhcccc--CceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRH--KHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H--~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||++....                 ..+.+.+|+.+|++++|  |||+++++++...+..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            4568999999999999999997643                 23678899999999987  9999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      || +.+++|.+++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++ ++.+||+|||+++.....
T Consensus        88 ~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  160 (343)
T ss_dssp             EC-CCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred             Ee-CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence            99 5688999999764  368999999999999999999999   8999999999999997 678999999999876543


Q ss_pred             Ccc-eeeccccCcCCCCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCc
Q 035655          502 KIS-HTTNVVGTIGYIAPELART-----------GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV  569 (670)
Q Consensus       502 ~~~-~~~~~~gt~~y~aPE~~~~-----------~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~  569 (670)
                      ... ......||+.|+|||++.+           ..++.++|||||||+++||++|+.||...........         
T Consensus       161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---------  231 (343)
T 3dbq_A          161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH---------  231 (343)
T ss_dssp             ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH---------
T ss_pred             cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHH---------
Confidence            322 2345689999999999865           6789999999999999999999999975322211111         


Q ss_pred             ccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          570 LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       570 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       ..+++.....++......+.+++..||+.||.+||++.|++++.+-
T Consensus       232 -~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~  277 (343)
T 3dbq_A          232 -AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  277 (343)
T ss_dssp             -HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             -HHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence             1111111112222223567889999999999999999999998653

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=5.2e-38  Score=329.78  Aligned_cols=251  Identities=24%  Similarity=0.344  Sum_probs=200.0

Q ss_pred             cchhhHHHhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeee
Q 035655          352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNL  408 (670)
Q Consensus       352 ~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l  408 (670)
                      +...+.....++|+..+.||+|+||.||+|....                      ..+.+.+|+.+++++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            3344444557889999999999999999996311                      235688999999999 78999999


Q ss_pred             eeeeeccC-eeEEEEeccCCCCchhhcccCCc--------------cccCHHHHHHHHHHHHHHhhhccccccceEEecc
Q 035655          409 QGWCKRKR-DLLLVYDYIPNGSLDSLLFDNEN--------------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRD  473 (670)
Q Consensus       409 ~g~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrD  473 (670)
                      +++|...+ ..++|+||+++|+|.+++.....              ..+++..++.++.|++.||.|||+   .+|+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccccc
Confidence            99987754 58999999999999999976542              228999999999999999999999   8999999


Q ss_pred             cCCCcEEecCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCC
Q 035655          474 VKSGNVLIDADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDS  551 (670)
Q Consensus       474 Ikp~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~  551 (670)
                      |||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||+++||++ |+.||..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999999986654332 22344578899999999999999999999999999999998 9999976


Q ss_pred             CcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          552 DHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       552 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......  .......+..     ......    ....+.+++..||+.||.+||++.|++++|+.
T Consensus       254 ~~~~~~--~~~~~~~~~~-----~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~  307 (316)
T 2xir_A          254 VKIDEE--FCRRLKEGTR-----MRAPDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  307 (316)
T ss_dssp             CCCSHH--HHHHHHHTCC-----CCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cchhHH--HHHHhccCcc-----CCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            332111  1111111111     111111    23457889999999999999999999999974

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2.1e-38  Score=333.14  Aligned_cols=240  Identities=23%  Similarity=0.347  Sum_probs=184.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe----
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD----  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~----  417 (670)
                      .++|+..+.||+|+||.||++....                   ....+.+|+.++++++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            4679999999999999999998532                   12468899999999999999999999876543    


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++||||+++++|.+++...  ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             cEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence            49999999999999999654  358999999999999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCc--ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          498 FDHGKI--SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       498 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      ......  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........+  ..........    
T Consensus       166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~--~~~~~~~~~~----  239 (311)
T 3ork_A          166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY--QHVREDPIPP----  239 (311)
T ss_dssp             ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHCCCCCH----
T ss_pred             ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHhcCCCCCc----
Confidence            654322  22334579999999999999999999999999999999999999998654322211  1111111000    


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                         ..........+.+++..||+.||.+||+..+++++-
T Consensus       240 ---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~  275 (311)
T 3ork_A          240 ---SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD  275 (311)
T ss_dssp             ---HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred             ---ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHH
Confidence               000111235678899999999999999877776643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.4e-38  Score=329.92  Aligned_cols=239  Identities=26%  Similarity=0.445  Sum_probs=189.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeee-ccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCK-RKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~-~~~~~~l  420 (670)
                      .+|+..++||+|+||.||+|....                    ..+.+.+|+.++++++||||++++++|. .++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            458888999999999999997432                    2356889999999999999999999865 4567899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             EEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred             EEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccccccc
Confidence            999999999999997543 468999999999999999999999   8999999999999999999999999999986644


Q ss_pred             CCc---ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          501 GKI---SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       501 ~~~---~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ...   .......+|+.|+|||.+.+..++.++|||||||+++||++ |..||........  ...... +.  ....+ 
T Consensus       181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~--~~~~~~-~~--~~~~~-  254 (298)
T 3f66_A          181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVYLLQ-GR--RLLQP-  254 (298)
T ss_dssp             GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH--HHHHHT-TC--CCCCC-
T ss_pred             cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH--HHHHhc-CC--CCCCC-
Confidence            321   12234567889999999999999999999999999999999 5556654222111  111111 11  00111 


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                            ......+.+++..||+.||.+||+++|+++.|+.
T Consensus       255 ------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~  288 (298)
T 3f66_A          255 ------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA  288 (298)
T ss_dssp             ------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                  1122467889999999999999999999999975

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=6.6e-38  Score=325.22  Aligned_cols=237  Identities=26%  Similarity=0.361  Sum_probs=187.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|...++||+|+||.||++....                 ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            3578899999999999999987532                 24678999999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe---cCCCcEEEEeecCceec
Q 035655          424 YIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLF  498 (670)
Q Consensus       424 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl---d~~~~~kL~DFGla~~~  498 (670)
                      |+++|+|.+++...  ....+++..++.++.|++.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++..
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            99999999998653  23569999999999999999999998   899999999999999   45678999999999865


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ....  ......||+.|+|||.+. +.++.++|||||||+++||++|+.||..........  .............    
T Consensus       178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~----  248 (285)
T 3is5_A          178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ--KATYKEPNYAVEC----  248 (285)
T ss_dssp             -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHCCCCCCC------
T ss_pred             CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHh--hhccCCccccccc----
Confidence            4432  234457999999999875 568999999999999999999999998644222111  1111111000000    


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..    ....+.+++..||+.||.+||+++|++++
T Consensus       249 ~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          249 RP----LTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             Cc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            01    12457789999999999999999999975

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.3e-38  Score=328.85  Aligned_cols=248  Identities=26%  Similarity=0.276  Sum_probs=189.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|+..++||+|+||.||+|....                  ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            578999999999999999997643                  13567899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++++|.+++...  ..+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||++....... 
T Consensus        83 ~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  156 (311)
T 4agu_A           83 YCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-  156 (311)
T ss_dssp             CCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             eCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence            99999999988654  358999999999999999999999   899999999999999999999999999998765432 


Q ss_pred             ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-HHHHHH-----------hhcCCc-
Q 035655          504 SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-DWVLEF-----------QHLGQV-  569 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~~~~~~-----------~~~~~~-  569 (670)
                      .......||+.|+|||++.+ ..++.++|||||||+++||++|+.||........ ......           ...... 
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (311)
T 4agu_A          157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF  236 (311)
T ss_dssp             ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred             cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence            22334578999999999876 5689999999999999999999999976432211 111110           000000 


Q ss_pred             --ccccCCCCCCcc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          570 --LDVVDPNLGSSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       570 --~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                        ....++......   .......+.+++..||+.||.+|||++|+++|-.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  287 (311)
T 4agu_A          237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY  287 (311)
T ss_dssp             TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGG
T ss_pred             ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChH
Confidence              011111110000   0122356788999999999999999999998743

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=1.2e-38  Score=328.95  Aligned_cols=237  Identities=29%  Similarity=0.390  Sum_probs=188.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCceeeeeeeeecc-CeeEEEEeccCC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-RDLLLVYDYIPN  427 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-~~~~lV~E~~~~  427 (670)
                      .++|+..+.||+|+||.||++....            ..+.+.+|++++++++||||+++++++.+. +..++|+||+++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   99 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK   99 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred             hhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCC
Confidence            4678999999999999999997643            356789999999999999999999997654 578999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      ++|.+++.......+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++......    ..
T Consensus       100 ~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----~~  172 (278)
T 1byg_A          100 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QD  172 (278)
T ss_dssp             EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred             CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccccc----cc
Confidence            999999976554458999999999999999999999   89999999999999999999999999999755432    22


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...+++.|+|||.+.+..++.++||||||++++||++ |+.||.......  ..... ..+     ..+.    .+....
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~-~~~-----~~~~----~~~~~~  240 (278)
T 1byg_A          173 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRV-EKG-----YKMD----APDGCP  240 (278)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHH-TTT-----CCCC----CCTTCC
T ss_pred             CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH-hcC-----CCCC----CcccCC
Confidence            3367889999999999999999999999999999998 999997643211  11111 111     1111    112233


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+++..||+.||.+||++.|+++.|+.
T Consensus       241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  270 (278)
T 1byg_A          241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEH  270 (278)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence            567889999999999999999999999874

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.3e-38  Score=338.42  Aligned_cols=236  Identities=23%  Similarity=0.350  Sum_probs=193.0

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCee
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~  418 (670)
                      ...++|...+.||+|+||.||+++...                   ..+.+..|..++.++ +||||+++++++.+.+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            346789999999999999999998643                   124567899999887 899999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++||||+++|+|.+++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        94 ~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            9999999999999999654  358999999999999999999999   89999999999999999999999999999854


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  .... ...      .+.+.
T Consensus       169 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i-~~~------~~~~p  238 (345)
T 1xjd_A          169 MLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL--FHSI-RMD------NPFYP  238 (345)
T ss_dssp             CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH-HHC------CCCCC
T ss_pred             ccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH--HHHH-HhC------CCCCC
Confidence            3322 224456899999999999999999999999999999999999999986432211  1111 111      11111


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHH-HHHHH
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMR-QVLRY  613 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~  613 (670)
                      .    .....+.+++..||+.||.+||++. ++++|
T Consensus       239 ~----~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h  270 (345)
T 1xjd_A          239 R----WLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  270 (345)
T ss_dssp             T----TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             c----ccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence            1    1235677899999999999999998 77754

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.8e-37  Score=327.61  Aligned_cols=238  Identities=23%  Similarity=0.354  Sum_probs=195.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|+..+.||+|+||.||++....                      ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            4578999999999999999997642                      145789999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC----cEEEEeecC
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM----NARLGDFGL  494 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~----~~kL~DFGl  494 (670)
                      ++||||+++++|.+++...  ..+++..++.++.|++.||.|||+   .+|+||||||+|||++.++    .+||+|||+
T Consensus        91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence            9999999999999999654  368999999999999999999999   8999999999999999888    799999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ++......  ......||+.|+|||++.+..++.++|||||||+++||++|+.||......  +....... .      .
T Consensus       166 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~-~------~  234 (321)
T 2a2a_A          166 AHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANITS-V------S  234 (321)
T ss_dssp             CEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHT-T------C
T ss_pred             ceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHh-c------c
Confidence            98765432  223457999999999999999999999999999999999999999764321  11111111 0      0


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ..............+.+++..||+.||.+||+++|++++-
T Consensus       235 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp  274 (321)
T 2a2a_A          235 YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP  274 (321)
T ss_dssp             CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred             cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence            0111111112235678899999999999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=6.6e-38  Score=334.89  Aligned_cols=238  Identities=25%  Similarity=0.307  Sum_probs=192.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+++...                   ..+.+.+|+.+++++ +||||+++++++.+.+..++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            3578999999999999999997643                   124577899999988 89999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++...  ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        88 v~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred             EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence            99999999999999654  358999999999999999999999   8999999999999999999999999999985432


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc------hhHHHHHHHhhcCCcccccC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF------ILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~------~~~~~~~~~~~~~~~~~~~d  574 (670)
                      .. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....      ..............      
T Consensus       163 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~------  235 (345)
T 3a8x_A          163 PG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------  235 (345)
T ss_dssp             TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC------
T ss_pred             CC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC------
Confidence            22 234456899999999999999999999999999999999999999964211      11111111111111      


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCH------HHHHHHh
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTM------RQVLRYL  614 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L  614 (670)
                      ..+    +......+.+++..||+.||.+||++      +|+++|-
T Consensus       236 ~~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp  277 (345)
T 3a8x_A          236 IRI----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP  277 (345)
T ss_dssp             CCC----CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSG
T ss_pred             CCC----CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCC
Confidence            111    11223567789999999999999995      7888764

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=8.4e-38  Score=335.03  Aligned_cols=235  Identities=22%  Similarity=0.267  Sum_probs=193.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||+||++....                   ..+.+..|..++..+ +||||+++++++.+.+.+++
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            4689999999999999999997643                   234577899999988 79999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++...  ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        99 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  173 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  173 (353)
T ss_dssp             EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence            99999999999999654  358999999999999999999999   8999999999999999999999999999985432


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ...... ...      ..+   
T Consensus       174 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~~~~i~-~~~------~~~---  240 (353)
T 2i0e_A          174 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LFQSIM-EHN------VAY---  240 (353)
T ss_dssp             TT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH-HCC------CCC---
T ss_pred             CC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH--HHHHHH-hCC------CCC---
Confidence            22 23345689999999999999999999999999999999999999998643221  111111 111      111   


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHHh
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPT-----MRQVLRYL  614 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L  614 (670)
                       +......+.+++..||+.||.+||+     ++++++|-
T Consensus       241 -p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~  278 (353)
T 2i0e_A          241 -PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA  278 (353)
T ss_dssp             -CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred             -CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence             1122356788999999999999995     68888764

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=6.7e-38  Score=336.91  Aligned_cols=239  Identities=19%  Similarity=0.229  Sum_probs=183.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|+..+.||+|+||.||+++...               ..+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            4679999999999999999998643               2367889999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc--EEEEeecCceeccCCCc
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN--ARLGDFGLARLFDHGKI  503 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~--~kL~DFGla~~~~~~~~  503 (670)
                      ++|+|.+++...  ..+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.  +||+|||+++...... 
T Consensus        99 ~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~-  172 (361)
T 3uc3_A           99 SGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-  172 (361)
T ss_dssp             CSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred             CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence            999999999654  359999999999999999999998   89999999999999988776  9999999997443222 


Q ss_pred             ceeeccccCcCCCCccccccCCCCcc-chhHHHHHHHHHHHhCCCCCCCCcc--hhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCS-TDVFAYGVLLLEIATGRRPIDSDHF--ILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~k-sDV~S~Gvvl~el~tG~~pf~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                       ......||+.|+|||++.+..++.+ +|||||||++|||++|+.||.....  ........... ...      ..  .
T Consensus       173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~-~~~------~~--~  242 (361)
T 3uc3_A          173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILS-VKY------SI--P  242 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHT-TCC------CC--C
T ss_pred             -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhc-CCC------CC--C
Confidence             2334579999999999988887665 8999999999999999999976321  11111111111 110      00  0


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ........+.+++.+||+.||.+|||+.|+++|-+
T Consensus       243 ~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~  277 (361)
T 3uc3_A          243 DDIRISPECCHLISRIFVADPATRISIPEIKTHSW  277 (361)
T ss_dssp             TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred             CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcc
Confidence            00112256788999999999999999999999744

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.2e-37  Score=327.18  Aligned_cols=242  Identities=24%  Similarity=0.304  Sum_probs=186.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      -++|+..+.||+|+||.||++....                   ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            4679999999999999999997542                   125688999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +||+++++|.+++...  ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++......
T Consensus       113 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             EECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             EEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            9999999999999654  358999999999999999999999   89999999999999999999999999999876554


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      .........||+.|+|||.+.+..++.++||||||++++||++|+.||..........  .............       
T Consensus       188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~-------  258 (309)
T 2h34_A          188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGA--HINQAIPRPSTVR-------  258 (309)
T ss_dssp             ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHH--HHHSCCCCGGGTS-------
T ss_pred             ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHH--HhccCCCCccccC-------
Confidence            4333445679999999999999999999999999999999999999998654321111  1111111111111       


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhcCC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARP-TMRQVLRYLNGD  617 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~  617 (670)
                       ......+.+++..||+.||.+|| +++++++.|+..
T Consensus       259 -~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~  294 (309)
T 2h34_A          259 -PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA  294 (309)
T ss_dssp             -TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred             -CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence             12234577899999999999999 999999999865

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.4e-37  Score=330.35  Aligned_cols=251  Identities=26%  Similarity=0.364  Sum_probs=198.1

Q ss_pred             HHhhcCccccceEeeeCceeEEEeeccc-----------hHHHHHHHHHHHhc--cccCceeeeeeeeeccC----eeEE
Q 035655          358 YTATKGFKQSEVIGTGGFGEVYKGVLPT-----------RMREFAAEIESLGR--LRHKHLVNLQGWCKRKR----DLLL  420 (670)
Q Consensus       358 ~~~t~~f~~~~~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~L~~--l~H~nIv~l~g~~~~~~----~~~l  420 (670)
                      ....++|...+.||+|+||.||+|....           ..+.+.+|++++..  ++||||+++++++....    ..++
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l  117 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL  117 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEE
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEE
Confidence            3456789999999999999999997643           34677889999887  78999999999998775    7899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccc-----cceEEecccCCCcEEecCCCcEEEEeecCc
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW-----EQVVIHRDVKSGNVLIDADMNARLGDFGLA  495 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDIkp~NILld~~~~~kL~DFGla  495 (670)
                      ||||+++|+|.+++.+.   .+++.+++.++.|++.||.|||...     +.+|+||||||+|||++.++.+||+|||++
T Consensus       118 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~  194 (342)
T 1b6c_B          118 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  194 (342)
T ss_dssp             EECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence            99999999999999643   5899999999999999999999210     189999999999999999999999999999


Q ss_pred             eeccCCCcc---eeeccccCcCCCCccccccCC------CCccchhHHHHHHHHHHHhC----------CCCCCCCcc--
Q 035655          496 RLFDHGKIS---HTTNVVGTIGYIAPELARTGK------ASCSTDVFAYGVLLLEIATG----------RRPIDSDHF--  554 (670)
Q Consensus       496 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~t~ksDV~S~Gvvl~el~tG----------~~pf~~~~~--  554 (670)
                      +........   ......||+.|+|||++.+..      ++.++|||||||++|||++|          +.||.....  
T Consensus       195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~  274 (342)
T 1b6c_B          195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  274 (342)
T ss_dssp             EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence            877654422   223457999999999987652      34689999999999999999          778865211  


Q ss_pred             -hhHHHHHHHhhcCCcccccCCCCCCcc-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          555 -ILVDWVLEFQHLGQVLDVVDPNLGSSY-VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       555 -~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       ....+. .....    ....+.+...+ .......+.+++.+||+.||.+||+++|++++|+.
T Consensus       275 ~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~  333 (342)
T 1b6c_B          275 PSVEEMR-KVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  333 (342)
T ss_dssp             CCHHHHH-HHHTT----SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             ccHHHHH-HHHHH----HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence             111111 11111    11223322222 23567789999999999999999999999999974

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.5e-37  Score=323.26  Aligned_cols=243  Identities=18%  Similarity=0.271  Sum_probs=193.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeee-eccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWC-KRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~-~~~~~~~lV~E~~  425 (670)
                      .++|+..+.||+|+||.||+|+...              ..+.+.+|+.++++++|++++..++++ .+.+..++||||+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            5789999999999999999998532              235789999999999998877766665 5667789999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe---cCCCcEEEEeecCceeccCCC
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl---d~~~~~kL~DFGla~~~~~~~  502 (670)
                       +++|.+++.... ..+++.+++.++.|++.||+|||+   .+|+||||||+|||+   +.++.+||+|||+++......
T Consensus        88 -~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (296)
T 3uzp_A           88 -GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             -CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence             999999997543 369999999999999999999999   899999999999999   588999999999998766543


Q ss_pred             cc------eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc----hhHHHHHHHhhcCCcccc
Q 035655          503 IS------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF----ILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       503 ~~------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~----~~~~~~~~~~~~~~~~~~  572 (670)
                      ..      ......||+.|+|||.+.+..++.++|||||||+++||++|+.||.....    .............. ...
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~  241 (296)
T 3uzp_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-IEV  241 (296)
T ss_dssp             TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-HHH
T ss_pred             cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-hHH
Confidence            21      12445899999999999999999999999999999999999999975221    11111111111100 011


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ..+        .....+.+++..||+.||.+||+++++++.|+..
T Consensus       242 ~~~--------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          242 LCK--------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HTT--------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             HHh--------hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence            111        1125678899999999999999999999999754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=5.8e-38  Score=323.70  Aligned_cols=236  Identities=24%  Similarity=0.401  Sum_probs=173.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||+|....                   ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            3578999999999999999997532                   125688999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +||+++++|.+++.... ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++......
T Consensus        90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~  165 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP  165 (278)
T ss_dssp             EECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             EecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence            99999999999997643 468999999999999999999999   89999999999999999999999999999876533


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      .. ......||+.|+|||.+.+..++.++||||||++++||++|+.||........  . .     .. ...+...    
T Consensus       166 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~-~-----~~-~~~~~~~----  231 (278)
T 3cok_A          166 HE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--L-N-----KV-VLADYEM----  231 (278)
T ss_dssp             ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------C-CSSCCCC----
T ss_pred             CC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--H-H-----HH-hhcccCC----
Confidence            21 22345789999999999988899999999999999999999999976332100  0 0     00 0001111    


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      +......+.+++.+||+.||.+||++++++++-
T Consensus       232 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~  264 (278)
T 3cok_A          232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHP  264 (278)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTST
T ss_pred             ccccCHHHHHHHHHHcccCHhhCCCHHHHhcCc
Confidence            112235677899999999999999999999753

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.8e-38  Score=334.85  Aligned_cols=237  Identities=21%  Similarity=0.235  Sum_probs=172.8

Q ss_pred             cceEeeeCceeEEEeeccc-------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEeccCCCCchh
Q 035655          367 SEVIGTGGFGEVYKGVLPT-------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDS  432 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~-------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~  432 (670)
                      .+.||+|+||.||++....             ....+.+|+.++++++ ||||+++++++.+....++||||+++|+|.+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   95 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE   95 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence            4789999999999998753             3467889999999997 9999999999999999999999999999999


Q ss_pred             hcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC---cEEEEeecCceeccCCCcceeecc
Q 035655          433 LLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM---NARLGDFGLARLFDHGKISHTTNV  509 (670)
Q Consensus       433 ~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~---~~kL~DFGla~~~~~~~~~~~~~~  509 (670)
                      ++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++   .+||+|||+++...... ......
T Consensus        96 ~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~  169 (325)
T 3kn6_A           96 RIKKK--KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTP  169 (325)
T ss_dssp             HHHHC--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred             HHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cccccc
Confidence            99765  469999999999999999999998   8999999999999997765   89999999998665432 223445


Q ss_pred             ccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchh----HHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL----VDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       510 ~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~----~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .||+.|+|||++.+..++.++|||||||+++||++|+.||.......    ..........+.      ...........
T Consensus       170 ~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~~~~~~  243 (325)
T 3kn6_A          170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD------FSFEGEAWKNV  243 (325)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC------CCCCSHHHHTS
T ss_pred             CCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC------CCCCcccccCC
Confidence            78999999999999999999999999999999999999997632210    011111111111      11112222233


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...+.+++..||+.||.+||+++|++++-+
T Consensus       244 s~~~~~li~~~L~~dP~~Rpt~~ell~h~w  273 (325)
T 3kn6_A          244 SQEAKDLIQGLLTVDPNKRLKMSGLRYNEW  273 (325)
T ss_dssp             CHHHHHHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred             CHHHHHHHHHHCCCChhHCCCHHHHhcChh
Confidence            567889999999999999999999998754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.5e-38  Score=327.45  Aligned_cols=239  Identities=23%  Similarity=0.298  Sum_probs=190.0

Q ss_pred             CccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee-EEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL-LLV  421 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~-~lV  421 (670)
                      .|...++||+|+||.||+|....                    ..+.|.+|+.++++++||||+++++++.+.+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            45667899999999999997421                    236788999999999999999999999876655 999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +||+.+|+|.+++.... ..+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.+||+|||+++.....
T Consensus       102 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  177 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDR  177 (298)
T ss_dssp             ECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred             EecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence            99999999999997643 468999999999999999999999   89999999999999999999999999999865432


Q ss_pred             C---cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCC-CCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          502 K---ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID-SDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       502 ~---~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~-~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      .   ........+|+.|+|||.+.+..++.++|||||||+++||++|..|+. .......  ... ......     .. 
T Consensus       178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~--~~~-~~~~~~-----~~-  248 (298)
T 3pls_A          178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL--THF-LAQGRR-----LP-  248 (298)
T ss_dssp             GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH--HHH-HHTTCC-----CC-
T ss_pred             cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH--HHH-hhcCCC-----CC-
Confidence            2   122234578899999999999999999999999999999999666543 3222111  111 111110     11 


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                         .+......+.+++..||+.||.+|||++++++.|+..
T Consensus       249 ---~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          249 ---QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence               1111235678899999999999999999999999753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.1e-37  Score=324.00  Aligned_cols=244  Identities=18%  Similarity=0.270  Sum_probs=191.5

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeee-eccCeeEEEEec
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWC-KRKRDLLLVYDY  424 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~-~~~~~~~lV~E~  424 (670)
                      ..++|+..+.||+|+||.||+|....              ..+.+.+|++++++++|++++..++++ ...+..++||||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            45789999999999999999998533              234688999999999998877777766 566788999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe---cCCCcEEEEeecCceeccCC
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl---d~~~~~kL~DFGla~~~~~~  501 (670)
                      + +++|.+++.... ..+++.+++.++.||+.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++.....
T Consensus        87 ~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  161 (296)
T 4hgt_A           87 L-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             C-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             c-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence            9 999999997543 369999999999999999999999   899999999999999   78999999999999877554


Q ss_pred             Cc------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc----hhHHHHHHHhhcCCccc
Q 035655          502 KI------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF----ILVDWVLEFQHLGQVLD  571 (670)
Q Consensus       502 ~~------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~----~~~~~~~~~~~~~~~~~  571 (670)
                      ..      .......||+.|+|||.+.+..++.++|||||||+++||++|+.||.....    .............. ..
T Consensus       162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~  240 (296)
T 4hgt_A          162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-IE  240 (296)
T ss_dssp             TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-HH
T ss_pred             ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-hh
Confidence            32      122345899999999999999999999999999999999999999975221    11111111111000 01


Q ss_pred             ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          572 VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       572 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...+        .....+.+++..||+.||.+||+++++++.|+..
T Consensus       241 ~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          241 VLCK--------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHTT--------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             hhhc--------cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            1111        1135678899999999999999999999999754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.8e-37  Score=328.69  Aligned_cols=250  Identities=20%  Similarity=0.328  Sum_probs=197.8

Q ss_pred             cchhhHHHhhcCcccc-ceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccc-cCceeeeeee
Q 035655          352 FRYSDLYTATKGFKQS-EVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLR-HKHLVNLQGW  411 (670)
Q Consensus       352 ~~~~~l~~~t~~f~~~-~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~  411 (670)
                      ..++......+.|... +.||+|+||.||+|....                  ....+.+|+.++++++ ||||++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~   97 (327)
T 3lm5_A           18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV   97 (327)
T ss_dssp             CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            3445555556677776 889999999999997643                  2467889999999995 6999999999


Q ss_pred             eeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC---CCcEE
Q 035655          412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNAR  488 (670)
Q Consensus       412 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~---~~~~k  488 (670)
                      +.+.+..++||||+++|+|.+++.......+++.+++.++.|++.||+|||+   .+|+||||||+|||++.   ++.+|
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~k  174 (327)
T 3lm5_A           98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIK  174 (327)
T ss_dssp             EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEE
T ss_pred             EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEE
Confidence            9999999999999999999999977656679999999999999999999999   89999999999999998   78999


Q ss_pred             EEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC
Q 035655          489 LGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ  568 (670)
Q Consensus       489 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~  568 (670)
                      |+|||+++......  ......||+.|+|||++.+..++.++|||||||+++||++|+.||.........  ....... 
T Consensus       175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~--~~i~~~~-  249 (327)
T 3lm5_A          175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY--LNISQVN-  249 (327)
T ss_dssp             ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHTC-
T ss_pred             EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH--HHHHhcc-
Confidence            99999998765432  223457999999999999999999999999999999999999999764322111  1111100 


Q ss_pred             cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       569 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                            ..............+.+++..||+.||.+||+++|++++-.
T Consensus       250 ------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~  290 (327)
T 3lm5_A          250 ------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSW  290 (327)
T ss_dssp             ------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred             ------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence                  01111111223356788999999999999999999998754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.6e-38  Score=332.29  Aligned_cols=249  Identities=22%  Similarity=0.351  Sum_probs=190.1

Q ss_pred             hhhHHHhhcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeee
Q 035655          354 YSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWC  412 (670)
Q Consensus       354 ~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~  412 (670)
                      +.++....++|...+.||+|+||.||+|....                     ..+.+.+|+.++++++||||+++++++
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            34444556789999999999999999986532                     235688999999999999999999999


Q ss_pred             eccC-----eeEEEEeccCCCCchhhccc----CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC
Q 035655          413 KRKR-----DLLLVYDYIPNGSLDSLLFD----NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA  483 (670)
Q Consensus       413 ~~~~-----~~~lV~E~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~  483 (670)
                      .+.+     ..++|+||+++|+|.+++..    .....+++.+++.++.||++||.|||+   .+|+||||||+|||++.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~  182 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRD  182 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECT
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcC
Confidence            8754     35999999999999999843    233569999999999999999999999   89999999999999999


Q ss_pred             CCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHH
Q 035655          484 DMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVL  561 (670)
Q Consensus       484 ~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~  561 (670)
                      ++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||+++||++ |+.||........  ..
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~  260 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YD  260 (313)
T ss_dssp             TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HH
T ss_pred             CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HH
Confidence            99999999999986644322 22234467889999999999999999999999999999999 8999976432211  11


Q ss_pred             HHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          562 EFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       562 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .. ..+.     .+    ..+......+.+++..||+.||.+||++.+++++|+..
T Consensus       261 ~~-~~~~-----~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l  306 (313)
T 3brb_A          261 YL-LHGH-----RL----KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL  306 (313)
T ss_dssp             HH-HTTC-----CC----CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HH-HcCC-----CC----CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            11 1111     01    11122335678899999999999999999999999753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.4e-37  Score=318.29  Aligned_cols=240  Identities=23%  Similarity=0.306  Sum_probs=194.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..+.||+|+||.||++....                 ..+.+.+|+.++++++||||+++++++.+.+..++|+|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            4678999999999999999997642                 23678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........
T Consensus        86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  160 (276)
T 2yex_A           86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (276)
T ss_dssp             CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             ecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence            99999999999654  458999999999999999999998   8999999999999999999999999999986643321


Q ss_pred             -ceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          504 -SHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       504 -~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       .......||+.|+|||.+.+..+ +.++||||||++++||++|+.||.........+... ......   .      ..
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~---~------~~  230 (276)
T 2yex_A          161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTY---L------NP  230 (276)
T ss_dssp             ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHH-HTTCTT---S------TT
T ss_pred             hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHh-hhcccc---c------Cc
Confidence             22334578999999999987665 779999999999999999999997643221111111 110000   0      01


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .......+.+++..||+.||.+||+++|++++-.
T Consensus       231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~  264 (276)
T 2yex_A          231 WKKIDSAPLALLHKILVENPSARITIPDIKKDRW  264 (276)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred             hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCcc
Confidence            1122356778999999999999999999998654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=6.8e-38  Score=335.20  Aligned_cols=235  Identities=29%  Similarity=0.412  Sum_probs=190.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .+.|+..+.||+|+||.||+|+...                   ..+.+.+|++++++++||||++++++|...+..++|
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            3458889999999999999997532                   125688999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||++ |+|.+++.... ..+++.++..++.|+++||.|||+   .+|+||||||+|||++.++.+||+|||+++.... 
T Consensus       133 ~e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-  206 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-  206 (348)
T ss_dssp             EECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred             EecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-
Confidence            99997 68888875433 469999999999999999999999   8999999999999999999999999999976543 


Q ss_pred             CcceeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          502 KISHTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                          .....||+.|+|||++.   .+.++.++|||||||+++||++|+.||......  ..........      .+.+.
T Consensus       207 ----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--~~~~~~~~~~------~~~~~  274 (348)
T 1u5q_A          207 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQNE------SPALQ  274 (348)
T ss_dssp             ----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSC------CCCCC
T ss_pred             ----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhcC------CCCCC
Confidence                23457999999999884   567899999999999999999999999764321  1111111111      11111


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .   ....+.+.+++..||+.||.+||++++++++..-
T Consensus       275 ~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~  309 (348)
T 1u5q_A          275 S---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  309 (348)
T ss_dssp             C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred             C---CCCCHHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence            1   1122457789999999999999999999987653

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=5.3e-38  Score=324.35  Aligned_cols=239  Identities=23%  Similarity=0.405  Sum_probs=196.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCceeeeeeeeec--------------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--------------  414 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--------------  414 (670)
                      .++|+..+.||+|+||.||++....            ....+.+|++++++++||||+++++++..              
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   89 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR   89 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence            4578999999999999999998753            23568899999999999999999998854              


Q ss_pred             --cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          415 --KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       415 --~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                        ....++||||+++|+|.+++.......+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+||
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Df  166 (284)
T 2a19_B           90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDF  166 (284)
T ss_dssp             CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCC
T ss_pred             cCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCEEECcc
Confidence              4558999999999999999977655679999999999999999999998   89999999999999999999999999


Q ss_pred             cCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccc
Q 035655          493 GLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       493 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~  572 (670)
                      |++.......  ......||+.|+|||++.+..++.++||||||++++||++|..|+...    ...... ....     
T Consensus       167 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~-~~~~-----  234 (284)
T 2a19_B          167 GLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTD-LRDG-----  234 (284)
T ss_dssp             TTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HHHHHH-HHTT-----
T ss_pred             hhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----HHHHHH-hhcc-----
Confidence            9998765432  223457999999999999999999999999999999999999886421    111111 1111     


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCCCC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLP  621 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~p  621 (670)
                         .+...++    ..+.+++..||+.||.+||++.|++++|+....-+
T Consensus       235 ---~~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          235 ---IISDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             ---CCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred             ---cccccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence               1111222    44678899999999999999999999998654433

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=3e-38  Score=337.18  Aligned_cols=244  Identities=24%  Similarity=0.322  Sum_probs=194.0

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch------------HHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccC
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~------------~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      ..++|+..+.||+|+||.||++.....            ...+.+|++++.++ +||||+++++++.+.+..++||||++
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   99 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK   99 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence            356799999999999999999987542            23456899999988 79999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC----CcEEEEeecCceeccCCC
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD----MNARLGDFGLARLFDHGK  502 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~----~~~kL~DFGla~~~~~~~  502 (670)
                      +|+|.+++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||+..+    +.+||+|||+++......
T Consensus       100 gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A          100 GGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             SCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            99999999654  358999999999999999999999   899999999999998443    359999999998765433


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                       .......||+.|+|||++.+..++.++|||||||++|||++|+.||.................+..      .+...+.
T Consensus       175 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~------~~~~~~~  247 (342)
T 2qr7_A          175 -GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF------SLSGGYW  247 (342)
T ss_dssp             -CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC------CCCSTTT
T ss_pred             -CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc------ccCcccc
Confidence             223445799999999999888889999999999999999999999975322111111111111111      1111122


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ......+.+++..||+.||.+||++.|+++|-+
T Consensus       248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~  280 (342)
T 2qr7_A          248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW  280 (342)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence            223456788999999999999999999998643

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=8.6e-39  Score=342.22  Aligned_cols=248  Identities=18%  Similarity=0.189  Sum_probs=196.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccch-------------------HHHHHHHHHHHhccccCceee--------------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR-------------------MREFAAEIESLGRLRHKHLVN--------------  407 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~-------------------~~~f~~Ei~~L~~l~H~nIv~--------------  407 (670)
                      .++|...+.||+|+||.||+|.....                   .+.+.+|++++++++||||++              
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~  120 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP  120 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence            36799999999999999999987531                   245889999999999999998              


Q ss_pred             -eeeeeec-cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          408 -LQGWCKR-KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       408 -l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                       +++++.. ....++||||+ +++|.+++.......+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++
T Consensus       121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEEETTE
T ss_pred             chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEEcCCC
Confidence             5667665 67899999999 9999999987655679999999999999999999999   8999999999999999998


Q ss_pred             --cEEEEeecCceeccCCCcc------eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch--
Q 035655          486 --NARLGDFGLARLFDHGKIS------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI--  555 (670)
Q Consensus       486 --~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--  555 (670)
                        .+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  276 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE  276 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH
Confidence              9999999999866432211      123458999999999999999999999999999999999999999763211  


Q ss_pred             -hHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          556 -LVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       556 -~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                       .........  .......++...   .......+.+++..||+.||.+||+++++++.|+..
T Consensus       277 ~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          277 DIMKQKQKFV--DKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             HHHHHHHHHH--HSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHhcc--CChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence             111111111  111111111111   011235678899999999999999999999999754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=2.3e-38  Score=329.39  Aligned_cols=238  Identities=25%  Similarity=0.368  Sum_probs=192.8

Q ss_pred             hcCccccc-eEeeeCceeEEEeecc--c------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSE-VIGTGGFGEVYKGVLP--T------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~-~lG~G~fg~Vykg~~~--~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      .++|...+ .||+|+||.||+|.+.  .                  ..+++.+|++++++++||||+++++++ +.+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            45677777 9999999999999431  1                  246788999999999999999999999 567789


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +|+||+++++|.+++...  ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++...
T Consensus        94 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR  168 (291)
T ss_dssp             EEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence            999999999999999764  358999999999999999999999   899999999999999999999999999998775


Q ss_pred             CCCcce--eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          500 HGKISH--TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       500 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ......  .....+|+.|+|||.+.+..++.++||||||++++||++ |+.||........   ......+.     .+.
T Consensus       169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~~~~~~~-----~~~  240 (291)
T 1xbb_A          169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV---TAMLEKGE-----RMG  240 (291)
T ss_dssp             TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---HHHHHTTC-----CCC
T ss_pred             cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH---HHHHHcCC-----CCC
Confidence            543222  222356789999999998889999999999999999999 9999986433211   11111111     111


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                          .+......+.+++..||+.||.+||++.++++.|+.
T Consensus       241 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  276 (291)
T 1xbb_A          241 ----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  276 (291)
T ss_dssp             ----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence                112233568889999999999999999999999874

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=8.2e-38  Score=331.46  Aligned_cols=236  Identities=23%  Similarity=0.301  Sum_probs=185.7

Q ss_pred             hcCccccceEeeeCceeEEEeecc----c-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP----T-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~----~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      .++|+..+.||+|+||.||+++..    .                   ....+.+|+.+|++++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            467999999999999999998752    1                   12346789999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++||||+++|+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             EEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence            99999999999999999654  358999999999999999999999   8999999999999999999999999999975


Q ss_pred             ccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          498 FDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ....... ..      ..+
T Consensus       171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~-~~------~~~  240 (327)
T 3a62_A          171 SIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK--TIDKILK-CK------LNL  240 (327)
T ss_dssp             ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHH-TC------CCC
T ss_pred             cccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHh-CC------CCC
Confidence            43322 22344579999999999999899999999999999999999999998643221  1111111 11      111


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhc
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYLN  615 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~  615 (670)
                          +......+.+++..||+.||.+||     ++.|+++|-.
T Consensus       241 ----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~  279 (327)
T 3a62_A          241 ----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF  279 (327)
T ss_dssp             ----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred             ----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence                112235678899999999999999     8889998644

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=4.6e-38  Score=330.82  Aligned_cols=247  Identities=22%  Similarity=0.217  Sum_probs=191.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeee----ccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCK----RKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~----~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||++....                ..+.+.+|++++++++||||+++++++.    .....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            4679999999999999999997532                3467889999999999999999999987    3457899


Q ss_pred             EEeccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          421 VYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      |+||+++|+|.+++...  ....+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++...
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            99999999999999752  33569999999999999999999999   89999999999999999999999999998765


Q ss_pred             cCCCcc--------eeeccccCcCCCCccccccCC---CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcC
Q 035655          499 DHGKIS--------HTTNVVGTIGYIAPELARTGK---ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG  567 (670)
Q Consensus       499 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~  567 (670)
                      ......        ......||+.|+|||++.+..   ++.++|||||||+++||++|+.||............. ... 
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~-  262 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA-VQN-  262 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH-HHC-
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH-hhc-
Confidence            321110        012346799999999987554   6889999999999999999999985310000000000 000 


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCCC
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELL  620 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  620 (670)
                      ..    ..    .........+.+++..||+.||.+||++++++++|+...+.
T Consensus       263 ~~----~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          263 QL----SI----PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             C------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             cC----CC----CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence            00    00    01112235678899999999999999999999999877543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.7e-38  Score=361.74  Aligned_cols=238  Identities=24%  Similarity=0.366  Sum_probs=188.8

Q ss_pred             cCccccc-eEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSE-VIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~-~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      +++...+ .||+|+||.||+|.+..                   ..++|.+|+++|++++||||++++++|.. +..++|
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv  413 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV  413 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence            4444445 79999999999986531                   35789999999999999999999999976 569999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++... ...+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       414 ~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             EECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             EEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            9999999999999754 3469999999999999999999999   89999999999999999999999999999876443


Q ss_pred             Ccce--eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          502 KISH--TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       502 ~~~~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ....  .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||........   ......+..         
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~---~~~i~~~~~---------  557 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV---MAFIEQGKR---------  557 (613)
T ss_dssp             ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH---HHHHHTTCC---------
T ss_pred             CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---HHHHHcCCC---------
Confidence            2211  122346789999999999999999999999999999998 9999986432211   111111111         


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ...+......+.+++..||+.||.+||++++|++.|+.
T Consensus       558 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  595 (613)
T 2ozo_A          558 MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  595 (613)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            11222334678889999999999999999999999874

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.5e-38  Score=348.64  Aligned_cols=237  Identities=22%  Similarity=0.258  Sum_probs=186.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..++||+|+||.||++....                   ....+.+|+.++++++||||++++++|...+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            3578999999999999999987543                   124567899999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++...  ..+++..+..++.||+.||+|||+  +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus       227 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  302 (446)
T 4ejn_A          227 MEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD  302 (446)
T ss_dssp             ECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred             EeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence            9999999999999654  368999999999999999999996  268999999999999999999999999999854332


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      . .......||+.|+|||++.+..++.++|||||||+++||++|+.||........  ..... ...      ..+    
T Consensus       303 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i~-~~~------~~~----  368 (446)
T 4ejn_A          303 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--FELIL-MEE------IRF----  368 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH-HCC------CCC----
T ss_pred             C-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH--HHHHH-hCC------CCC----
Confidence            2 233456899999999999999999999999999999999999999976432211  11111 111      111    


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~  615 (670)
                      +......+.+++..||+.||.+||     +++|+++|-.
T Consensus       369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~  407 (446)
T 4ejn_A          369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF  407 (446)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred             CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcc
Confidence            111235678899999999999999     9999998643

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=2.1e-37  Score=324.85  Aligned_cols=244  Identities=25%  Similarity=0.389  Sum_probs=185.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||+|....                   ....+.+|+.++++++||||+++++++...+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            3578999999999999999997532                   235688999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          422 YDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      |||+++++|.+++...  ....+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++...
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            9999999999998642  23468999999999999999999999   899999999999999999999999999998654


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ... .......|++.|+|||++.+..++.++||||||++++||++|+.||................ ...     +... 
T Consensus       188 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~-----~~~~-  259 (310)
T 2wqm_A          188 SKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-CDY-----PPLP-  259 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT-TCS-----CCCC-
T ss_pred             CCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc-ccC-----CCCc-
Confidence            432 22234578999999999999999999999999999999999999997644332222222211 111     1111 


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                        .......+.+++..||+.||.+||+++++++.|+..
T Consensus       260 --~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l  295 (310)
T 2wqm_A          260 --SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM  295 (310)
T ss_dssp             --TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence              011235678899999999999999999999999754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=3.1e-38  Score=343.05  Aligned_cols=237  Identities=21%  Similarity=0.343  Sum_probs=186.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccc--cCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLR--HKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~--H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||++....                 ..+.+.+|+.+|++++  ||||+++++++...+..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            459999999999999999997543                 2367889999999997  599999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      | +.+++|.+++....  .+++.++..++.||+.||.|||+   .+|+||||||+|||++ ++.+||+|||+++......
T Consensus       136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~  208 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  208 (390)
T ss_dssp             E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred             e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence            9 56889999997653  68999999999999999999999   8999999999999995 5899999999998765433


Q ss_pred             cc-eeeccccCcCCCCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcc
Q 035655          503 IS-HTTNVVGTIGYIAPELART-----------GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVL  570 (670)
Q Consensus       503 ~~-~~~~~~gt~~y~aPE~~~~-----------~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~  570 (670)
                      .. ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||......... ...        
T Consensus       209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~-~~~--------  279 (390)
T 2zmd_A          209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-LHA--------  279 (390)
T ss_dssp             -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHH--------
T ss_pred             ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH-HHH--------
Confidence            22 2345679999999999865           46899999999999999999999999753221111 111        


Q ss_pred             cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       571 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                       .+++.....++......+.+++..||+.||.+||++.|++++.+
T Consensus       280 -~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~  323 (390)
T 2zmd_A          280 -IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY  323 (390)
T ss_dssp             -HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             -HhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence             11111111111112356788999999999999999999998754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=5e-38  Score=337.02  Aligned_cols=244  Identities=22%  Similarity=0.339  Sum_probs=193.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..+.||+|+||.||++....                 ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            3578999999999999999997652                 23578899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccc-eEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ-VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      |+++++|.+++....  .+++..+..++.|++.||.|||+   . +|+||||||+|||++.++.+||+|||++...... 
T Consensus       112 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-  185 (360)
T 3eqc_A          112 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-  185 (360)
T ss_dssp             CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence            999999999996543  58999999999999999999998   5 8999999999999999999999999999755332 


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC--------------
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ--------------  568 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~--------------  568 (670)
                        ......||+.|+|||++.+..++.++|||||||+++||++|+.||.................+.              
T Consensus       186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (360)
T 3eqc_A          186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP  263 (360)
T ss_dssp             --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred             --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence              2234579999999999999999999999999999999999999997643322211111000000              


Q ss_pred             --------------------cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          569 --------------------VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       569 --------------------~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                                          ......+...   .......+.+++..||+.||.+|||++|+++|-.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  327 (360)
T 3eqc_A          264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLP---SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF  327 (360)
T ss_dssp             ----------CCCHHHHHHHHHHSCCCCCC---TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred             ccccccCCCCcccchhhhhHHhccCCCCCC---cccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence                                0000001110   0112346788999999999999999999998643

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.5e-37  Score=319.61  Aligned_cols=236  Identities=22%  Similarity=0.363  Sum_probs=191.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      ++|...+.||+|+||.||++....                      ..+.+.+|+.++++++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            568899999999999999997642                      2467899999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC----cEEEEeecCc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM----NARLGDFGLA  495 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~----~~kL~DFGla  495 (670)
                      +||||+++++|.+++...  ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++    .+||+|||++
T Consensus        85 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            999999999999999653  368999999999999999999998   8999999999999998877    8999999999


Q ss_pred             eeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      .......  ......||+.|+|||++.+..++.++||||||++++||++|+.||.......  ...... ..      ..
T Consensus       160 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~-~~------~~  228 (283)
T 3bhy_A          160 HKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE--TLTNIS-AV------NY  228 (283)
T ss_dssp             EECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHH-TT------CC
T ss_pred             eeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH--HHHHhH-hc------cc
Confidence            8765432  2234578999999999999999999999999999999999999997643211  111111 00      01


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .............+.+++.+||+.||.+||++.|++++
T Consensus       229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          229 DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence            11111112224567899999999999999999999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.5e-37  Score=351.12  Aligned_cols=239  Identities=25%  Similarity=0.325  Sum_probs=197.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||++....                   ....+.+|+++|++++||||+++++++.+.+.+++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            4679999999999999999997643                   234577999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++.......+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence            999999999999987665669999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .  ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....+.......      ...+   
T Consensus       340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~------~~~~---  408 (576)
T 2acx_A          340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV------PEEY---  408 (576)
T ss_dssp             C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC------CCCC---
T ss_pred             c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc------cccC---
Confidence            3  234458999999999999989999999999999999999999999864221 111111111111      1111   


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHh
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYL  614 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  614 (670)
                       +......+.+++..||+.||.+||     +++|+++|-
T Consensus       409 -p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp  446 (576)
T 2acx_A          409 -SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP  446 (576)
T ss_dssp             -CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred             -CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh
Confidence             122235678899999999999999     789999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=9.4e-38  Score=324.36  Aligned_cols=234  Identities=28%  Similarity=0.412  Sum_probs=187.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec----cCeeE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR----KRDLL  419 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~----~~~~~  419 (670)
                      +.|...+.||+|+||.||+|....                  ..+.+.+|+.++++++||||+++++++..    ....+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            347788899999999999997643                  23568899999999999999999998865    35689


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce--EEecccCCCcEEec-CCCcEEEEeecCce
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV--VIHRDVKSGNVLID-ADMNARLGDFGLAR  496 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDIkp~NILld-~~~~~kL~DFGla~  496 (670)
                      +||||+++|+|.+++...  ..+++..++.++.|++.||.|||+   .+  ++||||||+|||++ .++.+||+|||++.
T Consensus       106 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~  180 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             EEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence            999999999999999654  358999999999999999999998   67  99999999999998 78999999999997


Q ss_pred             eccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      .....   ......||+.|+|||++. +.++.++|||||||+++||++|+.||........ ...... .+...      
T Consensus       181 ~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~-~~~~~------  248 (290)
T 1t4h_A          181 LKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYRRVT-SGVKP------  248 (290)
T ss_dssp             GCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHHHHT-TTCCC------
T ss_pred             ccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-HHHHHh-ccCCc------
Confidence            54432   233457999999999876 4689999999999999999999999976332211 111111 11111      


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                        ...+......+.+++..||+.||.+||+++|++++-
T Consensus       249 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~  284 (290)
T 1t4h_A          249 --ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA  284 (290)
T ss_dssp             --GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             --cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCc
Confidence              111122234678899999999999999999999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.7e-37  Score=329.21  Aligned_cols=250  Identities=26%  Similarity=0.387  Sum_probs=185.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------hHHHHHHHHHH--HhccccCceeeeeeeee-----ccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------RMREFAAEIES--LGRLRHKHLVNLQGWCK-----RKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~--L~~l~H~nIv~l~g~~~-----~~~~~~lV~  422 (670)
                      .++|+..+.||+|+||.||+|....           ....+..|.++  +..++||||+++++++.     .....++||
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~   91 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM   91 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence            4679999999999999999997643           23455555555  45589999999998553     234679999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccc------cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW------EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ||+++|+|.+++...   ..++..++.++.||+.||.|||+.+      +++|+||||||+|||++.++.+||+|||+++
T Consensus        92 e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~  168 (336)
T 3g2f_A           92 EYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM  168 (336)
T ss_dssp             CCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred             ecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecccee
Confidence            999999999999654   3589999999999999999999821      1199999999999999999999999999998


Q ss_pred             eccCCCc-------ceeeccccCcCCCCcccccc-------CCCCccchhHHHHHHHHHHHhCCCCCCCCcch---hH--
Q 035655          497 LFDHGKI-------SHTTNVVGTIGYIAPELART-------GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI---LV--  557 (670)
Q Consensus       497 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~---~~--  557 (670)
                      .......       .......||+.|+|||++.+       ..++.++|||||||++|||++|+.|+......   ..  
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~  248 (336)
T 3g2f_A          169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF  248 (336)
T ss_dssp             ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT
T ss_pred             ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh
Confidence            7654321       12234579999999999876       35667999999999999999998776431110   00  


Q ss_pred             ----------HHHHHHhhcCCcccccCCCCCC--cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          558 ----------DWVLEFQHLGQVLDVVDPNLGS--SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       558 ----------~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                                ...........    ..+.+..  .........+.+++.+||+.||.+|||++|+++.|+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l  316 (336)
T 3g2f_A          249 QTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL  316 (336)
T ss_dssp             HHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence                      00000111111    1111111  11234566789999999999999999999999998753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=329.20  Aligned_cols=250  Identities=26%  Similarity=0.402  Sum_probs=192.9

Q ss_pred             CccchhhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc-ccCceeeeeeeee
Q 035655          350 HRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL-RHKHLVNLQGWCK  413 (670)
Q Consensus       350 ~~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~  413 (670)
                      ..+++.++....++|+..+.||+|+||.||+|....               ..+.+.+|+.+++++ +||||+++++++.
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            345666667778899999999999999999998632               346789999999999 7999999999997


Q ss_pred             c------cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcE
Q 035655          414 R------KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA  487 (670)
Q Consensus       414 ~------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~  487 (670)
                      .      .+..++||||+++|+|.+++.......+++..++.++.||+.||.|||+   .+++||||||+|||++.++.+
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~  168 (326)
T 2x7f_A           92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEV  168 (326)
T ss_dssp             ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCE
T ss_pred             eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCE
Confidence            6      4678999999999999999987655679999999999999999999999   899999999999999999999


Q ss_pred             EEEeecCceeccCCCcceeeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHH
Q 035655          488 RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLE  562 (670)
Q Consensus       488 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~  562 (670)
                      ||+|||++....... .......||+.|+|||++.     +..++.++|||||||+++||++|+.||.........+  .
T Consensus       169 kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~  245 (326)
T 2x7f_A          169 KLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF--L  245 (326)
T ss_dssp             EECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--H
T ss_pred             EEeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH--H
Confidence            999999998654322 1223457999999999986     5678999999999999999999999997643221111  1


Q ss_pred             HhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          563 FQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       563 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ... ..     .+.+..   ......+.+++..||+.||.+||+++|++++-
T Consensus       246 ~~~-~~-----~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp  288 (326)
T 2x7f_A          246 IPR-NP-----APRLKS---KKWSKKFQSFIESCLVKNHSQRPATEQLMKHP  288 (326)
T ss_dssp             HHH-SC-----CCCCSC---SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSH
T ss_pred             hhc-Cc-----cccCCc---cccCHHHHHHHHHHhccChhhCCCHHHHhhCh
Confidence            111 11     111111   11124677899999999999999999999853

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.4e-37  Score=323.81  Aligned_cols=235  Identities=24%  Similarity=0.401  Sum_probs=194.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|...+.||+|+||.||++....                   ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            4678899999999999999997643                   235678999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++++|.+++...  ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++......
T Consensus        94 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  168 (294)
T 2rku_A           94 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  168 (294)
T ss_dssp             EECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence            9999999999988654  368999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      . .......||+.|+|||.+.+..++.++||||||++++||++|+.||.......  ...... ...      ..+... 
T Consensus       169 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~-~~~------~~~~~~-  237 (294)
T 2rku_A          169 G-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--TYLRIK-KNE------YSIPKH-  237 (294)
T ss_dssp             T-CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHH-TTC------CCCCTT-
T ss_pred             c-cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHh-hcc------CCCccc-
Confidence            2 22334579999999999998889999999999999999999999998643221  111111 111      111111 


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                         ....+.+++.+||+.||.+||+++|++++-
T Consensus       238 ---~~~~~~~li~~~l~~~p~~Rps~~~ll~~~  267 (294)
T 2rku_A          238 ---INPVAASLIQKMLQTDPTARPTINELLNDE  267 (294)
T ss_dssp             ---SCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred             ---cCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence               224577899999999999999999999864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=2.3e-37  Score=320.46  Aligned_cols=232  Identities=22%  Similarity=0.342  Sum_probs=193.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||+|....                   ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            578999999999999999997643                   1356889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++....  .+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......
T Consensus        94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  168 (284)
T 2vgo_A           94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR  168 (284)
T ss_dssp             CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred             EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence            9999999999996543  58999999999999999999998   899999999999999999999999999997654322


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                         .....|++.|+|||++.+..++.++||||||++++||++|+.||........  ..... ..      +..+.    
T Consensus       169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~-~~------~~~~~----  232 (284)
T 2vgo_A          169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET--HRRIV-NV------DLKFP----  232 (284)
T ss_dssp             ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHH-TT------CCCCC----
T ss_pred             ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH--HHHHh-cc------ccCCC----
Confidence               2345789999999999999999999999999999999999999976432211  11111 11      11111    


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ......+.+++..||+.||.+||+++|++++-
T Consensus       233 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~  264 (284)
T 2vgo_A          233 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP  264 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred             CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence            12235677899999999999999999999854

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.9e-37  Score=340.02  Aligned_cols=238  Identities=24%  Similarity=0.332  Sum_probs=182.8

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch------------------------HHHHHHHHHHHhccccCceeeeeeeeecc
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR------------------------MREFAAEIESLGRLRHKHLVNLQGWCKRK  415 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~------------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~  415 (670)
                      ..++|...+.||+|+||.||+|.....                        ...+.+|+.+|++++||||+++++++.. 
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence            457899999999999999999976431                        1247899999999999999999999854 


Q ss_pred             CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC---cEEEEee
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM---NARLGDF  492 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~---~~kL~DF  492 (670)
                      +..++||||+++|+|.+++...  ..+++.++..++.|++.||+|||+   .+|+||||||+|||++.++   .+||+||
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~DF  286 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDF  286 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred             CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEeec
Confidence            5589999999999999998654  469999999999999999999998   8999999999999997544   5999999


Q ss_pred             cCceeccCCCcceeeccccCcCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcc--hhHHHHHHHhhcC
Q 035655          493 GLARLFDHGKISHTTNVVGTIGYIAPELART---GKASCSTDVFAYGVLLLEIATGRRPIDSDHF--ILVDWVLEFQHLG  567 (670)
Q Consensus       493 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~--~~~~~~~~~~~~~  567 (670)
                      |+++.....  .......||+.|+|||++.+   ..++.++|||||||+++||++|+.||.....  .+....    ..+
T Consensus       287 G~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i----~~~  360 (419)
T 3i6u_A          287 GHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI----TSG  360 (419)
T ss_dssp             STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHH----HTT
T ss_pred             ccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHH----hcC
Confidence            999876543  23345689999999999853   5778899999999999999999999975321  111111    111


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..      .............+.+++..||+.||.+||+++|+++|-+
T Consensus       361 ~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~  402 (419)
T 3i6u_A          361 KY------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW  402 (419)
T ss_dssp             CC------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             CC------CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence            10      0001111123466889999999999999999999999643

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=4.5e-37  Score=321.30  Aligned_cols=236  Identities=28%  Similarity=0.439  Sum_probs=196.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .+.|+..+.||+|+||.||+|+...                 ..+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            4568999999999999999997532                 34678999999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++++|.+++..   ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....... 
T Consensus       101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-  173 (303)
T 3a7i_A          101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-  173 (303)
T ss_dssp             CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-
T ss_pred             eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccc-
Confidence            9999999999854   368999999999999999999999   899999999999999999999999999998765432 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                      .......||+.|+|||++.+..++.++||||||++++||++|+.||..........  ... ..     ..+.+...+  
T Consensus       174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~-~~-----~~~~~~~~~--  243 (303)
T 3a7i_A          174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF--LIP-KN-----NPPTLEGNY--  243 (303)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHH-HS-----CCCCCCSSC--
T ss_pred             cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH--Hhh-cC-----CCCCCcccc--
Confidence            22344578999999999999999999999999999999999999997643221111  111 11     112222222  


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                        ...+.+++..||+.||.+||++.|++++..
T Consensus       244 --~~~l~~li~~~l~~dp~~Rps~~~ll~~~~  273 (303)
T 3a7i_A          244 --SKPLKEFVEACLNKEPSFRPTAKELLKHKF  273 (303)
T ss_dssp             --CHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred             --CHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence              245788999999999999999999998654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.3e-38  Score=335.09  Aligned_cols=242  Identities=25%  Similarity=0.389  Sum_probs=192.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|...+.||+|+||.||+|....                      ...++.+|+.++++++||||+++++++.+.+..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            4679999999999999999998321                      245788999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCc-----cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC---CCcEEEE
Q 035655          419 LLVYDYIPNGSLDSLLFDNEN-----FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLG  490 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~---~~~~kL~  490 (670)
                      ++||||+++|+|.+++.....     ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.   +..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEEC
Confidence            999999999999999976532     358999999999999999999999   89999999999999984   4469999


Q ss_pred             eecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCC
Q 035655          491 DFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQ  568 (670)
Q Consensus       491 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~  568 (670)
                      |||+++....... .......||+.|+|||++.+..++.++|||||||+++||++ |+.||.......  .. .....+.
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~-~~~~~~~  262 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VL-EFVTSGG  262 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HH-HHHHTTC
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--HH-HHHhcCC
Confidence            9999976543322 22334578999999999999999999999999999999998 999997643221  11 1111111


Q ss_pred             cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       569 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      .     +..    +......+.+++..||+.||.+||++.+++++|+..
T Consensus       263 ~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          263 R-----MDP----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             C-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C-----CCC----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            1     111    112235678899999999999999999999999753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.7e-37  Score=343.54  Aligned_cols=233  Identities=26%  Similarity=0.422  Sum_probs=193.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|...+.||+|+||.||+|....                   ....+.+|+.++++++||||+++++++...+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            578999999999999999997642                   1246789999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++.++  ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        96 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~  170 (476)
T 2y94_A           96 EYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE  170 (476)
T ss_dssp             ECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred             eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence            999999999999654  459999999999999999999998   899999999999999999999999999998765433


Q ss_pred             cceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                        ......||+.|+|||++.+..+ +.++|||||||+++||++|+.||........  .... ..+..      ....  
T Consensus       171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~--~~~i-~~~~~------~~p~--  237 (476)
T 2y94_A          171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL--FKKI-CDGIF------YTPQ--  237 (476)
T ss_dssp             --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH--HHHH-HTTCC------CCCT--
T ss_pred             --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH--HHHH-hcCCc------CCCc--
Confidence              2344579999999999988765 6899999999999999999999986432211  1111 11110      0111  


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                        .....+.+++..||+.||.+|||++|+++|-
T Consensus       238 --~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp  268 (476)
T 2y94_A          238 --YLNPSVISLLKHMLQVDPMKRATIKDIREHE  268 (476)
T ss_dssp             --TCCHHHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred             --cCCHHHHHHHHHHcCCCchhCcCHHHHHhCH
Confidence              1124577899999999999999999999863

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.5e-37  Score=330.34  Aligned_cols=235  Identities=24%  Similarity=0.415  Sum_probs=194.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|...+.||+|+||.||++....                   ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            4578889999999999999997643                   235688999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++++|.+++...  ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       120 ~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  194 (335)
T 2owb_A          120 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  194 (335)
T ss_dssp             ECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence            9999999999998654  368999999999999999999999   89999999999999999999999999999876543


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      . .......||+.|+|||++.+..++.++|||||||+++||++|+.||......  +....... ..      ..+...+
T Consensus       195 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~-~~------~~~~~~~  264 (335)
T 2owb_A          195 G-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRIKK-NE------YSIPKHI  264 (335)
T ss_dssp             T-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHH-TC------CCCCTTS
T ss_pred             c-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHhc-CC------CCCCccC
Confidence            2 2234457999999999999888999999999999999999999999864321  11111111 11      1111112


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                          ...+.+++.+||+.||.+||+++|++++-
T Consensus       265 ----~~~~~~li~~~l~~dp~~Rps~~ell~~~  293 (335)
T 2owb_A          265 ----NPVAASLIQKMLQTDPTARPTINELLNDE  293 (335)
T ss_dssp             ----CHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred             ----CHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence                24577899999999999999999999853

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=3.3e-37  Score=331.53  Aligned_cols=242  Identities=14%  Similarity=0.107  Sum_probs=195.2

Q ss_pred             hhHHHhhcCccccceEeeeCceeEEEeecc------------------chHHHHHHHHHHHhccc---cCceeeeeeeee
Q 035655          355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLP------------------TRMREFAAEIESLGRLR---HKHLVNLQGWCK  413 (670)
Q Consensus       355 ~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~------------------~~~~~f~~Ei~~L~~l~---H~nIv~l~g~~~  413 (670)
                      .++....++|...++||+|+||.||+|+..                  ....++..|++++++++   |+||+++++++.
T Consensus        58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~  137 (365)
T 3e7e_A           58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHL  137 (365)
T ss_dssp             CEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred             eeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence            344455678999999999999999999421                  13467888888888887   999999999999


Q ss_pred             ccCeeEEEEeccCCCCchhhcccC---CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-------
Q 035655          414 RKRDLLLVYDYIPNGSLDSLLFDN---ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-------  483 (670)
Q Consensus       414 ~~~~~~lV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-------  483 (670)
                      ..+..++||||+++|+|.+++...   ....+++.+++.++.||+.||+|||+   .+|+||||||+|||++.       
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~  214 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDD  214 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC--
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccc
Confidence            999999999999999999999642   23569999999999999999999999   89999999999999998       


Q ss_pred             ----CCcEEEEeecCceeccCC-CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHH
Q 035655          484 ----DMNARLGDFGLARLFDHG-KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVD  558 (670)
Q Consensus       484 ----~~~~kL~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~  558 (670)
                          ++.+||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||++|+.||......   
T Consensus       215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---  291 (365)
T 3e7e_A          215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG---  291 (365)
T ss_dssp             ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT---
T ss_pred             cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC---
Confidence                899999999999865432 223445568999999999999999999999999999999999999998642110   


Q ss_pred             HHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCC-CCHHHHHHHhcC
Q 035655          559 WVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEAR-PTMRQVLRYLNG  616 (670)
Q Consensus       559 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~  616 (670)
                                 .......+.....   .+.+.+++..|++.+|.+| |+++++.+.|+.
T Consensus       292 -----------~~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~  336 (365)
T 3e7e_A          292 -----------ECKPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK  336 (365)
T ss_dssp             -----------EEEECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred             -----------ceeechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence                       0001111111111   3456678888999999999 678888777764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=7.6e-38  Score=323.20  Aligned_cols=231  Identities=21%  Similarity=0.338  Sum_probs=187.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||+|....                  ...++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            4679999999999999999997642                  345788999999999 999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCc--cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC---------------
Q 035655          422 YDYIPNGSLDSLLFDNEN--FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---------------  484 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~---------------  484 (670)
                      |||+++++|.+++.....  ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.+               
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            999999999999976432  468999999999999999999999   899999999999999844               


Q ss_pred             ----CcEEEEeecCceeccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHH
Q 035655          485 ----MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW  559 (670)
Q Consensus       485 ----~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~  559 (670)
                          ..+||+|||++.......     ...||+.|+|||.+.+. .++.++|||||||+++||++|+.++.....    +
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~  237 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----W  237 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----H
T ss_pred             cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----H
Confidence                479999999998765432     23589999999998766 566899999999999999999887654321    1


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                        .....+..     +.+...    ....+.+++..||+.||.+||++.|++++-
T Consensus       238 --~~~~~~~~-----~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  281 (289)
T 1x8b_A          238 --HEIRQGRL-----PRIPQV----LSQEFTELLKVMIHPDPERRPSAMALVKHS  281 (289)
T ss_dssp             --HHHHTTCC-----CCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred             --HHHHcCCC-----CCCCcc----cCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence              11111111     112122    235678899999999999999999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=6.2e-37  Score=320.17  Aligned_cols=238  Identities=21%  Similarity=0.319  Sum_probs=189.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeee--eccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWC--KRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~--~~~~~~  418 (670)
                      .++|...+.||+|+||.||++....                    ..+.+.+|++++++++||||+++++++  .+....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            4689999999999999999997643                    235688999999999999999999998  455689


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++||||++++ |.+++.......+++..+..++.||+.||.|||+   .+++||||||+|||++.++.+||+|||++...
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence            9999999876 7777776556679999999999999999999999   89999999999999999999999999999876


Q ss_pred             cCCC-cceeeccccCcCCCCccccccCCC--CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          499 DHGK-ISHTTNVVGTIGYIAPELARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       499 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~--t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      .... ........||+.|+|||++.+...  +.++|||||||+++||++|+.||......  ....... .+.      .
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~-~~~------~  230 (305)
T 2wtk_C          160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLFENIG-KGS------Y  230 (305)
T ss_dssp             CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHH-HCC------C
T ss_pred             CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHHh-cCC------C
Confidence            5432 222344579999999999876543  78999999999999999999999864322  1111111 111      1


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .+...    ....+.+++.+||+.||.+||+++|++++-.
T Consensus       231 ~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~  266 (305)
T 2wtk_C          231 AIPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW  266 (305)
T ss_dssp             CCCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHH
T ss_pred             CCCCc----cCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence            11112    2346778999999999999999999998643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.2e-37  Score=337.03  Aligned_cols=251  Identities=22%  Similarity=0.317  Sum_probs=198.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccC--eeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR--DLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~--~~~lV  421 (670)
                      .++|...++||+|+||.||+|.+..                 ..+.+.+|++++++++||||+++++++...+  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            3578999999999999999998653                 2366789999999999999999999998655  78999


Q ss_pred             EeccCCCCchhhcccCCc-cccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe----cCCCcEEEEeecCce
Q 035655          422 YDYIPNGSLDSLLFDNEN-FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI----DADMNARLGDFGLAR  496 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl----d~~~~~kL~DFGla~  496 (670)
                      |||+++|+|.+++..... ..+++..++.++.||+.||+|||+   .+|+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999976432 239999999999999999999999   899999999999999    888889999999998


Q ss_pred             eccCCCcceeeccccCcCCCCcccccc--------CCCCccchhHHHHHHHHHHHhCCCCCCCCc--chhHHHHHHHhhc
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELART--------GKASCSTDVFAYGVLLLEIATGRRPIDSDH--FILVDWVLEFQHL  566 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~--~~~~~~~~~~~~~  566 (670)
                      ......  ......||+.|+|||++.+        ..++.++|||||||++|||++|+.||....  ....+........
T Consensus       165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~  242 (396)
T 4eut_A          165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG  242 (396)
T ss_dssp             ECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred             EccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence            765432  2334579999999998865        467789999999999999999999996421  1111111111111


Q ss_pred             C--Cccccc------------CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          567 G--QVLDVV------------DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       567 ~--~~~~~~------------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .  .....+            +..............+.+++..||+.||.+||+++|+++.++.
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~  306 (396)
T 4eut_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (396)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence            0  000000            1111223446677888999999999999999999999998865

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.1e-38  Score=335.01  Aligned_cols=240  Identities=25%  Similarity=0.323  Sum_probs=194.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKR  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~  416 (670)
                      .++|+..+.||+|+||.||+++...                       ..+.+.+|+++|+++ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            4679999999999999999987621                       124567899999999 5999999999999999


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..++||||+++|+|.+++...  ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             eEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            999999999999999999654  358999999999999999999998   899999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcc--hhHHHHHHHhhcCCcccc
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTG--KASCSTDVFAYGVLLLEIATGRRPIDSDHF--ILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~--~~~~~~~~~~~~~~~~~~  572 (670)
                      ..............||+.|+|||++.+.  .++.++|||||||++|||++|+.||.....  ............      
T Consensus       208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~------  281 (355)
T 1vzo_A          208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS------  281 (355)
T ss_dssp             ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC------
T ss_pred             ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc------
Confidence            7654443344556899999999998853  478999999999999999999999975321  111111111111      


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHHhcC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRYLNG  616 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~  616 (670)
                       .+..    +......+.+++..||+.||.+||     +++|++++..-
T Consensus       282 -~~~~----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f  325 (355)
T 1vzo_A          282 -EPPY----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  325 (355)
T ss_dssp             -CCCC----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             -CCCC----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence             1111    122235677899999999999999     99999998753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=331.69  Aligned_cols=231  Identities=22%  Similarity=0.313  Sum_probs=192.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~  416 (670)
                      .++|+..+.||+|+||.||+|+...                        ..+.+.+|+.++++++||||+++++++.+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            4679999999999999999997533                        1124668999999999999999999999999


Q ss_pred             eeEEEEeccCCC-CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCc
Q 035655          417 DLLLVYDYIPNG-SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA  495 (670)
Q Consensus       417 ~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla  495 (670)
                      ..++||||+.+| +|.+++....  .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a  177 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSA  177 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence            999999999877 9999996543  59999999999999999999999   89999999999999999999999999999


Q ss_pred             eeccCCCcceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      +......  ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......             ......
T Consensus       178 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------~~~~~~  242 (335)
T 3dls_A          178 AYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------VEAAIH  242 (335)
T ss_dssp             EECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------TTTCCC
T ss_pred             eECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------HhhccC
Confidence            8765543  2334579999999999988776 78999999999999999999999742110             000001


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      +      +......+.+++..||+.||.+||+++|++++-+-.
T Consensus       243 ~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~  279 (335)
T 3dls_A          243 P------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVT  279 (335)
T ss_dssp             C------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTT
T ss_pred             C------CcccCHHHHHHHHHHccCChhhCcCHHHHhcCcccc
Confidence            1      111234578899999999999999999999975543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.8e-38  Score=331.48  Aligned_cols=248  Identities=22%  Similarity=0.298  Sum_probs=186.4

Q ss_pred             cCccccceEeeeCceeEEEeeccch-----------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR-----------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~-----------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|...++||+|+||.||+|.....                 ...+.+|++++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            5789999999999999999986531                 11345799999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      ++ |+|.+++.... ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... .
T Consensus        82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~  155 (324)
T 3mtl_A           82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-K  155 (324)
T ss_dssp             CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred             cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCc-c
Confidence            97 59999887653 368999999999999999999998   899999999999999999999999999998654332 2


Q ss_pred             eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcC---Ccccc-------
Q 035655          505 HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLG---QVLDV-------  572 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~---~~~~~-------  572 (670)
                      ......||+.|+|||++.+ ..++.++|||||||+++||++|+.||...... ............   .....       
T Consensus       156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (324)
T 3mtl_A          156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK  235 (324)
T ss_dssp             -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred             ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence            2334578999999999876 56899999999999999999999999864322 111111111000   00000       


Q ss_pred             --cCCCCCCc----ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          573 --VDPNLGSS----YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       573 --~d~~l~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                        ..+.....    ........+.+++..||+.||.+|||++|++++-+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  284 (324)
T 3mtl_A          236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF  284 (324)
T ss_dssp             HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence              00000000    01112356789999999999999999999999654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=4.7e-37  Score=345.90  Aligned_cols=238  Identities=26%  Similarity=0.336  Sum_probs=194.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|...+.||+|+||.||+++...                   ..+.+.+|+.+|++++||||+++++++...+.+++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            4678999999999999999998643                   124678899999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCC--ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          422 YDYIPNGSLDSLLFDNE--NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      |||+++|+|.+++....  ...+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            99999999999997643  4469999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcc--hhHHHHHHHhhcCCcccccCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHF--ILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~--~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....  .......... ...      .. 
T Consensus       341 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~-~~~------~~-  411 (543)
T 3c4z_A          341 AGQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL-EQA------VT-  411 (543)
T ss_dssp             TTC-CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHH-HCC------CC-
T ss_pred             CCC-cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHh-hcc------cC-
Confidence            433 223345899999999999999999999999999999999999999976321  1111111111 111      11 


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTM-----RQVLRY  613 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  613 (670)
                         ++......+.+++..||+.||.+||++     +++++|
T Consensus       412 ---~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H  449 (543)
T 3c4z_A          412 ---YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH  449 (543)
T ss_dssp             ---CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred             ---CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence               112223567789999999999999965     777764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.2e-37  Score=334.59  Aligned_cols=248  Identities=23%  Similarity=0.351  Sum_probs=181.1

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccc-cCceeeeeeeeecc--Cee
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRK--RDL  418 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~--~~~  418 (670)
                      ..++|+..+.||+|+||.||+|.+..                  ..+.+.+|+.+++++. ||||+++++++...  ...
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            45789999999999999999997543                  2356779999999997 99999999999754  378


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++||||++ ++|.+++..   ..+++..+..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        87 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             EEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred             EEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence            99999997 689999865   368999999999999999999999   89999999999999999999999999999875


Q ss_pred             cCCC--------------------cceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-h
Q 035655          499 DHGK--------------------ISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-L  556 (670)
Q Consensus       499 ~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~  556 (670)
                      ....                    ....+..+||+.|+|||++.+ ..++.++|||||||+++||++|+.||...... .
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  239 (388)
T 3oz6_A          160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ  239 (388)
T ss_dssp             SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            4311                    112344589999999999876 67899999999999999999999999764321 1


Q ss_pred             HHHHHHHhhcCCccc---------------------ccCCCCCCccc------------HHHHHHHHHHHHhhccCCCCC
Q 035655          557 VDWVLEFQHLGQVLD---------------------VVDPNLGSSYV------------VAEMELVLQLGLLCSHQKAEA  603 (670)
Q Consensus       557 ~~~~~~~~~~~~~~~---------------------~~d~~l~~~~~------------~~~~~~l~~l~~~Cl~~dP~~  603 (670)
                      ...............                     .........++            ......+.+++.+||+.||.+
T Consensus       240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~  319 (388)
T 3oz6_A          240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK  319 (388)
T ss_dssp             HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred             HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence            111111000000000                     00000000010            011346789999999999999


Q ss_pred             CCCHHHHHHHh
Q 035655          604 RPTMRQVLRYL  614 (670)
Q Consensus       604 RPs~~evl~~L  614 (670)
                      |||++|+++|-
T Consensus       320 R~t~~e~l~Hp  330 (388)
T 3oz6_A          320 RISANDALKHP  330 (388)
T ss_dssp             SCCHHHHTTST
T ss_pred             CCCHHHHhCCH
Confidence            99999999984

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=6.1e-38  Score=361.03  Aligned_cols=231  Identities=26%  Similarity=0.380  Sum_probs=185.0

Q ss_pred             ceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++||+|+||.||+|.+..                    ..++|.+|+++|++++||||++++++|.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            479999999999995421                    24689999999999999999999999964 568999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc--ce
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI--SH  505 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~--~~  505 (670)
                      |+|.+++...  ..+++.+++.++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++.......  ..
T Consensus       454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~  528 (635)
T 4fl3_A          454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  528 (635)
T ss_dssp             EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred             CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence            9999999654  358999999999999999999999   8999999999999999999999999999987654332  22


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||........   ......+..     +    ..+..
T Consensus       529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~---~~~i~~~~~-----~----~~p~~  596 (635)
T 4fl3_A          529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV---TAMLEKGER-----M----GCPAG  596 (635)
T ss_dssp             ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---HHHHHTTCC-----C----CCCTT
T ss_pred             ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcCCC-----C----CCCCC
Confidence            233467889999999999999999999999999999998 9999986433211   111111111     1    11222


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ....+.+++..||+.||.+||++++|++.|+.
T Consensus       597 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          597 CPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            34668889999999999999999999999863

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=8.8e-38  Score=331.31  Aligned_cols=247  Identities=22%  Similarity=0.301  Sum_probs=183.6

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ..++|+..++||+|+||.||+++...                  ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            45679999999999999999997532                  134577999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe-----cCCCcEEEEeecCce
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI-----DADMNARLGDFGLAR  496 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl-----d~~~~~kL~DFGla~  496 (670)
                      |||++ |+|.+++....  .+++.++..++.||+.||.|||+   .+|+||||||+|||+     +.++.+||+|||+++
T Consensus       112 ~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~  185 (329)
T 3gbz_A          112 FEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR  185 (329)
T ss_dssp             EECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred             EecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence            99997 59999997653  58999999999999999999999   899999999999999     455569999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc----
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD----  571 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~----  571 (670)
                      ...... .......||+.|+|||++.+. .++.++|||||||+++||++|+.||.......... ......+....    
T Consensus       186 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~  263 (329)
T 3gbz_A          186 AFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF-KIFEVLGLPDDTTWP  263 (329)
T ss_dssp             HHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHHHCCCCTTTST
T ss_pred             ccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHH-HHHHHhCCCchhhhh
Confidence            665332 223445789999999998875 48999999999999999999999997643221111 00110000000    


Q ss_pred             ---------ccCCCCCCc-----ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          572 ---------VVDPNLGSS-----YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       572 ---------~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                               ...+.....     ........+.+++..||+.||.+|||++|+++|-
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  320 (329)
T 3gbz_A          264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP  320 (329)
T ss_dssp             TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCc
Confidence                     000011111     0111235678999999999999999999999854

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=7e-38  Score=329.24  Aligned_cols=244  Identities=19%  Similarity=0.254  Sum_probs=186.0

Q ss_pred             cCcccc-ceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQS-EVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~-~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      +.|.+. +.||+|+||.||++....                ..+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            467764 789999999999997532                246788999999985 79999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc---EEEEeecCceeccC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGLARLFDH  500 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~---~kL~DFGla~~~~~  500 (670)
                      |+++|+|.+++...  ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.   +||+|||+++....
T Consensus        92 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  166 (316)
T 2ac3_A           92 KMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL  166 (316)
T ss_dssp             CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred             cCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence            99999999999764  358999999999999999999999   89999999999999998776   99999999976543


Q ss_pred             CCc------ceeeccccCcCCCCcccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHH----------
Q 035655          501 GKI------SHTTNVVGTIGYIAPELART-----GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW----------  559 (670)
Q Consensus       501 ~~~------~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~----------  559 (670)
                      ...      .......||+.|+|||++..     ..++.++|||||||+++||++|+.||.........|          
T Consensus       167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  246 (316)
T 2ac3_A          167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ  246 (316)
T ss_dssp             ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred             CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence            211      11223469999999999875     457899999999999999999999997632211000          


Q ss_pred             --HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          560 --VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       560 --~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                        .......+.      ..+...........+.+++.+||+.||.+||+++|++++-.-
T Consensus       247 ~~~~~~i~~~~------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~  299 (316)
T 2ac3_A          247 NMLFESIQEGK------YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV  299 (316)
T ss_dssp             HHHHHHHHHCC------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTC
T ss_pred             HHHHHHHhccC------cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhh
Confidence              111111111      011000001123567899999999999999999999997543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=8.5e-38  Score=331.50  Aligned_cols=247  Identities=28%  Similarity=0.380  Sum_probs=189.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .++|+..+.||+|+||.||++....                  ..+.+.+|+.++++++||||++++++|.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            3578899999999999999997643                  1345779999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus       104 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A          104 EFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             ECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             ecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence            999999999887543  359999999999999999999999   899999999999999999999999999998654432


Q ss_pred             cceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-HHHHH------------HhhcCC
Q 035655          503 ISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-DWVLE------------FQHLGQ  568 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~~~~~------------~~~~~~  568 (670)
                       .......||+.|+|||++.+. .++.++|||||||+++||++|+.||........ .....            ......
T Consensus       179 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (331)
T 4aaa_A          179 -EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV  257 (331)
T ss_dssp             ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred             -cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence             223345789999999998775 789999999999999999999999986432211 10000            000000


Q ss_pred             cccccCCCCCCcc-----cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          569 VLDVVDPNLGSSY-----VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       569 ~~~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ......+.+....     .....+.+.+++..||+.||.+||+++|++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            1111111111111     11234678899999999999999999999985

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=4.4e-37  Score=341.48  Aligned_cols=244  Identities=21%  Similarity=0.282  Sum_probs=185.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc------C
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK------R  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~  416 (670)
                      .++|+..++||+|+||.||++....                  ..+.+.+|+.+|++++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            5789999999999999999997543                  245678999999999999999999999654      4


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..++||||+++ +|.+.+.    ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       141 ~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~  212 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  212 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred             eEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence            57999999976 4666653    248999999999999999999999   899999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCc-------
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV-------  569 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~-------  569 (670)
                      .....  ...+...||+.|+|||++.+..++.++|||||||+++||++|+.||...... ..+.......+..       
T Consensus       213 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~~~~~~~  289 (464)
T 3ttj_A          213 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKK  289 (464)
T ss_dssp             ----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHTT
T ss_pred             ecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHH
Confidence            66543  2234568999999999999999999999999999999999999999864321 1111111100000       


Q ss_pred             -----cccc--CCCC----------------CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          570 -----LDVV--DPNL----------------GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       570 -----~~~~--d~~l----------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                           ...+  .+..                ...........+.+++.+||+.||.+|||++|+++|-.
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  358 (464)
T 3ttj_A          290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY  358 (464)
T ss_dssp             SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChh
Confidence                 0000  0000                01111223567889999999999999999999999854

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=7e-38  Score=324.86  Aligned_cols=243  Identities=24%  Similarity=0.344  Sum_probs=190.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|+..+.||+|+||.||+|.+..                      ..+.+.+|++++++++||||+++++++.... .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            4678999999999999999997421                      2356889999999999999999999998765 8


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||+++++|.+++.... ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++..
T Consensus        96 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccc
Confidence            99999999999999997643 468999999999999999999999   89999999999999999999999999999877


Q ss_pred             cCCCcc--eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          499 DHGKIS--HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       499 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      ......  ......+|..|+|||++.+..++.++||||||++++||++ |+.||......  +...........     .
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~-----~  244 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDKEGER-----L  244 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTSCCC-----C
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHccCCC-----C
Confidence            554322  1233467889999999998889999999999999999999 99999764322  111111111110     1


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCCC
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDEL  619 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  619 (670)
                      .    .+......+.+++..||+.||.+||++.+++++|+...+
T Consensus       245 ~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          245 P----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             C----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            1    111223567889999999999999999999999986543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=8.7e-37  Score=322.94  Aligned_cols=245  Identities=20%  Similarity=0.247  Sum_probs=193.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCc------eeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKH------LVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~n------Iv~l~g~~~~~~~~  418 (670)
                      .++|+..+.||+|+||.||++....                ..+.+.+|++++++++|+|      ++++++++...+..
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            4689999999999999999997521                2356889999999998765      99999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC---------------
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---------------  483 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~---------------  483 (670)
                      ++||||+ +++|.+++.......+++.++..++.||+.||+|||+   .+|+||||||+|||++.               
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence            9999999 8999999987766679999999999999999999999   89999999999999987               


Q ss_pred             ----CCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHH-
Q 035655          484 ----DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVD-  558 (670)
Q Consensus       484 ----~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~-  558 (670)
                          ++.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||+++||++|+.||......... 
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  244 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA  244 (339)
T ss_dssp             EEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHH
T ss_pred             ccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence                668999999999865432    23457899999999999999999999999999999999999999764322111 


Q ss_pred             HHHHHhhc-----------CCcccc-----------------cCCCCC--CcccHHHHHHHHHHHHhhccCCCCCCCCHH
Q 035655          559 WVLEFQHL-----------GQVLDV-----------------VDPNLG--SSYVVAEMELVLQLGLLCSHQKAEARPTMR  608 (670)
Q Consensus       559 ~~~~~~~~-----------~~~~~~-----------------~d~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  608 (670)
                      ........           ......                 ....+.  ........+.+.+++..||+.||.+|||++
T Consensus       245 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~  324 (339)
T 1z57_A          245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR  324 (339)
T ss_dssp             HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHH
Confidence            11100000           000000                 000000  011234467789999999999999999999


Q ss_pred             HHHHH
Q 035655          609 QVLRY  613 (670)
Q Consensus       609 evl~~  613 (670)
                      |++++
T Consensus       325 ell~h  329 (339)
T 1z57_A          325 EALKH  329 (339)
T ss_dssp             HHTTS
T ss_pred             HHhcC
Confidence            99875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=4.5e-37  Score=319.38  Aligned_cols=238  Identities=25%  Similarity=0.356  Sum_probs=188.2

Q ss_pred             CccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      +|.....||+|+||.||+|....                ..+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            35556699999999999997532                24678899999999999999999999999999999999999


Q ss_pred             CCCchhhcccCC-ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-CCcEEEEeecCceeccCCCcc
Q 035655          427 NGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       427 ~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++|.+++.... ...+++..+..++.|++.||.|||+   .+++||||||+||+++. ++.+||+|||+++...... .
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~  178 (295)
T 2clq_A          103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-P  178 (295)
T ss_dssp             EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred             CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-C
Confidence            999999997653 3357789999999999999999999   89999999999999987 8999999999998765422 2


Q ss_pred             eeeccccCcCCCCccccccCC--CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          505 HTTNVVGTIGYIAPELARTGK--ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~--~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                      ......||+.|+|||++.+..  ++.++||||||++++||++|+.||............. ...     ...+.+..   
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~-----~~~~~~~~---  249 (295)
T 2clq_A          179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV-GMF-----KVHPEIPE---  249 (295)
T ss_dssp             --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH-HHH-----CCCCCCCT---
T ss_pred             cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh-ccc-----cccccccc---
Confidence            233457899999999987654  7899999999999999999999996532211111111 000     11122222   


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                       .....+.+++..||+.||.+||+++|++++-
T Consensus       250 -~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~  280 (295)
T 2clq_A          250 -SMSAEAKAFILKCFEPDPDKRACANDLLVDE  280 (295)
T ss_dssp             -TSCHHHHHHHHHTTCSSTTTSCCHHHHHTSG
T ss_pred             -cCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence             2235677899999999999999999999754

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.5e-37  Score=324.11  Aligned_cols=246  Identities=27%  Similarity=0.422  Sum_probs=179.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..+.||+|+||.||++....                 ..+++.+|+.++++++||||+++++++...+..++|||
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   93 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK   93 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence            5789999999999999999997532                 23567899999999999999999999999999999999


Q ss_pred             ccCCCCchhhccc------CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          424 YIPNGSLDSLLFD------NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       424 ~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      |+++++|.+++..      .....+++..++.++.||+.||.|||+   .+++||||||+||+++.++.+||+|||++..
T Consensus        94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  170 (303)
T 2vwi_A           94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAF  170 (303)
T ss_dssp             CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred             hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence            9999999999864      123468999999999999999999999   8999999999999999999999999999976


Q ss_pred             ccCCCc----ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhc-CCcc-
Q 035655          498 FDHGKI----SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHL-GQVL-  570 (670)
Q Consensus       498 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~-~~~~-  570 (670)
                      ......    .......||+.|+|||++.+ ..++.++|||||||+++||++|+.||.......... ...... .... 
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~  249 (303)
T 2vwi_A          171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM-LTLQNDPPSLET  249 (303)
T ss_dssp             CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH-HHHTSSCCCTTC
T ss_pred             eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH-HHhccCCCcccc
Confidence            543221    12234579999999999875 568999999999999999999999998643221111 111110 0000 


Q ss_pred             cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       571 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...++.....+    ...+.+++..||+.||.+||++.|++++-
T Consensus       250 ~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~h~  289 (303)
T 2vwi_A          250 GVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLRHK  289 (303)
T ss_dssp             -----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred             ccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence            01111111222    34678899999999999999999999853

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.7e-37  Score=328.06  Aligned_cols=252  Identities=27%  Similarity=0.314  Sum_probs=191.4

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccch---------------------HHHHHHHHHHHhccccCceeeeeeeeeccCe
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPTR---------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~~---------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~  417 (670)
                      ...++|+..+.||+|+||.||+|.....                     .+.+.+|++++++++||||+++++++.+.+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            3457899999999999999999976431                     2367799999999999999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++||||+++ +|.+++.... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKS  161 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred             eEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence            9999999985 8988886543 468999999999999999999999   8999999999999999999999999999986


Q ss_pred             ccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcC---Cccc-
Q 035655          498 FDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLG---QVLD-  571 (670)
Q Consensus       498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~---~~~~-  571 (670)
                      ..... .......||+.|+|||++.+. .++.++|||||||+++||++|..||...... ............   .... 
T Consensus       162 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  240 (346)
T 1ua2_A          162 FGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM  240 (346)
T ss_dssp             TTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred             ccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence            64432 223445789999999998764 5889999999999999999999999764321 111111110000   0000 


Q ss_pred             --ccC---CCCCCccc-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          572 --VVD---PNLGSSYV-----VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       572 --~~d---~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                        ..+   .......+     ......+.+++..||+.||.+|||++|++++-.-
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f  295 (346)
T 1ua2_A          241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF  295 (346)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred             ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence              000   00000001     1223678899999999999999999999998653

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=330.06  Aligned_cols=252  Identities=24%  Similarity=0.379  Sum_probs=193.2

Q ss_pred             hcCccccceEeeeCceeEEEeecc----c----------------hHHHHHHHHHHHhccccCceeeeeeeeeccC--ee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLP----T----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR--DL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~----~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~--~~  418 (670)
                      .++|+..+.||+|+||.||++...    .                ..+.+.+|++++++++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            356888999999999999999731    1                2467899999999999999999999987654  78


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ++|+||+++++|.+++.... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVL  195 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence            99999999999999997653 369999999999999999999998   89999999999999999999999999999877


Q ss_pred             cCCCcce--eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHH----hhcCCcccc
Q 035655          499 DHGKISH--TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEF----QHLGQVLDV  572 (670)
Q Consensus       499 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~----~~~~~~~~~  572 (670)
                      .......  .....++..|+|||.+.+..++.++|||||||+++||++|+.|+..............    .....+.+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (326)
T 2w1i_A          196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL  275 (326)
T ss_dssp             CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred             cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence            6543221  2234677889999999988899999999999999999999999864211110000000    000000001


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +........+......+.+++..||+.||.+||++.|+++.|+.
T Consensus       276 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~  319 (326)
T 2w1i_A          276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ  319 (326)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred             hhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            11110111122234568889999999999999999999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=9e-37  Score=322.77  Aligned_cols=245  Identities=22%  Similarity=0.274  Sum_probs=191.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------hHHHHHHHHHHHhccc-cCceeeeeeeeec--cCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------RMREFAAEIESLGRLR-HKHLVNLQGWCKR--KRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~--~~~~~lV~E~  424 (670)
                      .++|+..++||+|+||.||+|+...             ..+.+.+|++++++++ ||||+++++++.+  ....++||||
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~  114 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  114 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence            3678999999999999999997532             4578999999999997 9999999999987  5678999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceeccCCCc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFDHGKI  503 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~~~~  503 (670)
                      +++++|.+++.     .+++.++..++.||+.||+|||+   .+|+||||||+|||++.++ .+||+|||+++...... 
T Consensus       115 ~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-  185 (330)
T 3nsz_A          115 VNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-  185 (330)
T ss_dssp             CCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC-
T ss_pred             cCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC-
Confidence            99999999983     48999999999999999999998   8999999999999999777 89999999998765433 


Q ss_pred             ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHh-----------hcCC---
Q 035655          504 SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ-----------HLGQ---  568 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~-----------~~~~---  568 (670)
                       ......||..|+|||++.+ ..++.++|||||||+++||++|+.||...............           ....   
T Consensus       186 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  264 (330)
T 3nsz_A          186 -EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL  264 (330)
T ss_dssp             -CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred             -ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc
Confidence             2334578999999999877 67899999999999999999999999653221111110000           0000   


Q ss_pred             ---cccccCC--------CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          569 ---VLDVVDP--------NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       569 ---~~~~~d~--------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                         ..+....        .............+.+++..||+.||.+|||++|+++|-.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~  322 (330)
T 3nsz_A          265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY  322 (330)
T ss_dssp             CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGG
T ss_pred             ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCcc
Confidence               0000000        0001111123467889999999999999999999998643

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.2e-37  Score=327.74  Aligned_cols=243  Identities=26%  Similarity=0.430  Sum_probs=191.0

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ..++|+..+.||+|+||.||+|....               ..+.+.+|+.++++++||||+++++++.+.+..++|+||
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~  110 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL  110 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBC
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeec
Confidence            35788999999999999999997543               235677899999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC--
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK--  502 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~--  502 (670)
                      +++++|.+++.... ..+++.+++.++.||+.||+|||+   .+++||||||+|||++ ++.+||+|||+++......  
T Consensus       111 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~  185 (319)
T 2y4i_B          111 CKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG  185 (319)
T ss_dssp             CCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred             ccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence            99999999997643 469999999999999999999999   8999999999999998 6799999999987653211  


Q ss_pred             --cceeeccccCcCCCCcccccc---------CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc
Q 035655          503 --ISHTTNVVGTIGYIAPELART---------GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD  571 (670)
Q Consensus       503 --~~~~~~~~gt~~y~aPE~~~~---------~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~  571 (670)
                        ........||+.|+|||++..         ..++.++|||||||+++||++|+.||.........+  ... .+.   
T Consensus       186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~-~~~---  259 (319)
T 2y4i_B          186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW--QMG-TGM---  259 (319)
T ss_dssp             --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH--HHH-TTC---
T ss_pred             ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--Hhc-cCC---
Confidence              112233468999999998864         457899999999999999999999998644322211  111 111   


Q ss_pred             ccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          572 VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       572 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                        .+....   ......+.+++..||+.||.+||+++++++.|+...
T Consensus       260 --~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~  301 (319)
T 2y4i_B          260 --KPNLSQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP  301 (319)
T ss_dssp             --CCCCCC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred             --CCCCCc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence              111110   011234778999999999999999999999998754

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=100.00  E-value=1.3e-37  Score=280.10  Aligned_cols=114  Identities=30%  Similarity=0.453  Sum_probs=105.1

Q ss_pred             CcEEEEEeeecCCCCCCCCCCCCeeEEecCCcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecC
Q 035655          145 NHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMN  224 (670)
Q Consensus       145 ~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~  224 (670)
                      ||+|||||||++| .++|||++|||||||||+.|.++++           +++.+|+.++|||+||+.+++|+|+|++.+
T Consensus         1 n~~vAVEFDT~~N-~e~~Dp~~nHVGIdvNsi~S~~s~~-----------~~l~sG~~~~v~I~Yd~~~~~L~V~l~~~~   68 (133)
T 1qmo_E            1 SNVVAVEFDTYLN-PDYGDPNYIHIGIDVNSIRSKVTAK-----------WDWQNGKIATAHISYNSVSKRLSVTSYYAG   68 (133)
T ss_dssp             CCCEEEEEECSCC-GGGTCCSSCEEEEEESSSSCSEEEE-----------CCCCTTSCEEEEEEEETTTTEEEEEEECSS
T ss_pred             CCEEEEEEeCCcC-ccccCCCCCeeEEecccccccceee-----------eEEcCCCEEEEEEEEeCCCcEEEEEEccCC
Confidence            6899999999999 7889999999999999999998876           457899999999999999999999998754


Q ss_pred             CcccccccCCCCCCcccccccCCcccccccceeeEeecCCceeeeEEEeccccccCC
Q 035655          225 KKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNG  281 (670)
Q Consensus       225 ~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsastg~~~~~h~i~sW~fs~~~  281 (670)
                      .           ..|+|+..+||+++|||+||||||||||...|.|+|++|+|+++.
T Consensus        69 ~-----------~~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~l  114 (133)
T 1qmo_E           69 S-----------KPATLSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSSL  114 (133)
T ss_dssp             S-----------CCEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEEEE
T ss_pred             C-----------ccceEEEeechHHhccccEEEEEEeccCCCcceeEEEEEEEEeeC
Confidence            3           268999999999999999999999999999999999999999864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=3.4e-37  Score=333.84  Aligned_cols=246  Identities=20%  Similarity=0.236  Sum_probs=192.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccc--------cCceeeeeeeee----
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLR--------HKHLVNLQGWCK----  413 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~--------H~nIv~l~g~~~----  413 (670)
                      .++|+..++||+|+||.||+|+...               ..+.+.+|+.++++++        |+||+++++++.    
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            4689999999999999999997643               2367889999999996        788999999987    


Q ss_pred             ccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccc-eEEecccCCCcEEecCCC-------
Q 035655          414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ-VVIHRDVKSGNVLIDADM-------  485 (670)
Q Consensus       414 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~ivHrDIkp~NILld~~~-------  485 (670)
                      .....++||||+ +++|.+++.......+++..++.++.||+.||.|||+   + +|+||||||+|||++.++       
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhhhh
Confidence            566899999999 6677777766555579999999999999999999998   7 999999999999999775       


Q ss_pred             ------------------------------------------cEEEEeecCceeccCCCcceeeccccCcCCCCcccccc
Q 035655          486 ------------------------------------------NARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART  523 (670)
Q Consensus       486 ------------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~  523 (670)
                                                                .+||+|||+++.....    .....||+.|+|||++.+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~  267 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIG  267 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHT
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcC
Confidence                                                      7999999999876543    234578999999999999


Q ss_pred             CCCCccchhHHHHHHHHHHHhCCCCCCCCcch----hHHHHH-HHhhcCCc---------------------ccccCCCC
Q 035655          524 GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI----LVDWVL-EFQHLGQV---------------------LDVVDPNL  577 (670)
Q Consensus       524 ~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~----~~~~~~-~~~~~~~~---------------------~~~~d~~l  577 (670)
                      ..++.++|||||||++|||++|+.||......    ..+... .....+..                     ....+...
T Consensus       268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (397)
T 1wak_A          268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP  347 (397)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred             CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence            99999999999999999999999999753211    000000 00000000                     00000000


Q ss_pred             ---------CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          578 ---------GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       578 ---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                               ....+......+.+++.+||+.||.+|||++|+++|-
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  393 (397)
T 1wak_A          348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP  393 (397)
T ss_dssp             CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred             cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence                     0123456677899999999999999999999999863

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=4.7e-37  Score=340.69  Aligned_cols=249  Identities=21%  Similarity=0.290  Sum_probs=176.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec-----cCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR-----KRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-----~~~  417 (670)
                      .++|+..+.||+|+||.||+|+...                  ..+.+.+|+++|++++||||+++++++..     ...
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            4679999999999999999997542                  23578899999999999999999999843     357


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      +|+||||+ +++|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+||||+.++.+||+|||+++.
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  205 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLART  205 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             EEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchh
Confidence            89999998 57999998654  459999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCc--------------------------ceeeccccCcCCCCcccc-ccCCCCccchhHHHHHHHHHHHh------
Q 035655          498 FDHGKI--------------------------SHTTNVVGTIGYIAPELA-RTGKASCSTDVFAYGVLLLEIAT------  544 (670)
Q Consensus       498 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~t~ksDV~S~Gvvl~el~t------  544 (670)
                      ......                          ...+..+||+.|+|||++ ....++.++|||||||++|||++      
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~  285 (458)
T 3rp9_A          206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV  285 (458)
T ss_dssp             TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred             ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence            643221                          123445889999999976 56679999999999999999999      


Q ss_pred             -----CCCCCCCCcc---------------------hhHHHHHHHhhcC--------------CcccccCCCCC---Ccc
Q 035655          545 -----GRRPIDSDHF---------------------ILVDWVLEFQHLG--------------QVLDVVDPNLG---SSY  581 (670)
Q Consensus       545 -----G~~pf~~~~~---------------------~~~~~~~~~~~~~--------------~~~~~~d~~l~---~~~  581 (670)
                           |+.+|.+...                     .............              ...........   ...
T Consensus       286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (458)
T 3rp9_A          286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER  365 (458)
T ss_dssp             SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred             cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence                 5555543210                     0000000000000              00000000000   011


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .......+.+|+..||+.||.+|||++|+++|-.
T Consensus       366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~  399 (458)
T 3rp9_A          366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPF  399 (458)
T ss_dssp             STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             CCCCCHHHHHHHHHHhccCccccCCHHHHhcCHh
Confidence            1122456789999999999999999999999854

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.1e-36  Score=340.98  Aligned_cols=237  Identities=24%  Similarity=0.369  Sum_probs=189.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .++|+..++||+|+||.||+|+...                  ....+.+|+.++++++||||++++++|.+.+..++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4568999999999999999997642                  2457889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC---CcEEEEeecCceecc
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---MNARLGDFGLARLFD  499 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~---~~~kL~DFGla~~~~  499 (670)
                      ||+++|+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++..   +.+||+|||+++...
T Consensus       116 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~  190 (494)
T 3lij_A          116 ECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE  190 (494)
T ss_dssp             ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred             ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence            999999999988654  358999999999999999999999   899999999999999764   459999999998765


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ...  ......||+.|+|||++. +.++.++||||+||++|||++|+.||.......  ..... ..+..      ....
T Consensus       191 ~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i-~~~~~------~~~~  258 (494)
T 3lij_A          191 NQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE--ILRKV-EKGKY------TFDS  258 (494)
T ss_dssp             TTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH-HHTCC------CCCS
T ss_pred             CCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH-HhCCC------CCCc
Confidence            432  234457999999999886 568999999999999999999999998643221  11111 11111      0111


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .........+.+++..||+.||.+|||+.|+++|-
T Consensus       259 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp  293 (494)
T 3lij_A          259 PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHP  293 (494)
T ss_dssp             GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred             hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCc
Confidence            11112235678899999999999999999999763

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.7e-37  Score=321.97  Aligned_cols=240  Identities=26%  Similarity=0.422  Sum_probs=191.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ..++|+..+.||+|+||.||+|....              ..+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC  106 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence            35679999999999999999997653              2467899999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++++|.+++... ...+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....... ..
T Consensus       107 ~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~  181 (314)
T 3com_A          107 GAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-AK  181 (314)
T ss_dssp             TTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-SC
T ss_pred             CCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-cc
Confidence            999999998643 2468999999999999999999998   899999999999999999999999999998765432 22


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .....||+.|+|||++.+..++.++||||||++++||++|+.||.........+  ......      .+.+  ..+...
T Consensus       182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~------~~~~--~~~~~~  251 (314)
T 3com_A          182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF--MIPTNP------PPTF--RKPELW  251 (314)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHHSC------CCCC--SSGGGS
T ss_pred             cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHhcCC------Cccc--CCcccC
Confidence            334578999999999999899999999999999999999999997643221111  111110      1111  111122


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...+.+++..||+.||.+||++.+++++-
T Consensus       252 ~~~l~~li~~~l~~dp~~Rpt~~~ll~~~  280 (314)
T 3com_A          252 SDNFTDFVKQCLVKSPEQRATATQLLQHP  280 (314)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence            35678899999999999999999999854

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=5.6e-37  Score=337.40  Aligned_cols=252  Identities=21%  Similarity=0.245  Sum_probs=194.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhcc------ccCceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRL------RHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l------~H~nIv~l~g~~~~~~~~~  419 (670)
                      ..+|+..++||+|+||.||+|....               ..+++.+|+++++.+      +|+||+++++++...+..+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            4568999999999999999997643               235677899988887      4679999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc--EEEEeecCcee
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN--ARLGDFGLARL  497 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~--~kL~DFGla~~  497 (670)
                      +||||+. ++|.+++.......+++..++.++.||+.||+|||+   .+|+||||||+|||++.++.  +||+|||+++.
T Consensus       176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~  251 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY  251 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence            9999996 699999987766679999999999999999999999   89999999999999999987  99999999976


Q ss_pred             ccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhh---------cC
Q 035655          498 FDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQH---------LG  567 (670)
Q Consensus       498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~---------~~  567 (670)
                      ....    .....||+.|+|||++.+..++.++|||||||+++||++|+.||...... ..........         ..
T Consensus       252 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~  327 (429)
T 3kvw_A          252 EHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK  327 (429)
T ss_dssp             TTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBT
T ss_pred             cCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhh
Confidence            5432    23457899999999999999999999999999999999999999764321 1111111000         00


Q ss_pred             CcccccC--------------------------------CCCCCcc----cHHHHHHHHHHHHhhccCCCCCCCCHHHHH
Q 035655          568 QVLDVVD--------------------------------PNLGSSY----VVAEMELVLQLGLLCSHQKAEARPTMRQVL  611 (670)
Q Consensus       568 ~~~~~~d--------------------------------~~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  611 (670)
                      +....++                                +.....+    .......+.+++..||+.||.+|||++|++
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L  407 (429)
T 3kvw_A          328 RAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQAL  407 (429)
T ss_dssp             THHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             hhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHh
Confidence            0000000                                0000000    001135678999999999999999999999


Q ss_pred             HHhcCCCCC
Q 035655          612 RYLNGDELL  620 (670)
Q Consensus       612 ~~L~~~~~~  620 (670)
                      +|-+-....
T Consensus       408 ~Hpw~~~~~  416 (429)
T 3kvw_A          408 RHPWLRRRL  416 (429)
T ss_dssp             TSTTTC---
T ss_pred             CChhhccCC
Confidence            976544333

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=9.8e-38  Score=330.22  Aligned_cols=240  Identities=21%  Similarity=0.268  Sum_probs=174.5

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccc-cCceeeeeeeee--------c
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLR-HKHLVNLQGWCK--------R  414 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~--------~  414 (670)
                      ...+|+..++||+|+||.||++....                ..+.+.+|+.+++++. ||||+++++++.        .
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            34679999999999999999998632                2457889999999996 999999999983        3


Q ss_pred             cCeeEEEEeccCCCCchhhcccC-CccccCHHHHHHHHHHHHHHhhhccccccce--EEecccCCCcEEecCCCcEEEEe
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDN-ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV--VIHRDVKSGNVLIDADMNARLGD  491 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDIkp~NILld~~~~~kL~D  491 (670)
                      ....++|+||+. |+|.+++... ....+++.+++.++.||+.||.|||+   .+  |+||||||+|||++.++.+||+|
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~D  181 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCD  181 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred             CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEec
Confidence            445899999995 7999988652 23469999999999999999999998   77  99999999999999999999999


Q ss_pred             ecCceeccCCCcc-----------eeeccccCcCCCCcccc---ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhH
Q 035655          492 FGLARLFDHGKIS-----------HTTNVVGTIGYIAPELA---RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV  557 (670)
Q Consensus       492 FGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~  557 (670)
                      ||+++........           ......||+.|+|||++   .+..++.++|||||||+++||++|+.||....... 
T Consensus       182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-  260 (337)
T 3ll6_A          182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-  260 (337)
T ss_dssp             CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred             CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence            9999876543211           11234689999999998   56678999999999999999999999997532110 


Q ss_pred             HHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          558 DWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       558 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                       ..     .... ..   ..    .......+.+++..||+.||.+||+++|++++|+...
T Consensus       261 -~~-----~~~~-~~---~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~  307 (337)
T 3ll6_A          261 -IV-----NGKY-SI---PP----HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA  307 (337)
T ss_dssp             -----------C-CC---CT----TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -hh-----cCcc-cC---Cc----ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence             00     0000 00   00    0111134678899999999999999999999997653

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.3e-37  Score=334.07  Aligned_cols=234  Identities=24%  Similarity=0.277  Sum_probs=183.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHH-HhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIES-LGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~-L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+++...                   ..+.+.+|..+ ++.++||||+++++++.+.+.+++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            3578999999999999999997643                   12345567666 577899999999999999999999


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.+.  ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       117 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~  191 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE  191 (373)
T ss_dssp             EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred             EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence            99999999999999654  358999999999999999999998   8999999999999999999999999999985433


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........  ..... ...      ..+...
T Consensus       192 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~--~~~i~-~~~------~~~~~~  261 (373)
T 2r5t_A          192 HN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM--YDNIL-NKP------LQLKPN  261 (373)
T ss_dssp             CC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH--HHHHH-HSC------CCCCSS
T ss_pred             CC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHH-hcc------cCCCCC
Confidence            22 234456899999999999999999999999999999999999999976432211  11111 111      111111


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHH----HHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMR----QVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~----evl~~  613 (670)
                          ....+.+++..||+.||.+||++.    ++++|
T Consensus       262 ----~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h  294 (373)
T 2r5t_A          262 ----ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH  294 (373)
T ss_dssp             ----SCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred             ----CCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence                224577899999999999999974    55544

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1e-36  Score=324.82  Aligned_cols=247  Identities=18%  Similarity=0.293  Sum_probs=195.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------h-------H--------------HHHHHHHHHHhccccCceeeee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------R-------M--------------REFAAEIESLGRLRHKHLVNLQ  409 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------~-------~--------------~~f~~Ei~~L~~l~H~nIv~l~  409 (670)
                      .++|...+.||+|+||.||++....          .       .              +.+.+|+.++++++||||++++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            4689999999999999999997622          0       0              7899999999999999999999


Q ss_pred             eeeeccCeeEEEEeccCCCCchhh------cccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC
Q 035655          410 GWCKRKRDLLLVYDYIPNGSLDSL------LFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA  483 (670)
Q Consensus       410 g~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~  483 (670)
                      +++.+.+..++||||+++|+|.++      +.......+++..++.++.|++.||.|||+  +.+++||||||+||+++.
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~  187 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDK  187 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECT
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcC
Confidence            999999999999999999999999      665445679999999999999999999996  379999999999999999


Q ss_pred             CCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccC-CCCc-cchhHHHHHHHHHHHhCCCCCCCCcchhHHHHH
Q 035655          484 DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG-KASC-STDVFAYGVLLLEIATGRRPIDSDHFILVDWVL  561 (670)
Q Consensus       484 ~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~-ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~  561 (670)
                      ++.+||+|||++......   ......||..|+|||.+.+. .++. ++|||||||+++||++|+.||...... .+...
T Consensus       188 ~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~  263 (348)
T 2pml_X          188 NGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELFN  263 (348)
T ss_dssp             TSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHHH
T ss_pred             CCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHH
Confidence            999999999999876543   34456799999999999877 5666 999999999999999999999864321 11111


Q ss_pred             HHhhcCCcccccC------CCC---CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          562 EFQHLGQVLDVVD------PNL---GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       562 ~~~~~~~~~~~~d------~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      . ...+......+      +..   ...........+.+++..||+.||.+||+++|++++-
T Consensus       264 ~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp  324 (348)
T 2pml_X          264 N-IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE  324 (348)
T ss_dssp             H-HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred             H-HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence            1 11111100000      000   0000122345678899999999999999999999853

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=8.7e-37  Score=319.48  Aligned_cols=238  Identities=24%  Similarity=0.346  Sum_probs=193.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|...+.||+|+||.||++....                ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            4678999999999999999997642                234688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe---cCCCcEEEEeecCceeccCC
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl---d~~~~~kL~DFGla~~~~~~  501 (670)
                      +++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+||++   +.++.+||+|||+++.....
T Consensus        88 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~  162 (304)
T 2jam_A           88 VSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG  162 (304)
T ss_dssp             CCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred             CCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence            9999999998654  358999999999999999999999   899999999999999   78899999999999754432


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                         ......||+.|+|||++.+..++.++|||||||+++||++|+.||.......  .... ...+.. .     .....
T Consensus       163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~-i~~~~~-~-----~~~~~  230 (304)
T 2jam_A          163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--LFEK-IKEGYY-E-----FESPF  230 (304)
T ss_dssp             ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH-HHHCCC-C-----CCTTT
T ss_pred             ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHH-HHcCCC-C-----CCccc
Confidence               2234579999999999999999999999999999999999999997643211  1111 111110 0     01111


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .......+.+++..||+.||.+||+++|++++-.
T Consensus       231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~  264 (304)
T 2jam_A          231 WDDISESAKDFICHLLEKDPNERYTCEKALSHPW  264 (304)
T ss_dssp             TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence            1223356788999999999999999999998643

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=7.9e-37  Score=314.69  Aligned_cols=234  Identities=24%  Similarity=0.397  Sum_probs=184.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|...+.||+|+||.||+|....                   ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            3578999999999999999997642                   124678999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      +||+++++|.+++...  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++......
T Consensus        90 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  164 (276)
T 2h6d_A           90 MEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  164 (276)
T ss_dssp             EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred             EeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence            9999999999999654  358999999999999999999999   89999999999999999999999999999866543


Q ss_pred             CcceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .  ......||+.|+|||.+.+..+ +.++||||||++++||++|+.||.......  ..... ..+.      ..+...
T Consensus       165 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~-~~~~------~~~~~~  233 (276)
T 2h6d_A          165 E--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--LFKKI-RGGV------FYIPEY  233 (276)
T ss_dssp             --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH-HHCC------CCCCTT
T ss_pred             c--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHh-hcCc------ccCchh
Confidence            2  2234578999999999987765 689999999999999999999997643221  11111 1111      011111


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                          ....+.+++..||+.||.+||+++|++++-
T Consensus       234 ----~~~~l~~li~~~l~~~p~~Rps~~~~l~h~  263 (276)
T 2h6d_A          234 ----LNRSVATLLMHMLQVDPLKRATIKDIREHE  263 (276)
T ss_dssp             ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred             ----cCHHHHHHHHHHccCChhhCCCHHHHHhCh
Confidence                224577899999999999999999999964

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.3e-37  Score=336.45  Aligned_cols=228  Identities=15%  Similarity=0.157  Sum_probs=178.8

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHH---HHHhccccCceeeee-------e
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEI---ESLGRLRHKHLVNLQ-------G  410 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei---~~L~~l~H~nIv~l~-------g  410 (670)
                      ..++|...+.||+|+||.||+|+...                   ..+.|.+|+   +.|++++||||++++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            35779999999999999999998632                   236788999   555666899999998       5


Q ss_pred             eeeccC-----------------eeEEEEeccCCCCchhhcccCC-----ccccCHHHHHHHHHHHHHHhhhccccccce
Q 035655          411 WCKRKR-----------------DLLLVYDYIPNGSLDSLLFDNE-----NFVLSWEQRFNIIKGIAAGLLYLHEEWEQV  468 (670)
Q Consensus       411 ~~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~  468 (670)
                      ++...+                 ..++||||+ +|+|.+++....     ...+++..++.++.||+.||+|||+   .+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~  226 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YG  226 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence            555443                 289999999 689999997532     2245578999999999999999999   89


Q ss_pred             EEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccC-----------CCCccchhHHHHH
Q 035655          469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG-----------KASCSTDVFAYGV  537 (670)
Q Consensus       469 ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~t~ksDV~S~Gv  537 (670)
                      |+||||||+|||++.++.+||+|||+++....    ......| +.|+|||++.+.           .++.++|||||||
T Consensus       227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             eecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            99999999999999999999999999985332    3345577 999999999887           8999999999999


Q ss_pred             HHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          538 LLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       538 vl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ++|||++|+.||......           ........ .. ..+    ...+.+++..||+.||.+||++.|++++
T Consensus       302 il~elltg~~Pf~~~~~~-----------~~~~~~~~-~~-~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          302 VIYWIWCADLPITKDAAL-----------GGSEWIFR-SC-KNI----PQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             HHHHHHHSSCCC-----------------CCSGGGGS-SC-CCC----CHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             HHHHHHHCCCCCcccccc-----------cchhhhhh-hc-cCC----CHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            999999999999752210           00001111 00 111    2567889999999999999999999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.9e-37  Score=334.44  Aligned_cols=251  Identities=20%  Similarity=0.262  Sum_probs=187.9

Q ss_pred             HHhhcCccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCceeeeeeeeec-----------
Q 035655          358 YTATKGFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHLVNLQGWCKR-----------  414 (670)
Q Consensus       358 ~~~t~~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-----------  414 (670)
                      ....++|+..+.||+|+||.||+|....            ..+...+|++++++++||||+++++++..           
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~   82 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP   82 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence            4557789999999999999999997643            22334589999999999999999999843           


Q ss_pred             ---------------------------cCeeEEEEeccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccc
Q 035655          415 ---------------------------KRDLLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEW  465 (670)
Q Consensus       415 ---------------------------~~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~  465 (670)
                                                 ....++||||++ |+|.+.+..  .....+++..+..++.||+.||+|||+  
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--  159 (383)
T 3eb0_A           83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--  159 (383)
T ss_dssp             ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT--
T ss_pred             ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--
Confidence                                       334889999998 588877754  234569999999999999999999998  


Q ss_pred             cceEEecccCCCcEEec-CCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHH
Q 035655          466 EQVVIHRDVKSGNVLID-ADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIA  543 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld-~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~  543 (670)
                       .+|+||||||+|||++ .++.+||+|||+++......  ......||+.|+|||++.+. .++.++||||+||+++||+
T Consensus       160 -~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  236 (383)
T 3eb0_A          160 -LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI  236 (383)
T ss_dssp             -TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             -CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence             8999999999999998 68899999999998765433  23345789999999988765 4899999999999999999


Q ss_pred             hCCCCCCCCcch-hHHHHHHHhh----------cCCcccccCCCCCC-----cccHHHHHHHHHHHHhhccCCCCCCCCH
Q 035655          544 TGRRPIDSDHFI-LVDWVLEFQH----------LGQVLDVVDPNLGS-----SYVVAEMELVLQLGLLCSHQKAEARPTM  607 (670)
Q Consensus       544 tG~~pf~~~~~~-~~~~~~~~~~----------~~~~~~~~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  607 (670)
                      +|+.||...... ..........          .....+..-+.+..     .++......+.+++..||+.||.+|||+
T Consensus       237 ~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  316 (383)
T 3eb0_A          237 LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINP  316 (383)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence            999999864321 1111111000          00011111111111     1122234568899999999999999999


Q ss_pred             HHHHHHh
Q 035655          608 RQVLRYL  614 (670)
Q Consensus       608 ~evl~~L  614 (670)
                      .|+++|-
T Consensus       317 ~e~l~hp  323 (383)
T 3eb0_A          317 YEAMAHP  323 (383)
T ss_dssp             HHHHTSG
T ss_pred             HHHhcCH
Confidence            9999763

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.1e-36  Score=321.38  Aligned_cols=236  Identities=24%  Similarity=0.338  Sum_probs=187.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccch------------------------HHHHHHHHHHHhccccCceeeeeeeeeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPTR------------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKR  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~~------------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~  416 (670)
                      .++|...+.||+|+||.||+|.....                        ...+.+|++++++++||||+++++++...+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            46799999999999999999976431                        124779999999999999999999987655


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc---EEEEeec
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN---ARLGDFG  493 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~---~kL~DFG  493 (670)
                       .++||||+++++|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.   +||+|||
T Consensus        89 -~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg  162 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFG  162 (322)
T ss_dssp             -EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred             -eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence             89999999999999998654  468999999999999999999998   89999999999999987665   9999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCcc--hhHHHHHHHhhcCC
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIATGRRPIDSDHF--ILVDWVLEFQHLGQ  568 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~--~~~~~~~~~~~~~~  568 (670)
                      +++......  ......||+.|+|||++.   ...++.++|||||||+++||++|+.||.....  .+.....    .+.
T Consensus       163 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~  236 (322)
T 2ycf_A          163 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT----SGK  236 (322)
T ss_dssp             TCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH----HTC
T ss_pred             cceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH----hCc
Confidence            998765422  223457999999999874   56789999999999999999999999975322  1111111    111


Q ss_pred             cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       569 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .      .............+.+++..||+.||.+||++.|++++-
T Consensus       237 ~------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~  276 (322)
T 2ycf_A          237 Y------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP  276 (322)
T ss_dssp             C------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             c------ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCc
Confidence            0      000111112246678999999999999999999999753

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=9e-37  Score=316.33  Aligned_cols=237  Identities=23%  Similarity=0.283  Sum_probs=177.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .++|+..+.||+|+||.||++....                  ..+.+.++...++.++||||+++++++.+.+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            4679999999999999999998632                  1123445556688899999999999999999999999


Q ss_pred             eccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccccc-eEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          423 DYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ-VVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       423 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      ||++ |+|.+++..  .....+++..++.++.|++.||.|||+   + +++||||||+||+++.++.+||+|||+++...
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            9997 588888754  233579999999999999999999998   7 99999999999999999999999999998665


Q ss_pred             CCCcceeeccccCcCCCCcccc----ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELA----RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      ...  ......||+.|+|||++    .+..++.++|||||||+++||++|+.||............... . .     .+
T Consensus       162 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~-~-----~~  232 (290)
T 3fme_A          162 DDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-E-P-----SP  232 (290)
T ss_dssp             ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-S-C-----CC
T ss_pred             ccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc-c-C-----CC
Confidence            432  22334799999999996    5567899999999999999999999999753322222211111 1 1     11


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ...   .......+.+++..||+.||.+|||++|++++
T Consensus       233 ~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          233 QLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             CCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             Ccc---cccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            111   11123557889999999999999999999884

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=6.7e-37  Score=328.40  Aligned_cols=257  Identities=23%  Similarity=0.291  Sum_probs=190.8

Q ss_pred             cchhhHHHhhcCccccceEeeeCceeEEEeeccch--------------------------HHHHHHHHHHHhccccCce
Q 035655          352 FRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTR--------------------------MREFAAEIESLGRLRHKHL  405 (670)
Q Consensus       352 ~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~~--------------------------~~~f~~Ei~~L~~l~H~nI  405 (670)
                      ....++....++|...+.||+|+||.||+|....+                          .+.+.+|++++++++||||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            34567788899999999999999999999965331                          2678999999999999999


Q ss_pred             eeeeeeeec-----cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEE
Q 035655          406 VNLQGWCKR-----KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVL  480 (670)
Q Consensus       406 v~l~g~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NIL  480 (670)
                      +++++++..     ....++||||++ |+|.+++.... ..+++..+..++.||+.||.|||+   .+|+||||||+|||
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNIL  166 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEE
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEE
Confidence            999999843     346899999997 68888886543 469999999999999999999999   89999999999999


Q ss_pred             ecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHH
Q 035655          481 IDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVD  558 (670)
Q Consensus       481 ld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~  558 (670)
                      ++.++.+||+|||+++......  ......||+.|+|||++.+ ..++.++|||||||+++||++|+.||...... ...
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  244 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN  244 (362)
T ss_dssp             ECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             EcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            9999999999999997544322  2344578999999998876 67899999999999999999999999864321 111


Q ss_pred             HHHHHhhcC------------------CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          559 WVLEFQHLG------------------QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       559 ~~~~~~~~~------------------~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .........                  .....................+.+++..||+.||.+|||++|+++|-.
T Consensus       245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  319 (362)
T 3pg1_A          245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY  319 (362)
T ss_dssp             HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence            111100000                  000000000001111122356789999999999999999999998754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=8.2e-37  Score=326.45  Aligned_cols=248  Identities=27%  Similarity=0.345  Sum_probs=190.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec--------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--------  414 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--------  414 (670)
                      .++|+..++||+|+||.||+|+...                  ....+.+|+.++++++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            3679999999999999999998642                  13478899999999999999999999976        


Q ss_pred             cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                      .+..++||||+++ +|.+.+.... ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  170 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL  170 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence            4468999999975 7777775543 359999999999999999999999   8999999999999999999999999999


Q ss_pred             ceeccCCC---cceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCc
Q 035655          495 ARLFDHGK---ISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQV  569 (670)
Q Consensus       495 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~  569 (670)
                      ++......   ........||+.|+|||++.+ ..++.++|||||||+++||++|+.||...... ........  .+..
T Consensus       171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~  248 (351)
T 3mi9_A          171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL--CGSI  248 (351)
T ss_dssp             CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH--HCCC
T ss_pred             cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH--hCCC
Confidence            98765322   122344578999999998876 45799999999999999999999999864322 11111111  1111


Q ss_pred             ccccCCCC---------------CCcccHH-----HHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          570 LDVVDPNL---------------GSSYVVA-----EMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       570 ~~~~d~~l---------------~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .....+..               .......     ....+.+++..||+.||.+|||++|++++-.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  314 (351)
T 3mi9_A          249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF  314 (351)
T ss_dssp             CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence            00000000               0000000     0245788999999999999999999999754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=3.1e-36  Score=324.36  Aligned_cols=241  Identities=26%  Similarity=0.378  Sum_probs=194.0

Q ss_pred             HHhhcCccccceEeeeCceeEEEeeccc------------------------hHHHHHHHHHHHhcc-ccCceeeeeeee
Q 035655          358 YTATKGFKQSEVIGTGGFGEVYKGVLPT------------------------RMREFAAEIESLGRL-RHKHLVNLQGWC  412 (670)
Q Consensus       358 ~~~t~~f~~~~~lG~G~fg~Vykg~~~~------------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~  412 (670)
                      ....++|+..+.||+|+||.||+|.+..                        ..+.+.+|+.+++++ +||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            3445779999999999999999997642                        034577999999999 799999999999


Q ss_pred             eccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       413 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                      ......++||||+++++|.+++...  ..+++..+..++.||+.||.|||+   .+++||||||+|||++.++.+||+||
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~Df  244 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDF  244 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEec
Confidence            9999999999999999999999654  369999999999999999999999   89999999999999999999999999


Q ss_pred             cCceeccCCCcceeeccccCcCCCCcccccc------CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhc
Q 035655          493 GLARLFDHGKISHTTNVVGTIGYIAPELART------GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHL  566 (670)
Q Consensus       493 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~  566 (670)
                      |++.......  ......||+.|+|||++.+      ..++.++|||||||++|||++|+.||........  ... ...
T Consensus       245 G~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~-i~~  319 (365)
T 2y7j_A          245 GFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM--LRM-IME  319 (365)
T ss_dssp             TTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-HHH
T ss_pred             CcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH--HHH-HHh
Confidence            9998765432  2344689999999998863      3578899999999999999999999976432111  111 111


Q ss_pred             CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       567 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      +..      .............+.+++..||+.||.+||+++|++++-
T Consensus       320 ~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp  361 (365)
T 2y7j_A          320 GQY------QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHP  361 (365)
T ss_dssp             TCC------CCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             CCC------CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence            110      000000011235678899999999999999999999863

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.8e-37  Score=334.57  Aligned_cols=240  Identities=11%  Similarity=0.033  Sum_probs=171.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc--ccCceeeee-------eee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL--RHKHLVNLQ-------GWC  412 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l--~H~nIv~l~-------g~~  412 (670)
                      ..+|...+.||+|+||.||+|.+..                   ..+.+.+|+.+++.|  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            4568999999999999999998642                   234566785555555  699988755       333


Q ss_pred             ecc-----------------CeeEEEEeccCCCCchhhcccCCccccCHHHH------HHHHHHHHHHhhhccccccceE
Q 035655          413 KRK-----------------RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR------FNIIKGIAAGLLYLHEEWEQVV  469 (670)
Q Consensus       413 ~~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qia~gL~yLH~~~~~~i  469 (670)
                      ...                 ...++||||++ |+|.+++..... .+.+..+      +.++.||+.||+|||+   ++|
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~i  215 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQS---KGL  215 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCC
Confidence            322                 34899999999 899999976532 4566667      7888999999999998   899


Q ss_pred             EecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCC
Q 035655          470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART--GKASCSTDVFAYGVLLLEIATGRR  547 (670)
Q Consensus       470 vHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~el~tG~~  547 (670)
                      +||||||+|||++.++.+||+|||+++....    ......+|+.|+|||++.+  ..++.++|||||||++|||++|+.
T Consensus       216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~  291 (371)
T 3q60_A          216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL  291 (371)
T ss_dssp             EETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999986543    2224567799999999987  679999999999999999999999


Q ss_pred             CCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          548 PIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       548 pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ||.........    ..............+...........+.+++..||+.||.+||++.|+++|
T Consensus       292 Pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          292 PFGLVTPGIKG----SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             STTBCCTTCTT----CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             CCCCcCccccc----chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            99764221100    000000001111111111112334667889999999999999999999874

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.8e-37  Score=322.25  Aligned_cols=240  Identities=24%  Similarity=0.385  Sum_probs=190.2

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ..++|++.+.||+|+||.||+|....                ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            45689999999999999999998753                34678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++++|.+++.... ..+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....... 
T Consensus        97 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  171 (302)
T 2j7t_A           97 FCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-  171 (302)
T ss_dssp             CCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-
T ss_pred             eCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc-
Confidence            999999999986533 359999999999999999999999   899999999999999999999999999975432111 


Q ss_pred             ceeeccccCcCCCCcccc-----ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          504 SHTTNVVGTIGYIAPELA-----RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~-----~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .......||+.|+|||++     ....++.++|||||||+++||++|+.||.......  .........      .+.. 
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~------~~~~-  242 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLLKIAKSD------PPTL-  242 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSC------CCCC-
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHHHhccC------Cccc-
Confidence            112335789999999988     36678999999999999999999999997643211  111111111      0111 


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                       ..+......+.+++..||+.||.+||++.|++++-
T Consensus       243 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~  277 (302)
T 2j7t_A          243 -LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP  277 (302)
T ss_dssp             -SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred             -CCccccCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence             11122235678899999999999999999999853

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-36  Score=328.23  Aligned_cols=242  Identities=23%  Similarity=0.331  Sum_probs=184.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR------  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------  416 (670)
                      .++|+..+.||+|+||.||+|....                  ..+.+.+|+++|++++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            5679999999999999999997632                  1356789999999999999999999997653      


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..++||||+ +++|.+++..   ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  176 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR  176 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence            469999999 8899999865   358999999999999999999999   899999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCc-----
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQV-----  569 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~-----  569 (670)
                      .....    .+...+|+.|+|||++.+ ..++.++||||+||+++||++|+.||...... .......  ..+..     
T Consensus       177 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~--~~g~~~~~~~  250 (367)
T 1cm8_A          177 QADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK--VTGTPPAEFV  250 (367)
T ss_dssp             ECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--HHCCCCHHHH
T ss_pred             ccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH--hcCCCCHHHH
Confidence            75432    334578999999999877 67999999999999999999999999864321 1111110  00000     


Q ss_pred             -----------ccccCCCCC---CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          570 -----------LDVVDPNLG---SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       570 -----------~~~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                                 ...+.....   ..........+.+++.+||+.||.+|||++|+++|-.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~  310 (367)
T 1cm8_A          251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY  310 (367)
T ss_dssp             HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChH
Confidence                       000000000   0111122356788999999999999999999999743

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.7e-36  Score=338.87  Aligned_cols=238  Identities=24%  Similarity=0.336  Sum_probs=192.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .++|+..++||+|+||.||++....                  ....+.+|+++|++++||||+++++++.+....++|+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            4679999999999999999997642                  2457889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec---CCCcEEEEeecCceecc
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID---ADMNARLGDFGLARLFD  499 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld---~~~~~kL~DFGla~~~~  499 (670)
                      ||+++|+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++   .++.+||+|||+++...
T Consensus       101 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A          101 ELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            999999999998654  358999999999999999999999   8999999999999995   45679999999998665


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ...  ......||+.|+|||++.+ .++.++|||||||++|||++|+.||........  .... ..+..      ....
T Consensus       176 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i-~~~~~------~~~~  243 (486)
T 3mwu_A          176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI--LKRV-ETGKY------AFDL  243 (486)
T ss_dssp             CC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH-HHTCC------CSCS
T ss_pred             CCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHH-HhCCC------CCCC
Confidence            432  2344579999999999875 589999999999999999999999976432211  1111 11111      0111


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .........+.+++..||+.||.+|||+.|+++|-+
T Consensus       244 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~  279 (486)
T 3mwu_A          244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW  279 (486)
T ss_dssp             GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred             cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence            111223456789999999999999999999999743

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=9.2e-37  Score=340.72  Aligned_cols=238  Identities=25%  Similarity=0.351  Sum_probs=194.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||++....                   ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            4578999999999999999997642                   346788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe---cCCCcEEEEeecCceec
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLF  498 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl---d~~~~~kL~DFGla~~~  498 (670)
                      +||+++|+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++..
T Consensus       105 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  179 (484)
T 3nyv_A          105 GEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF  179 (484)
T ss_dssp             ECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred             EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence            9999999999998654  359999999999999999999999   899999999999999   56789999999999876


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ....  ......||+.|+|||++.+ .++.++|||||||++|||++|+.||........  .... ..+..      ...
T Consensus       180 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i-~~~~~------~~~  247 (484)
T 3nyv_A          180 EASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI--LKKV-EKGKY------TFE  247 (484)
T ss_dssp             CCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH-HHCCC------CCC
T ss_pred             cccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH--HHHH-HcCCC------CCC
Confidence            5433  2344579999999999875 689999999999999999999999986432211  1111 11111      011


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..........+.+++..||+.||.+|||++|+++|-+
T Consensus       248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~  284 (484)
T 3nyv_A          248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW  284 (484)
T ss_dssp             SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred             CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence            1112233456788999999999999999999998654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=9.5e-37  Score=317.44  Aligned_cols=240  Identities=24%  Similarity=0.421  Sum_probs=184.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeec-----------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKR-----------  414 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-----------  414 (670)
                      .++|+..+.||+|+||.||+|....               ..+.+.+|+.++++++||||+++++++.+           
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            4678999999999999999998642               24678899999999999999999998754           


Q ss_pred             --cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEee
Q 035655          415 --KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF  492 (670)
Q Consensus       415 --~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DF  492 (670)
                        .+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+   .+++||||||+|||++.++.+||+||
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~df  160 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDF  160 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEeeC
Confidence              456899999999999999997643 468899999999999999999999   89999999999999999999999999


Q ss_pred             cCceeccCCC-------------cceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHH
Q 035655          493 GLARLFDHGK-------------ISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVD  558 (670)
Q Consensus       493 Gla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~  558 (670)
                      |+++......             ........||+.|+|||++.+. .++.++|||||||++|||++   ||.... ....
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-~~~~  236 (303)
T 1zy4_A          161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-ERVN  236 (303)
T ss_dssp             CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHHH
T ss_pred             cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-hHHH
Confidence            9998654321             1122345789999999998764 78999999999999999998   554311 1111


Q ss_pred             HHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          559 WVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       559 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .......       ....+...+.......+.+++..||+.||.+||++++++++-+
T Consensus       237 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~  286 (303)
T 1zy4_A          237 ILKKLRS-------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGW  286 (303)
T ss_dssp             HHHHHHS-------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSC
T ss_pred             HHHhccc-------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCC
Confidence            1111111       1111222233344466788999999999999999999998543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=3.1e-36  Score=338.25  Aligned_cols=239  Identities=24%  Similarity=0.344  Sum_probs=192.4

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-----------------------------hHHHHHHHHHHHhccccCceeeeee
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-----------------------------RMREFAAEIESLGRLRHKHLVNLQG  410 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-----------------------------~~~~f~~Ei~~L~~l~H~nIv~l~g  410 (670)
                      ..++|...++||+|+||.||+|....                             ..+.+.+|+.+|++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            45789999999999999999997532                             1346789999999999999999999


Q ss_pred             eeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC---cE
Q 035655          411 WCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM---NA  487 (670)
Q Consensus       411 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~---~~  487 (670)
                      +|.+....++||||+++|+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++   .+
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~  188 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNI  188 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSE
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccE
Confidence            999999999999999999999998654  359999999999999999999999   8999999999999998776   69


Q ss_pred             EEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcC
Q 035655          488 RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG  567 (670)
Q Consensus       488 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~  567 (670)
                      ||+|||+++......  ......||+.|+|||++. +.++.++||||+||++|||++|+.||.......  ...... .+
T Consensus       189 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~-~~  262 (504)
T 3q5i_A          189 KIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD--IIKKVE-KG  262 (504)
T ss_dssp             EECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH-HC
T ss_pred             EEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH-cC
Confidence            999999998775532  234457999999999987 568999999999999999999999998643221  111111 11


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..      .............+.+++..||+.||.+|||++|+++|-+
T Consensus       263 ~~------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~  304 (504)
T 3q5i_A          263 KY------YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW  304 (504)
T ss_dssp             CC------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             CC------CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence            11      0000011122356788999999999999999999998754

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=6.7e-37  Score=337.06  Aligned_cols=184  Identities=27%  Similarity=0.388  Sum_probs=155.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----Ce
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----RD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~  417 (670)
                      .++|...+.||+|+||.||+|+...                  ..+.+.+|+++|++++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            5689999999999999999997643                  235788999999999999999999999766     57


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .|+||||++ |+|.+++...  ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence            999999986 6999999654  459999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCc---------------------ceeeccccCcCCCCcccc-ccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 035655          498 FDHGKI---------------------SHTTNVVGTIGYIAPELA-RTGKASCSTDVFAYGVLLLEIATGRRPID  550 (670)
Q Consensus       498 ~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~t~ksDV~S~Gvvl~el~tG~~pf~  550 (670)
                      ......                     ...+..+||+.|+|||++ ....++.++|||||||+++||++|..||.
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            654321                     123556899999999986 55679999999999999999998655543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.6e-37  Score=357.09  Aligned_cols=240  Identities=23%  Similarity=0.369  Sum_probs=191.7

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      ..++|+..+.||+|+||.||+|....                    ..+.|.+|+.++++++||||+++++++.+ +..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence            34678889999999999999997532                    13678899999999999999999999854 5689


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||||+++|+|.+++.... ..+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       467 lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~  542 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  542 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred             EEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence            9999999999999997543 468999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......  ...... .+..     +.. 
T Consensus       543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~i~-~~~~-----~~~-  613 (656)
T 2j0j_A          543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIE-NGER-----LPM-  613 (656)
T ss_dssp             C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHH-HTCC-----CCC-
T ss_pred             CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHH-cCCC-----CCC-
Confidence            544333344567889999999998999999999999999999997 999997643221  111111 1111     111 


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                         +......+.+++..||+.||.+||++.++++.|+.
T Consensus       614 ---~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~  648 (656)
T 2j0j_A          614 ---PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  648 (656)
T ss_dssp             ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence               11223567889999999999999999999999874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.8e-36  Score=319.78  Aligned_cols=250  Identities=24%  Similarity=0.329  Sum_probs=194.1

Q ss_pred             HhhcCccccceEeeeCceeEEEeecc-c------------------hHHHHHHHHHHHhcc---ccCceeeeeeeee---
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLP-T------------------RMREFAAEIESLGRL---RHKHLVNLQGWCK---  413 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~-~------------------~~~~f~~Ei~~L~~l---~H~nIv~l~g~~~---  413 (670)
                      .+.++|+..+.||+|+||.||++... .                  ....+.+|+.+++++   +||||++++++|.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            45678999999999999999999863 1                  113577888888777   8999999999987   


Q ss_pred             --ccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEe
Q 035655          414 --RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD  491 (670)
Q Consensus       414 --~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~D  491 (670)
                        .....++|+||++ |+|.+++.......+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECS
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEec
Confidence              5567899999997 699999987666679999999999999999999999   8999999999999999999999999


Q ss_pred             ecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcC---
Q 035655          492 FGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLG---  567 (670)
Q Consensus       492 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~---  567 (670)
                      ||+++......  ......||+.|+|||++.+..++.++|||||||+++||++|+.||...... ............   
T Consensus       164 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  241 (326)
T 1blx_A          164 FGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE  241 (326)
T ss_dssp             CCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred             CcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence            99998654322  233457899999999999999999999999999999999999999864321 111111110000   


Q ss_pred             Ccc-------cccC---CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          568 QVL-------DVVD---PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       568 ~~~-------~~~d---~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...       ....   ......+.......+.+++..||+.||.+||++.|++++-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  298 (326)
T 1blx_A          242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP  298 (326)
T ss_dssp             GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence            000       0000   0000111122345678899999999999999999999763

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.7e-36  Score=325.47  Aligned_cols=243  Identities=21%  Similarity=0.274  Sum_probs=182.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR------  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------  416 (670)
                      .++|+..+.||+|+||.||+|....                  ..+.+.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            4689999999999999999997532                  2356789999999999999999999997654      


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..++||||++ |+|.+++.    ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       104 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  175 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  175 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred             ceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence            7899999997 57888874    248999999999999999999999   899999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc-----
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD-----  571 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~-----  571 (670)
                      ......  ......||+.|+|||++.+..++.++|||||||+++||++|+.||....... .+.......+....     
T Consensus       176 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~  252 (371)
T 2xrw_A          176 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKK  252 (371)
T ss_dssp             ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHHTT
T ss_pred             cccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHH
Confidence            654322  2334579999999999999999999999999999999999999997643211 11111000000000     


Q ss_pred             ---------ccCCCC----------------CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          572 ---------VVDPNL----------------GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       572 ---------~~d~~l----------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                               .-.+..                ...........+.+++.+||+.||.+|||++|+++|-
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  320 (371)
T 2xrw_A          253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  320 (371)
T ss_dssp             SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence                     000000                0111223456789999999999999999999999975

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=2.3e-36  Score=336.68  Aligned_cols=243  Identities=19%  Similarity=0.244  Sum_probs=193.6

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhcccc-CceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRH-KHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H-~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|++.++||+|+||.||+|....              ...++..|+++++.|+| +++..+..++.+.+..++||||+
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            4679999999999999999998642              23468899999999987 55666666677788899999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe---cCCCcEEEEeecCceeccCCC
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl---d~~~~~kL~DFGla~~~~~~~  502 (670)
                       +++|.+++.... ..+++.+++.++.||+.||.|||+   .+|+||||||+||||   +.++.+||+|||+++......
T Consensus        86 -g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           86 -GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             -CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence             999999997543 369999999999999999999999   899999999999999   688999999999998776543


Q ss_pred             cc------eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-h---HHHHHHHhhcCCcccc
Q 035655          503 IS------HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-L---VDWVLEFQHLGQVLDV  572 (670)
Q Consensus       503 ~~------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~---~~~~~~~~~~~~~~~~  572 (670)
                      ..      ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .   ............. +.
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-~~  239 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI-EA  239 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH-HH
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH-HH
Confidence            21      123568999999999999999999999999999999999999999763221 1   1111111111111 11


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      +.        ......+.+++..||+.+|.+||++++|++.|+..
T Consensus       240 l~--------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          240 LC--------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HH--------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             Hh--------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            11        11235688999999999999999999999988653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=3.7e-36  Score=313.20  Aligned_cols=239  Identities=23%  Similarity=0.363  Sum_probs=193.8

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-------------------------hHHHHHHHHHHHhccc-cCceeeeeeeee
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-------------------------RMREFAAEIESLGRLR-HKHLVNLQGWCK  413 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~  413 (670)
                      ..++|+..+.||+|+||.||+|....                         ..+.+.+|++++++++ ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            35789999999999999999997643                         1245779999999996 999999999999


Q ss_pred             ccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       414 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      ..+..++||||+++++|.+++...  ..+++.++..++.||+.||.|||+   .+++||||||+||+++.++.+||+|||
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg  169 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG  169 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             cCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEeccc
Confidence            999999999999999999999654  468999999999999999999998   899999999999999999999999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccc------cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcC
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELAR------TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG  567 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~  567 (670)
                      ++.......  ......||+.|+|||++.      ...++.++||||||++++||++|+.||........  .... ..+
T Consensus       170 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~-~~~  244 (298)
T 1phk_A          170 FSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM--LRMI-MSG  244 (298)
T ss_dssp             TCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH-HHT
T ss_pred             chhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH--HHHH-hcC
Confidence            998765433  233457899999999875      45688999999999999999999999976432211  1111 111


Q ss_pred             CcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       568 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ..      .............+.+++..||+.||.+||++.|++++-
T Consensus       245 ~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~  285 (298)
T 1phk_A          245 NY------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP  285 (298)
T ss_dssp             CC------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred             Cc------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhCh
Confidence            11      011111122345688999999999999999999999754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=4.9e-36  Score=319.49  Aligned_cols=244  Identities=19%  Similarity=0.241  Sum_probs=192.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCc------eeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKH------LVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~n------Iv~l~g~~~~~~~~  418 (670)
                      .++|+..+.||+|+||.||++....                ..+.+.+|+.++++++|++      ++.+.+++...+..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            4689999999999999999997532                2356778999999998876      99999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe-----------------
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI-----------------  481 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl-----------------  481 (670)
                      ++||||+ +++|.+++.......+++.+++.++.||+.||+|||+   .+|+||||||+|||+                 
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccccc
Confidence            9999999 6788888876655679999999999999999999998   899999999999999                 


Q ss_pred             --cCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HH
Q 035655          482 --DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VD  558 (670)
Q Consensus       482 --d~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~  558 (670)
                        +.++.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||+++||++|+.||....... ..
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  249 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV  249 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             cccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence              66889999999999865432    234579999999999999999999999999999999999999998643221 11


Q ss_pred             HHHHHhhcCCccc----------c-cC-------------------CCCC--CcccHHHHHHHHHHHHhhccCCCCCCCC
Q 035655          559 WVLEFQHLGQVLD----------V-VD-------------------PNLG--SSYVVAEMELVLQLGLLCSHQKAEARPT  606 (670)
Q Consensus       559 ~~~~~~~~~~~~~----------~-~d-------------------~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs  606 (670)
                      .....  .+....          . ..                   +.+.  ......+...+.+++..||+.||.+|||
T Consensus       250 ~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  327 (355)
T 2eu9_A          250 MMEKI--LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT  327 (355)
T ss_dssp             HHHHH--HCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHH--cCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence            11110  000000          0 00                   0000  0111233557889999999999999999


Q ss_pred             HHHHHHHh
Q 035655          607 MRQVLRYL  614 (670)
Q Consensus       607 ~~evl~~L  614 (670)
                      ++|++++-
T Consensus       328 ~~e~l~hp  335 (355)
T 2eu9_A          328 LAEALLHP  335 (355)
T ss_dssp             HHHHTTSG
T ss_pred             HHHHhcCh
Confidence            99998753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.3e-36  Score=326.90  Aligned_cols=253  Identities=24%  Similarity=0.315  Sum_probs=192.6

Q ss_pred             hHHHhhcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeecc---
Q 035655          356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK---  415 (670)
Q Consensus       356 ~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~---  415 (670)
                      +.....++|+..+.||+|+||.||++....                 ..+.+.+|++++++++||||+++++++...   
T Consensus        21 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  100 (364)
T 3qyz_A           21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE  100 (364)
T ss_dssp             CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT
T ss_pred             EeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc
Confidence            333446789999999999999999997542                 236788999999999999999999998654   


Q ss_pred             --CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          416 --RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       416 --~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                        ...++|+||++ |+|.+++..   ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||
T Consensus       101 ~~~~~~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg  173 (364)
T 3qyz_A          101 QMKDVYIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFG  173 (364)
T ss_dssp             TCCCEEEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             ccceEEEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCc
Confidence              46899999997 599998854   358999999999999999999999   899999999999999999999999999


Q ss_pred             CceeccCCCcc--eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhcCCc
Q 035655          494 LARLFDHGKIS--HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHLGQV  569 (670)
Q Consensus       494 la~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~~~~  569 (670)
                      +++........  ......||+.|+|||++.+ ..++.++|||||||+++||++|+.||..... ...............
T Consensus       174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  253 (364)
T 3qyz_A          174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ  253 (364)
T ss_dssp             TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCH
T ss_pred             ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            99876543211  1234589999999998654 4589999999999999999999999976432 111111110000000


Q ss_pred             ---------------ccccCCCCC--CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          570 ---------------LDVVDPNLG--SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       570 ---------------~~~~d~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                                     .....+...  ..........+.+++..||+.||.+|||++|+++|-.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  316 (364)
T 3qyz_A          254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY  316 (364)
T ss_dssp             HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence                           000000000  0011112356789999999999999999999999754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.1e-35  Score=321.98  Aligned_cols=192  Identities=21%  Similarity=0.309  Sum_probs=164.7

Q ss_pred             hhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccc-cC-----ceeeeeeeee
Q 035655          355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLR-HK-----HLVNLQGWCK  413 (670)
Q Consensus       355 ~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~-H~-----nIv~l~g~~~  413 (670)
                      ..-....++|+..+.||+|+||.||+|....               ...++..|+.+++.++ |+     +|+++++++.
T Consensus        47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  126 (382)
T 2vx3_A           47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM  126 (382)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred             ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence            3344456899999999999999999997643               1356678899988885 44     4999999999


Q ss_pred             ccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec--CCCcEEEEe
Q 035655          414 RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID--ADMNARLGD  491 (670)
Q Consensus       414 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld--~~~~~kL~D  491 (670)
                      ..+..++||||++ |+|.+++.......+++..+..++.|++.||.|||+. +.+|+||||||+|||++  .++.+||+|
T Consensus       127 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D  204 (382)
T 2vx3_A          127 FRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD  204 (382)
T ss_dssp             ETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred             cCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence            9999999999996 5999999876655799999999999999999999951 27899999999999994  577899999


Q ss_pred             ecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 035655          492 FGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSD  552 (670)
Q Consensus       492 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~  552 (670)
                      ||+++.....    .....||+.|+|||++.+..++.++|||||||+++||++|+.||...
T Consensus       205 FG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          205 FGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             CTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            9999876442    23457899999999999999999999999999999999999999864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=7.4e-37  Score=335.50  Aligned_cols=248  Identities=24%  Similarity=0.294  Sum_probs=186.3

Q ss_pred             cCccccceEeeeCceeEEEeeccch------------HHHHHHHHHHHhccccCceeeeeeeeecc------CeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRLRHKHLVNLQGWCKRK------RDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~~~~lV~E  423 (670)
                      .+|+..+.||+|+||.||+|++...            .+.+.+|+++|++++||||++++++|...      ..+++|||
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e  133 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD  133 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence            4588899999999999999987541            23345799999999999999999998532      23689999


Q ss_pred             ccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-CcEEEEeecCceeccC
Q 035655          424 YIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDH  500 (670)
Q Consensus       424 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-~~~kL~DFGla~~~~~  500 (670)
                      |+++ +|.+.+..  .....+++..+..++.||++||+|||+   .+|+||||||+|||++.+ +.+||+|||+++....
T Consensus       134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~  209 (420)
T 1j1b_A          134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR  209 (420)
T ss_dssp             CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence            9975 66666543  223569999999999999999999998   899999999999999965 5689999999987654


Q ss_pred             CCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch--hHHHHHHHh---------hcCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI--LVDWVLEFQ---------HLGQ  568 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--~~~~~~~~~---------~~~~  568 (670)
                      ..  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......  +........         ....
T Consensus       210 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~  287 (420)
T 1j1b_A          210 GE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN  287 (420)
T ss_dssp             TC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSC
T ss_pred             CC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChh
Confidence            33  22345789999999998765 7899999999999999999999999864321  111111100         0011


Q ss_pred             cccccCCCCCCc-----ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          569 VLDVVDPNLGSS-----YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       569 ~~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..+...+.+...     +.......+.+|+.+||+.||.+||++.|+++|-.
T Consensus       288 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~  339 (420)
T 1j1b_A          288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF  339 (420)
T ss_dssp             CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence            111111111111     11222467889999999999999999999998754

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=6.7e-37  Score=332.99  Aligned_cols=248  Identities=21%  Similarity=0.279  Sum_probs=185.9

Q ss_pred             cCccccceEeeeCceeEEEeeccch-----------HHHHHHHHHHHhccccCceeeeeeeeeccC------eeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR-----------MREFAAEIESLGRLRHKHLVNLQGWCKRKR------DLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~-----------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------~~~lV~E~  424 (670)
                      .+|...+.||+|+||.||+|.....           .+...+|++++++++||||++++++|...+      ..++||||
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~  119 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY  119 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence            4688999999999999999987542           222347999999999999999999996543      38899999


Q ss_pred             cCCCCchhhccc-CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec-CCCcEEEEeecCceeccCCC
Q 035655          425 IPNGSLDSLLFD-NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID-ADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       425 ~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld-~~~~~kL~DFGla~~~~~~~  502 (670)
                      ++++.+...... .....+++..+..++.||+.||+|||+   .+|+||||||+|||++ .++.+||+|||+++......
T Consensus       120 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~  196 (394)
T 4e7w_A          120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE  196 (394)
T ss_dssp             CSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             cCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence            987544433221 223469999999999999999999999   8999999999999999 79999999999998765433


Q ss_pred             cceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch--hHHHHHHH---------hhcCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI--LVDWVLEF---------QHLGQVL  570 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--~~~~~~~~---------~~~~~~~  570 (670)
                        ......||+.|+|||++.+. .++.++|||||||+++||++|+.||......  +.......         .......
T Consensus       197 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~  274 (394)
T 4e7w_A          197 --PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM  274 (394)
T ss_dssp             --CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred             --CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence              22345789999999998765 5899999999999999999999999864321  11111100         0000111


Q ss_pred             cccCCCCCC-----cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          571 DVVDPNLGS-----SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       571 ~~~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ...-+....     .+.......+.+++.+||+.||.+||++.|+++|-
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  323 (394)
T 4e7w_A          275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHP  323 (394)
T ss_dssp             SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred             hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcCh
Confidence            111111110     11112345788999999999999999999999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=2.7e-36  Score=320.97  Aligned_cols=244  Identities=23%  Similarity=0.269  Sum_probs=166.9

Q ss_pred             hhcCccccc-eEeeeCceeEEEeeccch-----------HHHHHHHH-HHHhccccCceeeeeeeeec----cCeeEEEE
Q 035655          360 ATKGFKQSE-VIGTGGFGEVYKGVLPTR-----------MREFAAEI-ESLGRLRHKHLVNLQGWCKR----KRDLLLVY  422 (670)
Q Consensus       360 ~t~~f~~~~-~lG~G~fg~Vykg~~~~~-----------~~~f~~Ei-~~L~~l~H~nIv~l~g~~~~----~~~~~lV~  422 (670)
                      ..++|...+ .||+|+||.||+|.....           .....+|+ ..++.++||||+++++++..    +...++||
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~  105 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM  105 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence            356788854 699999999999987631           12333444 34667799999999999876    45589999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC---CcEEEEeecCceecc
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---MNARLGDFGLARLFD  499 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~---~~~kL~DFGla~~~~  499 (670)
                      ||+++|+|.+++.......+++.+++.++.||+.||.|||+   .+|+||||||+|||++.+   +.+||+|||+++...
T Consensus       106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~  182 (336)
T 3fhr_A          106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT  182 (336)
T ss_dssp             ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred             eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence            99999999999987766679999999999999999999999   899999999999999864   459999999998665


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHHhhcCCcccccCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW-VLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~-~~~~~~~~~~~~~~d~~l~  578 (670)
                      ..   ......||+.|+|||++.+..++.++|||||||+++||++|+.||.......... ........      .....
T Consensus       183 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------~~~~~  253 (336)
T 3fhr_A          183 QN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG------QYGFP  253 (336)
T ss_dssp             ------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------CCC
T ss_pred             cc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc------ccccC
Confidence            32   2334578999999999988889999999999999999999999997532211100 00000000      00111


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..........+.+++..||+.||.+||+++|++++-+
T Consensus       254 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  290 (336)
T 3fhr_A          254 NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW  290 (336)
T ss_dssp             TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred             chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence            1111223456788999999999999999999999643

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.4e-36  Score=325.55  Aligned_cols=244  Identities=22%  Similarity=0.326  Sum_probs=172.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc------C
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK------R  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~  416 (670)
                      .++|+..+.||+|+||.||+|....                  ..+.+.+|+++|++++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            4789999999999999999997532                  235678999999999999999999998654      5


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ..++|+|++ +++|.+++..   ..+++..+..++.||++||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~  180 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR  180 (367)
T ss_dssp             CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred             eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence            689999999 7899999854   369999999999999999999998   899999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcC------C
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLG------Q  568 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~------~  568 (670)
                      .....    .+...||+.|+|||++.+ ..++.++|||||||+++||++|+.||...... ............      .
T Consensus       181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~  256 (367)
T 2fst_X          181 HTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK  256 (367)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred             ccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            65432    344579999999999876 67899999999999999999999999764321 111111110000      0


Q ss_pred             --------cccccCCCCCCcc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          569 --------VLDVVDPNLGSSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       569 --------~~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                              ....+...-...+   .......+.+++.+||+.||.+|||++|+++|-.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~  314 (367)
T 2fst_X          257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY  314 (367)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence                    0000000000000   0112356788999999999999999999999754

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=5.7e-37  Score=322.20  Aligned_cols=248  Identities=21%  Similarity=0.327  Sum_probs=189.0

Q ss_pred             ccchhhHHHhhcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhcccc--Cceeeeeee
Q 035655          351 RFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRH--KHLVNLQGW  411 (670)
Q Consensus       351 ~~~~~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H--~nIv~l~g~  411 (670)
                      .+.++.+....++|+..+.||+|+||.||++....                 ..+.+.+|++++++++|  |||++++++
T Consensus        17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            34455555567789999999999999999997643                 23678899999999974  999999999


Q ss_pred             eeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEe
Q 035655          412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD  491 (670)
Q Consensus       412 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~D  491 (670)
                      +...+..++||| +.+++|.+++...  ..+++.+++.++.|+++||.|||+   .+|+||||||+|||++ ++.+||+|
T Consensus        97 ~~~~~~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~-~~~~kL~D  169 (313)
T 3cek_A           97 EITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLID  169 (313)
T ss_dssp             EECSSEEEEEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECC
T ss_pred             eecCCEEEEEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEE-CCeEEEee
Confidence            999999999999 5688999999765  368999999999999999999999   8999999999999996 48999999


Q ss_pred             ecCceeccCCCcc-eeeccccCcCCCCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHH
Q 035655          492 FGLARLFDHGKIS-HTTNVVGTIGYIAPELART-----------GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW  559 (670)
Q Consensus       492 FGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~  559 (670)
                      ||+++........ ......||+.|+|||++.+           ..++.++|||||||+++||++|+.||..........
T Consensus       170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  249 (313)
T 3cek_A          170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL  249 (313)
T ss_dssp             CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH
T ss_pred             ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH
Confidence            9999876543321 2234579999999999865           468889999999999999999999997533221111


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                       ...         .++.....++......+.+++..||+.||.+||+++|++++-.
T Consensus       250 -~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~  295 (313)
T 3cek_A          250 -HAI---------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY  295 (313)
T ss_dssp             -HHH---------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             -HHH---------HhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence             111         1111111111112356788999999999999999999998654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=3e-36  Score=349.19  Aligned_cols=235  Identities=22%  Similarity=0.286  Sum_probs=194.2

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~  419 (670)
                      ..++|+..+.||+|+||.||++....                   ..+.+..|..+|..+ +||||+++++++.+.+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            35679999999999999999998643                   234577899999988 6999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||||+++|+|.+++...  ..+++.+++.++.||+.||.|||+   .+|+||||||+||||+.++.+||+|||+++...
T Consensus       419 lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~  493 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  493 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred             EEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence            999999999999999764  359999999999999999999999   899999999999999999999999999998643


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  .... ....      .    
T Consensus       494 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~--~~~i-~~~~------~----  559 (674)
T 3pfq_A          494 WDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSI-MEHN------V----  559 (674)
T ss_dssp             CTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH-HSSC------C----
T ss_pred             cCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH--HHHH-HhCC------C----
Confidence            322 234556899999999999999999999999999999999999999986432211  1111 1111      1    


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCH-----HHHHHH
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTM-----RQVLRY  613 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  613 (670)
                      .++......+.+++..||+.||.+||++     +||++|
T Consensus       560 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          560 AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence            1122233567889999999999999997     888775

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=9.5e-36  Score=317.94  Aligned_cols=249  Identities=21%  Similarity=0.273  Sum_probs=189.2

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----Ce
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----RD  417 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~  417 (670)
                      ..++|+..+.||+|+||.||+|....                 ....+.+|++++++++||||+++++++...     ..
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            35789999999999999999997642                 235677999999999999999999988754     67


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++|+||++ |+|.+++..   ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        89 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence            899999997 699998865   358999999999999999999999   8999999999999999999999999999987


Q ss_pred             ccCCCcc---------eeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-HHHHHHhhc
Q 035655          498 FDHGKIS---------HTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-DWVLEFQHL  566 (670)
Q Consensus       498 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~~~~~~~~~  566 (670)
                      .......         ......||+.|+|||++.+ ..++.++|||||||+++||++|+.||........ .........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  241 (353)
T 2b9h_A          162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT  241 (353)
T ss_dssp             CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence            6543211         1223478999999998764 6789999999999999999999999986432111 111110000


Q ss_pred             CC---ccccc-----------CCCCC----CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          567 GQ---VLDVV-----------DPNLG----SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       567 ~~---~~~~~-----------d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ..   .....           -+...    ..........+.+++.+||+.||.+||+++|++++-.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  308 (353)
T 2b9h_A          242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY  308 (353)
T ss_dssp             CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence            00   00000           00000    0001122356788999999999999999999999654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=4.8e-36  Score=322.53  Aligned_cols=247  Identities=21%  Similarity=0.299  Sum_probs=192.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccc-----------cCceeeeeeeeec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLR-----------HKHLVNLQGWCKR  414 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~-----------H~nIv~l~g~~~~  414 (670)
                      .++|...+.||+|+||.||+|....               ..+.+.+|+.++++++           ||||+++++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            3579999999999999999998633               2356789999999887           8999999999986


Q ss_pred             cC----eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccc-eEEecccCCCcEEec------C
Q 035655          415 KR----DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ-VVIHRDVKSGNVLID------A  483 (670)
Q Consensus       415 ~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~ivHrDIkp~NILld------~  483 (670)
                      .+    ..++||||+ +++|.+++.......+++..+..++.||+.||+|||+   + +|+||||||+|||++      .
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~  173 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPEN  173 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTT
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcC
Confidence            54    789999999 8999999987666679999999999999999999998   7 999999999999994      4


Q ss_pred             CCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch----hHHH
Q 035655          484 DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI----LVDW  559 (670)
Q Consensus       484 ~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~----~~~~  559 (670)
                      .+.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||+++||++|+.||......    ..+.
T Consensus       174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  249 (373)
T 1q8y_A          174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  249 (373)
T ss_dssp             EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence            458999999999876542    23447899999999999999999999999999999999999999753211    0000


Q ss_pred             HHHH-hhcCCc--------------------ccccCC-CC---------CCcccHHHHHHHHHHHHhhccCCCCCCCCHH
Q 035655          560 VLEF-QHLGQV--------------------LDVVDP-NL---------GSSYVVAEMELVLQLGLLCSHQKAEARPTMR  608 (670)
Q Consensus       560 ~~~~-~~~~~~--------------------~~~~d~-~l---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  608 (670)
                      .... ...+..                    ...+.. ..         ...++......+.+++..||+.||.+|||++
T Consensus       250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  329 (373)
T 1q8y_A          250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  329 (373)
T ss_dssp             HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence            0000 000000                    000000 00         0123456678899999999999999999999


Q ss_pred             HHHHHhc
Q 035655          609 QVLRYLN  615 (670)
Q Consensus       609 evl~~L~  615 (670)
                      |+++|-.
T Consensus       330 ell~hp~  336 (373)
T 1q8y_A          330 GLVNHPW  336 (373)
T ss_dssp             HHHTCGG
T ss_pred             HHhhChh
Confidence            9999654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=7.3e-36  Score=322.05  Aligned_cols=243  Identities=21%  Similarity=0.315  Sum_probs=185.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee----
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL----  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~----  418 (670)
                      .++|...+.||+|+||.||+|....                  ..+.+.+|+.++++++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            4688999999999999999997543                  136788999999999999999999999877654    


Q ss_pred             --EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          419 --LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       419 --~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                        ++||||++ ++|.+++.    ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  192 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR  192 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred             eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence              99999997 68888873    348999999999999999999999   899999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcC-------
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLG-------  567 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~-------  567 (670)
                      .....    .....||+.|+|||++.+ ..++.++|||||||+++||++|+.||...... ............       
T Consensus       193 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  268 (371)
T 4exu_A          193 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK  268 (371)
T ss_dssp             -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred             ccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence            65432    334578999999999877 67899999999999999999999999864321 111110000000       


Q ss_pred             -------CcccccCCCCCCc---ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          568 -------QVLDVVDPNLGSS---YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       568 -------~~~~~~d~~l~~~---~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                             .............   ........+.+++..||+.||.+||+++|++++-.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  326 (371)
T 4exu_A          269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF  326 (371)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence                   0000000000001   11122467889999999999999999999999754

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=2.8e-36  Score=318.94  Aligned_cols=241  Identities=25%  Similarity=0.342  Sum_probs=169.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHH-HHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIE-SLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~-~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .++|+..+.||+|+||.||++....                 ...++..|+. +++.++||||+++++++...+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            4678899999999999999998742                 2234556665 778889999999999999999999999


Q ss_pred             eccCCCCchhhccc---CCccccCHHHHHHHHHHHHHHhhhccccccc-eEEecccCCCcEEecCCCcEEEEeecCceec
Q 035655          423 DYIPNGSLDSLLFD---NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ-VVIHRDVKSGNVLIDADMNARLGDFGLARLF  498 (670)
Q Consensus       423 E~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~ivHrDIkp~NILld~~~~~kL~DFGla~~~  498 (670)
                      ||+++ +|.+++..   .....+++..+..++.|++.||.|||+   . +++||||||+|||++.++.+||+|||+++..
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99985 88877753   224578999999999999999999998   7 9999999999999999999999999999866


Q ss_pred             cCCCcceeeccccCcCCCCcccc----ccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELA----RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ....  ......||+.|+|||++    .+..++.++|||||||+++||++|+.||.......       ...........
T Consensus       177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~~~~  247 (327)
T 3aln_A          177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-------DQLTQVVKGDP  247 (327)
T ss_dssp             -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCC
T ss_pred             cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-------HHHHHHhcCCC
Confidence            4432  22334799999999998    45678999999999999999999999997532110       01111111112


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      +.+...........+.+++..||+.||.+||++.|++++-
T Consensus       248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp  287 (327)
T 3aln_A          248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHP  287 (327)
T ss_dssp             CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred             CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhCh
Confidence            2222211122345678899999999999999999998853

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=3.7e-36  Score=321.95  Aligned_cols=255  Identities=20%  Similarity=0.244  Sum_probs=181.6

Q ss_pred             hhHHHhhcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe--
Q 035655          355 SDLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD--  417 (670)
Q Consensus       355 ~~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~--  417 (670)
                      .+.....++|+..+.||+|+||.||+|....               ....+.+|++.++.++||||+++++++...+.  
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            3455667899999999999999999998643               23467788899999999999999999965433  


Q ss_pred             -----eEEEEeccCCCCchhhccc--CCccccCHHHHHHHHHHHHHHhhhcc--ccccceEEecccCCCcEEecC-CCcE
Q 035655          418 -----LLLVYDYIPNGSLDSLLFD--NENFVLSWEQRFNIIKGIAAGLLYLH--EEWEQVVIHRDVKSGNVLIDA-DMNA  487 (670)
Q Consensus       418 -----~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH--~~~~~~ivHrDIkp~NILld~-~~~~  487 (670)
                           .++||||+++ +|.+.+..  .....+++..+..++.|++.||.|||  +   .+|+||||||+|||++. ++.+
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~  171 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTL  171 (360)
T ss_dssp             TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEE
T ss_pred             ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcE
Confidence                 8999999986 55444432  23456899999999999999999999  7   89999999999999997 8999


Q ss_pred             EEEeecCceeccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhh
Q 035655          488 RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQH  565 (670)
Q Consensus       488 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~  565 (670)
                      ||+|||+++......  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..........
T Consensus       172 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  249 (360)
T 3e3p_A          172 KLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG  249 (360)
T ss_dssp             EECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             EEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC
Confidence            999999998765433  23345789999999998655 4899999999999999999999999864322 1111111000


Q ss_pred             c--CCcccccCCCC----------------CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          566 L--GQVLDVVDPNL----------------GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       566 ~--~~~~~~~d~~l----------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      .  .......++..                ...........+.+++..||+.||.+|||+.|+++|-+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  317 (360)
T 3e3p_A          250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY  317 (360)
T ss_dssp             CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGG
T ss_pred             CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcc
Confidence            0  00000001100                00111123567889999999999999999999999754

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.2e-36  Score=329.97  Aligned_cols=249  Identities=24%  Similarity=0.298  Sum_probs=172.6

Q ss_pred             ccc-cceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeee--ccCeeEEEEec
Q 035655          364 FKQ-SEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCK--RKRDLLLVYDY  424 (670)
Q Consensus       364 f~~-~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~--~~~~~~lV~E~  424 (670)
                      |.. .++||+|+||.||+|....                ....+.+|+.+|++++||||+++++++.  .....++||||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~  101 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY  101 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence            444 4589999999999998542                1357889999999999999999999994  46789999999


Q ss_pred             cCCCCchhhcccC-------CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe----cCCCcEEEEeec
Q 035655          425 IPNGSLDSLLFDN-------ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI----DADMNARLGDFG  493 (670)
Q Consensus       425 ~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl----d~~~~~kL~DFG  493 (670)
                      ++ |+|.+++...       ....+++..++.++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||
T Consensus       102 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  177 (405)
T 3rgf_A          102 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMG  177 (405)
T ss_dssp             CS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred             CC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence            96 5888877532       12349999999999999999999999   899999999999999    778899999999


Q ss_pred             CceeccCCCc--ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch----------hHHHH
Q 035655          494 LARLFDHGKI--SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI----------LVDWV  560 (670)
Q Consensus       494 la~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~----------~~~~~  560 (670)
                      +++.......  .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......          .....
T Consensus       178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i  257 (405)
T 3rgf_A          178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI  257 (405)
T ss_dssp             CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred             CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence            9987654321  223446899999999998874 5899999999999999999999999753221          11111


Q ss_pred             HHHhhc---CCccccc------------C-CCCCC-cc-------cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          561 LEFQHL---GQVLDVV------------D-PNLGS-SY-------VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       561 ~~~~~~---~~~~~~~------------d-~~l~~-~~-------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......   .......            . ..... ..       .......+.+|+..||+.||.+|||++|+++|-+-
T Consensus       258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f  337 (405)
T 3rgf_A          258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  337 (405)
T ss_dssp             HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence            000000   0000000            0 00000 00       00002457789999999999999999999998764

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.4e-35  Score=307.79  Aligned_cols=237  Identities=24%  Similarity=0.344  Sum_probs=190.8

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ..++|+..+.||+|+||.||++....                  ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            35679999999999999999997642                  246788999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC---CcEEEEeecCceec
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD---MNARLGDFGLARLF  498 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~---~~~kL~DFGla~~~  498 (670)
                      +||+++++|.+++...  ..+++.+++.++.||+.||.|||+   .+++||||||+||+++.+   +.+||+|||++...
T Consensus       100 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~  174 (287)
T 2wei_A          100 GELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF  174 (287)
T ss_dssp             ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred             EEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence            9999999999988654  358999999999999999999999   899999999999999764   46999999999865


Q ss_pred             cCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          499 DHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       499 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ....  ......||+.|+|||.+.+ .++.++||||||++++||++|+.||......  +...... .+...      ..
T Consensus       175 ~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~-~~~~~------~~  242 (287)
T 2wei_A          175 QQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVE-TGKYA------FD  242 (287)
T ss_dssp             CCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH-HCCCC------CC
T ss_pred             cCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHH-cCCCC------CC
Confidence            4432  2233468999999998865 5899999999999999999999999764322  1111111 11110      00


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..........+.+++..||+.||.+||++.|++++
T Consensus       243 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            01111223567889999999999999999999985

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.4e-35  Score=311.41  Aligned_cols=247  Identities=23%  Similarity=0.334  Sum_probs=181.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeee-----------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCK-----------  413 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~-----------  413 (670)
                      .++|+..+.||+|+||.||+|....                ..+.+.+|++++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            4678999999999999999997653                2467889999999999999999999873           


Q ss_pred             ---ccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec-CCCcEEE
Q 035655          414 ---RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID-ADMNARL  489 (670)
Q Consensus       414 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld-~~~~~kL  489 (670)
                         +....++||||++ |+|.+++..   ..+++..++.++.|++.||+|||+   .+|+||||||+|||++ +++.+||
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl  162 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKI  162 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEE
Confidence               4467899999997 699999854   358999999999999999999999   8999999999999997 5679999


Q ss_pred             EeecCceeccCCCc--ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHHhh
Q 035655          490 GDFGLARLFDHGKI--SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEFQH  565 (670)
Q Consensus       490 ~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~~~  565 (670)
                      +|||+++.......  .......+|..|+|||.+.+ ..++.++|||||||+++||++|+.||....... .........
T Consensus       163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  242 (320)
T 2i6l_A          163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP  242 (320)
T ss_dssp             CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSC
T ss_pred             ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence            99999987643221  12234567999999998765 678999999999999999999999998643211 111100000


Q ss_pred             ----------cCCcc----c-ccCCCCC-CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          566 ----------LGQVL----D-VVDPNLG-SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       566 ----------~~~~~----~-~~d~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                                .....    . ...+... ..........+.+++..||+.||.+||+++|++++-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp  307 (320)
T 2i6l_A          243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHP  307 (320)
T ss_dssp             CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSH
T ss_pred             CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCc
Confidence                      00000    0 0000000 001112246688999999999999999999999853

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.5e-35  Score=316.96  Aligned_cols=242  Identities=21%  Similarity=0.320  Sum_probs=185.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe-----
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD-----  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~-----  417 (670)
                      .++|...+.||+|+||.||+|....                  ..+.+.+|+.++++++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            4678999999999999999997642                  13567899999999999999999999987654     


Q ss_pred             -eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          418 -LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       418 -~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                       .++||||++ ++|.+++.    ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       103 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  174 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR  174 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred             eEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeeccccc
Confidence             499999997 69988873    248999999999999999999999   899999999999999999999999999997


Q ss_pred             eccCCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc--------
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL--------  566 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~--------  566 (670)
                      .....    .....||+.|+|||++.+ ..++.++|||||||+++||++|+.||...... ...........        
T Consensus       175 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  250 (353)
T 3coi_A          175 HADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK  250 (353)
T ss_dssp             C------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred             CCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            65432    234578999999999876 67899999999999999999999999864321 11111000000        


Q ss_pred             ----------CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          567 ----------GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       567 ----------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                                ..+.....+.+ ..........+.+++..||+.||.+||+++|+++|-.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  308 (353)
T 3coi_A          251 LNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF  308 (353)
T ss_dssp             CSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             HhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence                      00000001111 1111233466888999999999999999999998754

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.7e-35  Score=326.02  Aligned_cols=240  Identities=22%  Similarity=0.256  Sum_probs=177.7

Q ss_pred             CccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCCCC
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGS  429 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~gs  429 (670)
                      .|...+.||+|+||+||.+....            ..+.+.+|+++|+++ +||||+++++++.+.+..++||||+. |+
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs   94 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN   94 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence            45557889999999997543211            335678999999987 89999999999999999999999995 69


Q ss_pred             chhhcccCCccc-----cCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-------------CcEEEEe
Q 035655          430 LDSLLFDNENFV-----LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-------------MNARLGD  491 (670)
Q Consensus       430 L~~~l~~~~~~~-----l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-------------~~~kL~D  491 (670)
                      |.+++.......     .++..++.++.||+.||+|||+   .+|+||||||+|||++.+             +.+||+|
T Consensus        95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D  171 (434)
T 2rio_A           95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD  171 (434)
T ss_dssp             HHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred             HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence            999997643211     2344567899999999999998   899999999999999754             4899999


Q ss_pred             ecCceeccCCCcc---eeeccccCcCCCCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHH
Q 035655          492 FGLARLFDHGKIS---HTTNVVGTIGYIAPELART-------GKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWV  560 (670)
Q Consensus       492 FGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~  560 (670)
                      ||+++........   ......||+.|+|||++.+       ..++.++|||||||+++||++ |+.||...........
T Consensus       172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~  251 (434)
T 2rio_A          172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII  251 (434)
T ss_dssp             CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHH
T ss_pred             cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHh
Confidence            9999977654322   2234589999999999865       578999999999999999999 9999975432221111


Q ss_pred             HHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       561 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      .   ....     .+.............+.+++.+||+.||.+||++.|+++|-
T Consensus       252 ~---~~~~-----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp  297 (434)
T 2rio_A          252 R---GIFS-----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP  297 (434)
T ss_dssp             H---TCCC-----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             c---CCCC-----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence            1   0000     01111122345567889999999999999999999999854

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=3.1e-35  Score=308.89  Aligned_cols=238  Identities=21%  Similarity=0.270  Sum_probs=168.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      .++|+..+.||+|+||.||+|....                  ..+.+.++..+++.++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            4678889999999999999998642                  1123445556788889999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccc-eEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ-VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      ||+ ++.+..+. ......+++..+..++.|++.||.|||+   . +++||||||+||+++.++.+||+|||++......
T Consensus       104 e~~-~~~~~~l~-~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          104 ELM-GTCAEKLK-KRMQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD  178 (318)
T ss_dssp             CCC-SEEHHHHH-HHHTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             ecc-CCcHHHHH-HHhccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence            999 44444444 3334569999999999999999999998   5 8999999999999999999999999999765443


Q ss_pred             CcceeeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          502 KISHTTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      .  ......||+.|+|||++.     ...++.++|||||||+++||++|+.||.........+ ...... .     .+.
T Consensus       179 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~-~-----~~~  249 (318)
T 2dyl_A          179 K--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL-TKVLQE-E-----PPL  249 (318)
T ss_dssp             ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH-HHHHHS-C-----CCC
T ss_pred             c--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH-HHHhcc-C-----CCC
Confidence            2  223457999999999984     4568899999999999999999999997633221111 111111 1     111


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      +..  .......+.+++..||+.||.+||+++|++++-
T Consensus       250 ~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~  285 (318)
T 2dyl_A          250 LPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHS  285 (318)
T ss_dssp             CCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred             CCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence            110  001224577899999999999999999999853

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.2e-36  Score=313.07  Aligned_cols=231  Identities=24%  Similarity=0.360  Sum_probs=182.4

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccch----------------------HHHHHHHHHHHhcc----ccCceeeeeeee
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPTR----------------------MREFAAEIESLGRL----RHKHLVNLQGWC  412 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~~----------------------~~~f~~Ei~~L~~l----~H~nIv~l~g~~  412 (670)
                      ...++|+..+.||+|+||.||+|.....                      ...+.+|+.++.++    +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            3457899999999999999999976331                      12344799999999    899999999999


Q ss_pred             eccCeeEEEEec-cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec-CCCcEEEE
Q 035655          413 KRKRDLLLVYDY-IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID-ADMNARLG  490 (670)
Q Consensus       413 ~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld-~~~~~kL~  490 (670)
                      ...+..++|+|+ +++++|.+++...  ..+++..++.++.||+.||.|||+   .+|+||||||+||+++ .++.+||+
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~  182 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLI  182 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEEEC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEEEE
Confidence            999999999999 7899999999764  358999999999999999999999   8999999999999999 88999999


Q ss_pred             eecCceeccCCCcceeeccccCcCCCCccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCc
Q 035655          491 DFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS-CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV  569 (670)
Q Consensus       491 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t-~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~  569 (670)
                      |||+++......   .....||..|+|||++.+..+. .++|||||||+++||++|+.||......        .. .. 
T Consensus       183 dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~-~~-  249 (312)
T 2iwi_A          183 DFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI--------LE-AE-  249 (312)
T ss_dssp             CCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--------HH-TC-
T ss_pred             EcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH--------hh-hc-
Confidence            999998765532   3345799999999998877664 5899999999999999999999752110        00 00 


Q ss_pred             ccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          570 LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       570 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                           ..+    +......+.+++..||+.||.+||+++|++++-.-
T Consensus       250 -----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~  287 (312)
T 2iwi_A          250 -----LHF----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM  287 (312)
T ss_dssp             -----CCC----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTT
T ss_pred             -----cCC----cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence                 011    11223467789999999999999999999997553

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=3.9e-36  Score=317.37  Aligned_cols=229  Identities=24%  Similarity=0.371  Sum_probs=188.9

Q ss_pred             hhcCccccceEeeeCceeEEEeeccch----------------------HHHHHHHHHHHhccc--cCceeeeeeeeecc
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPTR----------------------MREFAAEIESLGRLR--HKHLVNLQGWCKRK  415 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~~----------------------~~~f~~Ei~~L~~l~--H~nIv~l~g~~~~~  415 (670)
                      ..++|+..+.||+|+||.||+|+....                      .+.+.+|+.++++++  ||||+++++++...
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            456799999999999999999975331                      134668999999996  59999999999999


Q ss_pred             CeeEEEEeccCC-CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec-CCCcEEEEeec
Q 035655          416 RDLLLVYDYIPN-GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID-ADMNARLGDFG  493 (670)
Q Consensus       416 ~~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld-~~~~~kL~DFG  493 (670)
                      +..++|+|++.+ ++|.+++...  ..+++..++.++.||+.||.|||+   .+|+||||||+|||++ .++.+||+|||
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg  195 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG  195 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred             CcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence            999999999986 8999999654  468999999999999999999998   8999999999999999 78999999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccc
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDV  572 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~  572 (670)
                      +++......   .....||+.|+|||++.+..+ +.++|||||||+++||++|+.||......        . ....   
T Consensus       196 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------~-~~~~---  260 (320)
T 3a99_A          196 SGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI--------I-RGQV---  260 (320)
T ss_dssp             TCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--------H-HCCC---
T ss_pred             ccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh--------h-cccc---
Confidence            998765432   334579999999999887765 68899999999999999999999752210        0 0110   


Q ss_pred             cCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       573 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                         .....+    ...+.+++.+||+.||.+||+++|++++-.
T Consensus       261 ---~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~hp~  296 (320)
T 3a99_A          261 ---FFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQNHPW  296 (320)
T ss_dssp             ---CCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             ---cccccC----CHHHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence               011112    246788999999999999999999998644

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A*

Probab=100.00  E-value=1.8e-34  Score=292.93  Aligned_cols=195  Identities=17%  Similarity=0.164  Sum_probs=148.2

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCC-CCCCCcEEEEEcCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNS-GQGGFGLAFTVSPQ  120 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~-~~~g~GlaF~l~~~  120 (670)
                      +.++|+|.+. +|.|+||++..++.|||+|++|+++             +||+|+|+|+|.+++. ..+||||||+|+|.
T Consensus        27 ~~l~G~a~i~-~g~l~LT~~~~~~~G~~w~~~pi~~-------------~sF~t~F~F~I~~~~~~~~~gdGlAF~l~~~   92 (253)
T 2dur_A           27 WDFQGSTILT-SQYVRLTPDERSKEGSIWNHQPCFL-------------KDWEMHVHFKVHGTGKKNLHGDGIALWYTRD   92 (253)
T ss_dssp             EEEEETCEEC-SSCEEEECSSSSEEEEEEESSCBCC-------------SSEEEEEEEEEECCCCTTCCCCEEEEEEESC
T ss_pred             EEEccceEEE-CCEEEECCCCCCCEEEEEeCCCCcc-------------CcEEEEEEEEEecCCCCCcCCCcEEEEEECC
Confidence            9999999995 9999999999999999999999965             6899999999998765 57899999999997


Q ss_pred             CCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcccccccccccccCC-----Ccccc
Q 035655          121 PSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENG-----TKEDF  195 (670)
Q Consensus       121 ~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~~~~~~~~~~-----~~~~~  195 (670)
                      ..    ..|++||+.+       .++.|||||||++| .+  +|+  |+++||+++.+..+++.....++     .....
T Consensus        93 ~~----~~G~~lG~~~-------~~~gvAVefDT~~n-~~--~~~--~~~~~I~~~~n~gs~~~d~~~dg~~~~~~~c~~  156 (253)
T 2dur_A           93 RL----VPGPVFGSKD-------NFHGLAIFLDTYPN-DE--TTE--RVFPYISVMVNNGSLSYDHSKDGRWTELAGCTA  156 (253)
T ss_dssp             CS----CEETBTEECS-------SCEEEEEEEECSCC-CT--TCC--SCSSEEEEEEEESCCCCCGGGTTGGGCCEEEEC
T ss_pred             CC----CCCcccCcCC-------CCCEEEEEEECCCC-CC--CCC--CCCcEEEEEecCCceeeeccCCCcccccccccH
Confidence            54    3579999733       35789999999998 44  333  56666666655544321100011     00112


Q ss_pred             cc-CCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEeecCCceeeeEEEec
Q 035655          196 TL-ESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILG  274 (670)
Q Consensus       196 ~l-~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsastg~~~~~h~i~s  274 (670)
                      .+ ..|..++|||+||+.  +|+|++.+.+.         .|.+++++  ++ ...||++|||||||+||...+.|+|++
T Consensus       157 ~~~n~g~~~~v~I~Y~~~--~L~V~l~~~~~---------~~~~~~~~--~~-~v~Lp~~~yvGfSAaTG~~~~~h~Ils  222 (253)
T 2dur_A          157 DFRNRDHDTFLAVRYSRG--RLTVMTDLEDK---------NEWKNCID--IT-GVRLPTGYYFGASAGTGDLSDNHDIIS  222 (253)
T ss_dssp             CCBTCSSCEEEEEEEETT--EEEEEEECSSS---------SCCEEEEE--EC-CEECCSSBEEEEEEEESSSCCEEEEEE
T ss_pred             hhccCCCCeEEEEEEECC--EEEEEEeCCCC---------CCceEEEE--eC-CcccCCCcEEEEEeccCCCcceEEEEE
Confidence            34 348899999999975  89999987543         24444443  34 346999999999999999999999999


Q ss_pred             cccccC
Q 035655          275 WSFSMN  280 (670)
Q Consensus       275 W~fs~~  280 (670)
                      |+|.+-
T Consensus       223 wsf~sl  228 (253)
T 2dur_A          223 MKLFQL  228 (253)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            999864

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.4e-35  Score=323.27  Aligned_cols=240  Identities=21%  Similarity=0.342  Sum_probs=179.1

Q ss_pred             hhcCccccceEeeeCceeE-EEeeccc-----------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccC
Q 035655          360 ATKGFKQSEVIGTGGFGEV-YKGVLPT-----------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~V-ykg~~~~-----------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      ...+|...+.||+|+||+| |++....           ....+.+|+++|+++ +||||+++++++.+....++||||++
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  101 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA  101 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence            3456888999999999995 4443322           223467899999999 79999999999999999999999996


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-----CCcEEEEeecCceeccCC
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-----DMNARLGDFGLARLFDHG  501 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-----~~~~kL~DFGla~~~~~~  501 (670)
                       |+|.+++..... .+.+..++.++.||+.||.|||+   .+|+||||||+|||++.     ...+||+|||+++.....
T Consensus       102 -g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~  176 (432)
T 3p23_A          102 -ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG  176 (432)
T ss_dssp             -EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred             -CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence             699999976543 45556678999999999999999   89999999999999943     346889999999876543


Q ss_pred             Cc--ceeeccccCcCCCCccccc---cCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          502 KI--SHTTNVVGTIGYIAPELAR---TGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       502 ~~--~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      ..  .......||+.|+|||++.   ...++.++|||||||+++||++ |+.||..........   .. ......... 
T Consensus       177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~---~~-~~~~~~~~~-  251 (432)
T 3p23_A          177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI---LL-GACSLDCLH-  251 (432)
T ss_dssp             ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH---HT-TCCCCTTSC-
T ss_pred             CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH---Hh-ccCCccccC-
Confidence            21  2234567999999999987   4567889999999999999999 999996533221111   11 110011111 


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                           ........+.+++..||+.||.+||+++|+++|-
T Consensus       252 -----~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp  285 (432)
T 3p23_A          252 -----PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP  285 (432)
T ss_dssp             -----TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred             -----ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence                 1123345577899999999999999999999753

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A

Probab=100.00  E-value=4.3e-34  Score=290.86  Aligned_cols=206  Identities=14%  Similarity=0.133  Sum_probs=155.9

Q ss_pred             ceeEEeCCCCCC---CCCccceEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEE
Q 035655           24 KEEFIFNGFNET---KTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQ  100 (670)
Q Consensus        24 ~~~f~~~~f~~~---~~~~~~~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~  100 (670)
                      ..||.-+.....   -.+   +.++|+|.+. +|.|+||++..++.||++|++|++             ++||+|+|+|+
T Consensus        33 ~~Sf~~P~~~~~~~~i~~---w~~~G~a~i~-~~~IrLT~~~~~~~G~~w~~~p~~-------------~~sF~t~F~F~   95 (260)
T 1gv9_A           33 KYSFKGPHLVQSDGTVPF---WAHAGNAIPS-ADQIRIAPSLKSQRGSVWTKTKAA-------------FENWEVEVTFR   95 (260)
T ss_dssp             GGCEECSSCSCTTSCBTT---EEEEETCEEC-SSCEEEECSSTTCEEEEEESSCBC-------------CSSEEEEEEEE
T ss_pred             ceeEcCccccCCCCccCC---eEEcccEEee-CCEEEeCCCCCCCEEEEEECCCcc-------------ccCEEEEEEEE
Confidence            356655544321   134   9999999995 899999999889999999999994             47999999999


Q ss_pred             EecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCC-CCC------CCCeeEEec
Q 035655          101 IVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNET-SDS------QGNHVGINV  173 (670)
Q Consensus       101 i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~-~Dp------~~~Hvgidv  173 (670)
                      |..++ ..+||||||+|+|...    ..|++||+.       ..++.||||||||+| .+. .+|      |++|+|||+
T Consensus        96 I~~~~-~~~gdGlAF~l~~~~~----~~g~~~G~~-------~~~~gvaVefDT~~N-~~~~~~p~I~~~indg~~~~d~  162 (260)
T 1gv9_A           96 VTGRG-RIGADGLAIWYTENQG----LDGPVFGSA-------DMWNGVGIFFDSFDN-DGKKNNPAIVVVGNNGQINYDH  162 (260)
T ss_dssp             EECSS-SCCCCEEEEEEESSCC----CEEEETTEC-------SCCEEEEEEEECCCC------CCEEEEEEEESCCCCCH
T ss_pred             EecCC-CCCCCeEEEEEecCCC----CCCCccCCC-------CCCCEEEEEEECCCC-CCCCCCCceEEEeCCCceEeec
Confidence            99764 3689999999998754    357889983       245789999999998 432 123      467888888


Q ss_pred             CC-cccccccccccccCCCccccccC-CCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccc
Q 035655          174 NS-MKSIKLEPAAYYENGTKEDFTLE-SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAF  251 (670)
Q Consensus       174 ns-~~s~~~~~~~~~~~~~~~~~~l~-~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l  251 (670)
                      |+ +.|.....         ....+. +|..++|||+||+.  +|+|++.+...        +......++..+| +.+|
T Consensus       163 ~~d~~s~~~~~---------c~~~~~n~g~~~~~~I~Y~~~--~L~V~l~~~~~--------~~~~~~~~~~~vd-~~~L  222 (260)
T 1gv9_A          163 QNDGATQALAS---------CQRDFRNKPYPVRAKITYYQK--TLTVMINNGFT--------PDKNDYEFCAKVE-NMVI  222 (260)
T ss_dssp             HHHHHHHCSEE---------ECCCCBSCSSCEEEEEEEETT--EEEEEEECSSC--------CCTTCCEEEEEET-TCCC
T ss_pred             CCCcccceeec---------cChhhccCCCcEEEEEEEECC--EEEEEEeeccC--------CCCCcceEEEEEc-cccc
Confidence            75 55543332         112333 58999999999986  89999975321        1111235777888 6789


Q ss_pred             cccceeeEeecCCceeeeEEEecccccc
Q 035655          252 QETMYVGFSASTGRKVSSHFILGWSFSM  279 (670)
Q Consensus       252 ~~~~~vGFsastg~~~~~h~i~sW~fs~  279 (670)
                      |+++||||||+||...+.|+|++|+|..
T Consensus       223 P~~~~vGfSAaTG~~~e~hdIlsw~~~~  250 (260)
T 1gv9_A          223 PTQGHFGISAATGGLADDHDVLSFLTFQ  250 (260)
T ss_dssp             CSSBEEEEEEECCSSCCEEEEEEEEEEE
T ss_pred             CCCcEEEEEEeCCCCcceEEEEEEEEEE
Confidence            9999999999999999999999999975

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=4.9e-34  Score=298.10  Aligned_cols=223  Identities=22%  Similarity=0.281  Sum_probs=173.5

Q ss_pred             hcCcccc-ceEeeeCceeEEEeeccc-----------hHHHHHHHHHHH-hccccCceeeeeeeeec----cCeeEEEEe
Q 035655          361 TKGFKQS-EVIGTGGFGEVYKGVLPT-----------RMREFAAEIESL-GRLRHKHLVNLQGWCKR----KRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~-~~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~L-~~l~H~nIv~l~g~~~~----~~~~~lV~E  423 (670)
                      .++|... +.||+|+||.||++....           ....+.+|+.++ +.++||||+++++++..    ....++|||
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e   95 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   95 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence            3567776 779999999999998743           246788999998 55689999999999876    677999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC---CCcEEEEeecCceeccC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDH  500 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~---~~~~kL~DFGla~~~~~  500 (670)
                      |+++|+|.+++.......+++.+++.++.|++.||.|||+   .+|+||||||+|||++.   ++.+||+|||++.... 
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-  171 (299)
T 3m2w_A           96 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-  171 (299)
T ss_dssp             CCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-
Confidence            9999999999987766679999999999999999999999   89999999999999998   7899999999986433 


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                                            +..++.++|||||||+++||++|+.||.........     .................
T Consensus       172 ----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~  224 (299)
T 3m2w_A          172 ----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----PGMKTRIRMGQYEFPNP  224 (299)
T ss_dssp             ----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------CCSCCSSCTTCCSSCHH
T ss_pred             ----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----HHHHHHHhhccccCCch
Confidence                                  234678999999999999999999999753211000     00000000000011100


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                      ........+.+++..||+.||.+||+++|+++|-
T Consensus       225 ~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp  258 (299)
T 3m2w_A          225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP  258 (299)
T ss_dssp             HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             hcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence            0112346788999999999999999999999964

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=5.5e-35  Score=333.59  Aligned_cols=243  Identities=26%  Similarity=0.354  Sum_probs=186.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeec------cCee
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKR------KRDL  418 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~------~~~~  418 (670)
                      ++|+..++||+|+||.||+|....                 ..+.+.+|++++++++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            679999999999999999987633                 24568899999999999999999999865      6778


Q ss_pred             EEEEeccCCCCchhhcccCC-ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc---EEEEeecC
Q 035655          419 LLVYDYIPNGSLDSLLFDNE-NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN---ARLGDFGL  494 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~---~kL~DFGl  494 (670)
                      ++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.   +||+|||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence            99999999999999997643 2368999999999999999999999   89999999999999997765   99999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCC----cc
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ----VL  570 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~----~~  570 (670)
                      +.......  ......||+.|+|||++.+..++.++|||||||+++||++|+.||..... ...|.........    ..
T Consensus       171 a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~~~~~~~i~~~~~~~~~~~  247 (676)
T 3qa8_A          171 AKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-PVQWHGKVREKSNEHIVVY  247 (676)
T ss_dssp             CCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-HHHSSTTCC------CCSC
T ss_pred             cccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-hhhhhhhhhcccchhhhhh
Confidence            98765443  23446799999999999999999999999999999999999999975321 1111110000000    00


Q ss_pred             ccc--------CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHH
Q 035655          571 DVV--------DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQV  610 (670)
Q Consensus       571 ~~~--------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev  610 (670)
                      +..        ...............+.+++..||+.||.+||+++|+
T Consensus       248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            000        0011122344466788999999999999999999664

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.1e-34  Score=331.68  Aligned_cols=222  Identities=20%  Similarity=0.276  Sum_probs=179.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCe-----
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRD-----  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~-----  417 (670)
                      .++|++.+.||+|+||.||++.+..                  ....+.+|++++++++||||++++++|...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            3689999999999999999997642                  12467899999999999999999999987665     


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .|+||||+++++|.+++..    .++|.+++.++.||+.||.|||+   ++|+||||||+|||++.+ .+||+|||+++.
T Consensus       159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchh
Confidence            7999999999999998743    69999999999999999999999   899999999999999986 999999999987


Q ss_pred             ccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          498 FDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ....     ....||+.|+|||++.++. +.++|||||||+++||++|..|+.....                ..+.   
T Consensus       231 ~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------~~~~---  285 (681)
T 2pzi_A          231 INSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------------DGLP---  285 (681)
T ss_dssp             TTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC----------------SSCC---
T ss_pred             cccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc----------------cccc---
Confidence            6543     3457999999999987654 8999999999999999999988764110                0000   


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCC-HHHHHHHhc
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPT-MRQVLRYLN  615 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~  615 (670)
                      ...........+.+++..||+.||.+||+ ++++.+.|.
T Consensus       286 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          286 EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            01112223456889999999999999996 555554443

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=4.2e-33  Score=289.73  Aligned_cols=212  Identities=13%  Similarity=0.062  Sum_probs=169.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||.||+|....                   ..+.|.+|+..+++++||||+++++++.+.+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            579999999999999999998643                   1267899999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++++|.+++...    ....++.+++.|++.||.|||+   .+|+||||||+|||++.++.+||+++          
T Consensus       111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~----------  173 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYP----------  173 (286)
T ss_dssp             ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSC----------
T ss_pred             EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEec----------
Confidence            999999999999432    3555788999999999999999   89999999999999999999999743          


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC--Cc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG--SS  580 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~--~~  580 (670)
                                 +|++|       ++.++|||||||++|||++|+.||........        .............  ..
T Consensus       174 -----------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~--------~~~~~~~~~~~~~~~~~  227 (286)
T 3uqc_A          174 -----------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSG--------LAPAERDTAGQPIEPAD  227 (286)
T ss_dssp             -----------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC--------SEECCBCTTSCBCCHHH
T ss_pred             -----------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchh--------hHHHHHHhccCCCChhh
Confidence                       34443       68999999999999999999999986332100        0000000000000  01


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ........+.+++.+||+.||.+| |+.|+++.|+..
T Consensus       228 ~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~  263 (286)
T 3uqc_A          228 IDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA  263 (286)
T ss_dssp             HCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred             cccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence            112234568899999999999999 999999999764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.8e-33  Score=307.88  Aligned_cols=229  Identities=14%  Similarity=0.129  Sum_probs=172.7

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcccc-Cceeeee---------
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRH-KHLVNLQ---------  409 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H-~nIv~l~---------  409 (670)
                      ..+++|...++||+|+||.||+|.+..                   ..+.|.+|+.+++.++| +|.....         
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~  154 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  154 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCC
T ss_pred             CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccch
Confidence            345568888999999999999998642                   24678899999999987 3221111         


Q ss_pred             ------------eeeec-----cCeeEEEEeccCCCCchhhcc-----cCCccccCHHHHHHHHHHHHHHhhhccccccc
Q 035655          410 ------------GWCKR-----KRDLLLVYDYIPNGSLDSLLF-----DNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ  467 (670)
Q Consensus       410 ------------g~~~~-----~~~~~lV~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~  467 (670)
                                  .++..     ....+++|+++ +++|.+++.     ......+++..++.++.||++||+|||+   +
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~  230 (413)
T 3dzo_A          155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---Y  230 (413)
T ss_dssp             EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred             hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---C
Confidence                        11111     12457777765 689999984     2334568999999999999999999998   8


Q ss_pred             eEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCcccc----------ccCCCCccchhHHHHH
Q 035655          468 VVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA----------RTGKASCSTDVFAYGV  537 (670)
Q Consensus       468 ~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~t~ksDV~S~Gv  537 (670)
                      +|+||||||+|||++.++.+||+|||+++.....    .....| +.|+|||++          .+..++.++|||||||
T Consensus       231 ~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv  305 (413)
T 3dzo_A          231 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL  305 (413)
T ss_dssp             TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred             CcccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence            9999999999999999999999999999865432    344577 999999998          5556889999999999


Q ss_pred             HHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          538 LLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       538 vl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ++|||++|+.||......           ..........  ..+    .+.+.+++..||+.||.+||++.|++++
T Consensus       306 il~elltg~~Pf~~~~~~-----------~~~~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          306 AIYWIWCADLPNTDDAAL-----------GGSEWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             HHHHHHHSSCCCCTTGGG-----------SCSGGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHCCCCCCCcchh-----------hhHHHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            999999999999763211           0011111100  112    2567889999999999999998888763

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.98  E-value=2e-33  Score=298.51  Aligned_cols=228  Identities=18%  Similarity=0.215  Sum_probs=175.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccc---------cCceeeee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLR---------HKHLVNLQ  409 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~---------H~nIv~l~  409 (670)
                      .++|+..++||+|+||.||+|+...                      ..+.+.+|+.++++++         ||||+++.
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            4678899999999999999997633                      1277899999999986         55555555


Q ss_pred             ee-----------------eec-------------cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhh
Q 035655          410 GW-----------------CKR-------------KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL  459 (670)
Q Consensus       410 g~-----------------~~~-------------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~  459 (670)
                      +.                 +.+             .+..++||||+++|++.+.+.+   ..+++.+++.++.||+.||.
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHH
Confidence            54                 433             6789999999999987777643   35899999999999999999


Q ss_pred             hcc-ccccceEEecccCCCcEEecCCC--------------------cEEEEeecCceeccCCCcceeeccccCcCCCCc
Q 035655          460 YLH-EEWEQVVIHRDVKSGNVLIDADM--------------------NARLGDFGLARLFDHGKISHTTNVVGTIGYIAP  518 (670)
Q Consensus       460 yLH-~~~~~~ivHrDIkp~NILld~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aP  518 (670)
                      ||| +   .+|+||||||+|||++.++                    .+||+|||+++.....      ...||+.|+||
T Consensus       176 ~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aP  246 (336)
T 2vuw_A          176 VAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDE  246 (336)
T ss_dssp             HHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCS
T ss_pred             HHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccCh
Confidence            999 7   8999999999999999887                    8999999999876542      34799999999


Q ss_pred             cccccCCCCccchhHHHHHH-HHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc--ccCCCCCCcccHHHHHHHHHHHHh
Q 035655          519 ELARTGKASCSTDVFAYGVL-LLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD--VVDPNLGSSYVVAEMELVLQLGLL  595 (670)
Q Consensus       519 E~~~~~~~t~ksDV~S~Gvv-l~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~l~~l~~~  595 (670)
                      |++.+.. +.++||||++++ .+++++|..||..     ..|......  .+..  .................+.+++..
T Consensus       247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~dli~~  318 (336)
T 2vuw_A          247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----VLWLHYLTD--KMLKQMTFKTKCNTPAMKQIKRKIQEFHRT  318 (336)
T ss_dssp             GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----HHHHHHHHH--HHHHTCCCSSCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----hhhhhHHHH--hhhhhhccCcccchhhhhhcCHHHHHHHHH
Confidence            9998666 899999998777 6778889999742     112111100  0000  111112223445667889999999


Q ss_pred             hccCCCCCCCCHHHHH-HH
Q 035655          596 CSHQKAEARPTMRQVL-RY  613 (670)
Q Consensus       596 Cl~~dP~~RPs~~evl-~~  613 (670)
                      ||+.|     |++|++ +|
T Consensus       319 ~L~~d-----sa~e~l~~H  332 (336)
T 2vuw_A          319 MLNFS-----SATDLLCQH  332 (336)
T ss_dssp             GGGSS-----SHHHHHHHC
T ss_pred             HhccC-----CHHHHHhcC
Confidence            99966     999998 65

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.98  E-value=2.7e-33  Score=278.54  Aligned_cols=116  Identities=28%  Similarity=0.457  Sum_probs=105.5

Q ss_pred             CCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeec
Q 035655          144 SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPM  223 (670)
Q Consensus       144 ~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~  223 (670)
                      .||+|||||||++| .++.||++|||||||||+.|+++++           +++.+|+.|+|||+||+.+++|+|+|++.
T Consensus         1 ~n~~vAVEFDT~~n-~~~~Dp~~nHVGIdvNs~~S~~~~~-----------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~   68 (237)
T 1nls_A            1 ADTIVAVELDTYPN-TDIGDPSYPHIGIDIKSVRSKKTAK-----------WNMQNGKVGTAHIIYNSVDKRLSAVVSYP   68 (237)
T ss_dssp             CCCEEEEEEECSCC-GGGTCCSSCEEEEEESSSSCSEEEE-----------CCCCTTCEEEEEEEEETTTTEEEEEEECT
T ss_pred             CCCEEEEEEeCCCC-cccCCCCCCeeeEecCCcccccccc-----------ccccCCCEEEEEEEEeCCCCEEEEEEecC
Confidence            37899999999999 7877999999999999999998876           45789999999999999999999999864


Q ss_pred             CCcccccccCCCCCCcccccccCCcccccccceeeEeecCCceeeeEEEeccccccCCC
Q 035655          224 NKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGA  282 (670)
Q Consensus       224 ~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsastg~~~~~h~i~sW~fs~~~~  282 (670)
                      +          . ..|+|++.+||+++|+|+||||||||||...|.|+|++|+|++...
T Consensus        69 ~----------~-~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~h~IlsWsF~s~~~  116 (237)
T 1nls_A           69 N----------A-DSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLK  116 (237)
T ss_dssp             T----------S-CCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEEE
T ss_pred             C----------C-CcceEEEeeChHHhCccccEEEEEeccCCcceeeeeEEEEEEeccc
Confidence            3          1 4689999999999999999999999999999999999999998753

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=99.95  E-value=2.2e-28  Score=214.83  Aligned_cols=105  Identities=23%  Similarity=0.423  Sum_probs=94.1

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCC------CeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH------NVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      +.++|+|++|.+...+   |.++|+|.+.+ |.|+||++..      +++|||+|++||+|||+ ++     +|+||+|+
T Consensus         2 ~~~~F~f~~F~~~~~n---l~l~G~A~v~~-g~l~LT~~~~~g~~~~~s~Gra~Y~~Pv~l~d~-tg-----~vaSFsT~   71 (113)
T 1qmo_A            2 QSLSFSFTKFDPNQED---LIFQGHATSTN-NVLQVTKLDSAGNPVSSSAGRVLYSAPLRLWED-SA-----VLTSFDTI   71 (113)
T ss_dssp             EEEEEEESSCCSSCTT---EEEEETCEEET-TEEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TE-----EEEEEEEE
T ss_pred             cceEEEcCCCCCCCCC---eEEecceEcCC-CceEeCCCCCCCcccCCcEEEEEeCCCEEeeCC-CC-----CEEeeEEE
Confidence            3579999999864356   99999999985 9999998764      79999999999999999 88     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCC
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNST  138 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~  138 (670)
                      |+|.|.+++...+||||||||+|....|. +.||||||+|.+
T Consensus        72 F~F~I~~~~~~~~gdGlAF~lap~~~~p~-s~g~~LGL~n~~  112 (113)
T 1qmo_A           72 INFEISTPYTSRIADGLAFFIAPPDSVIS-YHGGFLGLFPNA  112 (113)
T ss_dssp             EEEEEECSSSSCCCCEEEEEEECTTCCCC-CCGGGTTTCSSC
T ss_pred             EEEEEecCCCCCCCCeEEEEecCCCCCCC-CCccccccccCC
Confidence            99999988777899999999999887776 999999999864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=1e-28  Score=280.33  Aligned_cols=153  Identities=24%  Similarity=0.201  Sum_probs=116.4

Q ss_pred             hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcccc
Q 035655          386 RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE  464 (670)
Q Consensus       386 ~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~  464 (670)
                      ..++|.+|+++|+++ .|+||+++++++++++..||||||++|++|.++|.+..  +++..   +|+.||+.||+|||+ 
T Consensus       284 ~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~-  357 (569)
T 4azs_A          284 NKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEK-  357 (569)
T ss_dssp             HHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHH-
Confidence            346799999999999 69999999999999999999999999999999997653  45553   589999999999999 


Q ss_pred             ccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh
Q 035655          465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT  544 (670)
Q Consensus       465 ~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t  544 (670)
                        ++||||||||+||||++++++||+|||+|+...... ......+||++|||||++.+ .+..++|+|++|++++++.+
T Consensus       358 --~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~  433 (569)
T 4azs_A          358 --QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQ  433 (569)
T ss_dssp             --TTCEESCCCGGGEEECTTSCEEECCCTTEESCC----CCSHHHHHHHHHHHHHHC------------------CCCCT
T ss_pred             --CCceeccCchHhEEECCCCCEEEeecccCeeCCCCC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhcc
Confidence              999999999999999999999999999998765433 23445689999999999875 56778999999999877765


Q ss_pred             CCCC
Q 035655          545 GRRP  548 (670)
Q Consensus       545 G~~p  548 (670)
                      +..+
T Consensus       434 ~~~~  437 (569)
T 4azs_A          434 PWSN  437 (569)
T ss_dssp             THHH
T ss_pred             ccch
Confidence            5433

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13

Probab=99.91  E-value=3.4e-24  Score=216.91  Aligned_cols=183  Identities=17%  Similarity=0.244  Sum_probs=140.7

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      +.+.|+|.+. ++.|+||++ .++.|+++.+.|+.+            +++|+|+|+|+|..+. ..+||||||++++..
T Consensus        33 w~~~G~a~v~-~~~IrLTp~-~~s~G~iW~~~p~~~------------~~~f~~~f~FrI~g~~-~~~gdGlAfwlt~~~   97 (256)
T 2a6y_A           33 WQTGEQASLE-EGRIVLTSN-QNSKGSLWLKQGFDL------------KDSFTMEWTFRSVGYS-GQTDGGISFWFVQDS   97 (256)
T ss_dssp             EEEEETCEEE-TBEEECCCS-TTCEEEEEESSCEEE------------SSCEEEEEEEEEESCC-SCCSCEEEEEEEECS
T ss_pred             eEEccceEEe-CCEEEECCC-CCceEEEeeCCCCcc------------cCCEEEEEEEEEecCC-CCCCCeEEEEEeCCC
Confidence            9999999995 999999998 678999888888864            4789999999999764 348999999999875


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCC------CCeeEEecCCcccccccccccccCCCcccc
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQ------GNHVGINVNSMKSIKLEPAAYYENGTKEDF  195 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~------~~Hvgidvns~~s~~~~~~~~~~~~~~~~~  195 (670)
                      ..|  ..|+.+|..+.       ..-+||||||+.| .   .|.      +.|+++|.+++.+..... +        ..
T Consensus        98 ~~~--~~g~~~G~~~~-------f~GlaV~fDT~~n-~---~p~i~~~~Ndg~~~~d~~~~~~~~~~~-c--------~~  155 (256)
T 2a6y_A           98 NIP--RDKQLYNGPVN-------YDGLQLLVDNNGP-L---GPTLRGQLNDGQKPVDKTKIYDQSFAS-C--------LM  155 (256)
T ss_dssp             SSC--CCCTBTTBCTT-------CEEEEEEEESCST-T---CSEEEEEEEESSSCCCGGGHHHHCSEE-E--------EC
T ss_pred             Ccc--cCCcccCcCCC-------CCEEEEEEECCCC-C---CceEEEEECCCceecccCCCcccceec-c--------ee
Confidence            432  56788888642       2358999999977 2   343      678888888744443332 1        11


Q ss_pred             cc-CCCCcEEEEEEec-CcccEEEEEEeecCCcccccccCCCCCCcccccccCCccc-ccccc-eeeEeecCC---ceee
Q 035655          196 TL-ESGDPVQAWIDYD-GVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPA-FQETM-YVGFSASTG---RKVS  268 (670)
Q Consensus       196 ~l-~~g~~~~a~I~Yd-~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~-l~~~~-~vGFsastg---~~~~  268 (670)
                      .. .+|..++|||+|+ +..+.|+|.+..  .             .    -.++..+ ||+.+ ||||||+||   ...+
T Consensus       156 ~~rn~~~~~~v~I~Y~~~~~~~L~V~i~~--~-------------~----c~~~~~v~LP~~~~~~GfSAaTG~~~~~~d  216 (256)
T 2a6y_A          156 GYQDSSVPSTIRVTYDLEDDNLLKVQVDN--K-------------V----CFQTRKVRFPSGSYRIGVTAQNGAVNNNAE  216 (256)
T ss_dssp             CCTTCSSCEEEEEEEEGGGTSEEEEEETT--E-------------E----EEEESCEECCSEEEEEEEEEECCSGGGCCC
T ss_pred             ecccCCCcEEEEEEEecCCCcEEEEEEcC--E-------------E----EEEECcEEeCCCCeEEEEEEeCCCCCCCcc
Confidence            22 3789999999999 888899999842  1             1    1223344 78887 699999999   8899


Q ss_pred             eEEEeccccccC
Q 035655          269 SHFILGWSFSMN  280 (670)
Q Consensus       269 ~h~i~sW~fs~~  280 (670)
                      .|+|++|+|...
T Consensus       217 ~hdIls~~~~~~  228 (256)
T 2a6y_A          217 SFEIFKMQFFNG  228 (256)
T ss_dssp             EEEEEEEEEEES
T ss_pred             eEEEEEEEEEec
Confidence            999999999984

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.91  E-value=1.5e-25  Score=252.88  Aligned_cols=173  Identities=17%  Similarity=0.162  Sum_probs=137.2

Q ss_pred             CccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .+...++||+|+||.||+|....                      ..+.|.+|+++|++++||||+++..++...+..++
T Consensus       337 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          337 RKIPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             -----------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             cCCCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            33456789999999999885422                      13457899999999999999977777777788899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++++|.+++.+          +..++.|+++||.|||+   ++|+||||||+|||++.  ++||+|||+++....
T Consensus       417 VmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~  481 (540)
T 3en9_A          417 MMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL  481 (540)
T ss_dssp             EEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred             EEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence            9999999999999964          55899999999999998   89999999999999998  999999999998755


Q ss_pred             CCcce------eeccccCcCCCCcccccc--CCCCccchhHHHHHHHHHHHhCCCCCC
Q 035655          501 GKISH------TTNVVGTIGYIAPELART--GKASCSTDVFAYGVLLLEIATGRRPID  550 (670)
Q Consensus       501 ~~~~~------~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~el~tG~~pf~  550 (670)
                      .....      .....||+.|||||++..  ..|+.+.|+|+..+-.++-+.++.+|.
T Consensus       482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            32211      235689999999999976  567888999999999998888877763

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.91  E-value=1.3e-24  Score=216.01  Aligned_cols=107  Identities=24%  Similarity=0.508  Sum_probs=94.1

Q ss_pred             CCceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCC------CeEEEEEecCceeeecCCCCCCCCCCccceeE
Q 035655           22 QQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH------NVIGHAFYNKPIQMLDKSTSLSSKPNASSFST   95 (670)
Q Consensus        22 ~~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst   95 (670)
                      ++.++|+|++|.+...+   |.++|+|.+.++|.|+||++..      +++|||+|++||+|||. ++     +++||+|
T Consensus       123 s~~~~F~~~~F~~~~~n---l~l~G~A~v~~~g~l~LT~~~~n~~~~~~~~Gra~Y~~Pv~lwd~-~~-----~vaSFsT  193 (237)
T 1nls_A          123 TNALHFMFNQFSKDQKD---LILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SA-----VVASFEA  193 (237)
T ss_dssp             EEEEEEEESCCCTTCTT---EEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TE-----EEEEEEE
T ss_pred             cccchhhhccccccCCC---eEEccceEecCCCceEecCCccCCccccCceEEEEeCCCEEeecC-CC-----CEeeeEE
Confidence            35689999999864456   9999999997789999998763      78999999999999997 66     8999999


Q ss_pred             EEEEEEecCCCCCCCCcEEEEEcCCC-CCCCCCCCcccccccCC
Q 035655           96 CFVFQIVTPNSGQGGFGLAFTVSPQP-SFPGGKAEHYLGILNST  138 (670)
Q Consensus        96 ~F~f~i~~~~~~~~g~GlaF~l~~~~-~~~~~~~g~~lGl~~~~  138 (670)
                      +|+|.|.++ ...+||||||||+|.+ .+|.+++||||||||.+
T Consensus       194 ~F~F~I~~~-~~~~g~GlAF~lap~~~~~p~~~~g~~LGL~n~~  236 (237)
T 1nls_A          194 TFTFLIKSP-DSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDA  236 (237)
T ss_dssp             EEEEECCCS-SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSC
T ss_pred             EEEEEEecC-CCCCCccEEEEECCCCCCCCCCCCcCeeccccCC
Confidence            999999986 3468999999999987 48999999999999975

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.80  E-value=3.6e-20  Score=191.83  Aligned_cols=136  Identities=15%  Similarity=0.130  Sum_probs=109.8

Q ss_pred             hHHHhhcCccccceEeeeCceeEEEeeccc---------------------------------hHHHHHHHHHHHhcccc
Q 035655          356 DLYTATKGFKQSEVIGTGGFGEVYKGVLPT---------------------------------RMREFAAEIESLGRLRH  402 (670)
Q Consensus       356 ~l~~~t~~f~~~~~lG~G~fg~Vykg~~~~---------------------------------~~~~f~~Ei~~L~~l~H  402 (670)
                      .+......|...+.||+|+||.||+|....                                 ....+.+|+.+|++++ 
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-  162 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-  162 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence            344445567778999999999999998632                                 1235789999999999 


Q ss_pred             CceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec
Q 035655          403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID  482 (670)
Q Consensus       403 ~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld  482 (670)
                       | +++.+++.. +..++||||+++|+|.+ +..        .....++.|++.||.|||+   .+|+||||||+|||++
T Consensus       163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~  227 (282)
T 1zar_A          163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS  227 (282)
T ss_dssp             -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE
T ss_pred             -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE
Confidence             5 666665543 56799999999999998 521        2244799999999999998   9999999999999999


Q ss_pred             CCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccc
Q 035655          483 ADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR  522 (670)
Q Consensus       483 ~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~  522 (670)
                       ++.+||+|||+++.              +..|+|||++.
T Consensus       228 -~~~vkl~DFG~a~~--------------~~~~~a~e~l~  252 (282)
T 1zar_A          228 -EEGIWIIDFPQSVE--------------VGEEGWREILE  252 (282)
T ss_dssp             -TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred             -CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence             99999999999963              34578999874

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A

Probab=99.69  E-value=1.3e-16  Score=157.75  Aligned_cols=181  Identities=19%  Similarity=0.264  Sum_probs=123.6

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      +.+.|+|.+. ++.|+||++ .++.|.++.+.|+++.            .+|+++|+|+|..+. ..+||||||.+++.+
T Consensus        26 W~~~G~a~i~-~~~IrLTp~-~~~~G~iWs~~p~~~~------------~~weie~~Fri~g~~-~~~gdGlA~W~t~~~   90 (222)
T 2a6z_A           26 WQTGEQASLE-EGRIVLTSN-QNSKGSLWLKQGFDLK------------DSFTMEWTFRSVGYS-GQTDGGISFWFVQDS   90 (222)
T ss_dssp             EEEEETCEEE-TTEEESCCS-TTCEEEEEESSCEECC------------SCEEEEEEEEEESCC-SCCSCEEEEEEEECS
T ss_pred             cEEcccEEEc-CCEEEECCC-CCCeEEEEeCCCCCCC------------CCEEEEEEEEEeCCC-CCCCCEEEEEEECCC
Confidence            9999999997 899999999 5778999999999752            369999999998763 357999999999765


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCC-cccccc-----cccccccCCCcccc
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNS-MKSIKL-----EPAAYYENGTKEDF  195 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns-~~s~~~-----~~~~~~~~~~~~~~  195 (670)
                      ..+  ..|..+|.-+.       -.=+||+|||+.| .      .++|.+.+|. -.+-..     ..++.      -..
T Consensus        91 ~~~--~~g~~~G~~~~-------f~GL~I~~Dt~~n-~------~p~i~~~~ndG~~~yd~~~~~~~~~~~------C~~  148 (222)
T 2a6z_A           91 NIP--RDKQLYNGPVN-------YDGLQLLVDNNGP-L------GPTLRGQLNDGQKPVDKTKIYDQSFAS------CLM  148 (222)
T ss_dssp             SSC--CCCTBTTBCTT-------CEEEEEEEESCST-T------SSEEEEEEEESSSCCCGGGHHHHCSEE------EEC
T ss_pred             ccc--CCCcccCCCCC-------CCEEEEEEECCCC-C------CceEEEEECCCCeeeccCCCccccccc------cce
Confidence            311  23444444221       1125999999976 2      3456655542 111000     11110      011


Q ss_pred             cc-CCCCcEEEEEEec-CcccEEEEEEeecCCcccccccCCCCCCccc-ccccCCccccccc-ceeeEeecCC---ceee
Q 035655          196 TL-ESGDPVQAWIDYD-GVNRLVNVTICPMNKKNKLSFHFGKPSQPLL-SLPLDLSPAFQET-MYVGFSASTG---RKVS  268 (670)
Q Consensus       196 ~l-~~g~~~~a~I~Yd-~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~l-s~~~dl~~~l~~~-~~vGFsastg---~~~~  268 (670)
                      .. ..+.+.++||+|+ ...+.|+|.+..  .             ..+ ...|+    ||+. .|+||||+||   ...+
T Consensus       149 ~~rn~~~~~~~rI~Y~~~~~~~l~v~id~--~-------------~C~~~~~v~----LP~~~~y~G~SA~TG~l~~~~d  209 (222)
T 2a6z_A          149 GYQDSSVPSTIRVTYDLEDDNLLKVQVDN--K-------------VCFQTRKVR----FPSGSYRIGVTAQNGAVNNNAE  209 (222)
T ss_dssp             CCTTEEEEEEEEEEEEGGGTSEEEEEETT--E-------------EEEEESCCC----CCSSEEEEEEEEECCSGGGCCC
T ss_pred             eccCCCCcEEEEEEEEcCCCcEEEEEEcC--e-------------EEEEeCCee----cCCCCcEEEEEEcCCCCCCCCc
Confidence            22 3477899999998 667789998742  1             111 12233    4555 4799999999   8889


Q ss_pred             eEEEeccccc
Q 035655          269 SHFILGWSFS  278 (670)
Q Consensus       269 ~h~i~sW~fs  278 (670)
                      .|+|++|++.
T Consensus       210 ~hdil~~~~~  219 (222)
T 2a6z_A          210 SFEIFKMQFF  219 (222)
T ss_dssp             EEEEEEEEEE
T ss_pred             cEEEEEEEEE
Confidence            9999999875

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.64  E-value=1.8e-16  Score=161.76  Aligned_cols=122  Identities=18%  Similarity=0.142  Sum_probs=96.1

Q ss_pred             ccccceEeeeCceeEEEeec-cch-H----------------------------------------HHHHHHHHHHhccc
Q 035655          364 FKQSEVIGTGGFGEVYKGVL-PTR-M----------------------------------------REFAAEIESLGRLR  401 (670)
Q Consensus       364 f~~~~~lG~G~fg~Vykg~~-~~~-~----------------------------------------~~f~~Ei~~L~~l~  401 (670)
                      |+..+.||+|+||.||+|.. ..+ .                                        ..+.+|+..|++++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56788999999999999976 111 0                                        14678999999999


Q ss_pred             cCce--eeeeeeeeccCeeEEEEeccCC-C----CchhhcccCCccccCHHHHHHHHHHHHHHhhhcc-ccccceEEecc
Q 035655          402 HKHL--VNLQGWCKRKRDLLLVYDYIPN-G----SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH-EEWEQVVIHRD  473 (670)
Q Consensus       402 H~nI--v~l~g~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~ivHrD  473 (670)
                      |+++  ..++++    +..+|||||+.+ |    +|.++...     .++..+..++.|++.+|.||| +   .+|+|||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~---~givHrD  196 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQE---AELVHAD  196 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence            8864  334432    357899999942 4    55555421     345677899999999999999 7   8999999


Q ss_pred             cCCCcEEecCCCcEEEEeecCceecc
Q 035655          474 VKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       474 Ikp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      |||+|||++.  .++|+|||+|....
T Consensus       197 lkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          197 LSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             CSTTSEEESS--SEEECCCTTCEETT
T ss_pred             CCHHHEEEcC--cEEEEECcccccCC
Confidence            9999999998  99999999997653

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B

Probab=99.44  E-value=1.2e-14  Score=107.88  Aligned_cols=45  Identities=33%  Similarity=0.478  Sum_probs=41.9

Q ss_pred             CcccccccCCcccccccceeeEeecCCceeeeEEEeccccccCCC
Q 035655          238 QPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNGA  282 (670)
Q Consensus       238 ~~~ls~~~dl~~~l~~~~~vGFsastg~~~~~h~i~sW~fs~~~~  282 (670)
                      +|+|+..+||+++|+|+||||||||||...|.|+|++|+|++++.
T Consensus         3 ~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~~~   47 (52)
T 2ltn_B            3 SYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSELS   47 (52)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEECCSSCCEEEEEEEEEEEEEC
T ss_pred             eeeEEEEEcHHHhcCceEEEEEEeccCCcceeEEEEEeEEEeecc
Confidence            378999999999999999999999999999999999999998653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.44  E-value=7e-14  Score=149.38  Aligned_cols=125  Identities=14%  Similarity=0.131  Sum_probs=88.7

Q ss_pred             CccccceEeeeCceeEEEeeccch-----------------------------HHHH--------HHHHHHHhccccCce
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTR-----------------------------MREF--------AAEIESLGRLRHKHL  405 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~-----------------------------~~~f--------~~Ei~~L~~l~H~nI  405 (670)
                      -|++.++||+|++|.||+|..+.+                             ....        .+|...|.++.+.++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            388999999999999999976431                             0111        134555555544333


Q ss_pred             eeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC
Q 035655          406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM  485 (670)
Q Consensus       406 v~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~  485 (670)
                      ....-+  .....+|||||+++++|.++...        +....++.|++.+|.|||+   .+||||||||.|||+++++
T Consensus       176 ~vp~p~--~~~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          176 PVPEPI--AQSRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             SCCCEE--EEETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred             CCCeee--eccCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence            211111  11234799999999998776421        1235688999999999998   8999999999999998877


Q ss_pred             ----------cEEEEeecCceeccC
Q 035655          486 ----------NARLGDFGLARLFDH  500 (670)
Q Consensus       486 ----------~~kL~DFGla~~~~~  500 (670)
                                .+.|+||+.+....+
T Consensus       243 d~~d~~~~~~~~~iID~~Q~V~~~h  267 (397)
T 4gyi_A          243 DAEDPSSITLTPIIIXFPQMVSMDH  267 (397)
T ss_dssp             CSSCTTSEEEEEEECCCTTCEETTS
T ss_pred             CcccccccccceEEEEeCCcccCCC
Confidence                      389999998875444

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A

Probab=99.30  E-value=3.8e-11  Score=118.24  Aligned_cols=181  Identities=18%  Similarity=0.166  Sum_probs=116.8

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      ..+.|+|.+. ++.|+||++ +++.|.++-+.|+.+            ..+|+.+|+|+|..... .+||||||.+...+
T Consensus        29 W~~~G~t~v~-~~~IrLTp~-~s~~G~lWs~~p~~~------------~~~weiev~Fri~G~~~-~~gdGlA~Wyt~~~   93 (226)
T 2a6v_A           29 WTLGDKVKLE-EGRFVLTPG-KNTKGSLWLKPEYSI------------KDAMTIEWTFRSFGFRG-STKGGLAFWLKQGN   93 (226)
T ss_dssp             EEEEETCEEE-TTEEESCCS-TTCEEEEEESSCBCC------------SSCEEEEEEEEEESCCS-CCSCEEEEEEECSC
T ss_pred             cEEcCCeEEe-CCEEEECCC-CCceEEEeeCCCCCC------------CCCeEEEEEEEEecCCC-CCCCEEEEEEECCC
Confidence            8999999997 789999999 999999999999964            14699999999997643 37999999999654


Q ss_pred             CCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecC-Ccccccc---cccccccCCCccccc-
Q 035655          122 SFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVN-SMKSIKL---EPAAYYENGTKEDFT-  196 (670)
Q Consensus       122 ~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvn-s~~s~~~---~~~~~~~~~~~~~~~-  196 (670)
                      ..   ..|...|-...      .-.=+||.|||+.| .      ...|-+-+| +-.+-..   ..++.-      ... 
T Consensus        94 ~~---~~g~vfGg~~d------~f~GlgI~~Dt~~n-~------~p~i~~~~NDGt~~yd~~~~~~~g~C------~~~~  151 (226)
T 2a6v_A           94 EG---DSTELFGGSSK------KFNGLMILLRLDDK-L------GESVTAYLNDGTKDLDIESSPYFASC------LFQY  151 (226)
T ss_dssp             CC---CCCTBTTTBCS------SCEEEEEEEEEETT-T------EEEEEEEEEESSSCCCTTTSCCSEEE------ECCC
T ss_pred             CC---CCcccccccCC------CccEEEEEEECCCC-C------CceEEEEECCCCcccCCCCCcccceE------eEec
Confidence            31   12222221000      01126999999976 1      122322222 2221111   111100      011 


Q ss_pred             cCCCCcEEEEEEec-CcccEEEEEEeecCCcccccccCCCCCCcccc-cccCCccccccc--ceeeEeecCCceeeeEEE
Q 035655          197 LESGDPVQAWIDYD-GVNRLVNVTICPMNKKNKLSFHFGKPSQPLLS-LPLDLSPAFQET--MYVGFSASTGRKVSSHFI  272 (670)
Q Consensus       197 l~~g~~~~a~I~Yd-~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls-~~~dl~~~l~~~--~~vGFsastg~~~~~h~i  272 (670)
                      ...+...+++|.|+ ...++|+|.+..  .             ..+. ..|    .||..  +|+||||+||...+.|.|
T Consensus       152 rn~~~~t~~ri~Y~~~~~~~l~v~id~--~-------------~Cf~~~~v----~LP~g~~~yfGiSAaTg~~~D~hdi  212 (226)
T 2a6v_A          152 QDSMVPSTLRLTYNPLDNHLLKLQMDN--R-------------VCFQTRKV----KFMGSSPFRIGTSAINDASKESFEI  212 (226)
T ss_dssp             SSCSSCEEEEEEEEGGGTSEEEEEETT--E-------------EEEEESCC----CGGGTSCBEEEEEEECCTTCCEEEE
T ss_pred             cCCCCCEEEEEEEEccCCCEEEEEEcC--C-------------eeEEECCe----ecCCCCccEEEEEEcCCCCcccEEE
Confidence            23467899999997 456789998741  1             1221 112    24444  499999999999999999


Q ss_pred             eccccc
Q 035655          273 LGWSFS  278 (670)
Q Consensus       273 ~sW~fs  278 (670)
                      ++-.+.
T Consensus       213 ls~~~~  218 (226)
T 2a6v_A          213 LKMKLY  218 (226)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            997665

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.95  E-value=1.4e-09  Score=110.13  Aligned_cols=131  Identities=14%  Similarity=0.049  Sum_probs=102.2

Q ss_pred             HhhcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEe
Q 035655          359 TATKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       359 ~~t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ....+|.....++.|+.+.||+....+              ....+.+|+.+++.+. +..+.++++++...+..++|||
T Consensus        11 ~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             HHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             HHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence            344567777778888888899875321              2345889999999995 6778899999988889999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcccc---------------------------------------
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE---------------------------------------  464 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~---------------------------------------  464 (670)
                      |++|.+|.+.+.       +......++.+++++|..||+.                                       
T Consensus        91 ~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (263)
T 3tm0_A           91 EADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP  163 (263)
T ss_dssp             CCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred             ecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence            999999987642       1122347889999999999971                                       


Q ss_pred             -----------------ccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          465 -----------------WEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       465 -----------------~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                                       ....++|+|++|.|||++++..+.|+||+.+.
T Consensus       164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                             11569999999999999876666799999775

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.77  E-value=7.6e-09  Score=104.08  Aligned_cols=126  Identities=16%  Similarity=0.121  Sum_probs=89.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCc--eeeeeeeeeccCeeEEEEeccCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKH--LVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~n--Iv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      .++......+.|..+.||+....+            ....+.+|+.+++.+++.+  +.++++++...+..++||||++|
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G   99 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   99 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCC
Confidence            344443332344558888876432            1245789999999997655  45688888888889999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccc------------------------------------------
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW------------------------------------------  465 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------------  465 (670)
                      .+|.  ...     ..   ...++.++++.|..||+..                                          
T Consensus       100 ~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
T 1nd4_A          100 QDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE  169 (264)
T ss_dssp             EETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred             cccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence            8884  211     11   2256777777777777621                                          


Q ss_pred             -------------cceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          466 -------------EQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       466 -------------~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                                   ...++|+|++|.||+++++..+.|+||+.+..
T Consensus       170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          170 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                         13499999999999998876678999998753

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.70  E-value=5e-08  Score=103.70  Aligned_cols=127  Identities=15%  Similarity=0.193  Sum_probs=97.8

Q ss_pred             cceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccc--cCceeeeeeeeecc---CeeEEEEec
Q 035655          367 SEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLR--HKHLVNLQGWCKRK---RDLLLVYDY  424 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~--H~nIv~l~g~~~~~---~~~~lV~E~  424 (670)
                      .+.|+.|.++.||+....+                 ....+.+|+.+++.|+  +..+.+++.++.+.   +..++||||
T Consensus        43 ~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~  122 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF  122 (359)
T ss_dssp             EEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred             EEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence            4667888888888764321                 1246778999999997  45678899988776   458999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccc---------------------------------------
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW---------------------------------------  465 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~---------------------------------------  465 (670)
                      +++..+.+..    ...++..++..++.++++.|+.||+..                                       
T Consensus       123 v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (359)
T 3dxp_A          123 VSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD  198 (359)
T ss_dssp             CCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred             cCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence            9998885422    124678888999999999999999720                                       


Q ss_pred             ----------------cceEEecccCCCcEEecCCCc--EEEEeecCcee
Q 035655          466 ----------------EQVVIHRDVKSGNVLIDADMN--ARLGDFGLARL  497 (670)
Q Consensus       466 ----------------~~~ivHrDIkp~NILld~~~~--~kL~DFGla~~  497 (670)
                                      ...++|+|+++.|||++.++.  +.|.||+.+..
T Consensus       199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                            268999999999999997753  69999999874

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.65  E-value=2.2e-08  Score=103.88  Aligned_cols=175  Identities=18%  Similarity=0.178  Sum_probs=116.3

Q ss_pred             cceEeeeCceeEEEeec------cc---hHHHHHHHHHHHhccc-cCc--eeeeeeeeeccC---eeEEEEeccCCCCch
Q 035655          367 SEVIGTGGFGEVYKGVL------PT---RMREFAAEIESLGRLR-HKH--LVNLQGWCKRKR---DLLLVYDYIPNGSLD  431 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~------~~---~~~~f~~Ei~~L~~l~-H~n--Iv~l~g~~~~~~---~~~lV~E~~~~gsL~  431 (670)
                      .+.++.|....||+...      +.   ....+.+|+.+|+.+. +..  +.+++..+...+   ..++|||+++|.+|.
T Consensus        25 i~~~~~G~~n~v~~v~~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~  104 (304)
T 3sg8_A           25 IEISGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLT  104 (304)
T ss_dssp             CCEEEECSSEEEEESTTSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECC
T ss_pred             eEecCCCCcceEEEECCEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECC
Confidence            45689999999997531      11   2457889999999884 322  445555544333   358899999998887


Q ss_pred             hhcccCCccccCHHHHHHHHHHHHHHhhhcccc-----------------------------------------------
Q 035655          432 SLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE-----------------------------------------------  464 (670)
Q Consensus       432 ~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-----------------------------------------------  464 (670)
                      +...    ..++..++..++.++++.|+.||+.                                               
T Consensus       105 ~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  180 (304)
T 3sg8_A          105 PLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDI  180 (304)
T ss_dssp             HHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred             cccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHH
Confidence            5432    2467777888888888888888851                                               


Q ss_pred             --------ccceEEecccCCCcEEecC--CCcEEEEeecCceeccCCCcceeeccccCcCC---CCcccccc-----CC-
Q 035655          465 --------WEQVVIHRDVKSGNVLIDA--DMNARLGDFGLARLFDHGKISHTTNVVGTIGY---IAPELART-----GK-  525 (670)
Q Consensus       465 --------~~~~ivHrDIkp~NILld~--~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y---~aPE~~~~-----~~-  525 (670)
                              ....++|+|++|.||++++  ...+.|+||+.+.......     .......+   ..|+....     +. 
T Consensus       181 l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-----Dl~~~~~~~~~~~~~~~~~~l~~Y~~~  255 (304)
T 3sg8_A          181 LENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-----DFISLMEDDEEYGMEFVSKILNHYKHK  255 (304)
T ss_dssp             HTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-----HHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred             HhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-----HHHHHHhhccccCHHHHHHHHHHcCCC
Confidence                    1246899999999999998  5568999999987543211     01111111   22321110     11 


Q ss_pred             --------CCccchhHHHHHHHHHHHhCCCCCC
Q 035655          526 --------ASCSTDVFAYGVLLLEIATGRRPID  550 (670)
Q Consensus       526 --------~t~ksDV~S~Gvvl~el~tG~~pf~  550 (670)
                              .....+.|+++.+++++.+|+.+|.
T Consensus       256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence                    1123689999999999999987753

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.87  E-value=9.1e-05  Score=76.66  Aligned_cols=127  Identities=19%  Similarity=0.147  Sum_probs=85.3

Q ss_pred             cceEeeeCceeEEEee------ccc---hHHHHHHHHHHHhccccC---ceeeeeeeee-ccCeeEEEEeccCCCCchhh
Q 035655          367 SEVIGTGGFGEVYKGV------LPT---RMREFAAEIESLGRLRHK---HLVNLQGWCK-RKRDLLLVYDYIPNGSLDSL  433 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~------~~~---~~~~f~~Ei~~L~~l~H~---nIv~l~g~~~-~~~~~~lV~E~~~~gsL~~~  433 (670)
                      .+.++.|....||+.-      .+.   ....+.+|+.+|+.|.+.   .+.+.+.++. ..+..++|||+++|.+|.+.
T Consensus        24 v~~l~~G~~n~v~~vg~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~  103 (306)
T 3tdw_A           24 VESLGEGFRNYAILVNGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGED  103 (306)
T ss_dssp             EEEEEECSSEEEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHH
T ss_pred             eeecCCCcceeEEEECCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchh
Confidence            4567777777888651      111   245788999999999753   3566777764 44567899999999888763


Q ss_pred             cccCCccccCHHHHHHHHHHHHHHhhhcccc-------------------------------------------------
Q 035655          434 LFDNENFVLSWEQRFNIIKGIAAGLLYLHEE-------------------------------------------------  464 (670)
Q Consensus       434 l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-------------------------------------------------  464 (670)
                      ..    ..++..++..++.++++.|+.||+.                                                 
T Consensus       104 ~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~  179 (306)
T 3tdw_A          104 GM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSY  179 (306)
T ss_dssp             HH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHH
T ss_pred             hh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHH
Confidence            21    1233444444555555555544431                                                 


Q ss_pred             --------ccceEEecccCCCcEEecC---CCc-EEEEeecCcee
Q 035655          465 --------WEQVVIHRDVKSGNVLIDA---DMN-ARLGDFGLARL  497 (670)
Q Consensus       465 --------~~~~ivHrDIkp~NILld~---~~~-~kL~DFGla~~  497 (670)
                              ....++|+|+++.||+++.   ++. +.|+||+.+..
T Consensus       180 l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          180 MTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                    1246899999999999987   455 48999998864

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.69  E-value=9.9e-05  Score=74.48  Aligned_cols=105  Identities=22%  Similarity=0.231  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcccc-
Q 035655          387 MREFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE-  464 (670)
Q Consensus       387 ~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-  464 (670)
                      ..++.+|...|+.|. +--+.++++++.+.+..++|||++++.++.+....      .......++.+++..|.-||+. 
T Consensus        63 ~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~------~~~~~~~~~~~l~~~L~~Lh~~~  136 (272)
T 4gkh_A           63 ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE------YPDSGENIVDALAVFLRRLHSIP  136 (272)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH------CGGGHHHHHHHHHHHHHHHHTSC
T ss_pred             HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC------CHHHHHHHHHHHHHHHHHhcCCC
Confidence            457889999999885 33467888999988999999999999887765422      1122334555555655555531 


Q ss_pred             ------------------------------------------------------ccceEEecccCCCcEEecCCCcEEEE
Q 035655          465 ------------------------------------------------------WEQVVIHRDVKSGNVLIDADMNARLG  490 (670)
Q Consensus       465 ------------------------------------------------------~~~~ivHrDIkp~NILld~~~~~kL~  490 (670)
                                                                            ....++|+|+++.|||+++++.+-|+
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~vi  216 (272)
T 4gkh_A          137 VCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCI  216 (272)
T ss_dssp             GGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEEC
T ss_pred             cccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEE
Confidence                                                                  12358999999999999987777899


Q ss_pred             eecCcee
Q 035655          491 DFGLARL  497 (670)
Q Consensus       491 DFGla~~  497 (670)
                      ||+.+..
T Consensus       217 Dwe~a~~  223 (272)
T 4gkh_A          217 DVGRVGI  223 (272)
T ss_dssp             CCTTCEE
T ss_pred             ECccccc
Confidence            9998753

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.62  E-value=0.00014  Score=76.70  Aligned_cols=46  Identities=7%  Similarity=0.069  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHhcccc---Cceeeeeeeeecc---CeeEEEEeccCCCCchhh
Q 035655          388 REFAAEIESLGRLRH---KHLVNLQGWCKRK---RDLLLVYDYIPNGSLDSL  433 (670)
Q Consensus       388 ~~f~~Ei~~L~~l~H---~nIv~l~g~~~~~---~~~~lV~E~~~~gsL~~~  433 (670)
                      ..+.+|+.+++.|..   -.+.+++.++.+.   +..++||||++|..+.+.
T Consensus        72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~~  123 (357)
T 3ats_A           72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDV  123 (357)
T ss_dssp             CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCBT
T ss_pred             hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhhc
Confidence            457899999999853   3567788887665   357899999999887653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.17  E-value=0.0013  Score=68.27  Aligned_cols=31  Identities=19%  Similarity=0.308  Sum_probs=28.2

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ...++|+|+++.|||++.++.+.|+||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            4789999999999999888899999999775

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.77  E-value=0.005  Score=63.73  Aligned_cols=127  Identities=16%  Similarity=0.140  Sum_probs=81.9

Q ss_pred             ccceEeeeCceeEEEeeccc-----------hHHHHHHHHHHHhcccc---CceeeeeeeeeccCeeEEEEeccCCCCch
Q 035655          366 QSEVIGTGGFGEVYKGVLPT-----------RMREFAAEIESLGRLRH---KHLVNLQGWCKRKRDLLLVYDYIPNGSLD  431 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~L~~l~H---~nIv~l~g~~~~~~~~~lV~E~~~~gsL~  431 (670)
                      ..+.|+.|....+|+.....           ....|..|...|+.|..   ..+.+++.++...+..++||||+++..+.
T Consensus        40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~  119 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNK  119 (312)
T ss_dssp             EEEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCC
T ss_pred             eeEEeCCccceeeeEEEECCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCC
Confidence            35677888888888764321           34568899999998853   56888899888888899999999998763


Q ss_pred             hh-----------cccCCc--------------------cccCHHHHH---HHHH----------------HHHHHh-hh
Q 035655          432 SL-----------LFDNEN--------------------FVLSWEQRF---NIIK----------------GIAAGL-LY  460 (670)
Q Consensus       432 ~~-----------l~~~~~--------------------~~l~~~~~~---~i~~----------------qia~gL-~y  460 (670)
                      .-           |+....                    ..-+|....   ++..                .++..+ ..
T Consensus       120 ~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~  199 (312)
T 3jr1_A          120 QSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADT  199 (312)
T ss_dssp             TTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence            21           121110                    012454322   1111                111111 22


Q ss_pred             ccc-cccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          461 LHE-EWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       461 LH~-~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                      |.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus       200 L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          200 LSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             hccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            321 2247899999999999999887 8888874

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.72  E-value=0.003  Score=67.45  Aligned_cols=31  Identities=19%  Similarity=0.395  Sum_probs=26.7

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      ...++|+|+.+.|||++.+ .+++.||..+..
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence            3789999999999999876 589999988764

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=95.97  E-value=0.021  Score=58.73  Aligned_cols=129  Identities=17%  Similarity=0.108  Sum_probs=70.0

Q ss_pred             ceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCce--eeeeee------eeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHL--VNLQGW------CKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nI--v~l~g~------~~~~~~~~lV~E~~~~  427 (670)
                      +.|+.|....+|+....+            ....+..|+.+++.|...++  .+++..      ....+..+++++|++|
T Consensus        28 ~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G  107 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLEG  107 (322)
T ss_dssp             EEECC---EEEEEEEESSCCEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCCC
T ss_pred             eccCCCcccceEEEEeCCccEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeCCC
Confidence            445556667777654221            23467788888888854332  333321      1123567899999998


Q ss_pred             CCchhh--------------cccC------Cc----cccCHHHHHHH------------HHHHHHHhhhccc----cccc
Q 035655          428 GSLDSL--------------LFDN------EN----FVLSWEQRFNI------------IKGIAAGLLYLHE----EWEQ  467 (670)
Q Consensus       428 gsL~~~--------------l~~~------~~----~~l~~~~~~~i------------~~qia~gL~yLH~----~~~~  467 (670)
                      ..+...              ++..      ..    ....|...+.-            ...+...+..+++    ....
T Consensus       108 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~  187 (322)
T 2ppq_A          108 MWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPA  187 (322)
T ss_dssp             BCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCE
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCCc
Confidence            765321              1110      00    00123321110            0112333333432    1246


Q ss_pred             eEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          468 VVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       468 ~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      +++|+|+++.|||++++..+.|+||+.+.
T Consensus       188 ~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          188 GVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            89999999999999987666899999775

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=95.93  E-value=0.023  Score=58.11  Aligned_cols=31  Identities=19%  Similarity=0.218  Sum_probs=26.4

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      ...++|+|+.+.||+ ..++.+.++||..+..
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            367999999999999 5667889999998864

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=95.91  E-value=0.023  Score=55.10  Aligned_cols=101  Identities=15%  Similarity=0.093  Sum_probs=65.0

Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      -||.++|.... .++++++++.++.|.+..|.-+-.. ... ..+=+.|..|+|..+|.|.+.+ ..+.           
T Consensus        33 vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~-----------   97 (229)
T 2yle_A           33 LSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADD-----------   97 (229)
T ss_dssp             EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred             ccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-cccc-----------
Confidence            47888886544 5899999999999999998776110 001 1223457899999999998764 1110           


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCC
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGR  546 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~  546 (670)
                        .....+.|||... ...+.+.=|||+|+++|.-+--.
T Consensus        98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg  133 (229)
T 2yle_A           98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG  133 (229)
T ss_dssp             -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred             --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC
Confidence              1122456888753 34568889999999999987633

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=95.70  E-value=0.015  Score=62.93  Aligned_cols=40  Identities=28%  Similarity=0.353  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHhccccCce-eeeeeeeeccCeeEEEEeccCCCCch
Q 035655          388 REFAAEIESLGRLRHKHL-VNLQGWCKRKRDLLLVYDYIPNGSLD  431 (670)
Q Consensus       388 ~~f~~Ei~~L~~l~H~nI-v~l~g~~~~~~~~~lV~E~~~~gsL~  431 (670)
                      ..+.+|..+++.|...++ .++++.+.+    .+|+||+++.+|.
T Consensus       120 ~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l~G~~l~  160 (429)
T 1nw1_A          120 SHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRPLS  160 (429)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEECC
T ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEeCCcccC
Confidence            567789999999865444 566776543    2899999875553

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=95.70  E-value=0.022  Score=59.07  Aligned_cols=33  Identities=30%  Similarity=0.384  Sum_probs=28.6

Q ss_pred             cceEEecccCCCcEEecCC----CcEEEEeecCceec
Q 035655          466 EQVVIHRDVKSGNVLIDAD----MNARLGDFGLARLF  498 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~----~~~kL~DFGla~~~  498 (670)
                      ...++|+|+.+.|||++.+    ..+.|+||+.+..-
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            3689999999999999875    68999999988643

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.13  E-value=0.061  Score=54.44  Aligned_cols=65  Identities=18%  Similarity=0.217  Sum_probs=45.6

Q ss_pred             CccccceEeeeCceeEEEeeccch---------------HHHHHHHHHHHhccccC---ceeeeeeeeeccCeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTR---------------MREFAAEIESLGRLRHK---HLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~---------------~~~f~~Ei~~L~~l~H~---nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .....+.+|.|..+.||+....++               ...|.+|+..|+.|...   -+.+++++.    .-++||||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence            455578899999999999876441               23578999999988532   344555543    34789999


Q ss_pred             cCCCCch
Q 035655          425 IPNGSLD  431 (670)
Q Consensus       425 ~~~gsL~  431 (670)
                      ++.+...
T Consensus        92 l~~~~~~   98 (288)
T 3f7w_A           92 VDERPPT   98 (288)
T ss_dssp             CCCCCCC
T ss_pred             ecccCCC
Confidence            9876543

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=94.62  E-value=0.11  Score=55.11  Aligned_cols=107  Identities=21%  Similarity=0.213  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHHhccccCc-eeeeeeeeeccCeeEEEEeccCCCCchhh-c----------------ccCC---cccc--C
Q 035655          387 MREFAAEIESLGRLRHKH-LVNLQGWCKRKRDLLLVYDYIPNGSLDSL-L----------------FDNE---NFVL--S  443 (670)
Q Consensus       387 ~~~f~~Ei~~L~~l~H~n-Iv~l~g~~~~~~~~~lV~E~~~~gsL~~~-l----------------~~~~---~~~l--~  443 (670)
                      .....+|..+++.|...+ ..++++.+.++    +|+||++|..|..- +                +...   ....  -
T Consensus        97 ~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l  172 (379)
T 3feg_A           97 VDSLVLESVMFAILAERSLGPQLYGVFPEG----RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWL  172 (379)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSCCEEEEETTE----EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccH
Confidence            456779999999885333 35667666542    89999998766421 1                1110   1112  2


Q ss_pred             HHHHHHHHHHHHHH-------------------hhhccc-----cccceEEecccCCCcEEecCC----CcEEEEeecCc
Q 035655          444 WEQRFNIIKGIAAG-------------------LLYLHE-----EWEQVVIHRDVKSGNVLIDAD----MNARLGDFGLA  495 (670)
Q Consensus       444 ~~~~~~i~~qia~g-------------------L~yLH~-----~~~~~ivHrDIkp~NILld~~----~~~kL~DFGla  495 (670)
                      |.++.++..++...                   +..|.+     .....++|+|+.+.||+++.+    +.+.++||..+
T Consensus       173 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a  252 (379)
T 3feg_A          173 FGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS  252 (379)
T ss_dssp             HHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred             HHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence            45555555554321                   222211     124679999999999999876    78999999987


Q ss_pred             ee
Q 035655          496 RL  497 (670)
Q Consensus       496 ~~  497 (670)
                      ..
T Consensus       253 ~~  254 (379)
T 3feg_A          253 SY  254 (379)
T ss_dssp             EE
T ss_pred             Cc
Confidence            53

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=93.39  E-value=0.1  Score=54.81  Aligned_cols=31  Identities=26%  Similarity=0.404  Sum_probs=25.7

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      ...++|+|+++.|||++++. +.|+||..+..
T Consensus       211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             CEEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             CeEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            46799999999999998654 89999988753

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=91.11  E-value=0.21  Score=53.43  Aligned_cols=77  Identities=14%  Similarity=0.127  Sum_probs=46.6

Q ss_pred             ceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeecc-ccCcCCCCccccccC---CCCccchhHHHHHHHHHH
Q 035655          467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV-VGTIGYIAPELARTG---KASCSTDVFAYGVLLLEI  542 (670)
Q Consensus       467 ~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~---~~t~ksDV~S~Gvvl~el  542 (670)
                      ..++|+|+++.|||++.++ ++++||+.+..-.... ...... .-...|++|+.....   ......++......+|+.
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~-Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF-DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL  309 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH-HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH-HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            8999999999999998876 9999999887543210 000000 001345666544311   112235555777777777


Q ss_pred             HhC
Q 035655          543 ATG  545 (670)
Q Consensus       543 ~tG  545 (670)
                      +++
T Consensus       310 y~~  312 (420)
T 2pyw_A          310 FNK  312 (420)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            664

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=86.64  E-value=2.4  Score=40.76  Aligned_cols=116  Identities=10%  Similarity=0.068  Sum_probs=80.1

Q ss_pred             ccCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEE
Q 035655          401 RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVL  480 (670)
Q Consensus       401 ~H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NIL  480 (670)
                      .||+++.. .+-.+.+.+.+.|+.-+.  ...|-.   -..++...+++++.+|+....+++.     -+|--++|+||+
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~  111 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELF  111 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTT--SEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEE
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcc--cCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEE
Confidence            57888876 455566677776665542  222211   1357888999999999998877775     367889999999


Q ss_pred             ecCCCcEEEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 035655          481 IDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPID  550 (670)
Q Consensus       481 ld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~  550 (670)
                      ++.++.+++.-.|+-..                  ++|.     ..+...=.-.+=|++..+++++..|+
T Consensus       112 f~~~~~p~i~~RGik~~------------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          112 FTRDGLPIAKTRGLQNV------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             ECTTSCEEESCCEETTT------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             EcCCCCEEEEEccCccC------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            99999999987775432                  2222     11222223467789999999999886

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=85.52  E-value=0.74  Score=47.00  Aligned_cols=30  Identities=30%  Similarity=0.413  Sum_probs=26.2

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      ...++|+|+++.|||++ + .+.|+||+.+..
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            36789999999999999 4 899999988753

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=84.64  E-value=2.3  Score=45.54  Aligned_cols=31  Identities=26%  Similarity=0.477  Sum_probs=27.3

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      ...++|+|+.+.||+ +.++.+.++||..+..
T Consensus       261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            367899999999999 8888999999998863

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=84.35  E-value=1.1  Score=48.49  Aligned_cols=17  Identities=29%  Similarity=0.382  Sum_probs=15.5

Q ss_pred             cceEEecccCCCcEEec
Q 035655          466 EQVVIHRDVKSGNVLID  482 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld  482 (670)
                      ...++|+|+.+.|||++
T Consensus       289 ~~v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          289 PIVLCHCDLLSSNIINT  305 (458)
T ss_dssp             CEEEECSCCCGGGEEEC
T ss_pred             CeeEEecCCCCCcEEee
Confidence            36799999999999998

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=83.61  E-value=1  Score=46.57  Aligned_cols=32  Identities=28%  Similarity=0.471  Sum_probs=28.6

Q ss_pred             cceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       466 ~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      ...++|+|+.+.||++++++.+.|.||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            47899999999999999888999999987764

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=83.60  E-value=0.69  Score=49.16  Aligned_cols=31  Identities=29%  Similarity=0.464  Sum_probs=25.7

Q ss_pred             ceEEecccCCCcEEe------cCCCcEEEEeecCcee
Q 035655          467 QVVIHRDVKSGNVLI------DADMNARLGDFGLARL  497 (670)
Q Consensus       467 ~~ivHrDIkp~NILl------d~~~~~kL~DFGla~~  497 (670)
                      ..++|+|+.+.|||+      +++..++++||..|..
T Consensus       244 ~vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            356899999999999      4566799999998853

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=82.73  E-value=0.68  Score=32.52  Aligned_cols=23  Identities=22%  Similarity=0.197  Sum_probs=10.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhh
Q 035655          315 LSTVAVILLGTLLIFKLYRRIAQ  337 (670)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~rr~~~  337 (670)
                      ++.+++++++++++++++||+++
T Consensus        18 VgGv~~~~ii~~~~~~~~RRr~~   40 (44)
T 2ks1_B           18 VGALLLLLVVALGIGLFMRRRHI   40 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hHHHHHHHHHHHHHHHHhhhhHh
Confidence            33344444444555555555543

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=81.26  E-value=0.7  Score=32.41  Aligned_cols=23  Identities=13%  Similarity=0.187  Sum_probs=11.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhh
Q 035655          315 LSTVAVILLGTLLIFKLYRRIAQ  337 (670)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~rr~~~  337 (670)
                      ++.+++++++++.+++++||+++
T Consensus        17 VgGv~~v~ii~~~~~~~~RRRr~   39 (44)
T 2l2t_A           17 IGGLFILVIVGLTFAVYVRRKSI   39 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             hHHHHHHHHHHHHHHHHhhhhhh
Confidence            33334444444555555555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	670
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-61
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	9e-59
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-57
d1qnwa_	237	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	3e-56
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-56
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-56
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-55
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-55
d1g9fa_	251	b.29.1.1 (A:) Legume lectin {Soybean (Glycine max)	7e-55
d1gzca_	239	b.29.1.1 (A:) Legume lectin {Cockspur coral tree (	4e-54
d1hqla_	236	b.29.1.1 (A:) Legume lectin {Griffonia simplicifol	5e-54
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-54
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-54
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-53
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-53
d1g7ya_	253	b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos	2e-52
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-52
d2d3sa1	237	b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso	9e-52
d1g8wa_	233	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	9e-52
d1f9ka_	234	b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca	2e-51
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-51
d1v6ia_	232	b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog	9e-51
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-50
d1avba_	226	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	2e-50
d1fx5a_	240	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	4e-50
d1ukga_	241	b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero	6e-50
d1n47a_	233	b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi	7e-50
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-50
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-49
d1fnya_	237	b.29.1.1 (A:) Legume lectin {Black locust (Robinia	4e-49
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-49
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-49
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-48
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-48
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-48
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-48
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-48
g1qmo.1	230	b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich	4e-48
d1dbna_	239	b.29.1.1 (A:) Legume lectin {Maackia amurensis, le	6e-48
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-47
g2ltn.1	229	b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum	3e-47
d1leda_	243	b.29.1.1 (A:) Legume lectin {West-central african	3e-47
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-46
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-46
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-46
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-45
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-45
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-44
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-43
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-42
d1ioaa_	228	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	1e-41
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-41
d1dhkb_	204	b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar	2e-40
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-40
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-40
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-39
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-39
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-39
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-39
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-36
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-36
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-36
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-35
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-35
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-35
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-34
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-34
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-34
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-34
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-34
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-34
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-34
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	5e-32
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	2e-19
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	8e-32
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-31
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-30
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-30
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-28
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-28
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-27
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-26
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-23
d1gv9a_	228	b.29.1.13 (A:) Carbohydrate-recognition domain of	8e-22
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-21
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-17
d2a6va1	218	b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake	5e-07
d2a6za1	221	b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake	6e-06

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (520), Expect = 1e-61
 Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 46/293 (15%)

Query: 342 EDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL---------------PTR 386
           +DWE+    +                + IG+G FG VYKG                 P +
Sbjct: 1   DDWEIP-DGQITVG------------QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ 47

Query: 387 MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQ 446
           ++ F  E+  L + RH +++   G+      L +V  +    SL   L   E       +
Sbjct: 48  LQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETK-FEMIK 105

Query: 447 RFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH- 505
             +I +  A G+ YLH +    +IHRD+KS N+ +  D+  ++GDFGLA +      SH 
Sbjct: 106 LIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162

Query: 506 TTNVVGTIGYIAPELART---GKASCSTDVFAYGVLLLEIATGRRPI-DSDHFILVDWVL 561
              + G+I ++APE+ R       S  +DV+A+G++L E+ TG+ P  + ++   + +++
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222

Query: 562 EFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
              +L   L  V  N          + + +L   C  +K + RP   Q+L  +
Sbjct: 223 GRGYLSPDLSKVRSNC--------PKAMKRLMAECLKKKRDERPLFPQILASI 267

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (501), Expect = 9e-59
 Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 42/287 (14%)

Query: 342 EDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTR--------------M 387
           ++WE+      +              E +G G FGEV+ G                    
Sbjct: 6   DEWEVP-RETLKLV------------ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP 52

Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
             F AE   + +L+H+ LV L      +  + ++ +Y+ NGSL   L       L+  + 
Sbjct: 53  DAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 111

Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT 507
            ++   IA G+ ++ E      IHRD+++ N+L+   ++ ++ DFGLARL +  + +   
Sbjct: 112 LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168

Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG 567
                I + APE    G  +  +DV+++G+LL EI T  R                Q+L 
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM----TNPEVIQNLE 224

Query: 568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           +   +V P+          E + QL  LC  ++ E RPT   +   L
Sbjct: 225 RGYRMVRPDNCP-------EELYQLMRLCWKERPEDRPTFDYLRSVL 264

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (492), Expect = 1e-57
 Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 29/265 (10%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTR--------------MREFAAEIESLGRLRHKHLVNLQ 409
               + IG+G FG V+ G    +                +F  E E + +L H  LV L 
Sbjct: 7   LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLY 66

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
           G C  +  + LV++++ +G L       +  + + E    +   +  G+       E  V
Sbjct: 67  GVCLEQAPICLVFEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGM---AYLEEACV 122

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           IHRD+ + N L+  +   ++ DFG+ R     + + +T     + + +PE+    + S  
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182

Query: 530 TDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELV 589
           +DV+++GVL+ E+ +  +    +           + +     +  P L S++V       
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENR----SNSEVVEDISTGFRLYKPRLASTHVY------ 232

Query: 590 LQLGLLCSHQKAEARPTMRQVLRYL 614
            Q+   C  ++ E RP   ++LR L
Sbjct: 233 -QIMNHCWKERPEDRPAFSRLLRQL 256

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

 Score =  189 bits (480), Expect = 3e-56
 Identities = 67/260 (25%), Positives = 106/260 (40%), Gaps = 36/260 (13%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV---IGHAFYNKPIQMLDKSTS 83
           F F+ F   + N   I  +  + +  +G L++T  +      IG A Y  PIQ+ D  T 
Sbjct: 6   FNFDKFVPNQKN---IIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSIT- 61

Query: 84  LSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKP 143
                  +SF+T F F +    S      LAF ++P  S     +   +  L S++D K 
Sbjct: 62  ----GKVASFATSFSFVVKADKSDGVDG-LAFFLAPANSQIPSGSSAGMFGLFSSSDSKS 116

Query: 144 SNHLFAIEFDTV-NGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDP 202
           SN + A+EFDT         D    H+GI+VNS+KSIK              +   +G+ 
Sbjct: 117 SNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVK-----------WDWRNGEV 165

Query: 203 VQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAS 262
               I Y    + + V +                +  +++  +DL     E + VGFS  
Sbjct: 166 ADVVITYRAPTKSLTVCLSYP----------SDGTSNIITASVDLKAILPEWVSVGFSGG 215

Query: 263 TGRKV--SSHFILGWSFSMN 280
            G      +H +L W F+ N
Sbjct: 216 VGNAAEFETHDVLSWYFTSN 235

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  189 bits (481), Expect = 7e-56
 Identities = 68/287 (23%), Positives = 115/287 (40%), Gaps = 42/287 (14%)

Query: 342 EDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPT--------------RM 387
           + WE+      R                +G G FGEV+ G                    
Sbjct: 10  DAWEIP-RESLRLE------------VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP 56

Query: 388 REFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQR 447
             F  E + + +LRH+ LV L      +  + +V +Y+  GSL   L       L   Q 
Sbjct: 57  EAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL 115

Query: 448 FNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT 507
            ++   IA+G+ Y+        +HRD+++ N+L+  ++  ++ DFGLARL +  + +   
Sbjct: 116 VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172

Query: 508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG 567
                I + APE A  G+ +  +DV+++G+LL E+ T  R                    
Sbjct: 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-----------VNR 221

Query: 568 QVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           +VLD V+            E +  L   C  ++ E RPT   +  +L
Sbjct: 222 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 268

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  189 bits (482), Expect = 8e-56
 Identities = 68/297 (22%), Positives = 133/297 (44%), Gaps = 48/297 (16%)

Query: 352 FRYSDLYTATKGFKQS---------EVIGTGGFGEVYKGVL------------------- 383
           F + D   A + F +          +VIG G FGEV  G L                   
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 384 -PTRMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVL 442
              + R+F +E   +G+  H ++++L+G   +   ++++ +++ NGSLDS L  N+    
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF- 125

Query: 443 SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK 502
           +  Q   +++GIAAG+ YL +      +HRD+ + N+L+++++  ++ DFGL+R  +   
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 182

Query: 503 ISHTTN----VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVD 558
              T          I + APE  +  K + ++DV++YG+++ E+ +       D      
Sbjct: 183 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD------ 236

Query: 559 WVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                     V++ ++ +      +     + QL L C  +    RP   Q++  L+
Sbjct: 237 -----MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  187 bits (476), Expect = 5e-55
 Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 29/281 (10%)

Query: 349 PHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLP---------------TRMREFAAE 393
           P    Y               +G G +GEVY+GV                   + EF  E
Sbjct: 4   PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 63

Query: 394 IESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKG 453
              +  ++H +LV L G C R+    ++ +++  G+L   L +     +S      +   
Sbjct: 64  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 123

Query: 454 IAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTI 513
           I++ + YL +   +  IHRD+ + N L+  +   ++ DFGL+RL      +        I
Sbjct: 124 ISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 180

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV 573
            + APE     K S  +DV+A+GVLL EIAT                     L QV +++
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----------DLSQVYELL 229

Query: 574 DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           + +          E V +L   C       RP+  ++ +  
Sbjct: 230 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (472), Expect = 7e-55
 Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 31/266 (11%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRM--------------REFAAEIESLGRLRHKHLVNLQ 409
               + +GTG FG V  G    +                EF  E + +  L H+ LV L 
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 65

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
           G C ++R + ++ +Y+ NG L + L +  +     +Q   + K +   + YL  +     
Sbjct: 66  GVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ---F 121

Query: 470 IHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
           +HRD+ + N L++     ++ DFGL+R     + + +      + +  PE+    K S  
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181

Query: 530 TDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMEL 588
           +D++A+GVL+ EI + G+ P +             +H+ Q L +  P+L S       E 
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSET-----AEHIAQGLRLYRPHLAS-------EK 229

Query: 589 VLQLGLLCSHQKAEARPTMRQVLRYL 614
           V  +   C H+KA+ RPT + +L  +
Sbjct: 230 VYTIMYSCWHEKADERPTFKILLSNI 255

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  185 bits (471), Expect = 7e-55
 Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 44/271 (16%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLDK 80
           F +N F   + N   +  +  +I+  SG L+L     N       +G A Y+ PI + DK
Sbjct: 6   FSWNKFVPKQPN---MILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDK 62

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
            T      + +SF+  F F    P++ +   GLAF ++P  + P      + G L   N+
Sbjct: 63  ET-----GSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQT----HAGYLGLFNE 113

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
           ++  + + A+EFDT   +  + D    H+GINVNS++SIK              + L + 
Sbjct: 114 NESGDQVVAVEFDT---FRNSWDPPNPHIGINVNSIRSIKTTS-----------WDLANN 159

Query: 201 DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS 260
              +  I YD    L+  ++   +++             +LS  +DL  +  E + +GFS
Sbjct: 160 KVAKVLITYDASTSLLVASLVYPSQRTS----------NILSDVVDLKTSLPEWVRIGFS 209

Query: 261 ASTGRKV--SSHFILGWSFSMNGAAPSLNLS 289
           A+TG  +   SH +L WSF+ N    S N+ 
Sbjct: 210 AATGLDIPGESHDVLSWSFASNLPHASSNID 240

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

 Score =  183 bits (465), Expect = 4e-54
 Identities = 71/265 (26%), Positives = 114/265 (43%), Gaps = 43/265 (16%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F+ F     N   +T + A+++  SG L+LT    N        G   Y KP+ M D 
Sbjct: 6   FSFSEFEPGNDN---LTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDS 62

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGF-GLAFTVSPQPSFPGGKAEHYLGILNSTN 139
           +T        +SF T F F I  P +      GL F + P  S P      YLG+ N++ 
Sbjct: 63  TT-----GTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQ-GYGYLGVFNNSK 116

Query: 140 DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLES 199
               S    A+EFDT +  N     Q  H+GI+VNS++SIK +P           F L++
Sbjct: 117 QD-NSYQTLAVEFDTFS--NPWDPPQVPHIGIDVNSIRSIKTQP-----------FQLDN 162

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF 259
           G      I YD  +++++V +   +            +   ++  +D+     + + VG 
Sbjct: 163 GQVANVVIKYDAPSKILHVVLVYPSS----------GAIYTIAEIVDVKQVLPDWVDVGL 212

Query: 260 SASTGRK---VSSHFILGWSFSMNG 281
           S +TG +     +H +  WSF  + 
Sbjct: 213 SGATGAQRDAAETHDVYSWSFQASL 237

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

 Score =  182 bits (464), Expect = 5e-54
 Identities = 72/261 (27%), Positives = 106/261 (40%), Gaps = 36/261 (13%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F  F        +I +  A+    +G L+L              G A Y+ P+Q+ D 
Sbjct: 4   FTFPNFWSD-VEDSIIFQGDANT--TAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDN 60

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
            T      + +SF T F F +    +G    GLAF ++P  S      E+      ST  
Sbjct: 61  KTE-----SVASFYTEFTFFLKITGNG-PADGLAFFLAPPDSDVKDAGEYLGLFNKSTAT 114

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
               N + A+EFDT        +    H+GINVNS+ S+             ED  + SG
Sbjct: 115 QPSKNQVVAVEFDTWTNP-NFPEPSYRHIGINVNSIVSVA--------TKRWEDSDIFSG 165

Query: 201 DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS 260
               A I YDG   ++ V +            +   S  +LS  +D+     E++ VG S
Sbjct: 166 KIATARISYDGSAEILTVVL-----------SYPDGSDYILSHSVDMRQNLPESVRVGIS 214

Query: 261 ASTGR-KVSSHFILGWSFSMN 280
           ASTG  +  + +IL W FS N
Sbjct: 215 ASTGNNQFLTVYILSWRFSSN 235

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (469), Expect = 6e-54
 Identities = 66/288 (22%), Positives = 113/288 (39%), Gaps = 43/288 (14%)

Query: 368 EVIGTGGFGEVYKGVLPTRM-------------REFAAEIESLGRLRHKHLVNLQGWCKR 414
           E IG G FGEV++G                       AEI     LRH++++       +
Sbjct: 9   ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 68

Query: 415 KRD----LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE-----W 465
                  L LV DY  +GSL   L     + ++ E    +    A+GL +LH E      
Sbjct: 69  DNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG 125

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH---TTNVVGTIGYIAPELAR 522
           +  + HRD+KS N+L+  +    + D GLA   D    +      + VGT  Y+APE+  
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD 185

Query: 523 T------GKASCSTDVFAYGVLLLEIATGRRPIDSD--------HFILVDWVLEFQHLGQ 568
                   ++    D++A G++  EIA                   +  D  +E      
Sbjct: 186 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV 245

Query: 569 VLDVVDPNLGSSYVVAE-MELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
               + PN+ + +   E + ++ ++   C +    AR T  ++ + L+
Sbjct: 246 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 9e-54
 Identities = 68/264 (25%), Positives = 102/264 (38%), Gaps = 31/264 (11%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRLRHKHLVNLQGW 411
            K  + IG G FG+V  G                  + F AE   + +LRH +LV L G 
Sbjct: 9   LKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGV 68

Query: 412 C-KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
             + K  L +V +Y+  GSL   L      VL  +        +   + YL        +
Sbjct: 69  IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FV 125

Query: 471 HRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           HRD+ + NVL+  D  A++ DFGL +       S        + + APE  R  K S  +
Sbjct: 126 HRDLAARNVLVSEDNVAKVSDFGLTKEAS----STQDTGKLPVKWTAPEALREKKFSTKS 181

Query: 531 DVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
           DV+++G+LL EI +  R                  L  V+  V+              V 
Sbjct: 182 DVWSFGILLWEIYSFGRVPYPR-----------IPLKDVVPRVEKGYKMDAPDGCPPAVY 230

Query: 591 QLGLLCSHQKAEARPTMRQVLRYL 614
           ++   C H  A  RP+  Q+   L
Sbjct: 231 EVMKNCWHLDAAMRPSFLQLREQL 254

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 2e-53
 Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 40/289 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRH 402
             + +VIG G FGEVYKG+L T                     +  +F  E   +G+  H
Sbjct: 9   VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 68

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            +++ L+G   + + ++++ +Y+ NG+LD  L + +    S  Q   +++GIAAG+ YL 
Sbjct: 69  HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLA 127

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG--KISHTTNVVGTIGYIAPEL 520
                  +HRD+ + N+L+++++  ++ DFGL+R+ +        T+     I + APE 
Sbjct: 128 NMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 184

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
               K + ++DV+++G+++ E+ T       +               +V+  ++      
Sbjct: 185 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-----------SNHEVMKAINDGFRLP 233

Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSL 629
             +     + QL + C  Q+   RP    ++  L  D+L+   D+  +L
Sbjct: 234 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL--DKLIRAPDSLKTL 280

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (466), Expect = 3e-53
 Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 24/225 (10%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-----------------PTRMREFAAEIESLGRLRHKHLV 406
           F++   +G G  G V+K                    P    +   E++ L      ++V
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
              G      ++ +  +++  GSLD +L       +  +    +   +  GL YL E+  
Sbjct: 68  GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREK-- 123

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
             ++HRDVK  N+L+++    +L DFG++        S   + VGT  Y++PE  +    
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMANSFVGTRSYMSPERLQGTHY 180

Query: 527 SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD 571
           S  +D+++ G+ L+E+A GR PI       ++ +   Q  G   +
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

 Score =  179 bits (455), Expect = 2e-52
 Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 49/280 (17%)

Query: 25  EEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQML 78
           + F F  FN +      I +  A++   S  LRLT    N       +G AFY+ PIQ+ 
Sbjct: 4   QSFSFKNFNSS----SFILQGDATV--SSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIY 57

Query: 79  DKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
           DKST        +S++T F   I  PN      G+AF + P  S P   +  +LG+ +S 
Sbjct: 58  DKSTG-----AVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNS-GFLGVFDSD 111

Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                S    A+EFDT +  N   D    H+GI+VNS+KSI+              + L 
Sbjct: 112 VY-DNSAQTVAVEFDTFS--NTDWDPTSRHIGIDVNSIKSIRTAS-----------WGLA 157

Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVG 258
           +G   +  I Y+    L+  ++   ++           +  ++S  +D++    E + +G
Sbjct: 158 NGQNAEILITYNAATSLLVASLVHPSR----------RTSYIVSERVDITNELPEYVSIG 207

Query: 259 FSASTGRK---VSSHFILGWSFSMN----GAAPSLNLSQI 291
           FSA+TG       +H +L WSF+           L+++  
Sbjct: 208 FSATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASY 247

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (453), Expect = 5e-52
 Identities = 60/273 (21%), Positives = 107/273 (39%), Gaps = 37/273 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVL------------------PTRMREFAAEIESLGRLRHKHL 405
           ++    IGTG +G   K                         +   +E+  L  L+H ++
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65

Query: 406 VNLQGWC--KRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYL 461
           V        +    L +V +Y   G L S++     E   L  E    ++  +   L   
Sbjct: 66  VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125

Query: 462 HE--EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
           H   +    V+HRD+K  NV +D   N +LGDFGLAR+ +H   S     VGT  Y++PE
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT-SFAKAFVGTPYYMSPE 184

Query: 520 LARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS 579
                  +  +D+++ G LL E+     P  +          + +  G++ +     +  
Sbjct: 185 QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--------QKELAGKIREGKFRRIPY 236

Query: 580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
            Y     E++ +      + K   RP++ ++L 
Sbjct: 237 RYSDELNEIITR----MLNLKDYHRPSVEEILE 265

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

 Score =  176 bits (448), Expect = 9e-52
 Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 48/267 (17%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV-----IGHAFYNKPIQMLDKS 81
           F FN F++ +     +  +R + +  +  L LT   + V      G A Y KP+Q+ D +
Sbjct: 5   FNFNQFHQNEEQ---LKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 61

Query: 82  TSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDH 141
           T      N +SF T F F I  P                P+   G+   Y GI N  +  
Sbjct: 62  TG-----NVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPLS-- 114

Query: 142 KPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGD 201
                  A+EFDT   +  T D Q  H+GI+VNS+ S K              FTL++G 
Sbjct: 115 --PYPFVAVEFDT---FRNTWDPQIPHIGIDVNSVISTK-----------TVPFTLDNGG 158

Query: 202 PVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSA 261
                I YD   ++++V +   +            +   ++  +DL     E++ VGFSA
Sbjct: 159 IANVVIKYDASTKILHVVLVFPSL----------GTIYTIADIVDLKQVLPESVNVGFSA 208

Query: 262 STG-------RKVSSHFILGWSFSMNG 281
           +TG           +H IL WSFS + 
Sbjct: 209 ATGDPSGKQRNATETHDILSWSFSASL 235

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  176 bits (448), Expect = 9e-52
 Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 46/261 (17%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F  FNET      +  +R + +  SG LRLT+   N       +G AFY+ PIQ+ D 
Sbjct: 6   FNFQRFNETN-----LILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDN 60

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTND 140
           +T        +SF+T F F I  PN+     GLAF + P  S P  K   +LG+    + 
Sbjct: 61  TTG-----TVASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKG-GFLGL---FDG 111

Query: 141 HKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESG 200
              + H  A+EFDT+  YN+  D    H+GI+VNS++SIK     +            +G
Sbjct: 112 SNSNFHTVAVEFDTL--YNKDWDPTERHIGIDVNSIRSIKTTRWDFV-----------NG 158

Query: 201 DPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFS 260
           +  +  I YD    L+  ++   ++           +  ++S  +DL     E + VGFS
Sbjct: 159 ENAEVLITYDSSTNLLVASLVYPSQ----------KTSFIVSDTVDLKSVLPEWVSVGFS 208

Query: 261 ASTG---RKVSSHFILGWSFS 278
           A+TG     V ++ +L WSF+
Sbjct: 209 ATTGINKGNVETNDVLSWSFA 229

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

 Score =  176 bits (446), Expect = 2e-51
 Identities = 77/264 (29%), Positives = 111/264 (42%), Gaps = 49/264 (18%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDK 80
           F F+ F E       +  +R + +K +G L LT    N        G A Y +PI++ D 
Sbjct: 5   FNFDHFEENSKE---LNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDS 61

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSG-QGGFGLAFTVSPQPSFPGGKAEHYLGILNSTN 139
           +T      N +SF T F F I  P +  +   GL F + P  S  G       G      
Sbjct: 62  TT-----GNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQG-----EDGGNLGVF 111

Query: 140 DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLES 199
                ++ FA+EFDT   +  T D Q  H+GI+VNS+ S K              F LE+
Sbjct: 112 KPPEGDNAFAVEFDT---FQNTWDPQVPHIGIDVNSIVSSK-----------TLHFQLEN 157

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAF--QETMYV 257
           G      I YD   +++NV +   +            +   LS  +DL   F   E + V
Sbjct: 158 GGVANVVIKYDSPTKILNVVLAFHS----------VGTVYTLSNIVDLKQEFPNSEWVNV 207

Query: 258 GFSASTG---RKVSSHFILGWSFS 278
           G SA+TG     V +H I+ WSF+
Sbjct: 208 GLSATTGYQKNAVETHEIISWSFT 231

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (447), Expect = 4e-51
 Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 40/272 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVL------------------PTRMREFAAEIESLGRLRHKHL 405
            K    IG G F  VYKG+                    +  + F  E E L  L+H ++
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 406 VNLQGWC----KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           V          K K+ ++LV + + +G+L + L   +  V+  +   +  + I  GL +L
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFL 128

Query: 462 HEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           H     + IHRD+K  N+ I     + ++GD GLA L      S    V+GT  ++APE+
Sbjct: 129 HTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAPEM 184

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
               K   S DV+A+G+ +LE+AT   P               Q   +V   V P     
Sbjct: 185 YE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVKPASFDK 236

Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
             + E++ +++    C  Q  + R +++ +L 
Sbjct: 237 VAIPEVKEIIE---GCIRQNKDERYSIKDLLN 265

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score =  174 bits (441), Expect = 9e-51
 Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 35/254 (13%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLT-DNAHNVIGHAFYNKPIQMLDKSTSLS 85
           F FN F+E       I  +    +  +G ++LT  N  N +G   Y  P+++   +T   
Sbjct: 6   FNFNSFSEGNPA---INFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG-- 60

Query: 86  SKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSN 145
              N +SF T F F++          G+ F ++P+ +     +    G     +D K + 
Sbjct: 61  ---NVASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGS--IGGGTLGVSDTKGAG 115

Query: 146 HLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQA 205
           H   +EFDT +  +E +D   +HVGI+VNS+ S+K  P           +   SG  V+ 
Sbjct: 116 HFVGVEFDTYSN-SEYNDPPTDHVGIDVNSVDSVKTVP-----------WNSVSGAVVKV 163

Query: 206 WIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGR 265
            + YD   + ++V +                    ++  +DL     E +  GFSAS   
Sbjct: 164 TVIYDSSTKTLSVAVTND-----------NGDITTIAQVVDLKAKLPERVKFGFSASGSL 212

Query: 266 K-VSSHFILGWSFS 278
                H I  WSF+
Sbjct: 213 GGRQIHLIRSWSFT 226

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  176 bits (447), Expect = 1e-50
 Identities = 68/310 (21%), Positives = 114/310 (36%), Gaps = 49/310 (15%)

Query: 361 TKGFKQSEVIGTGGFGEVYKGVL-------------------PTRMREFAAEIESLGRLR 401
            K F     IG G FG VY                         + ++   E+  L +LR
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H + +  +G   R+    LV +Y    + D L    +   L   +   +  G   GL YL
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAVTHGALQGLAYL 131

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H      +IHRDVK+GN+L+      +LGDFG A +          + VGT  ++APE+ 
Sbjct: 132 HSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANSFVGTPYWMAPEVI 183

Query: 522 RT---GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
                G+     DV++ G+  +E+A  + P+ + +            L  +     P L 
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNESPALQ 235

Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL------RYLNGDELLPIIDNWSSLDSQ 632
           S +              C  +  + RPT   +L      R      ++ +I        +
Sbjct: 236 SGHWSEYFR---NFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRE 292

Query: 633 RSEMNSRYLE 642
              +  R ++
Sbjct: 293 LDNLQYRKMK 302

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  172 bits (437), Expect = 2e-50
 Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 47/260 (18%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV---IGHAFYNKPIQMLDKSTS 83
           F    FN+T      +  +  + +   G L LT+   N    +G AFY+ PIQ+ D++  
Sbjct: 6   FNVETFNKTN-----LILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID 60

Query: 84  LSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKP 143
                N +SFST F F+I   N     +GLAF + P  S P  K   YLG+ N+TN    
Sbjct: 61  -----NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPKLKG-RYLGLFNTTN---- 110

Query: 144 SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPV 203
                  + D         D+  N + I+VNS++ I  E   +            +G+  
Sbjct: 111 ------YDRDAHTVAVVF-DTVSNRIEIDVNSIRPIATESCNFG---------HNNGEKA 154

Query: 204 QAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAST 263
           +  I YD     + V++   +             +  +S  + L    ++ + VGFSA++
Sbjct: 155 EVRITYDSPKNDLRVSLLYPSS----------EEKCHVSATVPLEKEVEDWVSVGFSATS 204

Query: 264 G---RKVSSHFILGWSFSMN 280
           G       +H +L WSFS N
Sbjct: 205 GSKKETTETHNVLSWSFSSN 224

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

 Score =  172 bits (437), Expect = 4e-50
 Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 35/258 (13%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN----VIGHAFYNKPIQMLDKST 82
           F F  F++   +  L  +  AS++  +G L+L    +N      G A Y  PI + + +T
Sbjct: 6   FKFKNFSQNGKD--LSFQGNASVI-ETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNT 62

Query: 83  SLSSKPNASSFSTCFVFQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDH 141
                   +SF T F F + T  N      GL F ++P P  P  +A  Y G+ N T   
Sbjct: 63  G-----ELASFITSFSFFMETSANPKAATDGLTFFLAP-PDSPLRRAGGYFGLFNDTKC- 115

Query: 142 KPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGD 201
             S    A+EFDT+       D    H+GI+VN +KSI  E           +      +
Sbjct: 116 DSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERW---------NKRYGLNN 166

Query: 202 PVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSA 261
                I Y+  ++ +  ++                +   ++  +DL     E + VGFS 
Sbjct: 167 VANVEIIYEASSKTLTASLTYP----------SDQTSISVTSIVDLKEILPEWVSVGFSG 216

Query: 262 STGRKV-SSHFILGWSFS 278
           ST     ++H +L W F+
Sbjct: 217 STYIGRQATHEVLNWYFT 234

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

 Score =  172 bits (436), Expect = 6e-50
 Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 39/260 (15%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLDK 80
           F F  F   + N  LI +  A I   + A++LT    N       +G   ++  + + +K
Sbjct: 6   FGFPTFPSDQKN--LIFQGDAQI--KNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEK 61

Query: 81  STSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILN-STN 139
           S+S       ++F + F F + +P S        F   P  + P G     LG+    T 
Sbjct: 62  SSS-----RVANFQSQFSFSLKSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTA 116

Query: 140 DHKPSNHLFAIEFDTV-NGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
            +  +N + A+EFDT     + T D    H+GI+VNS++S+K              +   
Sbjct: 117 QNTSANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVK-----------WDRR 165

Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVG 258
            G  +   + ++   R ++V              +   ++  +S  +D+     E + VG
Sbjct: 166 DGQSLNVLVTFNPSTRNLDVVA-----------TYSDGTRYEVSYEVDVRSVLPEWVRVG 214

Query: 259 FSASTGRKVSSHFILGWSFS 278
           FSA++G +  +H +  WSF+
Sbjct: 215 FSAASGEQYQTHTLESWSFT 234

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

 Score =  171 bits (435), Expect = 7e-50
 Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 44/262 (16%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV-----IGHAFYNKPIQMLDKS 81
           F F  FN  + N   +  +  +++  +G L LT  A        +G A Y  PI + D +
Sbjct: 6   FSFTNFNPNQNN---LILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNT 62

Query: 82  TSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDH 141
                    +SF+T F F +  P +     GLAF ++P  + P  +   +LG+      H
Sbjct: 63  -------TLASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARG-GFLGLFADRA-H 113

Query: 142 KPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGD 201
             S    A+EFDT   Y+   D    H+GI+ N ++S K  P           F +  G+
Sbjct: 114 DASYQTVAVEFDT---YSNAWDPNYTHIGIDTNGIESKKTTP-----------FDMVYGE 159

Query: 202 PVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSA 261
                I Y    + +  ++                +   +S  +DL     E + VGFSA
Sbjct: 160 KANIVITYQASTKALAASLVFPVS----------QTSYAVSARVDLRDILPEYVRVGFSA 209

Query: 262 STGRK---VSSHFILGWSFSMN 280
           +TG     V +H I+ WSF+++
Sbjct: 210 TTGLNAGVVETHDIVSWSFAVS 231

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (440), Expect = 9e-50
 Identities = 74/323 (22%), Positives = 129/323 (39%), Gaps = 61/323 (18%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-------------------PTRMREFAAEIESLGRL-RHK 403
            K  +VIG G FG+V K  +                       R+FA E+E L +L  H 
Sbjct: 12  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF--------------VLSWEQRFN 449
           +++NL G C+ +  L L  +Y P+G+L   L  +                  LS +Q  +
Sbjct: 72  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNV 509
               +A G+ YL    ++  IHRD+ + N+L+  +  A++ DFGL+R  +       T  
Sbjct: 132 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMG 186

Query: 510 VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV 569
              + ++A E       + ++DV++YGVLL EI +                       ++
Sbjct: 187 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-----------MTCAEL 235

Query: 570 LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGDELLPIIDNWSSL 629
            + +         +   + V  L   C  +K   RP+  Q+L  LN             L
Sbjct: 236 YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN-----------RML 284

Query: 630 DSQRSEMNSRYLEIISTDNITTS 652
           + +++ +N+   E  +   I  S
Sbjct: 285 EERKTYVNTTLYEKFTYAGIDCS 307

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (435), Expect = 3e-49
 Identities = 62/280 (22%), Positives = 118/280 (42%), Gaps = 42/280 (15%)

Query: 368 EVIGTGGFGEVYKGVL----------------PTRMREFAAEIESLGRLRHKHLVNLQGW 411
             +G G FG+VYK                      + ++  EI+ L    H ++V L   
Sbjct: 18  GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH 471
              + +L ++ ++   G++D+++ + E   L+  Q   + K     L YLH+     +IH
Sbjct: 78  FYYENNLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDNK---IIH 133

Query: 472 RDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA----- 526
           RD+K+GN+L   D + +L DFG++       I    + +GT  ++APE+     +     
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDSFIGTPYWMAPEVVMCETSKDRPY 192

Query: 527 SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE- 585
               DV++ G+ L+E+A    P    +          + L ++     P L      +  
Sbjct: 193 DYKADVWSLGITLIEMAEIEPPHHELN--------PMRVLLKIAKSEPPTLAQPSRWSSN 244

Query: 586 -MELVLQLGLLCSHQKAEARPTMRQVLR--YLNGDELLPI 622
             + + +    C  +  +AR T  Q+L+  ++  D   PI
Sbjct: 245 FKDFLKK----CLEKNVDARWTTSQLLQHPFVTVDSNKPI 280

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

 Score =  169 bits (429), Expect = 4e-49
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 41/263 (15%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV-----IGHAFYNKPIQMLDKS 81
           F F  F   +     +  +  +++  +G L+LT+  + V     +G A Y  P Q+ D +
Sbjct: 6   FSFPKFAPNQPY---LINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDST 62

Query: 82  TSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDH 141
           T      N +SF T F F I  PN      GLAF ++P  + P       LGI      +
Sbjct: 63  T-----GNVASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQPLDLGG-MLGIFKDGYFN 116

Query: 142 KPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGD 201
             SN + A+EFDT    N   D +G H+GINVNS++SIK  P  +            +G+
Sbjct: 117 -KSNQIVAVEFDTF--SNGDWDPKGRHLGINVNSIESIKTVPWNWT-----------NGE 162

Query: 202 PVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSA 261
               +I Y+   + +  ++   +            +  ++   +D+     E +  GFSA
Sbjct: 163 VANVFISYEASTKSLTASLVYPSL----------ETSFIIDAIVDVKIVLPEWVRFGFSA 212

Query: 262 STG---RKVSSHFILGWSFSMNG 281
           +TG     V ++ +L WSF  N 
Sbjct: 213 TTGIDKGYVQTNDVLSWSFESNL 235

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (436), Expect = 4e-49
 Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 43/275 (15%)

Query: 367 SEVIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHLV 406
           +EVIG G FG VY G L                       + +F  E   +    H +++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 407 NLQGWC-KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           +L G C + +   L+V  Y+ +G L +    NE    + +        +A G+       
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNF-IRNETHNPTVKDLIGFGLQVAKGM---KFLA 147

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK---ISHTTNVVGTIGYIAPELAR 522
            +  +HRD+ + N ++D     ++ DFGLAR     +   + + T     + ++A E  +
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 207

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPI--DSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
           T K +  +DV+++GVLL E+ T   P   D + F +  ++L+ + L Q     DP     
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 262

Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                   + ++ L C H KAE RP+  +++  ++
Sbjct: 263 --------LYEVMLKCWHPKAEMRPSFSELVSRIS 289

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (436), Expect = 5e-49
 Identities = 59/330 (17%), Positives = 109/330 (33%), Gaps = 71/330 (21%)

Query: 331 LYRRIAQFEILEDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL------- 383
            Y    ++E    WE        +             +V+G+G FG+V            
Sbjct: 19  FYVDFREYEYDLKWEFP-RENLEFG------------KVLGSGAFGKVMNATAYGISKTG 65

Query: 384 ---------------PTRMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPN 427
                           +      +E++ + +L  H+++VNL G C     + L+++Y   
Sbjct: 66  VSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 125

Query: 428 GSLDSLLFDNENF---------------------VLSWEQRFNIIKGIAAGLLYLHEEWE 466
           G L + L                           VL++E        +A G+ +L     
Sbjct: 126 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--- 182

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT-TNVVGTIGYIAPELARTGK 525
           +  +HRD+ + NVL+      ++ DFGLAR            N    + ++APE    G 
Sbjct: 183 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 242

Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
            +  +DV++YG+LL EI +                           ++            
Sbjct: 243 YTIKSDVWSYGILLWEIFSLGVNPYPG----------IPVDANFYKLIQNGFKMDQPFYA 292

Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
            E +  +   C    +  RP+   +  +L 
Sbjct: 293 TEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  170 bits (432), Expect = 1e-48
 Identities = 61/296 (20%), Positives = 107/296 (36%), Gaps = 59/296 (19%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRM----------------------REFAAEIESLGRLR 401
            +    IG G FG V++   P  +                       +F  E   +    
Sbjct: 15  IEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD 74

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF--------------------- 440
           + ++V L G C   + + L+++Y+  G L+  L                           
Sbjct: 75  NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 134

Query: 441 -VLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD 499
             LS  ++  I + +AAG+ YL E      +HRD+ + N L+  +M  ++ DFGL+R   
Sbjct: 135 PPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIY 191

Query: 500 HGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVD 558
                    N    I ++ PE     + +  +DV+AYGV+L EI +             +
Sbjct: 192 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA--HE 249

Query: 559 WVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
            V+ +   G +L   +              +  L  LC  +    RP+   + R L
Sbjct: 250 EVIYYVRDGNILACPE---------NCPLELYNLMRLCWSKLPADRPSFCSIHRIL 296

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (430), Expect = 1e-48
 Identities = 62/283 (21%), Positives = 111/283 (39%), Gaps = 40/283 (14%)

Query: 356 DLYTATKGFKQSEV-IGTGGFGEVYKGVLPTR-------------------MREFAAEIE 395
            L+        +++ +G G FG V +GV   R                     E   E +
Sbjct: 2   KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 61

Query: 396 SLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIA 455
            + +L + ++V L G C+ +  L+LV +    G L   L       +       ++  ++
Sbjct: 62  IMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVS 119

Query: 456 AGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTI 513
            G+ YL E+     +HRD+ + NVL+     A++ DFGL++    D    +  +     +
Sbjct: 120 MGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 176

Query: 514 GYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDV 572
            + APE     K S  +DV++YGV + E  + G++P           V+ F   G+ ++ 
Sbjct: 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG---PEVMAFIEQGKRMEC 233

Query: 573 VDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                       E+     L   C   K E RP    V + + 
Sbjct: 234 PP------ECPPELY---ALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (431), Expect = 2e-48
 Identities = 55/316 (17%), Positives = 105/316 (33%), Gaps = 66/316 (20%)

Query: 342 EDWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVL------------------ 383
             WE    +R  +             + +G G FG+V +                     
Sbjct: 16  HKWEFP-RNRLSFG------------KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62

Query: 384 ----PTRMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLL---- 434
                T      +E++ L  L  H ++VNL G C      L++ +Y   G L + L    
Sbjct: 63  PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122

Query: 435 ------------FDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID 482
                        +++   L  E   +    +A G+ +L  +     IHRD+ + N+L+ 
Sbjct: 123 DSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLT 179

Query: 483 ADMNARLGDFGLARLFDHGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLE 541
                ++ DFGLAR   +        N    + ++APE       +  +DV++YG+ L E
Sbjct: 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 239

Query: 542 IATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKA 601
           + +                       +   ++               +  +   C     
Sbjct: 240 LFSLGSSPYPGM----------PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADP 289

Query: 602 EARPTMRQVLRYLNGD 617
             RPT +Q+++ +   
Sbjct: 290 LKRPTFKQIVQLIEKQ 305

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (428), Expect = 2e-48
 Identities = 60/270 (22%), Positives = 105/270 (38%), Gaps = 41/270 (15%)

Query: 369 VIGTGGFGEVYKGVL--------------------PTRMREFAAEIESLGRLRHKHLVNL 408
            +G+G FG V KG                      P    E  AE   + +L + ++V +
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
            G C+ +   +LV +    G L+  L  N +  +  +    ++  ++ G+ YL E     
Sbjct: 74  IGICEAE-SWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESN--- 127

Query: 469 VIHRDVKSGNVLIDADMNARLGDFGLARLF--DHGKISHTTNVVGTIGYIAPELARTGKA 526
            +HRD+ + NVL+     A++ DFGL++    D       T+    + + APE     K 
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187

Query: 527 SCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
           S  +DV+++GVL+ E  + G++P                   +V  +++           
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------------EVTAMLEKGERMGCPAGC 235

Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
              +  L  LC     E RP    V   L 
Sbjct: 236 PREMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (426), Expect = 3e-48
 Identities = 59/268 (22%), Positives = 100/268 (37%), Gaps = 34/268 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA-----------------AEIESLGRLRHKHLV 406
           +   + +G G +GEV   V        A                  EI     L H+++V
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
              G  +      L  +Y   G L   +  +                + AG++YLH    
Sbjct: 67  KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIG- 123

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN-VVGTIGYIAPELARTGK 525
             + HRD+K  N+L+D   N ++ DFGLA +F +       N + GT+ Y+APEL +  +
Sbjct: 124 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181

Query: 526 -ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA 584
             +   DV++ G++L  +  G  P D       D   E+    +    ++P         
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPS----DSCQEYSDWKEKKTYLNPWKKID---- 233

Query: 585 EMELVLQLGLLCSHQKAEARPTMRQVLR 612
                L L      +   AR T+  + +
Sbjct: 234 --SAPLALLHKILVENPSARITIPDIKK 259

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

 Score =  166 bits (422), Expect = 6e-48
 Identities = 62/262 (23%), Positives = 104/262 (39%), Gaps = 41/262 (15%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNV-----IGHAFYNKPIQMLDKS 81
           F  N F   + +   +  +  + +  +G L+LT   +       +G A Y  P+++   +
Sbjct: 6   FTINNFVPNEAD---LLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNT 62

Query: 82  TSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDH 141
           T      + +SFST F F +  PN      GLAF ++P  S     +      L + ++ 
Sbjct: 63  T-----GSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNS 117

Query: 142 KPSNHLFAIEFDT-VNGYNETSDSQGNHVGINVNSMKSIKLEPAAYY--ENGTKEDFTLE 198
             SN + A+EFDT      +  D    H+GI+VN ++SIK     +            L 
Sbjct: 118 DSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFATITYLA 177

Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVG 258
               + A + Y                           +   ++  +DL     E + VG
Sbjct: 178 PNKTLIASLVYP-----------------------SNQTTFSVAASVDLKEILPEWVRVG 214

Query: 259 FSASTGRK--VSSHFILGWSFS 278
           FSA+TG    V +H +L WSF+
Sbjct: 215 FSAATGYPTEVETHDVLSWSFT 236

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 2e-47
 Identities = 58/268 (21%), Positives = 102/268 (38%), Gaps = 40/268 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-------------------PTRMREFAAEIESLGRLRHKH 404
           F+    +G G FG VY                            +   E+E    LRH +
Sbjct: 8   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 67

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           ++ L G+      + L+ +Y P G++   L     F    ++    I  +A  L Y H  
Sbjct: 68  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELANALSYCHS- 124

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
             + VIHRD+K  N+L+ +    ++ DFG +        S  T + GT+ Y+ PE+    
Sbjct: 125 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---SRRTTLCGTLDYLPPEMIEGR 179

Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA 584
                 D+++ GVL  E   G+ P +++          +Q   + +  V+          
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGKPPFEANT---------YQETYKRISRVEFTFPDFVTEG 230

Query: 585 EMELVLQLGLLCSHQKAEARPTMRQVLR 612
             +L+ +            RP +R+VL 
Sbjct: 231 ARDLISR----LLKHNPSQRPMLREVLE 254

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

 Score =  164 bits (416), Expect = 3e-47
 Identities = 60/260 (23%), Positives = 96/260 (36%), Gaps = 38/260 (14%)

Query: 27  FIFNGFNETKTNQG--LITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQML 78
           F +  F       G  +     A+     GAL+LT    N        G A Y++P+ + 
Sbjct: 6   FTYPDFWSYSLKNGTEITFLGDATR--IPGALQLTKTDANGNPVRSSAGQASYSEPVFLW 63

Query: 79  DKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNST 138
           D +        A+SF T F F ++         GLAF ++P  S             + T
Sbjct: 64  DSTG------KAASFYTSFTF-LLKNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHET 116

Query: 139 NDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLE 198
                 N + A+EFDT     + +D    H+GI+VNS+ S+                   
Sbjct: 117 AADPSKNQVVAVEFDTWI-NKDWNDPPYPHIGIDVNSIVSVATTRWEN--------DDAY 167

Query: 199 SGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVG 258
                 A I YD  ++++ V +            +      +LS  +DL+    + + +G
Sbjct: 168 GSSIATAHITYDARSKILTVLL-----------SYEHGRDYILSHVVDLAKVLPQKVRIG 216

Query: 259 FSASTGRKVSSHFILGWSFS 278
           FSA  G      +IL W F 
Sbjct: 217 FSAGVGY-DEVTYILSWHFF 235

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 1e-46
 Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 38/274 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVL---------------------PTRMREFAAEIESLGRLRH 402
           FK+ +V+G+G FG VYKG+                      P   +E   E   +  + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
            H+  L G C     + L+   +P G L   + ++++ +   +   N    IA G+ YL 
Sbjct: 71  PHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNI-GSQYLLNWCVQIAKGMNYLE 128

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG-KISHTTNVVGTIGYIAPELA 521
           +     ++HRD+ + NVL+    + ++ DFGLA+L     K  H       I ++A E  
Sbjct: 129 DRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185

Query: 522 RTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY 581
                +  +DV++YGV + E+ T                       ++  +++       
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-----------PASEISSILEKGERLPQ 234

Query: 582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
                  V  + + C    A++RP  R+++   +
Sbjct: 235 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (416), Expect = 2e-46
 Identities = 64/306 (20%), Positives = 118/306 (38%), Gaps = 51/306 (16%)

Query: 349 PHRFRYSDLYTATK------GFKQSEVIGTGGFGEVYKGVLPTRMR-------------- 388
           P  F  +D+Y   +          S  +G G FG VY+GV    ++              
Sbjct: 1   PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 60

Query: 389 --------EFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENF 440
                   EF  E   +      H+V L G   + +  L++ + +  G L S L      
Sbjct: 61  AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPA 120

Query: 441 V--------LSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDF 492
           +         S  +   +   IA G+ YL+       +HRD+ + N ++  D   ++GDF
Sbjct: 121 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDF 177

Query: 493 GLARLFDHGKISH-TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDS 551
           G+ R              +  + +++PE  + G  +  +DV+++GV+L EIAT       
Sbjct: 178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 237

Query: 552 DHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVL 611
                 + VL F   G +LD  D            +++ +L  +C     + RP+  +++
Sbjct: 238 GLS--NEQVLRFVMEGGLLDKPDN---------CPDMLFELMRMCWQYNPKMRPSFLEII 286

Query: 612 RYLNGD 617
             +  +
Sbjct: 287 SSIKEE 292

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (412), Expect = 7e-46
 Identities = 57/268 (21%), Positives = 107/268 (39%), Gaps = 33/268 (12%)

Query: 361 TKGFKQSEVIGTGGFGEVYKGVLPTRMREFA----------------AEIESLGRLRHKH 404
            K + + E IG G  G VY  +     +E A                 EI  +   ++ +
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           +VN         +L +V +Y+  GSL  ++ +         Q   + +     L +LH  
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM---DEGQIAAVCRECLQALEFLHSN 135

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               VIHRD+KS N+L+  D + +L DFG        + S  + +VGT  ++APE+    
Sbjct: 136 Q---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRK 191

Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA 584
                 D+++ G++ +E+  G  P  +++ +     L         ++ +P   S     
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPL---RALYLIATNGTPELQNPEKLS----- 243

Query: 585 EMELVLQLGLLCSHQKAEARPTMRQVLR 612
              +       C     E R + +++L+
Sbjct: 244 --AIFRDFLNRCLDMDVEKRGSAKELLQ 269

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (407), Expect = 1e-45
 Identities = 58/279 (20%), Positives = 104/279 (37%), Gaps = 43/279 (15%)

Query: 362 KGFKQSEVIGTGGFGEVYKGVL----------------------PTRMREFAAEIESLGR 399
           K  +  E +G G FG V +G                        P  M +F  E+ ++  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
           L H++L+ L G       + +V +  P GSL   L  ++               +A G+ 
Sbjct: 68  LDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMG 125

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH--TTNVVGTIGYIA 517
           YL  +     IHRD+ + N+L+      ++GDFGL R        +    +      + A
Sbjct: 126 YLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRP--IDSDHFILVDWVLEFQHLGQVLDVVDP 575
           PE  +T   S ++D + +GV L E+ T  +   I  +   ++  + +        +    
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ 242

Query: 576 NLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL 614
           ++              + + C   K E RPT   +  +L
Sbjct: 243 DI------------YNVMVQCWAHKPEDRPTFVALRDFL 269

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (406), Expect = 2e-45
 Identities = 55/294 (18%), Positives = 107/294 (36%), Gaps = 51/294 (17%)

Query: 343 DWELDCPHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTR---------------- 386
           D+E+    R                  IG G FG+V++G+  +                 
Sbjct: 1   DYEIQ-RERIELG------------RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT 47

Query: 387 ----MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVL 442
                 +F  E  ++ +  H H+V L G    +  + ++ +    G L S       + L
Sbjct: 48  SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSF-LQVRKYSL 105

Query: 443 SWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK 502
                      ++  L YL     +  +HRD+ + NVL+ ++   +LGDFGL+R  +   
Sbjct: 106 DLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162

Query: 503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVL 561
               +     I ++APE     + + ++DV+ +GV + EI   G +P             
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-------- 214

Query: 562 EFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
               +G++ +     +  +       L+ +    C       RP   ++   L+
Sbjct: 215 NNDVIGRIENGERLPMPPNCPPTLYSLMTK----CWAYDPSRRPRFTELKAQLS 264

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  161 bits (408), Expect = 1e-44
 Identities = 65/312 (20%), Positives = 125/312 (40%), Gaps = 38/312 (12%)

Query: 368 EVIGTGGFGEVYKGV----------------LPTRMREFAAEIESLGRLRHKHLVNLQGW 411
           E +G+G FG V++ V                 P        EI  + +L H  L+NL   
Sbjct: 35  EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 94

Query: 412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIH 471
            + K +++L+ +++  G L   +   E++ +S  +  N ++    GL ++HE     ++H
Sbjct: 95  FEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVH 150

Query: 472 RDVKSGNVLIDADMNAR--LGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCS 529
            D+K  N++ +    +   + DFGLA   +  +I   T    T  + APE+         
Sbjct: 151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT--TATAEFAAPEIVDREPVGFY 208

Query: 530 TDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELV 589
           TD++A GVL   + +G  P   +  +        Q++ +     D +  SS      + +
Sbjct: 209 TDMWAIGVLGYVLLSGLSPFAGEDDLET-----LQNVKRCDWEFDEDAFSSVSPEAKDFI 263

Query: 590 LQLGLLCSHQKAEARPTMRQVLR--YLNGD--ELLPIIDNWSSLDSQRSEMNSRYLEIIS 645
                    ++   R T+   L   +L GD   L   I + S  +  R ++  +Y +  +
Sbjct: 264 KN----LLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPS-SRYNKIRQKIKEKYADWPA 318

Query: 646 TDNITTSQLSSS 657
                    + S
Sbjct: 319 PQPAIGRIANFS 330

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  158 bits (400), Expect = 1e-43
 Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 33/267 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA----------------EIESLGRLRHKHLVN 407
           +   E +GTG FG V++         FAA                EI+++  LRH  LVN
Sbjct: 28  YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 87

Query: 408 LQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
           L    +   +++++Y+++  G L   + D  N  +S ++    ++ +  GL ++HE    
Sbjct: 88  LHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHENN-- 144

Query: 468 VVIHRDVKSGNVLIDADMNAR--LGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
             +H D+K  N++     +    L DFGL    D  +    T   GT  + APE+A    
Sbjct: 145 -YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKP 201

Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE 585
               TD+++ GVL   + +G  P   ++          +++      +D +  S      
Sbjct: 202 VGYYTDMWSVGVLSYILLSGLSPFGGENDDET-----LRNVKSCDWNMDDSAFSGISEDG 256

Query: 586 MELVLQLGLLCSHQKAEARPTMRQVLR 612
            + + +            R T+ Q L 
Sbjct: 257 KDFIRK----LLLADPNTRMTIHQALE 279

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (385), Expect = 3e-42
 Identities = 63/285 (22%), Positives = 110/285 (38%), Gaps = 45/285 (15%)

Query: 349 PHRFRYSDLYTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFA----------------- 391
           P + R  D       FK  +++G G F  V         RE+A                 
Sbjct: 2   PRKKRPED-------FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY 54

Query: 392 --AEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFN 449
              E + + RL H   V L    +    L     Y  NG L   +    +F         
Sbjct: 55  VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF--DETCTRF 112

Query: 450 IIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH-GKISHTTN 508
               I + L YLH +    +IHRD+K  N+L++ DM+ ++ DFG A++     K +   +
Sbjct: 113 YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 169

Query: 509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQ 568
            VGT  Y++PEL     A  S+D++A G ++ ++  G  P  + +        E+    +
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EYLIFQK 221

Query: 569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY 613
           ++  ++ +    +     +LV +         A  R    ++  Y
Sbjct: 222 IIK-LEYDFPEKFFPKARDLVEK----LLVLDATKRLGCEEMEGY 261

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

 Score =  149 bits (376), Expect = 1e-41
 Identities = 73/262 (27%), Positives = 107/262 (40%), Gaps = 51/262 (19%)

Query: 26  EFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHN------VIGHAFYNKPIQMLD 79
            F F  F+   T+  LI +  A+I    G L+LT    N       +G AFY+ PIQ+ D
Sbjct: 5   SFNFPNFH---TDDKLILQGNATIS-SKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD 60

Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTN 139
            +       N +SF+T F F I   N     +GLAF + P  S P  K E +LGI N+ N
Sbjct: 61  SN-------NVASFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQKKQE-FLGIFNTNN 112

Query: 140 DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLES 199
             +P+    A+ F+T            N +  + N +K    E           DF   +
Sbjct: 113 P-EPNARTVAVVFNTF----------KNRIDFDKNFIKPYVNENC---------DFHKYN 152

Query: 200 GDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF 259
           G+     I YD  N  + V +                 +  +S  + L     E + VGF
Sbjct: 153 GEKTDVQITYDSSNNDLRVFLHFTVS----------QVKCSVSATVHLEKEVDEWVSVGF 202

Query: 260 SASTG---RKVSSHFILGWSFS 278
           S ++G       +H +L WSFS
Sbjct: 203 SPTSGLTEDTTETHDVLSWSFS 224

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 2e-41
 Identities = 65/292 (22%), Positives = 111/292 (38%), Gaps = 54/292 (18%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTR------------------------MREFAAEIESLGR 399
               + +G G FG+V                                + +  +E+E +  
Sbjct: 15  LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 74

Query: 400 L-RHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFD--------------NENFVLSW 444
           + +HK+++NL G C +   L ++ +Y   G+L   L                N    LS 
Sbjct: 75  IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 134

Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS 504
           +   +    +A G+ YL  +     IHRD+ + NVL+  D   ++ DFGLAR   H    
Sbjct: 135 KDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191

Query: 505 HTTNV-VGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEF 563
             T      + ++APE       +  +DV+++GVLL EI T            V+ + + 
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKL 249

Query: 564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
              G  +D        S    E+     +   C H     RPT +Q++  L+
Sbjct: 250 LKEGHRMDK------PSNCTNEL---YMMMRDCWHAVPSQRPTFKQLVEDLD 292

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  144 bits (364), Expect = 2e-40
 Identities = 54/255 (21%), Positives = 94/255 (36%), Gaps = 62/255 (24%)

Query: 27  FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSS 86
           FI + FN+T      +  +  + +  +G L+L+ N+++ +  AFY+ PIQ+ D +T    
Sbjct: 6   FIIDAFNKTN-----LILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTT---- 56

Query: 87  KPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNH 146
             N +SF T F   I T        GL F + P                           
Sbjct: 57  -GNVASFDTNFTMNIRTHRQANSAVGLDFVLVPVQPESK-------------------GD 96

Query: 147 LFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAW 206
              +EFDT            + + I+VN+                  D     G   +  
Sbjct: 97  TVTVEFDTF----------LSRISIDVNNNDI----------KSVPWDVHDYDGQNAEVR 136

Query: 207 IDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGR- 265
           I Y+   ++ +V++           +        +S  ++L     + + VGFSA++G  
Sbjct: 137 ITYNSSTKVFSVSL----------SNPSTGKSNNVSTTVELEKEVYDWVSVGFSATSGAY 186

Query: 266 --KVSSHFILGWSFS 278
                +H +L WSFS
Sbjct: 187 QWSYETHDVLSWSFS 201

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  147 bits (373), Expect = 2e-40
 Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 38/280 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGRLRHKHLV 406
           +   +V+GTG F EV                     L  +      EI  L +++H ++V
Sbjct: 11  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 70

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L    +    L L+   +  G L   + +   +  +      +I  +   + YLH+   
Sbjct: 71  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDAVKYLHDLG- 127

Query: 467 QVVIHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
             ++HRD+K  N+L    D D    + DFGL+++ D G +  T    GT GY+APE+   
Sbjct: 128 --IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST--ACGTPGYVAPEVLAQ 183

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV 583
              S + D ++ GV+   +  G  P   ++    D  L  Q L    +   P        
Sbjct: 184 KPYSKAVDCWSIGVIAYILLCGYPPFYDEN----DAKLFEQILKAEYEFDSPYW-DDISD 238

Query: 584 AEMELVLQLGLLCSHQKAEARPTMRQVLR--YLNGDELLP 621
           +  + +         +  E R T  Q L+  ++ GD  L 
Sbjct: 239 SAKDFIRH----LMEKDPEKRFTCEQALQHPWIAGDTALD 274

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (372), Expect = 2e-40
 Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 52/291 (17%)

Query: 364 FKQSEVIGTGGFGEVYKGVL----------------------PTRMREFAAEIESLGR-L 400
            K  + +G G FG+V +                          +  R   +E++ L    
Sbjct: 15  LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 74

Query: 401 RHKHLVNLQGWCKRKRD-LLLVYDYIPNGSLDSLLFDNENF--------------VLSWE 445
            H ++VNL G C +    L+++ ++   G+L + L    N                L+ E
Sbjct: 75  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 134

Query: 446 QRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR-LFDHGKIS 504
                   +A G+ +L        IHRD+ + N+L+      ++ DFGLAR ++      
Sbjct: 135 HLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 191

Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ 564
              +    + ++APE       +  +DV+++GVLL EI +          I  +      
Sbjct: 192 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRL 250

Query: 565 HLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
             G  +   D      Y   EM    Q  L C H +   RPT  +++ +L 
Sbjct: 251 KEGTRMRAPD------YTTPEM---YQTMLDCWHGEPSQRPTFSELVEHLG 292

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 1e-39
 Identities = 46/262 (17%), Positives = 107/262 (40%), Gaps = 32/262 (12%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFAA---------------EIESLGRLRHKHLVNLQGWC 412
           E +G G FG V++ V  +  + + A               EI  L   RH+++++L    
Sbjct: 11  EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70

Query: 413 KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHR 472
           +   +L++++++I    +   + +   F L+  +  + +  +   L +LH      + H 
Sbjct: 71  ESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHF 126

Query: 473 DVKSGNVLIDADMNAR--LGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCST 530
           D++  N++     ++   + +FG AR    G             Y APE+ +    S +T
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF--TAPEYYAPEVHQHDVVSTAT 184

Query: 531 DVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVL 590
           D+++ G L+  + +G  P  ++    +      +++       D        +  M+ V 
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQI-----IENIMNAEYTFDEEAFKEISIEAMDFVD 239

Query: 591 QLGLLCSHQKAEARPTMRQVLR 612
           +       ++ ++R T  + L+
Sbjct: 240 R----LLVKERKSRMTASEALQ 257

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  144 bits (365), Expect = 1e-39
 Identities = 58/281 (20%), Positives = 107/281 (38%), Gaps = 48/281 (17%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA-------------------------AEIESLG 398
           ++  E++G G    V + +     +E+A                          E++ L 
Sbjct: 5   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64

Query: 399 RLR-HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAG 457
           ++  H +++ L+   +      LV+D +  G L   L   E   LS ++   I++ +   
Sbjct: 65  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEV 122

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
           +  LH+     ++HRD+K  N+L+D DMN +L DFG +   D G       V GT  Y+A
Sbjct: 123 ICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLREVCGTPSYLA 177

Query: 518 PELARTGKA------SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD 571
           PE+                D+++ GV++  +  G  P             +   L  ++ 
Sbjct: 178 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--------QMLMLRMIMS 229

Query: 572 VVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
             +   GS       + V  L       + + R T  + L 
Sbjct: 230 -GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  143 bits (361), Expect = 5e-39
 Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 44/283 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-------------------PTRMREFAAEIESLGRLRHKH 404
           ++  E++G GG  EV+                       P+    F  E ++   L H  
Sbjct: 9   YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 68

Query: 405 LVNLQGWC----KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           +V +               +V +Y+   +L  ++       ++ ++   +I      L +
Sbjct: 69  IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNF 126

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK--ISHTTNVVGTIGYIAP 518
                +  +IHRDVK  N++I A    ++ DFG+AR        ++ T  V+GT  Y++P
Sbjct: 127 S---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 183

Query: 519 ELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG 578
           E AR       +DV++ G +L E+ TG  P   D        + +QH+ +  D + P+  
Sbjct: 184 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS----PVSVAYQHVRE--DPIPPSAR 237

Query: 579 SSYVVAEMELVLQLGLLCSHQKAEARP-TMRQVL----RYLNG 616
              + A+++ V+   L    +  E R  T  ++     R  NG
Sbjct: 238 HEGLSADLDAVVLKAL---AKNPENRYQTAAEMRADLVRVHNG 277

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (364), Expect = 7e-39
 Identities = 64/314 (20%), Positives = 126/314 (40%), Gaps = 36/314 (11%)

Query: 367 SEVIGTGGFGEVYKGVLPTRMREFAA-----------EIESLGRL-RHKHLVNLQGWCK- 413
           S+V+G G  G+V +        +FA            E+E   R  +  H+V +    + 
Sbjct: 17  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYEN 76

Query: 414 ---RKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVI 470
               ++ LL+V + +  G L S + D  +   +  +   I+K I   + YLH      + 
Sbjct: 77  LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 133

Query: 471 HRDVKSGNVLIDADMN---ARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKAS 527
           HRDVK  N+L  +       +L DFG A+         T     T  Y+APE+    K  
Sbjct: 134 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYD 191

Query: 528 CSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME 587
            S D+++ GV++  +  G  P  S+H + +   ++ +      +   PN   S V  E++
Sbjct: 192 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF--PNPEWSEVSEEVK 249

Query: 588 LVLQLGLLCSHQKAEARPTMRQVLR--YLNGDELLPIIDNWSS-----LDSQRSEMNSRY 640
           ++++        +   R T+ + +   ++     +P     +S        +  ++    
Sbjct: 250 MLIR---NLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEM 306

Query: 641 LEIISTDNITTSQL 654
              ++T  +   Q+
Sbjct: 307 TSALATMRVDYEQI 320

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  135 bits (340), Expect = 5e-36
 Identities = 47/275 (17%), Positives = 94/275 (34%), Gaps = 32/275 (11%)

Query: 364 FKQSEVIGTGGFGEVYKGV--------------LPTRMREFAAEIESLGRLRHKHLVNLQ 409
           ++    IG+G FG++Y G               + T+  +   E +    ++    +   
Sbjct: 9   YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 68

Query: 410 GWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVV 469
            WC  + D  ++   +   SL+  LF+  +   S +    +   + + + Y+H +     
Sbjct: 69  RWCGAEGDYNVMVMELLGPSLE-DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---F 124

Query: 470 IHRDVKSGNVLI---DADMNARLGDFGLARLFDHGKIS------HTTNVVGTIGYIAPEL 520
           IHRDVK  N L+          + DFGLA+ +   +           N+ GT  Y +   
Sbjct: 125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT 184

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
               + S   D+ + G +L+    G  P             E +   + +      L   
Sbjct: 185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE-RISEKKMSTPIEVLCKG 243

Query: 581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
           Y       +      C   + + +P    + +   
Sbjct: 244 YPSEFATYLNF----CRSLRFDDKPDYSYLRQLFR 274

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  137 bits (345), Expect = 5e-36
 Identities = 53/212 (25%), Positives = 80/212 (37%), Gaps = 31/212 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA----------------------AEIESLGRLR 401
           F    +IG GGFGEVY        + +A                        +  +    
Sbjct: 6   FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
              +V +         L  + D +  G L   L  +  F             I  GL ++
Sbjct: 66  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS--EADMRFYAAEIILGLEHM 123

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELA 521
           H  +   V++RD+K  N+L+D   + R+ D GLA  F   K       VGT GY+APE+ 
Sbjct: 124 HNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVL 177

Query: 522 RTGKA-SCSTDVFAYGVLLLEIATGRRPIDSD 552
           + G A   S D F+ G +L ++  G  P    
Sbjct: 178 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 209

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  134 bits (337), Expect = 9e-36
 Identities = 60/282 (21%), Positives = 98/282 (34%), Gaps = 38/282 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLV 406
           +   E IG G +G VYK                             EI  L  L+H ++V
Sbjct: 4   YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L      K+ L+LV++++       L        L      + +  +  G+ Y H+   
Sbjct: 64  KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRR- 120

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
             V+HRD+K  N+LI+ +   ++ DFGLAR F      +T  +V         L  + K 
Sbjct: 121 --VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178

Query: 527 SCSTDVFAYGVLLLEIATGRRPIDSDH--------------FILVDW--VLEFQHLGQVL 570
           S + D+++ G +  E+  G                          +W  V E        
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238

Query: 571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
            V +P    S++    E  + L           R T +Q L 
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 1e-35
 Identities = 50/210 (23%), Positives = 84/210 (40%), Gaps = 26/210 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-------------------PTRMREFAAEIESLGR-LRHK 403
           F   +++G G FG+V+                          +     E   L     H 
Sbjct: 4   FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63

Query: 404 HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
            L ++    + K +L  V +Y+  G L   +     F     +       I  GL +L  
Sbjct: 64  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF--DLSRATFYAAEIILGLQFL-- 119

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
              + +++RD+K  N+L+D D + ++ DFG+ +    G     T   GT  YIAPE+   
Sbjct: 120 -HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT-FCGTPDYIAPEILLG 177

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
            K + S D +++GVLL E+  G+ P     
Sbjct: 178 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 207

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 2e-35
 Identities = 54/271 (19%), Positives = 91/271 (33%), Gaps = 52/271 (19%)

Query: 368 EVIGTGGFGEVYKGV----------------------LPTRMREFAAEIESLGRLRHKH- 404
            ++G+GGFG VY G+                                E+  L ++     
Sbjct: 10  PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFS 69

Query: 405 -LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE 463
            ++ L  W +R    +L+ +              E   L  E   +    +   + +   
Sbjct: 70  GVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHC-- 126

Query: 464 EWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELAR 522
                V+HRD+K  N+LID +    +L DFG   L      +  T+  GT  Y  PE  R
Sbjct: 127 -HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD---TVYTDFDGTRVYSPPEWIR 182

Query: 523 TGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY 581
             +    S  V++ G+LL ++  G  P + D  I+   V   Q +               
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSEC----------- 231

Query: 582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
                 L+      C   +   RPT  ++  
Sbjct: 232 ----QHLIRW----CLALRPSDRPTFEEIQN 254

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 6e-35
 Identities = 63/282 (22%), Positives = 105/282 (37%), Gaps = 43/282 (15%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFA---------------------AEIESLGRLRHKHLV 406
           + +G G F  VYK       +  A                      EI+ L  L H +++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 407 NLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWE 466
            L      K ++ LV+D++        +  + + VL+       +     GL YLH+ W 
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEV--IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW- 120

Query: 467 QVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
             ++HRD+K  N+L+D +   +L DFGLA+ F     ++ T+ V T  Y APEL    + 
Sbjct: 121 --ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY-THQVVTRWYRAPELLFGARM 177

Query: 527 -SCSTDVFAYGVLLLEIATGRRPIDSDH--------------FILVDWVLEFQHLGQVLD 571
                D++A G +L E+      +  D                    W         V  
Sbjct: 178 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 237

Query: 572 VVDPNLGSSYVVAEM-ELVLQLGLLCSHQKAEARPTMRQVLR 612
              P +   ++ +   + +L L          AR T  Q L+
Sbjct: 238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  132 bits (332), Expect = 1e-34
 Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 28/209 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-------------------PTRMREFAAEIESLGRLRHKH 404
           F+    +GTG FG V+                         ++     E   L  + H  
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           ++ + G  +  + + ++ DYI  G L SLL  ++ F     + +      A   L L   
Sbjct: 66  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY-----AAEVCLALEYL 120

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
             + +I+RD+K  N+L+D + + ++ DFG A+         T  + GT  YIAPE+  T 
Sbjct: 121 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYTLCGTPDYIAPEVVSTK 176

Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDH 553
             + S D +++G+L+ E+  G  P    +
Sbjct: 177 PYNKSIDWWSFGILIYEMLAGYTPFYDSN 205

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (329), Expect = 1e-34
 Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 22/208 (10%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA------------------AEIESLGRLRHKHL 405
           F++ E IG G +G VYK          A                   EI  L  L H ++
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V L      +  L LV+++  +  L   +  +    +      + +  +  GL + H   
Sbjct: 64  VKLLDVIHTENKLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
              V+HRD+K  N+LI+ +   +L DFGLAR F     ++T  VV         L     
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179

Query: 526 ASCSTDVFAYGVLLLEIATGRRPIDSDH 553
            S + D+++ G +  E+ T R     D 
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDS 207

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (332), Expect = 2e-34
 Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 26/211 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA------------AEIESLGRLRHKHLVNLQGW 411
           +  ++VIG G FG VY+  L       A             E++ + +L H ++V L+ +
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81

Query: 412 C------KRKRDLLLVYDYIPNGSLDSLL-FDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
                  K +  L LV DY+P         +      L        +  +   L Y+H  
Sbjct: 82  FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141

Query: 465 WEQVVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAP-ELAR 522
               + HRD+K  N+L+D D    +L DFG A+    G+ + +   + +  Y AP  +  
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY--ICSRYYRAPELIFG 196

Query: 523 TGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
               + S DV++ G +L E+  G+     D 
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 2e-34
 Identities = 57/275 (20%), Positives = 106/275 (38%), Gaps = 42/275 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFAA----------------------EIESLGRLR 401
           +   E +G+G F  V K    +   ++AA                      E+  L  ++
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYL 461
           H +++ L    + K D++L+ + +  G L   L + E+     E+    +K I  G+ YL
Sbjct: 72  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT--EEEATEFLKQILNGVYYL 129

Query: 462 HEEWEQVVIHRDVKSGNVLIDADMNAR----LGDFGLARLFDHGKISHTTNVVGTIGYIA 517
           H      + H D+K  N+++      +    + DFGLA   D G  +   N+ GT  ++A
Sbjct: 130 HSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVA 184

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
           PE+          D+++ GV+   + +G  P   D         + + L  V   V+   
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANVSA-VNYEF 235

Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
              Y      L          +  + R T++  L+
Sbjct: 236 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 3e-34
 Identities = 50/220 (22%), Positives = 89/220 (40%), Gaps = 24/220 (10%)

Query: 357 LYTATKGFKQSEVIGTGGFGEVYKGV-----------------LPTRMREFAAEIESLGR 399
           ++     +     IG G +G V                       T  +    EI+ L R
Sbjct: 3   VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 62

Query: 400 LRHKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN-ENFVLSWEQRFNIIKGIAAGL 458
            RH++++ +    +      +   Y+    + + L+   +   LS +     +  I  GL
Sbjct: 63  FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 122

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT--TNVVGTIGYI 516
            Y+H      V+HRD+K  N+L++   + ++ DFGLAR+ D         T  V T  Y 
Sbjct: 123 KYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 179

Query: 517 APELARTGKASC-STDVFAYGVLLLEIATGRRPIDSDHFI 555
           APE+    K    S D+++ G +L E+ + R      H++
Sbjct: 180 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 219

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (326), Expect = 4e-34
 Identities = 57/289 (19%), Positives = 96/289 (33%), Gaps = 45/289 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGV----------------------LPTRMREFAAEIESLGRLR 401
           ++    IG G +G+V+K                        +P       A +  L    
Sbjct: 9   YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68

Query: 402 HKHLVNLQGWCKRKRDLLLVYDYIPN----GSLDSLLFDNENFVLSWEQRFNIIKGIAAG 457
           H ++V L   C   R        +        L + L       +  E   +++  +  G
Sbjct: 69  HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 128

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIA 517
           L +LH      V+HRD+K  N+L+ +    +L DFGLAR++        T+VV T+ Y A
Sbjct: 129 LDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRA 183

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILV--------------DWVLEF 563
           PE+      +   D+++ G +  E+   +        +                DW  + 
Sbjct: 184 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 243

Query: 564 QHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
               Q            +V    EL   L L C       R +    L 
Sbjct: 244 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  129 bits (325), Expect = 5e-34
 Identities = 45/278 (16%), Positives = 89/278 (32%), Gaps = 36/278 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA--------------AEIESLGRLRH-KHLVNL 408
           +K    IG G FG +++G      ++ A               E  +   L     + N+
Sbjct: 7   YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 66

Query: 409 QGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV 468
             + +     +LV D +     D  L D      S +      K + A +  +HE   + 
Sbjct: 67  YYFGQEGLHNVLVIDLLGPSLED--LLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KS 121

Query: 469 VIHRDVKSGNVLIDADMN-----ARLGDFGLARLFDHGKIS------HTTNVVGTIGYIA 517
           +++RD+K  N LI    +       + DFG+ + +               N+ GT  Y++
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS 181

Query: 518 PELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL 577
                  + S   D+ A G + +    G  P              ++ +G+         
Sbjct: 182 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQK--YERIGEKKQSTPLRE 239

Query: 578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN 615
             +    E    +       +   +A P    +    +
Sbjct: 240 LCAGFPEEFYKYMH---YARNLAFDATPDYDYLQGLFS 274

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score =  121 bits (306), Expect = 5e-32
 Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 23/163 (14%)

Query: 144 SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPV 203
           ++ + A+E DT     +  D    H+GI++ S++S K              + +++G   
Sbjct: 1   ADTIVAVELDTYPN-TDIGDPSYPHIGIDIKSVRSKKTAK-----------WNMQNGKVG 48

Query: 204 QAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAST 263
            A I Y+ V++ ++               +       +S  +DL     E + VG SAST
Sbjct: 49  TAHIIYNSVDKRLSAV-----------VSYPNADSATVSYDVDLDNVLPEWVRVGLSAST 97

Query: 264 GRKVSSHFILGWSFSMNGAAPSLNLSQIPSLPIERSSSNSFSL 306
           G    ++ IL WSF+    + S + +        + S +   L
Sbjct: 98  GLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDL 140

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score = 85.8 bits (212), Expect = 2e-19
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 14/115 (12%)

Query: 32  FNETKTNQGLITRERASILKPSGALRLTDNAHNV------IGHAFYNKPIQMLDKSTSLS 85
           FN+   +Q  +  +  +     G L LT  + N       +G A +  P+ + + S    
Sbjct: 130 FNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSA--- 186

Query: 86  SKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNSTN 139
                +SF   F F I +P+S     G+AF +S   S  P G     LG+    N
Sbjct: 187 ---VVASFEATFTFLIKSPDSH-PADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 8e-32
 Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 35/219 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA------------------AEIESLGRLRHKHL 405
           +++   IG G FGEV+K       ++ A                   EI+ L  L+H+++
Sbjct: 12  YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 71

Query: 406 VNLQGWC--------KRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAG 457
           VNL   C        + K  + LV+D+  +     L      F LS  +R      +   
Sbjct: 72  VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-----MQML 126

Query: 458 LLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS---HTTNVVGTIG 514
           L  L+      ++HRD+K+ NVLI  D   +L DFGLAR F   K S     TN V T+ 
Sbjct: 127 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW 186

Query: 515 YIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSD 552
           Y  PEL    +      D++  G ++ E+ T    +  +
Sbjct: 187 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 225

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 4e-31
 Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 25/209 (11%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA-------------------AEIESLGRLRHKH 404
           F   +++G G FG+V         R +A                    E   L   RH  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           L  L+   +    L  V +Y   G L   L  +   V + E+       I + L      
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSAL---EYL 121

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
             + V++RD+K  N+++D D + ++ DFGL +       +      GT  Y+APE+    
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLEDN 180

Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDH 553
               + D +  GV++ E+  GR P  +  
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (295), Expect = 5e-30
 Identities = 55/284 (19%), Positives = 95/284 (33%), Gaps = 40/284 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVL------------------PTRMREFAAEIESLGRLRHKHL 405
           +++ E IG G +G V+K                              EI  L  L+HK++
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW 465
           V L       + L LV+++            N +      + F     +   L  L    
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF-----LFQLLKGLGFCH 118

Query: 466 EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGK 525
            + V+HRD+K  N+LI+ +   +L +FGLAR F      ++  VV         L     
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178

Query: 526 ASCSTDVFAYGVLLLEIATGRRPI-----DSDHFILVDWVLEFQHLGQVLDVVDPNLGSS 580
            S S D+++ G +  E+A   RP+       D    +  +L      Q   +        
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238

Query: 581 YVVAEMELVLQLGLLCSHQKA------------EARPTMRQVLR 612
           Y +      L   +   +                 R +  + L+
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  119 bits (298), Expect = 7e-30
 Identities = 54/209 (25%), Positives = 82/209 (39%), Gaps = 28/209 (13%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA-------------------AEIESLGRLRHKH 404
           F + + +GTG FG V           +A                    E   L  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102

Query: 405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE 464
           LV L+   K   +L +V +Y+  G + S L     F  S          I     YLH  
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF--SEPHARFYAAQIVLTFEYLHSL 160

Query: 465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTG 524
               +I+RD+K  N+LID     ++ DFG A+         T  + GT   +APE+  + 
Sbjct: 161 D---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEALAPEIILSK 213

Query: 525 KASCSTDVFAYGVLLLEIATGRRPIDSDH 553
             + + D +A GVL+ E+A G  P  +D 
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQ 242

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 3e-28
 Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 31/216 (14%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTR-----------------------MREFAAEIESLGRL 400
           F+  +V+GTG +G+V+     +                              E + L  +
Sbjct: 26  FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 85

Query: 401 RHK-HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLL 459
           R    LV L    + +  L L+ DYI  G L + L   E F         +   +   +L
Sbjct: 86  RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE-----VQIYVGEIVL 140

Query: 460 YLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPE 519
            L    +  +I+RD+K  N+L+D++ +  L DFGL++ F   +     +  GTI Y+AP+
Sbjct: 141 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 200

Query: 520 LARTGKA--SCSTDVFAYGVLLLEIATGRRPIDSDH 553
           + R G +    + D ++ GVL+ E+ TG  P   D 
Sbjct: 201 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 236

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 6e-28
 Identities = 51/287 (17%), Positives = 100/287 (34%), Gaps = 44/287 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGVLPTRMREFA------------------AEIESLGRLRHKHL 405
           ++  + +G+G +G V   V      + A                   E+  L  +RH+++
Sbjct: 20  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 79

Query: 406 VNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHE 463
           + L         L    D+               ++  L  ++   ++  +  GL Y+H 
Sbjct: 80  IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA 139

Query: 464 EWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELART 523
                  HRD+K GN+ ++ D   ++ DFGLAR  D      T  VV         +   
Sbjct: 140 AGII---HRDLKPGNLAVNEDCELKILDFGLARQADS---EMTGYVVTRWYRAPEVILNW 193

Query: 524 GKASCSTDVFAYGVLLLEIATGRRPIDSD------------------HFILVDWVLEFQH 565
            + + + D+++ G ++ E+ TG+                         F+      E ++
Sbjct: 194 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 253

Query: 566 LGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR 612
             + L  ++    +S +     L + L        AE R T  + L 
Sbjct: 254 YMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  110 bits (275), Expect = 4e-27
 Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 28/222 (12%)

Query: 364 FKQSEVIGTGGFGEVYKGVL-------------PTRMREFAAEIESLGRLR-HKHLVNLQ 409
           ++    +G G + EV++ +              P + ++   EI+ L  LR   +++ L 
Sbjct: 37  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 96

Query: 410 GWCKR--KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQ 467
              K    R   LV++++ N     L        L+       +  I   L Y H     
Sbjct: 97  DIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-- 149

Query: 468 VVIHRDVKSGNVLIDAD-MNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKA 526
            ++HRDVK  NV+ID +    RL D+GLA  +  G+       V +  +  PEL    + 
Sbjct: 150 -IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELLVDYQM 206

Query: 527 -SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLG 567
              S D+++ G +L  +   + P    H      V   + LG
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 248

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 2e-26
 Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 35/231 (15%)

Query: 350 HRFRYSDL-YTATKGFKQSEVIGTGGFGEVYKGVLPTRMREFA----------------- 391
           +     D  +T  K ++  + IG+G  G V         R  A                 
Sbjct: 4   YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 63

Query: 392 -AEIESLGRLRHKHLVNLQGWCKRKR------DLLLVYDYIPNGSLDSLLFDNENFVLSW 444
             E+  +  + HK++++L      ++      D+ LV + +       +  +        
Sbjct: 64  YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-----DH 118

Query: 445 EQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS 504
           E+   ++  +  G+ +LH      +IHRD+K  N+++ +D   ++ DFGLAR        
Sbjct: 119 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-- 173

Query: 505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI 555
             T  V T  Y APE+        + D+++ G ++ E+   +       +I
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 1e-23
 Identities = 40/213 (18%), Positives = 82/213 (38%), Gaps = 32/213 (15%)

Query: 364 FKQSEVIGTGGFGEVYKGVL------------------PTRMREFAAEIESLGRLRHKHL 405
           ++    +G+G +G V                           +    E+  L  ++H+++
Sbjct: 20  YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79

Query: 406 VNLQGWCKRKRDL-----LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLY 460
           + L       R L     + +  ++    L++++   +   L+ +    +I  I  GL Y
Sbjct: 80  IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKY 136

Query: 461 LHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTNVVGTIGYIAPEL 520
           +H      +IHRD+K  N+ ++ D   ++ DFGLAR  D      T  V          +
Sbjct: 137 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYVATRWYRAPEIM 190

Query: 521 ARTGKASCSTDVFAYGVLLLEIATGRRPIDSDH 553
                 + + D+++ G ++ E+ TGR       
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 92.5 bits (229), Expect = 8e-22
 Identities = 25/225 (11%), Positives = 51/225 (22%), Gaps = 37/225 (16%)

Query: 53  SGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFG 112
           +  +R+  +  +  G  +                     ++        VT     G  G
Sbjct: 36  ADQIRIAPSLKSQRGSVWTKTKA-------------AFENWEVEV-TFRVTGRGRIGADG 81

Query: 113 LAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGIN 172
           LA   +      G       G  +         +   I FD+   ++         + + 
Sbjct: 82  LAIWYTENQGLDGP----VFGSADM-------WNGVGIFFDS---FDNDGKKNNPAIVVV 127

Query: 173 VNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFH 232
            N+ +                        P           + + V I         +  
Sbjct: 128 GNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMI---------NNG 178

Query: 233 FGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSF 277
           F              +       + G SA+TG     H +L +  
Sbjct: 179 FTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLT 223

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 93.9 bits (232), Expect = 2e-21
 Identities = 49/236 (20%), Positives = 82/236 (34%), Gaps = 35/236 (14%)

Query: 368 EVIGTGGFGEVYKGVLPTRMREFA---------------AEIESLGRLRHKHLVNLQGWC 412
             +G G F  V+           A                EI+ L R+            
Sbjct: 19  RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 413 KRKRDLLLVY--DYIPNGSL------------DSLLFDNENFVLSWEQRFNIIKGIAAGL 458
                 LL +     PNG               +L+   E+  +       I K +  GL
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138

Query: 459 LYLHEEWEQVVIHRDVKSGNVLIDA-DMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYI 516
            Y+H      +IH D+K  NVL++  D    L    +A L +      H TN + T  Y 
Sbjct: 139 DYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 196

Query: 517 APELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDV 572
           +PE+       C  D+++   L+ E+ TG    + D      +  +  H+ Q++++
Sbjct: 197 SPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH--SYTKDDDHIAQIIEL 250

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 77.1 bits (189), Expect = 7e-17
 Identities = 24/158 (15%), Positives = 45/158 (28%), Gaps = 34/158 (21%)

Query: 368 EVIGTGGFGEVYKGVLPT-------------------------RMREFAAEIESLGRLRH 402
           +++G G    V+                                   F+       R   
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 403 KHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLH 462
           + L  LQG    K      Y +  N  L  L+   E + +  E    ++  I   +   +
Sbjct: 66  RALQKLQGLAVPKV-----YAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY 120

Query: 463 EEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH 500
                 ++H D+   NVL+  +    + DF  +     
Sbjct: 121 HRG---IVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGE 154

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.8 bits (116), Expect = 5e-07
 Identities = 30/226 (13%), Positives = 55/226 (24%), Gaps = 48/226 (21%)

Query: 53  SGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFG 112
            G   LT   +   G  +      + D  T              + F+      G    G
Sbjct: 34  EGRFVLTPGKNTK-GSLWLKPEYSIKDAMTIE------------WTFRSFGF-RGSTKGG 79

Query: 113 LAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGIN 172
           LAF +                +   ++          I            D  G  V   
Sbjct: 80  LAFWLKQGNEGDST------ELFGGSSKKFNG---LMILLRL-------DDKLGESVTAY 123

Query: 173 VNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLV-NVTICPMNKKNKLSF 231
           +N   +  L+  +     +      +S  P    + Y+ ++  +  + +      N++ F
Sbjct: 124 LND-GTKDLDIESSPYFASCLFQYQDSMVPSTLRLTYNPLDNHLLKLQM-----DNRVCF 177

Query: 232 HFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSF 277
              K                     +G SA       S  IL    
Sbjct: 178 QTRKVKFM-----------GSSPFRIGTSAINDASKESFEILKMKL 212

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.8 bits (108), Expect = 6e-06
 Identities = 45/262 (17%), Positives = 81/262 (30%), Gaps = 51/262 (19%)

Query: 21  SQQKEEFIF-NGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLD 79
           S+   ++   +  N  K      T E+AS+    G + LT N ++  G  +  +   + D
Sbjct: 4   SKLSSDYSLPDLINTRKVPNNWQTGEQASLE--EGRIVLTSNQNSK-GSLWLKQGFDLKD 60

Query: 80  KSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTN 139
                       SF+  + F+ V   SGQ   G++F      +         +       
Sbjct: 61  ------------SFTMEWTFRSVGY-SGQTDGGISFWFVQDSN---------IPRDKQLY 98

Query: 140 DHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLES 199
           +   +     +  D  NG    +     + G        I  +  A    G       +S
Sbjct: 99  NGPVNYDGLQLLVDN-NGPLGPTLRGQLNDGQKPVDKTKIYDQSFASCLMGY-----QDS 152

Query: 200 GDPVQAWIDYD-GVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVG 258
             P    + YD   + L+ V +      NK+ F   K   P              +  +G
Sbjct: 153 SVPSTIRVTYDLEDDNLLKVQV-----DNKVCFQTRKVRFP------------SGSYRIG 195

Query: 259 FSASTGRKVSSHFILGWSFSMN 280
            +A  G   ++       F M 
Sbjct: 196 VTAQNGAVNNNAESFEI-FKMQ 216

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	670
d1hqla_	236	Legume lectin {Griffonia simplicifolia, lectin I-b	100.0
d1leda_	243	Legume lectin {West-central african legume (Griffo	100.0
d1fx5a_	240	Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI	100.0
d1qnwa_	237	Legume lectin {Furze (Ulex europaeus), UEA-II [Tax	100.0
d1gzca_	239	Legume lectin {Cockspur coral tree (Erythrina cris	100.0
d2d3sa1	237	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
d1g9fa_	251	Legume lectin {Soybean (Glycine max) [TaxId: 3847]	100.0
d1f9ka_	234	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
d1dbna_	239	Legume lectin {Maackia amurensis, leukoagglutinin	100.0
d1g8wa_	233	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1v6ia_	232	Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3	100.0
d1g7ya_	253	Legume lectin {Horse gram (Dolichos biflorus), dif	100.0
d1fnya_	237	Legume lectin {Black locust (Robinia pseudoacacia)	100.0
d1n47a_	233	Legume lectin {Hairy vetch (Vicia villosa), isolec	100.0
g1qmo.1	230	Legume lectin {Field bean (Dolichos lablab), Fril	100.0
d1ukga_	241	Legume lectin {Bloodwood tree (Pterocarpus angolen	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
g2ltn.1	229	Legume lectin {Garden pea (Pisum sativum) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ioaa_	228	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1avba_	226	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1dhkb_	204	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.97
d1gv9a_	228	Carbohydrate-recognition domain of P58/ERGIC-53 {R	99.94
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.9
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.79
d2a6za1	221	Emp47p N-terminal domain {Baker's yeast (Saccharom	99.79
d2a6va1	218	Emp46p N-terminal domain {Baker's yeast (Saccharom	99.78
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.75
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.08
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.86
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	94.65
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	92.91

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=100.00  E-value=2.3e-56  Score=445.72  Aligned_cols=226  Identities=32%  Similarity=0.489  Sum_probs=198.8

Q ss_pred             ceeEEeCCCCCCC-CCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           24 KEEFIFNGFNETK-TNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        24 ~~~f~~~~f~~~~-~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      +++|+|++|+++. .+   |.++|+|.+. +|.|+||+..      ..++|||+|++||+||++.++     +++||+|+
T Consensus         1 ~~sF~f~~F~~~~~~~---l~l~G~A~~~-~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~t~-----~~asFsT~   71 (236)
T d1hqla_           1 SVSFTFPNFWSDVEDS---IIFQGDANTT-AGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTE-----SVASFYTE   71 (236)
T ss_dssp             CCEEEESCSCSCGGGT---EEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTC-----CCCEEEEE
T ss_pred             CEEEEeCCCCCCCcCC---EEEeccEEec-CCEEEEecCCCCCcccccceEEEEECCCEEeecCCCC-----ceeEEEEE
Confidence            4799999998642 34   9999999996 8999999754      458899999999999999999     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCC-CCCcEEEEEeeecCCCCCCCCCCCCeeEEecCC
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHK-PSNHLFAIEFDTVNGYNETSDSQGNHVGINVNS  175 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~-~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns  175 (670)
                      |+|.|.+. ...+||||||||+|... +.+..|++||+++..++++ ..+++|||||||++| .+++||++||||||+||
T Consensus        72 F~F~i~~~-~~~~gDGlAFvl~p~~~-~~~~~G~~lGl~~~~~~~~~~~~~~vAVEFDT~~n-~~~~D~~~nHIgIdvns  148 (236)
T d1hqla_          72 FTFFLKIT-GNGPADGLAFFLAPPDS-DVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTN-PNFPEPSYRHIGINVNS  148 (236)
T ss_dssp             EEEEEEEC-SSCCCCEEEEEEECTTC-CCCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCC-SSSCCCSSCEEEEEESS
T ss_pred             EEEEEeCC-CCCCCceEEEEEeCCCC-CCCCCccccccccccccCCcccCceEEEEeeCccC-CCCCCCCCCEEEEEcCC
Confidence            99999875 45789999999999764 4567899999999876554 579999999999999 78899999999999999


Q ss_pred             cccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccc
Q 035655          176 MKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETM  255 (670)
Q Consensus       176 ~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~  255 (670)
                      ++|..+.+.        ...++.+|+.++|||+||+.+++|+|+|++           .+|..|+|++.|||+++|+++|
T Consensus       149 ~~s~~~~~~--------~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~-----------~~~~~~~ls~~vdL~~~l~~~v  209 (236)
T d1hqla_         149 IVSVATKRW--------EDSDIFSGKIATARISYDGSAEILTVVLSY-----------PDGSDYILSHSVDMRQNLPESV  209 (236)
T ss_dssp             SSCSEEEEC--------CHHHHTSCSCEEEEEEEETTTTEEEEEEEE-----------TTTEEEEEEEECCGGGTSCSEE
T ss_pred             ccccccccc--------ccccccCCCEEEEEEEEeCCCcEEEEEEec-----------CCCCCeeEEEEeCHHHhCCCcE
Confidence            999887663        346788999999999999999999999975           3566789999999999999999


Q ss_pred             eeeEeecCCce-eeeEEEeccccccC
Q 035655          256 YVGFSASTGRK-VSSHFILGWSFSMN  280 (670)
Q Consensus       256 ~vGFsastg~~-~~~h~i~sW~fs~~  280 (670)
                      |||||||||.. .+.|+|++|+|+++
T Consensus       210 ~vGFSasTG~~~~~~h~I~sWsF~s~  235 (236)
T d1hqla_         210 RVGISASTGNNQFLTVYILSWRFSSN  235 (236)
T ss_dssp             EEEEEEECCSCCCEEEEEEEEEEEEE
T ss_pred             EEEEEeECCCCCceEEEEEEeEeEec
Confidence            99999999974 68899999999874

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

Probab=100.00  E-value=2.9e-55  Score=439.28  Aligned_cols=227  Identities=27%  Similarity=0.401  Sum_probs=198.0

Q ss_pred             CCceeEEeCCCCCC----CCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCcc
Q 035655           22 QQKEEFIFNGFNET----KTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNAS   91 (670)
Q Consensus        22 ~~~~~f~~~~f~~~----~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~   91 (670)
                      +++++|+|++|.+.    ..+   |.++|+|.+. +|.|+||+..      .+++|||+|++||+||++ ++     +++
T Consensus         1 ~~s~sF~f~~F~~~~~~~~~~---l~l~G~A~~~-~g~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~-t~-----~~a   70 (243)
T d1leda_           1 ENTVNFTYPDFWSYSLKNGTE---ITFLGDATRI-PGALQLTKTDANGNPVRSSAGQASYSEPVFLWDS-TG-----KAA   70 (243)
T ss_dssp             CCCCEEEESCBCCTTSCTTTS---EEEEETCEEE-TBEEECSCBCTTSCBCSSEEEEEEESSCEECBCT-TS-----CBC
T ss_pred             CCceEEEcCCCCCCCCCCCCc---EEEeeeeEEc-CCEEEeccCCCCCCccccceEEEEeCCCeEecCC-CC-----cEe
Confidence            35799999999753    235   9999999997 8999999653      368999999999999985 56     899


Q ss_pred             ceeEEEEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCC-CCCcEEEEEeeecCCCCCCCCCCCCeeE
Q 035655           92 SFSTCFVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHK-PSNHLFAIEFDTVNGYNETSDSQGNHVG  170 (670)
Q Consensus        92 sFst~F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~-~~~~~vaVEFDt~~n~~~~~Dp~~~Hvg  170 (670)
                      ||+|+|+|.|.+. ...+||||||||+|.+. +.+..|++||+++..+.++ ..+++|||||||++| .+++||++||||
T Consensus        71 sFsT~F~f~i~~~-~~~~gdGlAF~l~p~~~-~~~~~g~~lGl~~~~~~~~~~~~~~vAVEFDT~~n-~~~~d~~~nHVg  147 (243)
T d1leda_          71 SFYTSFTFLLKNY-GAPTADGLAFFLAPVDS-SVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWIN-KDWNDPPYPHIG  147 (243)
T ss_dssp             EEEEEEEEEEEES-SSSCBCEEEEEEEETTC-CCCCCGGGTTTCCTTTTTCGGGCCCEEEEEECSCC-GGGTCCSSCEEE
T ss_pred             eEEEEEEEEcCCC-CCCCCCceEEEEcCCCC-CCCCCccccccccccccCCCccCcEEEEEEeCccc-cccCCCCCCceE
Confidence            9999999988765 45689999999999764 5567899999998877655 579999999999999 788899999999


Q ss_pred             EecCCcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccc
Q 035655          171 INVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPA  250 (670)
Q Consensus       171 idvns~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~  250 (670)
                      ||+|++.|..++++.        ..++.+|+.++|||+||+.+++|+|+|++           .+|..|+|++.|||+++
T Consensus       148 Idvns~~s~~~~~~~--------~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~-----------~~~~~p~ls~~idL~~~  208 (243)
T d1leda_         148 IDVNSIVSVATTRWE--------NDDAYGSSIATAHITYDARSKILTVLLSY-----------EHGRDYILSHVVDLAKV  208 (243)
T ss_dssp             EEESSSSCSEEEECC--------HHHHTSCCEEEEEEEEETTTTEEEEEEEE-----------TTSCEEEEEEECCHHHH
T ss_pred             EEecCcccccccccc--------cCCcccCceeEEEEEEECCCCEEEEEEee-----------CCCCCceEEEecCHHHh
Confidence            999999998877642        35788999999999999999999999985           35667899999999999


Q ss_pred             ccccceeeEeecCCceeeeEEEeccccccCC
Q 035655          251 FQETMYVGFSASTGRKVSSHFILGWSFSMNG  281 (670)
Q Consensus       251 l~~~~~vGFsastg~~~~~h~i~sW~fs~~~  281 (670)
                      |+++||||||||||. .|.|+|++|+|+++.
T Consensus       209 l~~~vyvGFSAsTG~-~~~h~I~sWsF~s~l  238 (243)
T d1leda_         209 LPQKVRIGFSAGVGY-DEVTYILSWHFFSTL  238 (243)
T ss_dssp             SCSEEEEEEEEEECB-SEEEEEEEEEEEEEC
T ss_pred             cCCcEEEEEEcccCC-cceeeEEEEEEEeeC
Confidence            999999999999995 699999999999763

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

Probab=100.00  E-value=9.9e-55  Score=436.45  Aligned_cols=230  Identities=26%  Similarity=0.374  Sum_probs=201.2

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC----CCeEEEEEecCceeeecCCCCCCCCCCccceeEEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA----HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFV   98 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~----~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~   98 (670)
                      +++||+|++|.+...+   |.++|+|.+.++|.|+||+..    .++.|||+|++||+|||+.++     +++||+|+|+
T Consensus         2 ~~~sF~f~~F~~~~~~---l~l~G~A~~~~~g~l~LT~~~~~~~~~~~G~a~y~~Pv~l~~~~t~-----~~~sF~t~F~   73 (240)
T d1fx5a_           2 DDLSFKFKNFSQNGKD---LSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTG-----ELASFITSFS   73 (240)
T ss_dssp             CEEEEEESSCCTTCSS---EEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTT-----EECEEEEEEE
T ss_pred             CceEEECCCCCCCCCC---EEEeeeeEecCCCEEEccCCCCCCccceeEEEecCCCceeecCCCC-----ceeeeEEEEE
Confidence            5799999999865566   999999998878999999765    357899999999999999999     8999999999


Q ss_pred             EEEecC-CCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcc
Q 035655           99 FQIVTP-NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMK  177 (670)
Q Consensus        99 f~i~~~-~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~  177 (670)
                      |.|..+ +...+||||||||+|.. .|.+..|++|||++.++ +++.+++|||||||++|..+++||++||||||+||+.
T Consensus        74 f~i~~~~~~~~ggdG~AFvl~p~~-~~~~~~g~~lGl~~~~~-~~~~~~~vAVEFDT~~n~~~~~D~~~nHIgid~ns~~  151 (240)
T d1fx5a_          74 FFMETSANPKAATDGLTFFLAPPD-SPLRRAGGYFGLFNDTK-CDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVK  151 (240)
T ss_dssp             EEEEESSCGGGCCCEEEEEEECTT-CCCCBCGGGTTTBSSSC-CCGGGCCEEEEEECCCTTTSTTSCSSCEEEEEESSSS
T ss_pred             EEEeCCCCCCCCCCcEEEEECCCC-CCCCCCCccccccccCC-CCccCceEEEEeeccccccccCCCCCCceEEccCCcc
Confidence            999755 34568999999999975 47789999999998765 3567899999999999834789999999999999999


Q ss_pred             cccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccccccccee
Q 035655          178 SIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYV  257 (670)
Q Consensus       178 s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~v  257 (670)
                      +..+.+.         +..+.+|+.++|||+||+.+++|+|+|.+.+          +|..|+|+..|||+++|+++|||
T Consensus       152 s~~~~~~---------~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~----------~~~~~~ls~~vdLs~~l~~~v~v  212 (240)
T d1fx5a_         152 SINAERW---------NKRYGLNNVANVEIIYEASSKTLTASLTYPS----------DQTSISVTSIVDLKEILPEWVSV  212 (240)
T ss_dssp             CSEEEEC---------CCCCSGGGCEEEEEEEETTTTEEEEEEEETT----------TTEEEEEEEECCGGGTSCSEEEE
T ss_pred             ccccccc---------ccccCCCCeEEEEEEEcCCCCEEEEEEecCC----------CceeeEEeEEEchHHhCCCcEEE
Confidence            8777652         3567789999999999999999999998643          56788999999999999999999


Q ss_pred             eEeecCCc-eeeeEEEeccccccCC
Q 035655          258 GFSASTGR-KVSSHFILGWSFSMNG  281 (670)
Q Consensus       258 GFsastg~-~~~~h~i~sW~fs~~~  281 (670)
                      |||||||. ..|.|+|++|+|+++.
T Consensus       213 GFSasTG~~~~~~H~I~sWsFsst~  237 (240)
T d1fx5a_         213 GFSGSTYIGRQATHEVLNWYFTSTF  237 (240)
T ss_dssp             EEEEEEETTSCEEEEEEEEEEEEES
T ss_pred             EEEeECCCCCCceEEEEEEEeEEec
Confidence            99999995 6799999999999763

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

Probab=100.00  E-value=6.8e-54  Score=429.84  Aligned_cols=226  Identities=31%  Similarity=0.538  Sum_probs=199.0

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC---CCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA---HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVF   99 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~---~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f   99 (670)
                      ++++|+|++|++...+   |.++|+|.+.++|.|+||+..   ..++|||+|++||+||++.++     +++||+|+|+|
T Consensus         2 ~~lsF~f~~F~~~~~~---l~l~GdA~i~~~g~l~LT~~~~~~~~~~G~a~y~~Pi~l~~~~~~-----~~~sF~t~F~f   73 (237)
T d1qnwa_           2 DDLSFNFDKFVPNQKN---IIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITG-----KVASFATSFSF   73 (237)
T ss_dssp             CSEEEEESSCCTTCTT---EEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTC-----CBCEEEEEEEE
T ss_pred             CcEEEEcCCCCCCCCC---EEEeeceEEcCCCeEEeccCCCCccccEEEEEECCCEEecCCCCc-----ceeeEEEEEEE
Confidence            5799999999875556   999999999878999999865   468999999999999999998     89999999999


Q ss_pred             EEecCCCCCCCCcEEEEEcCCCC-CCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCC--CCCCCeeEEecCCc
Q 035655          100 QIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETS--DSQGNHVGINVNSM  176 (670)
Q Consensus       100 ~i~~~~~~~~g~GlaF~l~~~~~-~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~--Dp~~~Hvgidvns~  176 (670)
                      .|.++ ...+||||||+|+|... .|.++.++++|+++..+ ..+.+++|||||||++| .+..  ||++||||||+|++
T Consensus        74 ~i~~~-~~~ggdG~aF~l~p~~~~~~~~~~~~~~g~~~~~~-~~~~~~~vAVEFDT~~n-~~~~~~d~~~nHvgid~ns~  150 (237)
T d1qnwa_          74 VVKAD-KSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSD-SKSSNQIIAVEFDTYFG-KAYNPWDPDFKHIGIDVNSI  150 (237)
T ss_dssp             ECCBS-SSCCCCEEEEEEEETTCCCCTTCCGGGTTTCSSSS-CCTTSCCEEEEEECCCC-TTTCTTSCSSCEEEEEESSS
T ss_pred             EEecC-CCCCcceeEEEEeCCCCCCCCCCccccccccCCCC-CCCcccEEEEEeeceec-CCcCCCCCCCCeEEEECCCC
Confidence            99775 45689999999999875 57788889999988643 46789999999999998 6544  79999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .|..+++           +.+.+|+.++|||+||+.+++|+|++.+.          .+|..|+|++.|||+++|+++||
T Consensus       151 ~s~~~~~-----------~~~~~G~~~~v~I~Yd~~~~~L~V~l~~~----------~~~~~p~ls~~vDLs~~l~~~vy  209 (237)
T d1qnwa_         151 KSIKTVK-----------WDWRNGEVADVVITYRAPTKSLTVCLSYP----------SDGTSNIITASVDLKAILPEWVS  209 (237)
T ss_dssp             SCSEEEE-----------CCCCTTCCEEEEEEEEGGGTEEEEEEECT----------TTCCEEEEEEECCHHHHSCSEEE
T ss_pred             Ccccccc-----------cccCCCcEEEEEEEEcCCCcEEEEEEecC----------CCCccceEEEEEChHHhCCCcEE
Confidence            9877665           56789999999999999999999999754          36788999999999999999999


Q ss_pred             eeEeecCCce--eeeEEEeccccccC
Q 035655          257 VGFSASTGRK--VSSHFILGWSFSMN  280 (670)
Q Consensus       257 vGFsastg~~--~~~h~i~sW~fs~~  280 (670)
                      ||||||||..  .|.|+|++|+|+++
T Consensus       210 vGFSasTG~~~~~q~h~I~sWsF~s~  235 (237)
T d1qnwa_         210 VGFSGGVGNAAEFETHDVLSWYFTSN  235 (237)
T ss_dssp             EEEEEEESCGGGCBCCEEEEEEEEEE
T ss_pred             EEEEeECCCCCCccEeEEEEeEeEEe
Confidence            9999999975  48999999999975

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

Probab=100.00  E-value=7e-54  Score=429.98  Aligned_cols=226  Identities=30%  Similarity=0.517  Sum_probs=198.7

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCC------CeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH------NVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      ++++|+|++|++...+   |.++|+|.+.++|+||||++..      +++|||+|++||+||++.++     +++||+|+
T Consensus         2 ~~~sF~f~~F~~~~~n---l~l~G~A~i~~~g~l~LT~~~~~~~~~~~~~Gr~~y~~Pv~l~~~~~~-----~~~sFst~   73 (239)
T d1gzca_           2 ETISFSFSEFEPGNDN---LTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTG-----TVASFETR   73 (239)
T ss_dssp             EEEEEEESSCCTTCTT---EEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTC-----CBCEEEEE
T ss_pred             eeEEEEeCCCCCCCCC---eEEeeeeEECCCCeEEccCCCCCCcccccceEEEEeCCCeEecCCCCC-----ceeeEEEE
Confidence            4789999999875556   9999999998789999998653      58899999999999999988     89999999


Q ss_pred             EEEEEecCC-CCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCC
Q 035655           97 FVFQIVTPN-SGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNS  175 (670)
Q Consensus        97 F~f~i~~~~-~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns  175 (670)
                      |+|.|..+. ...+||||||+|+|... +.+..+|+||+++..+. ...++.|||||||++|  +++||++||||||+|+
T Consensus        74 F~f~i~~~~~~~~g~dG~aF~l~p~~~-~~~~~~g~lg~~~~~~~-~~~~~~vaVEFDT~~n--~~~d~~~~HvgI~vn~  149 (239)
T d1gzca_          74 FSFSIEQPYTRPLPADGLVFFMGPTKS-KPAQGYGYLGVFNNSKQ-DNSYQTLAVEFDTFSN--PWDPPQVPHIGIDVNS  149 (239)
T ss_dssp             EEEECCCCCSSSCCCEEEEEEEECSSC-CCCCCGGGTTTCSSSSC-CGGGCCEEEEEECSCC--TTSCSSSSEEEEEESS
T ss_pred             EEEEEecCCCCCCCCCeEEEEECCCCC-CCCCCcccccccccCCC-CCccceEEEEEEcccc--CCCCCCCCEEEEEECC
Confidence            999998654 34689999999999875 44578899999877654 3578899999999998  5789999999999999


Q ss_pred             cccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccc
Q 035655          176 MKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETM  255 (670)
Q Consensus       176 ~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~  255 (670)
                      +.|..+.+           .++.+|+.++|||+||+.+++|+|++.+.          .+|..|+|++.|||+++|+++|
T Consensus       150 ~~s~~t~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~----------~~~~~~~ls~~vdL~~~l~~~v  208 (239)
T d1gzca_         150 IRSIKTQP-----------FQLDNGQVANVVIKYDAPSKILHVVLVYP----------SSGAIYTIAEIVDVKQVLPDWV  208 (239)
T ss_dssp             SSCSEEEE-----------CCCCTTCEEEEEEEEETTTTEEEEEEECT----------TTCCEEEEEEECCHHHHSCSEE
T ss_pred             ccccccCC-----------ccccCCCEEEEEEEEeCCCcEEEEEEecC----------CCCcceeeeeEechHHhcCCcE
Confidence            99987765           57889999999999999999999999753          3678899999999999999999


Q ss_pred             eeeEeecCCc---eeeeEEEeccccccCC
Q 035655          256 YVGFSASTGR---KVSSHFILGWSFSMNG  281 (670)
Q Consensus       256 ~vGFsastg~---~~~~h~i~sW~fs~~~  281 (670)
                      |||||||||.   ..|.|+|++|+|+++.
T Consensus       209 yvGFSAsTG~~~~~~~~H~V~sWsF~s~l  237 (239)
T d1gzca_         209 DVGLSGATGAQRDAAETHDVYSWSFQASL  237 (239)
T ss_dssp             EEEEEEEECSSTTCCCCCEEEEEEEEEEE
T ss_pred             EEEEEEEcCCCCCCceeeEEEEEEeEeeC
Confidence            9999999994   6799999999999864

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

Probab=100.00  E-value=1.5e-53  Score=426.77  Aligned_cols=222  Identities=34%  Similarity=0.536  Sum_probs=194.5

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC-----CCeEEEEEecCceeeecCCCCCCCCCCccceeEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA-----HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCF   97 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F   97 (670)
                      ++++|+|++|.++..+   |.+.|+|.+.++|+|+||++.     .+++|||+|++||+|||+.++     +++||+|+|
T Consensus         1 ~t~sF~f~~F~~~~~~---l~l~G~A~i~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~-----~~~sF~t~F   72 (237)
T d2d3sa1           1 KTISFNFNQFHQNEEQ---LKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTG-----NVASFETRF   72 (237)
T ss_dssp             CEEEEEESSCCSSCTT---EEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTC-----CBCEEEEEE
T ss_pred             CeEEEEeCCCCCCCCC---EEEeeeeEeCCCCeEEcCCCCCCCcccccEEEEEeCCCEEeecCCCC-----ceeeEEEEE
Confidence            4689999999865556   999999999878899999854     479999999999999999998     899999999


Q ss_pred             EEEEecCC-CCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           98 VFQIVTPN-SGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        98 ~f~i~~~~-~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      +|.|..+. ...+||||||+|+|... +.+..|++||+++..    ..+++|||||||++| .  +||++||||||+|++
T Consensus        73 ~f~i~~~~~~~~g~dGlaFvl~p~~~-~~~~~gg~lG~~~~~----~~~~~vaVEFDT~~n-~--~d~~~nHvgI~vns~  144 (237)
T d2d3sa1          73 SFSIRQPFPRPHPADGLVFFIAPPNT-QTGEGGGYFGIYNPL----SPYPFVAVEFDTFRN-T--WDPQIPHIGIDVNSV  144 (237)
T ss_dssp             EEECCCSCCSSCCCEEEEEEEECSSC-CCCBCGGGTTTBCTT----SCCCCEEEEEECSCC-T--TCCSSSEEEEEESSS
T ss_pred             EEEeecCCCCCCCCCeEEEEeCCCCc-cCCccccccccccCC----CcCceEEEEEEeecC-C--CCCCCCcEEEEcCCC
Confidence            99997653 34689999999998764 567789999998763    457899999999998 3  799999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .|.++.+           +.+.+|+.++|||+||+.+++|+|+|.+.+          +|..|+++..|||+.+|+++||
T Consensus       145 ~s~~~~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~----------~~~~~~ls~~vdL~~~l~~~vy  203 (237)
T d2d3sa1         145 ISTKTVP-----------FTLDNGGIANVVIKYDASTKILHVVLVFPS----------LGTIYTIADIVDLKQVLPESVN  203 (237)
T ss_dssp             SCSEEEE-----------CCCCTTCEEEEEEEEETTTTEEEEEEEETT----------TTEEEEEEEECCHHHHSCSEEE
T ss_pred             ccccccc-----------eeecCCCEEEEEEEEECCCCEEEEEEEcCC----------CCcccceeeEechHHhCCCcEE
Confidence            9876654           678899999999999999999999998754          4677899999999999999999


Q ss_pred             eeEeecCCc-------eeeeEEEeccccccCC
Q 035655          257 VGFSASTGR-------KVSSHFILGWSFSMNG  281 (670)
Q Consensus       257 vGFsastg~-------~~~~h~i~sW~fs~~~  281 (670)
                      ||||||||.       ..|.|+|++|+|+++.
T Consensus       204 vGFSasTG~~~~~~~~~~e~h~I~sWsFss~l  235 (237)
T d2d3sa1         204 VGFSAATGDPSGKQRNATETHDILSWSFSASL  235 (237)
T ss_dssp             EEEEEEECCGGGCCTTCCCCCEEEEEEEEEEC
T ss_pred             EEEEeECCCCccCccccceeeEEEEeEeEeeC
Confidence            999999994       5799999999999763

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1e-52  Score=424.55  Aligned_cols=227  Identities=31%  Similarity=0.539  Sum_probs=193.0

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      .+++|+|++|.+...+   |.+.|+|.+.++|.|+||++.      ..++|||+|++||+||++.++     +++||+|+
T Consensus         2 ~~~sF~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~-----~~~sf~t~   73 (251)
T d1g9fa_           2 ETVSFSWNKFVPKQPN---MILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETG-----SVASFAAS   73 (251)
T ss_dssp             EEEEEEESSCCC-CTT---EEEEETCBCCTTC-CBCSCBC---CBCTTCEEEEEESSCEECBCC-CC-----CBCEEEEE
T ss_pred             ceEEEEeCCCCCCCCC---EEEeeeEEECCCCEEEecCCcCCCcccCceEEEEEeCCCEEccCCCCc-----cceeeEEE
Confidence            4789999999875456   999999999878999999864      358999999999999999998     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      |+|.|...+...+||||||+|+|... +++..+|+||+++..   ...++.|||||||++|   .+||++||||||+|++
T Consensus        74 f~F~i~~~~~~~~gDGlAFvl~p~~~-~~~~~~g~lG~~~~~---~~~~~~vaVEFDT~~n---~~D~~~~Hvgi~~n~~  146 (251)
T d1g9fa_          74 FNFTFYAPDTKRLADGLAFFLAPIDT-KPQTHAGYLGLFNEN---ESGDQVVAVEFDTFRN---SWDPPNPHIGINVNSI  146 (251)
T ss_dssp             EEEEEECSCC--CCEEEEEEEEETTC-CCCCCGGGTTTCCTT---SCCCSCEEEEEECC-C---TTSCSSSEEEEEESSS
T ss_pred             EEEEEecCCCCCCCCceEEEEecCCC-CCCCccCccCccccc---CCCcceEEEEEecccC---CCCCCCCcEeEEecCc
Confidence            99999988788899999999999765 456788999998864   4457899999999998   3799999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .|..+..           +++.+|+.++|||+||+.+++|+|++...          .+|..|+++..|||+.+|+++||
T Consensus       147 ~s~~~~~-----------~~l~~g~~~~v~I~Yd~~~~~L~v~l~~~----------~~~~~~~l~~~vdL~~~l~~~~y  205 (251)
T d1g9fa_         147 RSIKTTS-----------WDLANNKVAKVLITYDASTSLLVASLVYP----------SQRTSNILSDVVDLKTSLPEWVR  205 (251)
T ss_dssp             SCSEEEE-----------CCCCTTCCEEEEEEEETTTTEEEEEEEEG----------GGTEEEEEEEECCC-CCSCSEEE
T ss_pred             ccccccc-----------eEecCCCEEEEEEEEECCccEEEEEEecC----------CCCcceeEEEEecchhhCCCcEE
Confidence            9876654           67889999999999999999999999753          35788999999999999999999


Q ss_pred             eeEeecCCcee--eeEEEeccccccCCCCCC
Q 035655          257 VGFSASTGRKV--SSHFILGWSFSMNGAAPS  285 (670)
Q Consensus       257 vGFsastg~~~--~~h~i~sW~fs~~~~~~~  285 (670)
                      ||||||||...  |.|+|++|+|+++.+++.
T Consensus       206 vGFSAsTG~~~~~~~h~I~sWsF~s~~~~~~  236 (251)
T d1g9fa_         206 IGFSAATGLDIPGESHDVLSWSFASNLPHAS  236 (251)
T ss_dssp             EEEEEEECSSSCCCEEEEEEEEEEEEECC--
T ss_pred             EEEEeecCCCCCCceeEEEEeEeECCCCCCC
Confidence            99999999754  899999999998765543

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

Probab=100.00  E-value=3.1e-52  Score=416.65  Aligned_cols=221  Identities=35%  Similarity=0.567  Sum_probs=192.7

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      +++||+|++|..+..+   |.++|+|.+.++|.|+||+..      .+++|||+|++||+||++.++     +++||+|+
T Consensus         1 ~~~SF~f~~F~~~~~~---l~l~G~A~~~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~-----~~~sFsT~   72 (234)
T d1f9ka_           1 ETQSFNFDHFEENSKE---LNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTG-----NVASFETR   72 (234)
T ss_dssp             CEEEEEESSCCSSCTT---EEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTC-----CBCEEEEE
T ss_pred             CceEEEeCCCCCCCCC---EEEeeeEEEcCCCEEEeecCCCCCCcccceeEEEEeCCCEEeeCCCCC-----cCcceEEE
Confidence            3689999999864456   999999999878999999864      358899999999999999988     89999999


Q ss_pred             EEEEEecCCC-CCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCC
Q 035655           97 FVFQIVTPNS-GQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNS  175 (670)
Q Consensus        97 F~f~i~~~~~-~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns  175 (670)
                      |+|.|.+++. ..+||||||+|+|... |.+..|+++|+++..    ..++.|||||||++| .  +||++||||||+|+
T Consensus        73 F~f~i~~~~~~~~g~dG~aF~i~p~~~-~~~~~g~~~g~~~~~----~~~~~vaVEFDT~~n-~--~Dp~~nHvgi~~ns  144 (234)
T d1f9ka_          73 FSFNITQPYAYPEPADGLTFFMVPPNS-PQGEDGGNLGVFKPP----EGDNAFAVEFDTFQN-T--WDPQVPHIGIDVNS  144 (234)
T ss_dssp             EEEEEECCCSSSCCCEEEEEEEECTTC-CCCCSGGGTTTCCSS----CCSCCEEEEEECSCC-T--TCCSSSEEEEEESS
T ss_pred             EEEEEECCCCCCCccceEEEEECCCCC-CcccccccccccCCC----CccceEEEEEecccc-C--CCCCCCcEeEecCC
Confidence            9999987643 4578999999998764 677899999998763    456789999999998 3  79999999999999


Q ss_pred             cccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccccc--c
Q 035655          176 MKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQ--E  253 (670)
Q Consensus       176 ~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~--~  253 (670)
                      +.|.++.+           +++.+|+.++|||+||+.+++|+|++++.+          +|..|+|++.|||+++|+  |
T Consensus       145 ~~s~~~~~-----------~~l~~G~~~~v~I~Yd~~~~~l~V~l~~~~----------~~~~~~ls~~idL~~~l~~~~  203 (234)
T d1f9ka_         145 IVSSKTLH-----------FQLENGGVANVVIKYDSPTKILNVVLAFHS----------VGTVYTLSNIVDLKQEFPNSE  203 (234)
T ss_dssp             SSCSEEEE-----------CCCCTTCCEEEEEEEETTTTEEEEEEEETT----------TTEEEEEEEECCHHHHSTTCS
T ss_pred             cccccccc-----------ccccCCCEEEEEEEEcCCCcEEEEEEEeCC----------CCccceEEEEEcHHHhcCCCC
Confidence            98876654           678899999999999999999999998754          456789999999999997  6


Q ss_pred             cceeeEeecCCc---eeeeEEEeccccccC
Q 035655          254 TMYVGFSASTGR---KVSSHFILGWSFSMN  280 (670)
Q Consensus       254 ~~~vGFsastg~---~~~~h~i~sW~fs~~  280 (670)
                      +||||||||||.   ..|.|+|++|+|+++
T Consensus       204 ~v~vGFSasTG~~~~~~~~h~I~sWsF~s~  233 (234)
T d1f9ka_         204 WVNVGLSATTGYQKNAVETHEIISWSFTSS  233 (234)
T ss_dssp             EEEEEEEEEECSSTTCCCEEEEEEEEEEEE
T ss_pred             EEEEEEEeecCCCCCceeeeEEEEEEeEEe
Confidence            699999999994   578999999999874

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

Probab=100.00  E-value=3.7e-51  Score=411.72  Aligned_cols=228  Identities=31%  Similarity=0.514  Sum_probs=199.9

Q ss_pred             CCceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC-----CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           22 QQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA-----HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        22 ~~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      +++++|+|++|.+...+   |.++|+|.+.++|.||||++.     .+++|||+|++||+||++.++     +++||+|+
T Consensus         1 ~~~~sF~f~~F~~~~~~---l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~-----~~~sFst~   72 (239)
T d1dbna_           1 SDELSFTINNFVPNEAD---LLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTG-----SVASFSTS   72 (239)
T ss_dssp             CCEEEEEESSCCTTCTT---EEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTC-----CBCEEEEE
T ss_pred             CCceEEEeCCCCCCCCC---EEEeeeeEECCCCEEEccCCCCCCcccceeEEEeecCCEEccCCCCc-----cceEEEEE
Confidence            35799999999875456   999999999888999999764     467899999999999999988     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCC-CCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCC--CCCCCCeeEEec
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPS-FPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNET--SDSQGNHVGINV  173 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~-~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~--~Dp~~~Hvgidv  173 (670)
                      |+|.|.++....+||||||+|+|.+. .+.++.|++||+++..+ +++.++.+||||||++| .++  +||+.+|||||+
T Consensus        73 F~F~i~~~~~~~~gdG~AF~l~~~~~~~~~~~~g~~lGl~~~~~-~~~~~~~~aVEfDT~~n-~~~~~~d~~~~hvgid~  150 (239)
T d1dbna_          73 FTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN-SDSSNQIVAVEFDTYFA-HSYDPWDPNYRHIGIDV  150 (239)
T ss_dssp             EEEECCCSSTTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSC-CCTTSCCEEEEEECCCC-TTTCTTSCSSCEEEEEE
T ss_pred             EEEEEECCCCCCCCCCEEEEEeCCCccCCcccCccccccccccC-CCcccCeeeeEEeeeec-CCCCCCCCCCceeeEEc
Confidence            99999988777899999999998775 56778899999998654 45678999999999998 654  489999999999


Q ss_pred             CCcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccc
Q 035655          174 NSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQE  253 (670)
Q Consensus       174 ns~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~  253 (670)
                      |++.|..+.+           ..+.+|+.++|||+||+.+++|.|++....          +|..|.|+..+||+++|++
T Consensus       151 n~~~s~~~~~-----------~~~~~g~~~~~~i~y~~~~~~l~v~l~~~~----------~~~~~~ls~~vdL~~~l~~  209 (239)
T d1dbna_         151 NGIESIKTVQ-----------WDWINGGVAFATITYLAPNKTLIASLVYPS----------NQTTFSVAASVDLKEILPE  209 (239)
T ss_dssp             SSSSCSEEEE-----------CCCCTTCCEEEEEEEEGGGTEEEEEEEETT----------TTEEEEEEEECCHHHHSCS
T ss_pred             CCcccccccc-----------ceEeCCceeEEEEEEcCCCCEEEEEEEecC----------CCccEEEEEecchHHhcCC
Confidence            9999877655           345689999999999999999999997643          5677899999999999999


Q ss_pred             cceeeEeecCCce--eeeEEEeccccccC
Q 035655          254 TMYVGFSASTGRK--VSSHFILGWSFSMN  280 (670)
Q Consensus       254 ~~~vGFsastg~~--~~~h~i~sW~fs~~  280 (670)
                      +||||||||||..  .|.|+|++|+|+++
T Consensus       210 ~vyvGFSAsTG~~~~~~~H~I~sWsFss~  238 (239)
T d1dbna_         210 WVRVGFSAATGYPTEVETHDVLSWSFTST  238 (239)
T ss_dssp             EEEEEEEEEECSGGGCCCCEEEEEEEEEE
T ss_pred             cEEEEEEEeCCCCCCcceeEEEEEEeEEe
Confidence            9999999999964  58899999999874

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=3.7e-51  Score=408.78  Aligned_cols=221  Identities=34%  Similarity=0.581  Sum_probs=196.2

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      ++++|+|++|+.  .+   +.+.|+|.+.++|.||||+..      ..++|||+|++||+||++.++     .++||+|+
T Consensus         2 ~~~sF~f~~F~~--~n---l~l~GdA~i~~~g~l~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~-----~~~sF~t~   71 (233)
T d1g8wa_           2 NDIYFNFQRFNE--TN---LILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTG-----TVASFATS   71 (233)
T ss_dssp             EEEEEEESSCCG--GG---EEEEETCEECTTSCEECSCCCSTTCCCTTCEEEEEESSCEECBCTTTC-----CBEEEEEE
T ss_pred             CceEEECCCCCc--Cc---EEEeccEEECCCCEEEecCCCCCCCcccceeEEEEcCCCeEeecCCCC-----ceeeEEEE
Confidence            479999999987  67   999999999888999999754      358999999999999999988     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      |+|.|.+++...+||||||+|+|.+. +.++.|++||+++..   +..++.|||||||++| .+ +||+++|||||+|++
T Consensus        72 f~f~i~~~~~~~~gDGlAF~l~~~~~-~~g~~g~~lG~~~g~---~~~~~~vaVEFDT~~N-~~-~d~~~~Hvgi~~n~~  145 (233)
T d1g8wa_          72 FTFNIQVPNNAGPADGLAFALVPVGS-QPKDKGGFLGLFDGS---NSNFHTVAVEFDTLYN-KD-WDPTERHIGIDVNSI  145 (233)
T ss_dssp             EEEECCCCSSCBCCEEEEEEEEETTC-CCCCCGGGTTTCCSS---CCCCCCEEEEEECSCC-TT-TCCSSCEEEEEESSS
T ss_pred             EEEEEecCCCCCCCCeEEEEEecCCC-CCCcccccCCccccC---CCcccEEEEEeecccC-CC-CCCCCCeEEEECCCc
Confidence            99999988777889999999999875 456789999998764   3457899999999999 55 699999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .+..+.+           .++.+|+.++|||+||+.+++|.|++.+.+          +|..|+++..+||+++||++||
T Consensus       146 ~s~~~~~-----------~~~~~g~~~~~~I~yd~~~~~l~v~l~~~~----------~~~~~~l~~~vdL~~~l~~~~y  204 (233)
T d1g8wa_         146 RSIKTTR-----------WDFVNGENAEVLITYDSSTNLLVASLVYPS----------QKTSFIVSDTVDLKSVLPEWVS  204 (233)
T ss_dssp             SCSEEEE-----------CCCCTTCCEEEEEEEETTTTEEEEEEEETT----------TTEEEEEEEECCHHHHSCSEEE
T ss_pred             ceeeecc-----------ccccCCcEEEEEEEEeCCCcEEEEEEEeCC----------CCCcEEEEEEechhHcCCCcEE
Confidence            8876654           567899999999999999999999997643          4677899999999999999999


Q ss_pred             eeEeecCC---ceeeeEEEeccccccC
Q 035655          257 VGFSASTG---RKVSSHFILGWSFSMN  280 (670)
Q Consensus       257 vGFsastg---~~~~~h~i~sW~fs~~  280 (670)
                      ||||||||   ...|.|+|++|+|+++
T Consensus       205 vGFSAsTG~~~~~~~~h~I~sWsFss~  231 (233)
T d1g8wa_         205 VGFSATTGINKGNVETNDVLSWSFASK  231 (233)
T ss_dssp             EEEEEEECSSTTBCCCCEEEEEEEEEE
T ss_pred             EEEEEEcCCCCCCceeeEEEEEEEEEE
Confidence            99999999   4668899999999975

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

Probab=100.00  E-value=9.3e-51  Score=406.37  Aligned_cols=226  Identities=27%  Similarity=0.435  Sum_probs=192.8

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC-CCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA-HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQI  101 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~-~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i  101 (670)
                      ++++|+|++|.+.+.+   |.++|+|.+.++|.||||++. .+++|||+|++||+||++.++     +++||+|+|+|.|
T Consensus         2 ~~~sF~~~~F~~~~~~---l~l~GdA~i~~~g~l~LT~~~~~~~~G~a~y~~Pi~l~~~~~~-----~~~sf~t~f~f~i   73 (232)
T d1v6ia_           2 ETVSFNFNSFSEGNPA---INFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATG-----NVASFLTSFSFEM   73 (232)
T ss_dssp             EEEEEEESSCCTTCTT---EEEEESCEECTTSCEECSCTTSTTCEEEEEESSCEECBCTTTC-----CBCEEEEEEEEEE
T ss_pred             ccEEEECCCCCCCCCC---EEEeeeeEEcCCCEEEeCCCCCCCceEEEEcCCCEEccCCCCC-----ccceeEEEEEEEe
Confidence            4799999999885455   999999998878999999865 489999999999999999998     8999999999999


Q ss_pred             ecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcccccc
Q 035655          102 VTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKL  181 (670)
Q Consensus       102 ~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~  181 (670)
                      .+.+...+||||||+|+|.+..+++  +++.|++....+.++.++.|||||||++| .+.+||+++|||||+|++.+...
T Consensus        74 ~~~~~~~~gDG~AF~l~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~aVEfDT~~n-~~~~d~~~~Higid~n~~~s~~~  150 (232)
T d1v6ia_          74 KDIKDYDPADGIIFFIAPEDTQIPA--GSIGGGTLGVSDTKGAGHFVGVEFDTYSN-SEYNDPPTDHVGIDVNSVDSVKT  150 (232)
T ss_dssp             ECCSSSBCCCEEEEEEEETTCCCCT--TCCCGGGTTTSCTTSEEEEEEEEEECSCC-GGGTCCSSCEEEEEEEESSCSEE
T ss_pred             ccCCCCCCCCeEEEEEECCCCCCCC--CccCCcccccccCCCCCceEEEEEEeEec-CCCCCCCCccEeEeeCCcccccc
Confidence            9887788999999999998753222  22223333333345678999999999999 78889999999999999988765


Q ss_pred             cccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEee
Q 035655          182 EPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSA  261 (670)
Q Consensus       182 ~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsa  261 (670)
                      .+           .++.+|+.++|||+||+.+++|+|++..           .++..|.++..|||+.+|+++|||||||
T Consensus       151 ~~-----------~~~~~g~~~~v~I~Yd~~~~~L~V~~~~-----------~~~~~~~l~~~vdL~~~l~~~vyvGFSA  208 (232)
T d1v6ia_         151 VP-----------WNSVSGAVVKVTVIYDSSTKTLSVAVTN-----------DNGDITTIAQVVDLKAKLPERVKFGFSA  208 (232)
T ss_dssp             EE-----------CCCCTTCEEEEEEEEETTTTEEEEEEEC-----------TTSCEEEEEEECCHHHHSCSEEEEEEEE
T ss_pred             cc-----------cccCCCCEEEEEEEEeCCceEEEEEEec-----------CCCCcceEEEEEchhhccCCcEEEEEEE
Confidence            43           5678999999999999999999999875           3456788999999999999999999999


Q ss_pred             cCCc-eeeeEEEeccccccCC
Q 035655          262 STGR-KVSSHFILGWSFSMNG  281 (670)
Q Consensus       262 stg~-~~~~h~i~sW~fs~~~  281 (670)
                      |||. ..|.|+|++|+|+++.
T Consensus       209 sTG~~~~~~H~I~sWsFss~l  229 (232)
T d1v6ia_         209 SGSLGGRQIHLIRSWSFTSTL  229 (232)
T ss_dssp             ECCSSBCCEEEEEEEEEEEEE
T ss_pred             ECCCCCCcccEEEEeEeEEee
Confidence            9996 4699999999999763

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

Probab=100.00  E-value=6.9e-51  Score=412.38  Aligned_cols=222  Identities=31%  Similarity=0.540  Sum_probs=196.4

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      +..||+|++|+.  .+   |.++|+|.+. ++.|+||++.      ..++|||+|++||+||++.++     +++||+|+
T Consensus         2 ~~~sF~f~~F~~--~~---l~l~GdA~~~-~~~l~LT~~~~~~~~~~~~~G~a~y~~pv~l~~~~~~-----~~~sF~t~   70 (253)
T d1g7ya_           2 DIQSFSFKNFNS--SS---FILQGDATVS-SSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTG-----AVASWATS   70 (253)
T ss_dssp             EEEEEEESSCCS--SC---EEEEETCEEE-TTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTC-----CBCEEEEE
T ss_pred             cccEEecCCCCc--cc---EEEEeeeEEc-CCEEEeCCCCCCCCcccceeEEEEeCCCeEeecCCCC-----ceeeEEEE
Confidence            468999999987  67   9999999996 8889999754      358899999999999999998     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      |+|+|.+++...+||||||+|+|.+.. .+..+|+||+++..+. ...++.+||||||++| .+ +||+++|||||+|++
T Consensus        71 F~F~i~~~~~~~ggDGlAF~l~~~~~~-~~~~~g~lgl~~~~~~-~~~~~~vaVEFDT~~n-~~-~d~~~~Hvgi~~ns~  146 (253)
T d1g7ya_          71 FTANIFAPNKSSSADGIAFALVPVGSE-PKSNSGFLGVFDSDVY-DNSAQTVAVEFDTFSN-TD-WDPTSRHIGIDVNSI  146 (253)
T ss_dssp             EEEECCCSSGGGCCCEEEEEEEETTCC-CCCCGGGTTTCSCSSC-CGGGCCEEEEEECSCC-TT-TCCSSCEEEEEESSS
T ss_pred             EEEEEecCCCCCCCCceEEEEeCCCCC-CCCCcccccccccCCC-CCcCceEEEEEeceec-CC-CCCCCCcEEEeeCCc
Confidence            999998877677999999999998764 4567899999987554 4567899999999999 56 699999999999999


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .|..+++           ..+.+|+.++|||+||+.+++|+|++...          .+|..|++++.+||+.+||++||
T Consensus       147 ~s~~~~~-----------~~~~~g~~~~v~I~Yd~~~~~L~v~l~~~----------~~~~~~~ls~~vdL~~~l~~~~y  205 (253)
T d1g7ya_         147 KSIRTAS-----------WGLANGQNAEILITYNAATSLLVASLVHP----------SRRTSYIVSERVDITNELPEYVS  205 (253)
T ss_dssp             SCSEEEE-----------CCCCTTSEEEEEEEEETTTTEEEEEEEET----------TTTEEEEEEEECCHHHHSCSEEE
T ss_pred             ccccccC-----------CCccCCCEEEEEEEEeCCcEEEEEEEecC----------CCCCceEEEEEechhhcCCCcEE
Confidence            9887765           56789999999999999999999999753          36788999999999999999999


Q ss_pred             eeEeecCC---ceeeeEEEeccccccC
Q 035655          257 VGFSASTG---RKVSSHFILGWSFSMN  280 (670)
Q Consensus       257 vGFsastg---~~~~~h~i~sW~fs~~  280 (670)
                      ||||||||   ...|.|+|++|+|+++
T Consensus       206 vGFSAsTG~~~~~~~~H~IlsWsF~s~  232 (253)
T d1g7ya_         206 IGFSATTGLSEGYTETHDVLSWSFASK  232 (253)
T ss_dssp             EEEEEECCSSSSCCCCCEEEEEEEEEE
T ss_pred             EEEEeEcCCCCCcccccEEEEEEeEEe
Confidence            99999999   4679999999999875

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

Probab=100.00  E-value=2.2e-50  Score=405.72  Aligned_cols=226  Identities=30%  Similarity=0.519  Sum_probs=197.6

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC-----CCeEEEEEecCceeeecCCCCCCCCCCccceeEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA-----HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCF   97 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F   97 (670)
                      .++||+|++|.++..+   +.++|+|.+.++|.||||++.     .+++|||+|++||+||++.++     +++||+|+|
T Consensus         2 ~~~sF~f~~F~~~~~~---l~l~G~A~v~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~-----~~~sF~t~F   73 (237)
T d1fnya_           2 GSLSFSFPKFAPNQPY---LINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTG-----NVASFVTSF   73 (237)
T ss_dssp             EEEEEEESSCCTTCTT---EEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTC-----CBCEEEEEE
T ss_pred             ceEEEEeCCCCCCCCC---eEEcccEEEcCCCEEECCCCCCCCcccccEEEEEeCCCeEcccCCCC-----cceeeEEEE
Confidence            4689999999875456   999999999878999999863     468999999999999999998     899999999


Q ss_pred             EEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcc
Q 035655           98 VFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMK  177 (670)
Q Consensus        98 ~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~  177 (670)
                      +|.|..++...+||||||+|+|.+. +.+..||+||+++..+ .+..++.+||||||++| .+ +||+++|||||+|++.
T Consensus        74 ~F~i~~~~~~~~gDG~AF~l~~~~~-~~~~~gg~lg~~~~~~-~~~~~~~~aVefDT~~n-~~-~d~~~~Higi~~n~~~  149 (237)
T d1fnya_          74 TFIIQAPNPATTADGLAFFLAPVDT-QPLDLGGMLGIFKDGY-FNKSNQIVAVEFDTFSN-GD-WDPKGRHLGINVNSIE  149 (237)
T ss_dssp             EEECCCSSTTSCCEEEEEEEEETTC-CCCCCGGGTTTCC----CCTTSCCEEEEEECSCC-TT-TCCSSSEEEEEESSSS
T ss_pred             EEEEecCCCCCCCCeeEEEEcCCCC-CcccccCcccccCCCC-ccCccceEEEEeccccc-cC-CCCCCceEEEecCCCc
Confidence            9999988777899999999999775 4467889999997643 34678899999999999 55 6999999999999999


Q ss_pred             cccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccccccccee
Q 035655          178 SIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYV  257 (670)
Q Consensus       178 s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~v  257 (670)
                      |..+.+           ..+.+|+.++|||+||+.+++|.|++.+.+          +|..|+++..+||+.+||++|||
T Consensus       150 s~~~~~-----------~~~~~g~~~~v~I~Y~~~~~~l~v~l~~~~----------~~~~~~l~~~vdL~~~l~~~~yv  208 (237)
T d1fnya_         150 SIKTVP-----------WNWTNGEVANVFISYEASTKSLTASLVYPS----------LETSFIIDAIVDVKIVLPEWVRF  208 (237)
T ss_dssp             CSEEEE-----------CCCCTTCCEEEEEEEEGGGTEEEEEEEETT----------TTEEEEEEEECCHHHHSCSEEEE
T ss_pred             cccccc-----------ccccCCcEEEEEEEEeCCccEEEEEEEeCC----------CCcceeEEEEechhhcCCCcEEE
Confidence            877654           566799999999999999999999998654          46778999999999999999999


Q ss_pred             eEeecCC---ceeeeEEEeccccccCC
Q 035655          258 GFSASTG---RKVSSHFILGWSFSMNG  281 (670)
Q Consensus       258 GFsastg---~~~~~h~i~sW~fs~~~  281 (670)
                      |||||||   ...|.|+|++|+|+++.
T Consensus       209 GFSAsTG~~s~~~e~H~I~sWsF~s~l  235 (237)
T d1fnya_         209 GFSATTGIDKGYVQTNDVLSWSFESNL  235 (237)
T ss_dssp             EEEEEECSSTTCCCCCEEEEEEEEEEE
T ss_pred             EEEEECCCCCCcccccEEEEeEeEEeC
Confidence            9999999   56789999999999863

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

Probab=100.00  E-value=4.1e-50  Score=401.97  Aligned_cols=222  Identities=29%  Similarity=0.513  Sum_probs=194.5

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCC-----CeEEEEEecCceeeecCCCCCCCCCCccceeEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH-----NVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCF   97 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~-----~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F   97 (670)
                      ++++|+|++|.+...+   |.+.|+|.+.++|.||||++..     +++|||+|++||+||+..       .++||+|+|
T Consensus         2 ~~~sF~f~~F~~~~~~---l~l~G~A~i~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pv~l~~~~-------~~~sF~t~f   71 (233)
T d1n47a_           2 ESTSFSFTNFNPNQNN---LILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNT-------TLASFTTSF   71 (233)
T ss_dssp             EEEEEEESSCCTTCTT---EEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSS-------CBCEEEEEE
T ss_pred             CceEEEeCCCCCCCCC---eEEecceEECCCCEEEecCCCCCCcCCCceEEEEeCCCEEccCCC-------eeeeEEEEE
Confidence            5789999999865456   9999999998788999998653     689999999999999854       479999999


Q ss_pred             EEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcc
Q 035655           98 VFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMK  177 (670)
Q Consensus        98 ~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~  177 (670)
                      +|.|.+.+...+||||||+|+|.+. +.+..||+||+++..+. +..++.|||||||++| .  +||++||||||+|++.
T Consensus        72 ~f~i~~~~~~~~gDGlAF~l~~~~~-~~~~~gg~lGl~~~~~~-~~~~~~~aVefDT~~n-~--~d~~~~higi~~n~~~  146 (233)
T d1n47a_          72 SFVMAAPAAAAVADGLAFFLAPPDT-QPQARGGFLGLFADRAH-DASYQTVAVEFDTYSN-A--WDPNYTHIGIDTNGIE  146 (233)
T ss_dssp             EEECCCSSTTSCCEEEEEEEECTTC-CCCCCGGGTTTCSSSSC-CGGGCCEEEEEECSCC-T--TSCSSCEEEEEESSSS
T ss_pred             EEEEeCCCCCCCCCceEEEECCCCC-CCCCCCCccccccccCC-CCcCceEEEEEEeeec-C--CCCCCCceeEccCCcc
Confidence            9999988777899999999999765 45678899999976554 4668899999999988 3  7999999999999998


Q ss_pred             cccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccccccccee
Q 035655          178 SIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYV  257 (670)
Q Consensus       178 s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~v  257 (670)
                      +..+.+           +.+.+|+.++|||+||+.+++|.|++...          .+|..|.|+..+||+++||++|||
T Consensus       147 s~~~~~-----------~~l~~g~~~~v~I~Y~~~~~~l~v~l~~~----------~~~~~~~ls~~vdL~~~l~~~vyv  205 (233)
T d1n47a_         147 SKKTTP-----------FDMVYGEKANIVITYQASTKALAASLVFP----------VSQTSYAVSARVDLRDILPEYVRV  205 (233)
T ss_dssp             CSEEEE-----------CCCCTTSCEEEEEEEETTTTEEEEEEEET----------TTTEEEEEEEECCGGGTSCSEEEE
T ss_pred             cccccc-----------ceecCCCEEEEEEEEcCCCeEEEEEEEeC----------CCCccEEEEEEechHHhcCCcEEE
Confidence            877654           57789999999999999999999999754          357788999999999999999999


Q ss_pred             eEeecCC---ceeeeEEEeccccccC
Q 035655          258 GFSASTG---RKVSSHFILGWSFSMN  280 (670)
Q Consensus       258 GFsastg---~~~~~h~i~sW~fs~~  280 (670)
                      |||||||   ...|.|+|++|+|+++
T Consensus       206 GFSAsTG~~~~~~~~H~I~sWsFss~  231 (233)
T d1n47a_         206 GFSATTGLNAGVVETHDIVSWSFAVS  231 (233)
T ss_dssp             EEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             EEEEecCCCCCcccccEEEEEEeEEE
Confidence            9999999   4678999999999975

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

Probab=100.00  E-value=9.5e-49  Score=394.70  Aligned_cols=226  Identities=25%  Similarity=0.487  Sum_probs=197.0

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      +++||+|++|++...+   |.+.|+|.+. ++.|+||++.      ..++|||+|++||+||++.++     +++||+|+
T Consensus         2 ~~~sF~f~~F~~~~~~---l~l~G~A~i~-~~~i~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~-----~~~sF~t~   72 (241)
T d1ukga_           2 DSLSFGFPTFPSDQKN---LIFQGDAQIK-NNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKSSS-----RVANFQSQ   72 (241)
T ss_dssp             CEEEEEESSCCSCCSS---EEEEETCEEE-TTEEECSCBCTTSCBCSSEEEEEEESSCEECEETTTT-----EEEEEEEE
T ss_pred             ccEEEEeCCCCCCCCC---EEEeeeEEEe-CCEEEeCCCCCCCCccccceEEEEeCCCeecccCCCC-----ceeeeEEE
Confidence            5799999999875556   9999999997 8899999864      479999999999999999988     89999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCC-CCCCCCCCcccccccCCCC-CCCCCcEEEEEeeecCCCCCC--CCCCCCeeEEe
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQP-SFPGGKAEHYLGILNSTND-HKPSNHLFAIEFDTVNGYNET--SDSQGNHVGIN  172 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~-~~~~~~~g~~lGl~~~~~~-~~~~~~~vaVEFDt~~n~~~~--~Dp~~~Hvgid  172 (670)
                      |+|+|..+. ..+|||||||+.|.. ..|.+..|+++|+++.... +.+.|+.|||||||++| .+.  +||++||||||
T Consensus        73 F~f~i~~~~-~~~~~g~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~n~~vaVEfDt~~n-~~~~~~~~~~~Higid  150 (241)
T d1ukga_          73 FSFSLKSPL-SNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTFYA-QDSNTWDPNYPHIGID  150 (241)
T ss_dssp             EEEEEECSS-SSCCCEEEEEEECTTCCCCTTCCGGGTTTSCGGGTTCGGGCCCEEEEEECCCC-TTTCTTSCSSCEEEEE
T ss_pred             EEEEEecCC-CCCCCceEEEEeCCCCCcccccCcccccccccccccCCccCcccceeccCEec-CccCCCCCCCccEeee
Confidence            999998764 467999999998765 4577888999999876543 35678999999999988 543  46899999999


Q ss_pred             cCCcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCccccc
Q 035655          173 VNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQ  252 (670)
Q Consensus       173 vns~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~  252 (670)
                      +|++.|.++.+           ..+.+|+.++|||+||+.+++|+|++...           +|..|.+++.|||+++|+
T Consensus       151 ~n~~~s~~~~~-----------~~~~~g~~~~v~I~Yd~~~~~L~v~~~~~-----------~~~~~~l~~~vdL~~~l~  208 (241)
T d1ukga_         151 VNSIRSVKTVK-----------WDRRDGQSLNVLVTFNPSTRNLDVVATYS-----------DGTRYEVSYEVDVRSVLP  208 (241)
T ss_dssp             ESSSSCSEEEE-----------CCCCTTCCEEEEEEEETTTTEEEEEEEET-----------TCCEEEEEEECCGGGTSC
T ss_pred             cCCcccccccc-----------cccCCCcEEEEEEEEeCCCcEEEEEEccC-----------CCCceEEEEEEehHHhCC
Confidence            99999876654           56789999999999999999999999763           456788999999999999


Q ss_pred             ccceeeEeecCCceeeeEEEeccccccCC
Q 035655          253 ETMYVGFSASTGRKVSSHFILGWSFSMNG  281 (670)
Q Consensus       253 ~~~~vGFsastg~~~~~h~i~sW~fs~~~  281 (670)
                      ++||||||||||...|.|+|++|+|+++.
T Consensus       209 ~~~yvGFSAsTG~~~~~H~IlsWsFss~l  237 (241)
T d1ukga_         209 EWVRVGFSAASGEQYQTHTLESWSFTSTL  237 (241)
T ss_dssp             SEEEEEEEEEESSSCCEEEEEEEEEEEEE
T ss_pred             CcEEEEEEEecCCCCceeEEEEeEEEEEe
Confidence            99999999999999999999999999763

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.8e-49  Score=413.37  Aligned_cols=249  Identities=27%  Similarity=0.498  Sum_probs=193.1

Q ss_pred             ccchhhHHHhhcC---------ccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccc
Q 035655          351 RFRYSDLYTATKG---------FKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLR  401 (670)
Q Consensus       351 ~~~~~~l~~~t~~---------f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~  401 (670)
                      .++|+|...++++         |+..++||+|+||+||+|.+..                    ..+.|.+|+++|++++
T Consensus         6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   85 (299)
T d1jpaa_           6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD   85 (299)
T ss_dssp             GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC
Confidence            3566666666544         4556899999999999997632                    2457999999999999


Q ss_pred             cCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          402 HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       402 H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                      |||||+++|+|.+++..++|||||++|+|.+++.... ..++|.++++++.|||+||.|||+   ++|+||||||+||||
T Consensus        86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl  161 (299)
T d1jpaa_          86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILV  161 (299)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred             CCCCccEEEEEeeCCEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEE
Confidence            9999999999999999999999999999999887643 369999999999999999999999   899999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCcce----eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-
Q 035655          482 DADMNARLGDFGLARLFDHGKISH----TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-  555 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-  555 (670)
                      +.++.+||+|||+++.........    .....||+.|||||.+.++.++.++|||||||++|||+| |+.||...... 
T Consensus       162 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~  241 (299)
T d1jpaa_         162 NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD  241 (299)
T ss_dssp             CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             CCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999998765433221    122468999999999999999999999999999999998 89999764321 


Q ss_pred             hHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          556 LVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       556 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +...+    ..+.         ....+....+.+.+++.+||+.||.+|||++||++.|+.
T Consensus       242 ~~~~i----~~~~---------~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~  289 (299)
T d1jpaa_         242 VINAI----EQDY---------RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK  289 (299)
T ss_dssp             HHHHH----HTTC---------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHH----HcCC---------CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            11111    1111         111222334668889999999999999999999999874

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-48  Score=398.66  Aligned_cols=245  Identities=28%  Similarity=0.449  Sum_probs=192.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|+..++||+|+||+||+|+...               ..+.|.+|+++|++++|||||+++|++.+ +.+++||||+
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~   85 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWC   85 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             cccEEEEEEEeeCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecC
Confidence            4578889999999999999997643               35789999999999999999999999865 5689999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc-c
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-S  504 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~-~  504 (670)
                      ++|+|.++|.... ..++|.+++.++.|||+||+|||+   ++|+||||||+||||+.++.+||+|||+|+....... .
T Consensus        86 ~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~  161 (276)
T d1uwha_          86 EGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH  161 (276)
T ss_dssp             CEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred             CCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence            9999999997653 369999999999999999999999   8999999999999999999999999999987654332 2


Q ss_pred             eeeccccCcCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          505 HTTNVVGTIGYIAPELART---GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      ......||+.|||||++.+   ..++.++|||||||++|||+||+.||........  .......+..    .|.+ ...
T Consensus       162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~--~~~~~~~~~~----~p~~-~~~  234 (276)
T d1uwha_         162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIFMVGRGYL----SPDL-SKV  234 (276)
T ss_dssp             ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--HHHHHHHTSC----CCCG-GGS
T ss_pred             cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH--HHHHHhcCCC----CCcc-hhc
Confidence            3345689999999999864   3589999999999999999999999976332211  1111111111    1111 111


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      +....+.+.+++.+||+.||.+|||++||+++|+..
T Consensus       235 ~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l  270 (276)
T d1uwha_         235 RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL  270 (276)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            222345678899999999999999999999999754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-49  Score=402.06  Aligned_cols=239  Identities=26%  Similarity=0.457  Sum_probs=187.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++|+..+.||+|+||+||+|.+.+              ..++|.+|++++++++||||++++|+|.+++..++||||+++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~   84 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH   84 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCC
Confidence            578889999999999999998643              357899999999999999999999999999999999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|.+++.... ..++|..++.++.|||+||.|||+   ++|+||||||+|||+++++.+||+|||+++...........
T Consensus        85 g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~  160 (263)
T d1sm2a_          85 GCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  160 (263)
T ss_dssp             CBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred             CcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence            99999987653 468999999999999999999999   89999999999999999999999999999877655444444


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhC-CCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATG-RRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG-~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ...||+.|||||++.+..++.++|||||||++|||+|+ +.|+.....  .+....... +.  ....|.       ...
T Consensus       161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~--~~~~~~i~~-~~--~~~~p~-------~~~  228 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDIST-GF--RLYKPR-------LAS  228 (263)
T ss_dssp             ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH--HHHHHHHHH-TC--CCCCCT-------TSC
T ss_pred             ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH--HHHHHHHHh-cC--CCCCcc-------ccC
Confidence            56899999999999999999999999999999999995 555543221  111111111 11  111121       223


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+++..||+.||.+|||++||+++|++
T Consensus       229 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~  258 (263)
T d1sm2a_         229 THVYQIMNHCWKERPEDRPAFSRLLRQLAE  258 (263)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            567889999999999999999999999974

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-48  Score=401.75  Aligned_cols=240  Identities=28%  Similarity=0.435  Sum_probs=198.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..++||+|+||+||+|.++.              ..++|.+|+++|++++|||||+++|+|.+ +..++||||++
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~   90 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME   90 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCC
Confidence            4578889999999999999998754              35679999999999999999999998865 56799999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +|+|.+++.......++|.++++++.||++||.|||+   ++|+||||||+||||++++.+||+|||+|+..........
T Consensus        91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~  167 (272)
T d1qpca_          91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR  167 (272)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCccccc
Confidence            9999999876665679999999999999999999998   8999999999999999999999999999998876554555


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ....||+.|||||++.++.++.++|||||||++|||+||..|+...... .+.. .....+     ..+..    +....
T Consensus       168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~-~~~~-~~i~~~-----~~~~~----p~~~~  236 (272)
T d1qpca_         168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVI-QNLERG-----YRMVR----PDNCP  236 (272)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHH-HHHHTT-----CCCCC----CTTCC
T ss_pred             cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH-HHHH-HHHHhc-----CCCCC----cccCh
Confidence            5668999999999999999999999999999999999976665432211 1111 111111     11111    11223


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      +.+.+++.+||+.||++|||++||++.|+
T Consensus       237 ~~l~~li~~cl~~~P~~Rpt~~ei~~~L~  265 (272)
T d1qpca_         237 EELYQLMRLCWKERPEDRPTFDYLRSVLE  265 (272)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            56788999999999999999999999886

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.8e-49  Score=408.47  Aligned_cols=243  Identities=26%  Similarity=0.381  Sum_probs=204.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|+..++||+|+||+||+|++..               ..++|.+|+++|++++|||||+++|+|.+++..++||||+
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~   95 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   95 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecc
Confidence            4678889999999999999998643               3578999999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++|+|.+++.+.....++|..++.++.||++||+|||+   ++|+||||||+||||++++.+||+|||+++.........
T Consensus        96 ~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~  172 (287)
T d1opja_          96 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  172 (287)
T ss_dssp             TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEE
T ss_pred             cCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecCCCCcee
Confidence            99999999987766789999999999999999999999   899999999999999999999999999999776655455


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      .....||+.|||||++.+..++.++|||||||++|||++|..|+...... .. .......+     ..+    ..+...
T Consensus       173 ~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~-~~-~~~~i~~~-----~~~----~~~~~~  241 (287)
T d1opja_         173 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQ-VYELLEKD-----YRM----ERPEGC  241 (287)
T ss_dssp             ETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HH-HHHHHHTT-----CCC----CCCTTC
T ss_pred             eccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH-HH-HHHHHhcC-----CCC----CCCccc
Confidence            55567899999999999999999999999999999999977776442211 11 11111111     111    122223


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...+.+++..||+.||.+|||++||++.|+..
T Consensus       242 ~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         242 PEKVYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            45688999999999999999999999988743

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-48  Score=396.19  Aligned_cols=241  Identities=22%  Similarity=0.290  Sum_probs=195.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..+.||+|+||+||+|+...                 ..+.+.+|+++|++++||||+++++++.+++..++|||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            3578999999999999999998643                 23458899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++|+|.++|..+  ..+++.++..++.||++||+|||+   ++|+||||||+|||+++++++||+|||+|+.......
T Consensus        84 y~~gg~L~~~l~~~--~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~  158 (271)
T d1nvra_          84 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  158 (271)
T ss_dssp             CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             ccCCCcHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCCc
Confidence            99999999999654  469999999999999999999998   8999999999999999999999999999997754432


Q ss_pred             -ceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          504 -SHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       504 -~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       ...+..+||+.|||||++.+..+ +.++|||||||++|||++|+.||............. .....         ....
T Consensus       159 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~-~~~~~---------~~~~  228 (271)
T d1nvra_         159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKT---------YLNP  228 (271)
T ss_dssp             ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH-HTTCT---------TSTT
T ss_pred             cccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH-hcCCC---------CCCc
Confidence             22345689999999999988776 578999999999999999999997643322221111 11110         0011


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .......+.+++.+||+.||.+|||++|+++|-+-
T Consensus       229 ~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf  263 (271)
T d1nvra_         229 WKKIDSAPLALLHKILVENPSARITIPDIKKDRWY  263 (271)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence            11223566788999999999999999999886443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-47  Score=389.11  Aligned_cols=231  Identities=24%  Similarity=0.382  Sum_probs=194.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|++.+.||+|+||+||+|+...                   ..+.+.+|++++++++||||+++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            468999999999999999998753                   2356789999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++.+.  ..+++.++..++.||++||+|||+   ++|+||||||+|||++.++.+||+|||+|+..... 
T Consensus        86 Ey~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~-  159 (263)
T d2j4za1          86 EYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-  159 (263)
T ss_dssp             ECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-
T ss_pred             eecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCCC-
Confidence            999999999999654  359999999999999999999999   89999999999999999999999999999865543 


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                        ......||+.|||||++.+..++.++|||||||++|||++|+.||........   .......+      +.+    +
T Consensus       160 --~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~~~i~~~~------~~~----p  224 (263)
T d2j4za1         160 --RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YKRISRVE------FTF----P  224 (263)
T ss_dssp             --CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHTTC------CCC----C
T ss_pred             --cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH---HHHHHcCC------CCC----C
Confidence              23456899999999999999999999999999999999999999976432211   11111111      111    1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+.+++.+||++||.+|||++|+++|
T Consensus       225 ~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         225 DFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             ccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence            1223567789999999999999999999974

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-47  Score=390.21  Aligned_cols=240  Identities=27%  Similarity=0.441  Sum_probs=202.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~  426 (670)
                      .++|+..++||+|+||+||+|+.++              ..++|.+|++++++++||||++++|+|.+++.+++||||++
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            3688999999999999999998753              35789999999999999999999999999999999999999


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCccee
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHT  506 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  506 (670)
                      +|+|.+++.... ..+++..+.+++.|+++||.|||+   ++|+||||||+|||+++++.+||+|||+++..........
T Consensus        83 ~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  158 (258)
T d1k2pa_          83 NGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS  158 (258)
T ss_dssp             TEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCC
T ss_pred             CCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCceee
Confidence            999999976554 368999999999999999999998   8999999999999999999999999999987766554445


Q ss_pred             eccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHH
Q 035655          507 TNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAE  585 (670)
Q Consensus       507 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  585 (670)
                      ....||+.|+|||++.+..++.|+|||||||++|||+| |+.||.........   .....+.  ....|       ...
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~---~~i~~~~--~~~~p-------~~~  226 (258)
T d1k2pa_         159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA---EHIAQGL--RLYRP-------HLA  226 (258)
T ss_dssp             CCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH---HHHHTTC--CCCCC-------TTC
T ss_pred             cccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHH---HHHHhCC--CCCCc-------ccc
Confidence            55689999999999999999999999999999999998 89999864322111   1111111  11112       122


Q ss_pred             HHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          586 MELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       586 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .+.+.+++..||+.||++|||++|++++|..
T Consensus       227 ~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         227 SEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             cHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            3567899999999999999999999999853

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-47  Score=403.62  Aligned_cols=241  Identities=24%  Similarity=0.387  Sum_probs=197.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~  417 (670)
                      .++|+..++||+|+||+||+|+...                      ....|.+|+.+|.++ +|||||+++++|.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            3578999999999999999997531                      235688999999998 89999999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCCc---------------------cccCHHHHHHHHHHHHHHhhhccccccceEEecccCC
Q 035655          418 LLLVYDYIPNGSLDSLLFDNEN---------------------FVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKS  476 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp  476 (670)
                      .++||||+++|+|.++|..+..                     ..++|..++.++.||++||+|||+   ++|+||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCch
Confidence            9999999999999999976432                     358999999999999999999999   8999999999


Q ss_pred             CcEEecCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcc
Q 035655          477 GNVLIDADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHF  554 (670)
Q Consensus       477 ~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~  554 (670)
                      +|||++.++.+||+|||+|+........ ......||+.|||||++.++.++.++|||||||++|||+| |+.||.....
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999999876554432 3345678999999999999999999999999999999998 8999976332


Q ss_pred             hhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          555 ILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       555 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ...  .......+.     .+    +.+....+.+.+++.+||+.||++|||++||+++|.
T Consensus       273 ~~~--~~~~~~~~~-----~~----~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         273 DAN--FYKLIQNGF-----KM----DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             SHH--HHHHHHTTC-----CC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHH--HHHHHhcCC-----CC----CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            111  111111111     11    112223456889999999999999999999999985

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-47  Score=393.58  Aligned_cols=242  Identities=26%  Similarity=0.468  Sum_probs=190.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      +..|+..++||+|+||.||+|.+..                     ...+|.+|+++|++++|||||+++|+|.+.+..+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            3568889999999999999997532                     2357899999999999999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||||+++|+|.+++.... ..++|.++++++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+++...
T Consensus        86 ~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~  161 (283)
T d1mqba_          86 IITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  161 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhccc
Confidence            9999999999999886554 469999999999999999999999   899999999999999999999999999998765


Q ss_pred             CCCcc--eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          500 HGKIS--HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       500 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      .....  ......||+.|||||++.++.++.++|||||||++|||++|..|+...... .+.. .....+         .
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-~~~~-~~i~~~---------~  230 (283)
T d1mqba_         162 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVM-KAINDG---------F  230 (283)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHH-HHHHTT---------C
T ss_pred             CCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-HHHH-HHHhcc---------C
Confidence            43322  223457899999999999999999999999999999999976665432211 1111 111111         1


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ....+...+..+.+++.+||+.||++||++.||++.|+..
T Consensus       231 ~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l  270 (283)
T d1mqba_         231 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  270 (283)
T ss_dssp             CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHH
Confidence            1122223346688999999999999999999999999754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-47  Score=394.59  Aligned_cols=237  Identities=24%  Similarity=0.371  Sum_probs=193.5

Q ss_pred             cCccccc-eEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSE-VIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~-~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ++|...+ +||+|+||.||+|.+..                   ..++|.+|+++|++++|||||+++|+|.. +.+++|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            4566666 49999999999996531                   34679999999999999999999999965 568999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++.... ..+++.++++++.|||+||+|||+   ++|+||||||+||||+.++.+||+|||+++.....
T Consensus        87 mE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  162 (285)
T ss_dssp             EECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             EEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhccccc
Confidence            99999999999986543 469999999999999999999999   89999999999999999999999999999987654


Q ss_pred             Ccc--eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          502 KIS--HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       502 ~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ...  ......||+.|||||++.++.++.++|||||||++|||+| |+.||......  +. ......+..     +.  
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~-~~~i~~~~~-----~~--  232 (285)
T d1u59a_         163 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EV-MAFIEQGKR-----ME--  232 (285)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HH-HHHHHTTCC-----CC--
T ss_pred             ccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HH-HHHHHcCCC-----CC--
Confidence            322  2234578999999999999999999999999999999998 99999864322  11 111112211     11  


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                        .+...+..+.+++.+||+.||++||++.+|++.|+
T Consensus       233 --~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~  267 (285)
T d1u59a_         233 --CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  267 (285)
T ss_dssp             --CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             --CCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence              12223356788999999999999999999999886

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-47  Score=389.63  Aligned_cols=239  Identities=25%  Similarity=0.380  Sum_probs=182.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec--cCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--KRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--~~~~~lV  421 (670)
                      ++|+..+.||+|+||+||+|+...                  ..+.|.+|+++|++++|||||++++++.+  .+.+++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            579999999999999999997643                  23568899999999999999999999864  4568999


Q ss_pred             EeccCCCCchhhcccC--CccccCHHHHHHHHHHHHHHhhhccccc--cceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          422 YDYIPNGSLDSLLFDN--ENFVLSWEQRFNIIKGIAAGLLYLHEEW--EQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~--~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      |||+++|+|.+++.+.  .+..+++.+++.++.||+.||.|||+..  ..+|+||||||+|||++.++.+||+|||+++.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            9999999999999653  2456999999999999999999999821  13499999999999999999999999999987


Q ss_pred             ccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCC
Q 035655          498 FDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNL  577 (670)
Q Consensus       498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l  577 (670)
                      ..... .......||+.|||||++.+..++.++|||||||++|||++|+.||........  . .....+..     +.+
T Consensus       164 ~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~--~-~~i~~~~~-----~~~  234 (269)
T d2java1         164 LNHDT-SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL--A-GKIREGKF-----RRI  234 (269)
T ss_dssp             C------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--H-HHHHHTCC-----CCC
T ss_pred             cccCC-CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHH--H-HHHHcCCC-----CCC
Confidence            65433 233456899999999999999999999999999999999999999986432211  1 11111111     111


Q ss_pred             CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          578 GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       578 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ...+    .+.+.+++.+||+.||.+|||++|+++|
T Consensus       235 ~~~~----s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         235 PYRY----SDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             Cccc----CHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            1222    3467889999999999999999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-47  Score=392.25  Aligned_cols=230  Identities=26%  Similarity=0.377  Sum_probs=187.7

Q ss_pred             ceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          368 EVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       368 ~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++||+|+||+||+|.+..                    ..++|.+|+++|++++|||||+++|+|.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            579999999999996431                    23578999999999999999999999965 467899999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce--
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH--  505 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~--  505 (670)
                      |+|.+++.+.  ..++|.++++++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+++.........  
T Consensus        92 g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~  166 (277)
T d1xbba_          92 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  166 (277)
T ss_dssp             EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred             CcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhcccccccccc
Confidence            9999999754  359999999999999999999998   899999999999999999999999999999775543322  


Q ss_pred             eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          506 TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      .....||+.|||||.+.+..++.++|||||||++|||+| |+.||........   ......+..     +.    .+..
T Consensus       167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~---~~~i~~~~~-----~~----~p~~  234 (277)
T d1xbba_         167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV---TAMLEKGER-----MG----CPAG  234 (277)
T ss_dssp             ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---HHHHHTTCC-----CC----CCTT
T ss_pred             ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHH---HHHHHcCCC-----CC----CCcc
Confidence            234579999999999999999999999999999999998 8999986432211   111111111     11    1222


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ....+.+++.+||+.||.+|||+++|++.|+
T Consensus       235 ~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~  265 (277)
T d1xbba_         235 CPREMYDLMNLCWTYDVENRPGFAAVELRLR  265 (277)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             cCHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            3356788999999999999999999998875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=389.58  Aligned_cols=236  Identities=23%  Similarity=0.370  Sum_probs=197.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      .++|+..++||+|+||+||+|+...                ..+.+.+|+++|++++|||||++++++.+.+..++||||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            3579999999999999999998643                345788999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +++|+|.+++.++   .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++++||+|||+++...... .
T Consensus        99 ~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~-~  171 (293)
T d1yhwa1          99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-S  171 (293)
T ss_dssp             CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-C
T ss_pred             cCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeecccc-c
Confidence            9999999987543   59999999999999999999998   899999999999999999999999999999775543 2


Q ss_pred             eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHH
Q 035655          505 HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVA  584 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  584 (670)
                      ......||+.|||||++.+..++.++|||||||++|||++|+.||.........  .......      .+.+  ..+..
T Consensus       172 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~~~~~~~------~~~~--~~~~~  241 (293)
T d1yhwa1         172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YLIATNG------TPEL--QNPEK  241 (293)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHHHHHC------SCCC--SSGGG
T ss_pred             cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHH--HHHHhCC------CCCC--CCccc
Confidence            334568999999999999999999999999999999999999999764322111  1111111      1111  11223


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          585 EMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       585 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+++.+||++||.+|||++|+++|
T Consensus       242 ~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         242 LSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            34567889999999999999999999875

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

Probab=100.00  E-value=4e-47  Score=379.40  Aligned_cols=216  Identities=31%  Similarity=0.505  Sum_probs=186.0

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCC------CeEEEEEecCceeeecCCCCCCCCCCccceeEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAH------NVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTC   96 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~   96 (670)
                      +.++|+|++|++. .+   |.+.|+|.+.++|.|+||++..      +++|||+|++||+||+.  +     +++||+|+
T Consensus         2 ~~~sF~f~~F~~~-~~---l~l~GdA~i~~~g~l~LT~~~~~~~~~~~s~G~a~y~~Pv~l~~~--~-----~~~sFst~   70 (228)
T d1ioaa_           2 TETSFNFPNFHTD-DK---LILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDS--N-----NVASFNTN   70 (228)
T ss_dssp             CCCEEEESSCCTT-SS---EEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBCS--S-----CBEEEEEE
T ss_pred             ccceEEcCCCCCC-Cc---EEEeeeeEEcCCCEEEecCCCCCCccccceeEEEEECCceEecCC--C-----ceeeEEEE
Confidence            4689999999762 34   9999999998789999998653      57899999999999974  4     68999999


Q ss_pred             EEEEEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCc
Q 035655           97 FVFQIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSM  176 (670)
Q Consensus        97 F~f~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~  176 (670)
                      |+|.|.+.+...+||||||+|+|.+. +.+..|++||+++.+. ++..++.|||||||++|   .+|++.+|||+++++.
T Consensus        71 F~f~i~~~~~~~~gDGlAF~l~~~~~-~~~~~g~~lgl~~~~~-~~~~~~~vave~dt~~n---~~~~~~~~~~~~~~~~  145 (228)
T d1ioaa_          71 FTFIIRAKNQSISAYGLAFALVPVNS-PPQKKQEFLGIFNTNN-PEPNARTVAVVFNTFKN---RIDFDKNFIKPYVNEN  145 (228)
T ss_dssp             EEEECCBSCTTSCCEEEEEEEEETTC-CCCCCGGGTTTCCCSS-CCGGGCCEEEEEETTTT---EEEEEESSSSCSEEEE
T ss_pred             EEEEEecCCCCCCCCEEEEEEeCCCC-CCCCCccccccccccC-CCCcceeEEEEecCccc---cccCCCCccceecccc
Confidence            99999998777899999999999765 5567899999998654 35678899999999987   3688888988888753


Q ss_pred             ccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccce
Q 035655          177 KSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMY  256 (670)
Q Consensus       177 ~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~  256 (670)
                      .                ...+.+|+.++|||+||+.+++|+|++.+..          +|..|.|++.+||+++|+++||
T Consensus       146 ~----------------~~~~~~g~~~~v~I~Yd~~~~~l~V~l~~~~----------~~~~~~ls~~vdL~~~l~~~vy  199 (228)
T d1ioaa_         146 C----------------DFHKYNGEKTDVQITYDSSNNDLRVFLHFTV----------SQVKCSVSATVHLEKEVDEWVS  199 (228)
T ss_dssp             C----------------CHHHHCSSCEEEEEEEETTTTEEEEEEEETT----------TCCEEEEEEECCGGGTSCSEEE
T ss_pred             c----------------ccccccCcEEEEEEEEcCCCCEEEEEEEeCC----------CCceeeEEEEEchHHcCCCcEE
Confidence            2                2456789999999999999999999998643          5778899999999999999999


Q ss_pred             eeEeecCC---ceeeeEEEeccccccC
Q 035655          257 VGFSASTG---RKVSSHFILGWSFSMN  280 (670)
Q Consensus       257 vGFsastg---~~~~~h~i~sW~fs~~  280 (670)
                      ||||||||   +..|.|+|++|+|+++
T Consensus       200 vGFSAsTG~~~~~~~~h~I~sWsFss~  226 (228)
T d1ioaa_         200 VGFSPTSGLTEDTTETHDVLSWSFSSK  226 (228)
T ss_dssp             EEEEEEECSSTTTCBCCEEEEEEEEEE
T ss_pred             EEEEeecCCCCCCceEEEEEEEEeEEe
Confidence            99999999   5679999999999975

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-47  Score=391.01  Aligned_cols=242  Identities=26%  Similarity=0.413  Sum_probs=192.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEeccCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYIPN  427 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~~~  427 (670)
                      ++|++.+.||+|+||+||+|+++.              ..+.|.+|+.++++++|||||+++|+|.+ +..++||||+++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~~   95 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK   95 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecCC
Confidence            579999999999999999998754              34789999999999999999999999954 568999999999


Q ss_pred             CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceee
Q 035655          428 GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTT  507 (670)
Q Consensus       428 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  507 (670)
                      |+|..++.......++|.+++.++.||+.||+|||+   ++|+||||||+|||||.++.+||+|||+++...........
T Consensus        96 g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  172 (285)
T d1fmka3          96 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  172 (285)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             CchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence            999999977655679999999999999999999998   89999999999999999999999999999877655544455


Q ss_pred             ccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHH
Q 035655          508 NVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEME  587 (670)
Q Consensus       508 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~  587 (670)
                      ...||+.|+|||++..+.++.++|||||||++|||++|..|+...... .+..... ..+.     .+.    .+....+
T Consensus       173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-~~~~~~i-~~~~-----~~~----~~~~~~~  241 (285)
T d1fmka3         173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQV-ERGY-----RMP----CPPECPE  241 (285)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHH-HTTC-----CCC----CCTTSCH
T ss_pred             cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-HHHHHHH-HhcC-----CCC----CCcccCH
Confidence            568999999999999999999999999999999999977766542211 1111111 1111     111    1222345


Q ss_pred             HHHHHHHhhccCCCCCCCCHHHHHHHhcCCC
Q 035655          588 LVLQLGLLCSHQKAEARPTMRQVLRYLNGDE  618 (670)
Q Consensus       588 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  618 (670)
                      .+.+++.+||+.||++||++++|++.|+..-
T Consensus       242 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         242 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             HHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence            6788999999999999999999999998653

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-47  Score=399.60  Aligned_cols=243  Identities=23%  Similarity=0.344  Sum_probs=193.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      .++|+..++||+|+||+||+|+...                 ..+.+.+|+++|++++|||||+++++|.+.+..++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            5689999999999999999998643                 24578899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+++|+|.+++.+..  .+++..+..++.|++.||.|||+  +++|+||||||+|||++.++.+||+|||+|+.....  
T Consensus        85 y~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--  158 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  158 (322)
T ss_dssp             CCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred             cCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHHHeeECCCCCEEEeeCCCccccCCC--
Confidence            999999999997543  59999999999999999999997  148999999999999999999999999999866432  


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcc-------------
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVL-------------  570 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~-------------  570 (670)
                       .....+||+.|||||++.+.+++.++||||+||+++||++|+.||.................+...             
T Consensus       159 -~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (322)
T d1s9ja_         159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  237 (322)
T ss_dssp             -TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------
T ss_pred             -ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccc
Confidence             234568999999999999999999999999999999999999999764322111110000000000             


Q ss_pred             ---------------------cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 ---------------------DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ---------------------~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                                           ....+.+..   ......+.+++.+||+.||.+|||++|+++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPS---GVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             --------CCCCHHHHHHHHHTSCCCCCCB---TTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccchhHHHHHhhhhccCCccCcc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                                 000011100   0112457889999999999999999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-46  Score=389.54  Aligned_cols=237  Identities=25%  Similarity=0.393  Sum_probs=194.0

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      +.|+..+.||+|+||+||+|+...                ..+.|.+|+++|++++|||||++++++.+.+..++||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            468889999999999999998643                3467889999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcce
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISH  505 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~  505 (670)
                      ++|+|.+++.+.. ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++++||+|||+|+...... ..
T Consensus        92 ~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~-~~  166 (288)
T d2jfla1          92 AGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QR  166 (288)
T ss_dssp             TTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH-HH
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCc-cc
Confidence            9999999986543 369999999999999999999998   899999999999999999999999999997654321 12


Q ss_pred             eeccccCcCCCCccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCc
Q 035655          506 TTNVVGTIGYIAPELAR-----TGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSS  580 (670)
Q Consensus       506 ~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  580 (670)
                      .....||+.|||||++.     +..++.++|||||||++|||++|+.||........  ...... ..     .+.+  .
T Consensus       167 ~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~--~~~i~~-~~-----~~~~--~  236 (288)
T d2jfla1         167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV--LLKIAK-SE-----PPTL--A  236 (288)
T ss_dssp             HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHHHHH-SC-----CCCC--S
T ss_pred             ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH--HHHHHc-CC-----CCCC--C
Confidence            33468999999999884     45689999999999999999999999976432211  111111 11     1111  1


Q ss_pred             ccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          581 YVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       581 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .+......+.+++.+||+.||.+|||++|+++|
T Consensus       237 ~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         237 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            122334567889999999999999999999885

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-46  Score=384.70  Aligned_cols=230  Identities=29%  Similarity=0.442  Sum_probs=184.8

Q ss_pred             cccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec----cCeeEEEE
Q 035655          365 KQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR----KRDLLLVY  422 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~----~~~~~lV~  422 (670)
                      +..++||+|+||+||+|++..                  ..+.|.+|+++|++++|||||++++++..    ...+++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            556789999999999997643                  23568899999999999999999999864    34689999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccce--EEecccCCCcEEec-CCCcEEEEeecCceecc
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQV--VIHRDVKSGNVLID-ADMNARLGDFGLARLFD  499 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDIkp~NILld-~~~~~kL~DFGla~~~~  499 (670)
                      ||+++|+|.+++.+.  ..+++.+++.++.||++||+|||+   ++  |+||||||+|||++ +++.+||+|||+++...
T Consensus        92 E~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             eCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence            999999999999654  369999999999999999999998   66  99999999999996 57899999999998644


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ..   ......||+.|||||++.+ +++.++|||||||++|||++|+.||........  .......+..     +   .
T Consensus       167 ~~---~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~--~~~~i~~~~~-----~---~  232 (270)
T d1t4ha_         167 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IYRRVTSGVK-----P---A  232 (270)
T ss_dssp             TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HHHHHTTTCC-----C---G
T ss_pred             CC---ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH--HHHHHHcCCC-----C---c
Confidence            32   2345689999999998865 699999999999999999999999975332111  1111111110     1   1


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .++......+.+++.+||++||++|||++|+++|
T Consensus       233 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         233 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence            1222223457889999999999999999999985

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=1.6e-46  Score=374.68  Aligned_cols=217  Identities=30%  Similarity=0.499  Sum_probs=192.3

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCC---CCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEE
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDN---AHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVF   99 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~---~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f   99 (670)
                      +.++|+|++|+.  .|   +.+.|+|.+.++|.||||+.   ...++|||+|++||+||++.++     .++||+|+|+|
T Consensus         2 ~~~sf~f~~F~~--~n---l~l~GdA~v~~~g~i~LT~~~~~~~~~~G~~~y~~Pv~l~~~~~~-----~~~sF~t~f~f   71 (226)
T d1avba_           2 NDASFNVETFNK--TN---LILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID-----NLASFSTNFTF   71 (226)
T ss_dssp             EEEEEEESSCCG--GG---EEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGT-----EEEEEEEEEEE
T ss_pred             CceEEECCCCCc--cc---eeEecceEECCCCeEEccCCCCCCccceEEEEeCCCeEcccCCCC-----cccceEEEEEE
Confidence            468999999987  67   99999999987889999964   4578999999999999999988     89999999999


Q ss_pred             EEecCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcccc
Q 035655          100 QIVTPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSI  179 (670)
Q Consensus       100 ~i~~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~  179 (670)
                      .|.+.+...+||||||+|+|.+. +.+..||++|+++.          ++|||||+.| ...+|+.+||||||+|+..+.
T Consensus        72 ~i~~~~~~~~gDG~aF~i~~~~~-~~g~~gg~~gl~~~----------~~v~fdt~~~-~~~~d~~~nhi~i~~n~~~s~  139 (226)
T d1avba_          72 RINAKNIENSAYGLAFALVPVGS-RPKLKGRYLGLFNT----------TNYDRDAHTV-AVVFDTVSNRIEIDVNSIRPI  139 (226)
T ss_dssp             EEEESSTTSCCEEEEEEEEETTC-CCCCCGGGTTTCSC----------SSCCGGGCCE-EEEEETTTTEEEEEESSSSCS
T ss_pred             EEecCCCCCCCceEEEEEccCCC-CCCCccccCCcccc----------ccccccceec-cccccCCCCEEEEeCCCCccc
Confidence            99998778899999999999875 44567889999764          3699999998 666799999999999999988


Q ss_pred             cccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeE
Q 035655          180 KLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGF  259 (670)
Q Consensus       180 ~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGF  259 (670)
                      .+.+.         ...+.+|+.++|||+||+.+++|+|++...+          +|..|.++..+||+.+||++|||||
T Consensus       140 ~~~~~---------~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~----------~~~~~~~~~~vdL~~~l~~~~y~GF  200 (226)
T d1avba_         140 ATESC---------NFGHNNGEKAEVRITYDSPKNDLRVSLLYPS----------SEEKCHVSATVPLEKEVEDWVSVGF  200 (226)
T ss_dssp             EEEEC---------CSGGGTTCEEEEEEEEEGGGTEEEEEEEETT----------TTEEEEEEEECCHHHHSCSEEEEEE
T ss_pred             ccccc---------ccccCCCeEEEEEEEEcCCCcEEEEEEEeCC----------CCccEEEEEEecHHHccCCcEEEEE
Confidence            77763         3567899999999999999999999998654          4677889999999999999999999


Q ss_pred             eecCCc---eeeeEEEeccccccC
Q 035655          260 SASTGR---KVSSHFILGWSFSMN  280 (670)
Q Consensus       260 sastg~---~~~~h~i~sW~fs~~  280 (670)
                      ||+||.   ..|.|+|++|+|+++
T Consensus       201 SAaTG~~s~~~~~H~IlsWsF~s~  224 (226)
T d1avba_         201 SATSGSKKETTETHNVLSWSFSSN  224 (226)
T ss_dssp             EEEECSSGGGCEEEEEEEEEEEEE
T ss_pred             EEEcCCCCCCeeeeEEEEEEeEEe
Confidence            999994   678999999999975

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-46  Score=384.74  Aligned_cols=238  Identities=22%  Similarity=0.383  Sum_probs=185.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .++|+..+.||+|+||.||+|++..                    ..+.|.+|+++|++++||||++++|+|. .+..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            3578899999999999999997532                    2356899999999999999999999996 467899


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ||||+++|+|.+++.... ..+++..++.++.||++||.|||+   ++|+||||||+||+++.++.+||+|||+++....
T Consensus        85 v~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~  160 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  160 (273)
T ss_dssp             EEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             EEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheeccC
Confidence            999999999999886543 469999999999999999999999   9999999999999999999999999999987765


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ..........||+.|+|||++.+..++.++|||||||++|||++ |+.||...... +...+    ..+..     +.  
T Consensus       161 ~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i----~~~~~-----~~--  229 (273)
T d1mp8a_         161 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI----ENGER-----LP--  229 (273)
T ss_dssp             ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----HTTCC-----CC--
T ss_pred             CcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHH----HcCCC-----CC--
Confidence            55445556688999999999999999999999999999999998 89999764332 22111    11111     11  


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                        .+......+.+++..||+.||.+|||++||+++|+.
T Consensus       230 --~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~  265 (273)
T d1mp8a_         230 --MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  265 (273)
T ss_dssp             --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             --CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence              122233567889999999999999999999999863

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-46  Score=385.03  Aligned_cols=234  Identities=23%  Similarity=0.319  Sum_probs=192.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|+..+.||+|+||+||+|....                   ..+.+.+|+++|++++||||+++++++.+++..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            569999999999999999997643                   2346889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|.+++...  ..+++.++..++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||+|+......
T Consensus        88 Ey~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~  162 (288)
T d1uu3a_          88 SYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  162 (288)
T ss_dssp             CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceecccCC
Confidence            999999999998654  369999999999999999999999   999999999999999999999999999999876443


Q ss_pred             -cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          503 -ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       503 -~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                       ........||+.|||||++.+..++.++|||||||++|||++|+.||........   .......+      ..+    
T Consensus       163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~---~~~i~~~~------~~~----  229 (288)
T d1uu3a_         163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI---FQKIIKLE------YDF----  229 (288)
T ss_dssp             -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHTTC------CCC----
T ss_pred             cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHH---HHHHHcCC------CCC----
Confidence             2233456899999999999999999999999999999999999999986432211   11111111      111    


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      +......+.+++..||+.||.+|||++|++++
T Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         230 PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  261 (288)
T ss_dssp             CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence            11223567889999999999999999997654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-46  Score=381.29  Aligned_cols=235  Identities=30%  Similarity=0.414  Sum_probs=188.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------hHHHHHHHHHHHhccccCceeeeeeeeec-cCeeEEEEeccCCC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------RMREFAAEIESLGRLRHKHLVNLQGWCKR-KRDLLLVYDYIPNG  428 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-~~~~~lV~E~~~~g  428 (670)
                      ++|+..++||+|+||.||+|++.+            ..+.|.+|++++++++||||++++|+|.+ .+.+++||||+++|
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g   86 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   86 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             HHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCC
Confidence            567888999999999999998754            35789999999999999999999999865 46789999999999


Q ss_pred             CchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcceeec
Q 035655          429 SLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKISHTTN  508 (670)
Q Consensus       429 sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  508 (670)
                      +|.++|.+.....++|..+++++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....    ...
T Consensus        87 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~----~~~  159 (262)
T d1byga_          87 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDT  159 (262)
T ss_dssp             EHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--------------
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCC----Ccc
Confidence            99999977655679999999999999999999999   89999999999999999999999999999865432    233


Q ss_pred             cccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCCcccHHHH
Q 035655          509 VVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYVVAEM  586 (670)
Q Consensus       509 ~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  586 (670)
                      ..+|..|+|||++.++.++.++|||||||++|||+| |+.||...... ...++    ..+     ..+..    +....
T Consensus       160 ~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i----~~~-----~~~~~----~~~~~  226 (262)
T d1byga_         160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV----EKG-----YKMDA----PDGCP  226 (262)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH----TTT-----CCCCC----CTTCC
T ss_pred             ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH----HcC-----CCCCC----CccCC
Confidence            468999999999999999999999999999999998 68777653322 22221    111     11222    22223


Q ss_pred             HHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          587 ELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       587 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+++.+||+.||.+|||+++++++|+.
T Consensus       227 ~~~~~li~~cl~~dP~~Rps~~~l~~~L~~  256 (262)
T d1byga_         227 PAVYEVMKNCWHLDAAMRPSFLQLREQLEH  256 (262)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            567889999999999999999999999974

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.8e-46  Score=388.59  Aligned_cols=238  Identities=23%  Similarity=0.326  Sum_probs=182.0

Q ss_pred             hhcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          360 ATKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       360 ~t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ..+.|+..+.||+|+||+||+|+...                 ..+.+.+|+++|++++||||+++++++.+++.+++||
T Consensus         7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvm   86 (307)
T d1a06a_           7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM   86 (307)
T ss_dssp             GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            34679999999999999999998643                 1245678999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec---CCCcEEEEeecCceecc
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID---ADMNARLGDFGLARLFD  499 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld---~~~~~kL~DFGla~~~~  499 (670)
                      ||+++|+|.++|...  ..+++.++..++.||+.||+|||+   ++|+||||||+|||+.   +++.+||+|||+++...
T Consensus        87 E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~  161 (307)
T d1a06a_          87 QLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED  161 (307)
T ss_dssp             CCCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred             eccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence            999999999999654  469999999999999999999998   9999999999999994   57899999999998665


Q ss_pred             CCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ...  .....+||+.|||||++.+..++.++|||||||++|||++|+.||........  ... .....      .....
T Consensus       162 ~~~--~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~--~~~-i~~~~------~~~~~  230 (307)
T d1a06a_         162 PGS--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL--FEQ-ILKAE------YEFDS  230 (307)
T ss_dssp             -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHTTC------CCCCT
T ss_pred             CCC--eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH--HHH-HhccC------CCCCC
Confidence            432  23446899999999999999999999999999999999999999986432211  111 11111      11111


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .........+.+++..||++||.+|||++|+++|
T Consensus       231 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            1122233567889999999999999999999996

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-45  Score=385.17  Aligned_cols=231  Identities=28%  Similarity=0.423  Sum_probs=190.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      +.|+..+.||+|+||.||+|+...                   ..+.|.+|+++|++++|||||++++++.+++..++||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            458899999999999999997643                   2356889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      |||++|+|..++..+  ..+++.+++.++.||+.||.|||+   ++|+||||||+||||+.++.+||+|||+++....  
T Consensus        95 E~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~--  167 (309)
T d1u5ra_          95 EYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--  167 (309)
T ss_dssp             ECCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred             EecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCC--
Confidence            999999998776544  469999999999999999999999   8999999999999999999999999999986543  


Q ss_pred             cceeeccccCcCCCCcccccc---CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCC
Q 035655          503 ISHTTNVVGTIGYIAPELART---GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                         .....||+.|||||++.+   +.++.++|||||||++|||++|+.||.......  ...... ...     .+.+..
T Consensus       168 ---~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~--~~~~i~-~~~-----~~~~~~  236 (309)
T d1u5ra_         168 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIA-QNE-----SPALQS  236 (309)
T ss_dssp             ---BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHH-HSC-----CCCCSC
T ss_pred             ---CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH--HHHHHH-hCC-----CCCCCC
Confidence               234579999999999864   468999999999999999999999997643211  111111 111     111111


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                         ....+.+.+++..||+.||.+|||++|+++|
T Consensus       237 ---~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         237 ---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             ---CCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence               1123567889999999999999999999985

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-46  Score=389.42  Aligned_cols=238  Identities=25%  Similarity=0.403  Sum_probs=192.8

Q ss_pred             cCccccceEeeeCceeEEEeeccc---------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT---------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLL  420 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~---------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~l  420 (670)
                      .+|+..++||+|+||+||+|.+..                     ..++|.+|++++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            469999999999999999997531                     346799999999999999999999999865 5678


Q ss_pred             EEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccC
Q 035655          421 VYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDH  500 (670)
Q Consensus       421 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~  500 (670)
                      ++||+.+|+|.+++.... ..+++..+++++.|||.||+|||+   ++|+||||||+||||+.++.+||+|||+++....
T Consensus        88 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  163 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  163 (317)
T ss_dssp             EEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred             EEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence            899999999999887654 479999999999999999999999   8999999999999999999999999999987755


Q ss_pred             CCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          501 GKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       501 ~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      .... ......||+.|||||++.++.++.++|||||||++|||+| |+.||.........   .....+..     +   
T Consensus       164 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~---~~i~~~~~-----~---  232 (317)
T d1xkka_         164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SILEKGER-----L---  232 (317)
T ss_dssp             TCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH---HHHHHTCC-----C---
T ss_pred             ccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH---HHHHcCCC-----C---
Confidence            4432 2344578999999999999999999999999999999998 88898764322111   11111111     1   


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                       ..+......+.+++.+||+.||.+|||++||+++|+.
T Consensus       233 -~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~  269 (317)
T d1xkka_         233 -PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK  269 (317)
T ss_dssp             -CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHH
Confidence             1122233567889999999999999999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=5e-45  Score=387.49  Aligned_cols=238  Identities=23%  Similarity=0.339  Sum_probs=197.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      -++|++.+.||+|+||.||+|+...                ..+.+.+|+++|++++|||||++++++.+.+.+++||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4689999999999999999998643                245688999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC--CCcEEEEeecCceeccCCC
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA--DMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~--~~~~kL~DFGla~~~~~~~  502 (670)
                      |++|+|.+++.+.. ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.  ++.+||+|||+++......
T Consensus       105 ~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~  180 (350)
T d1koaa2         105 MSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  180 (350)
T ss_dssp             CCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS
T ss_pred             CCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheeccccc
Confidence            99999999986543 369999999999999999999999   99999999999999964  6789999999998775543


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                        ......||+.|||||++.+..++.++|||||||++|||++|+.||......  +....... ..      ........
T Consensus       181 --~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~-~~------~~~~~~~~  249 (350)
T d1koaa2         181 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRNVKS-CD------WNMDDSAF  249 (350)
T ss_dssp             --CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH-TC------CCSCCGGG
T ss_pred             --ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHHh-CC------CCCCcccc
Confidence              334568999999999999999999999999999999999999999764321  11111111 11      11111122


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ....+.+.+++.+||+.||++|||++|+++|
T Consensus       250 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         250 SGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             GGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            2234567889999999999999999999997

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.9e-46  Score=386.69  Aligned_cols=245  Identities=25%  Similarity=0.404  Sum_probs=198.4

Q ss_pred             HHHhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeec
Q 035655          357 LYTATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR  414 (670)
Q Consensus       357 l~~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~  414 (670)
                      ++-..++|+..+.||+|+||+||+|+.+.                      ..++|.+|+++|++++||||++++++|..
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~   87 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV   87 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence            33356789999999999999999997431                      24679999999999999999999999999


Q ss_pred             cCeeEEEEeccCCCCchhhcccCC----------------------ccccCHHHHHHHHHHHHHHhhhccccccceEEec
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNE----------------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHR  472 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHr  472 (670)
                      .+..++|+||+++|+|.++|....                      ...++|.+++.++.|++.||+|||+   ++++||
T Consensus        88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~ivHr  164 (301)
T d1lufa_          88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHR  164 (301)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeEee
Confidence            999999999999999999996422                      2348999999999999999999998   999999


Q ss_pred             ccCCCcEEecCCCcEEEEeecCceeccCCC-cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCC-CCCC
Q 035655          473 DVKSGNVLIDADMNARLGDFGLARLFDHGK-ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGR-RPID  550 (670)
Q Consensus       473 DIkp~NILld~~~~~kL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~-~pf~  550 (670)
                      ||||+|||||.++.+||+|||+++...... ....+...||+.|+|||++.+..++.++|||||||++|||++|. .||.
T Consensus       165 DlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~  244 (301)
T d1lufa_         165 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  244 (301)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             EEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCC
Confidence            999999999999999999999998664432 22334567899999999999999999999999999999999985 5676


Q ss_pred             CCcch-hHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          551 SDHFI-LVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       551 ~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ..... ....    ...+..     +..    +...+..+.+++..||+.+|.+||||.||++.|++.
T Consensus       245 ~~~~~e~~~~----v~~~~~-----~~~----p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         245 GMAHEEVIYY----VRDGNI-----LAC----PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             TSCHHHHHHH----HHTTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCHHHHHHH----HHcCCC-----CCC----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            53322 1111    111221     111    122235678999999999999999999999999753

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-45  Score=377.14  Aligned_cols=237  Identities=22%  Similarity=0.357  Sum_probs=196.5

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|+..+.||+|+||+||+|+...                      ..+.|.+|+++|++++|||||++++++.+.+..
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            4679999999999999999998643                      246789999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC----cEEEEeecC
Q 035655          419 LLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM----NARLGDFGL  494 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~----~~kL~DFGl  494 (670)
                      ++|||||++|+|.++|...  ..+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++    .+||+|||+
T Consensus        89 ~iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~  163 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  163 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecchhh
Confidence            9999999999999999654  369999999999999999999999   9999999999999998776    599999999


Q ss_pred             ceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          495 ARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       495 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      ++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ..... ..      .
T Consensus       164 a~~~~~~~--~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~--~~~i~-~~------~  232 (293)
T d1jksa_         164 AHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET--LANVS-AV------N  232 (293)
T ss_dssp             CEECTTSC--BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH-TT------C
T ss_pred             hhhcCCCc--cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH--HHHHH-hc------C
Confidence            98775443  23445799999999999999999999999999999999999999986432211  11111 11      1


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..............+.+++.+||+.||.+|||++|+++|
T Consensus       233 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         233 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111111222234567889999999999999999999985

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.3e-44  Score=384.60  Aligned_cols=237  Identities=20%  Similarity=0.323  Sum_probs=196.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      ++|++.+.||+|+||.||+|+...                ..+.+.+|+++|++|+|||||++++++.+++.+++||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            579999999999999999998643                2456789999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec--CCCcEEEEeecCceeccCCCc
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID--ADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld--~~~~~kL~DFGla~~~~~~~~  503 (670)
                      ++|+|.+++.... ..+++.+++.++.||+.||.|||+   ++|+||||||+||||+  .++.+||+|||+|+...... 
T Consensus       109 ~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~-  183 (352)
T d1koba_         109 SGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-  183 (352)
T ss_dssp             CCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred             CCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCCCC-
Confidence            9999998876543 369999999999999999999998   9999999999999998  67899999999999876543 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                       ......||+.|||||++.+..++.++|||||||++|||+||+.||........  ..... ...      .........
T Consensus       184 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--~~~i~-~~~------~~~~~~~~~  253 (352)
T d1koba_         184 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET--LQNVK-RCD------WEFDEDAFS  253 (352)
T ss_dssp             -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--HHHHH-HCC------CCCCSSTTT
T ss_pred             -ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH-hCC------CCCCccccc
Confidence             33456799999999999999999999999999999999999999986432211  11111 111      111111122


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .....+.+++.+||+.||.+|||++|+++|
T Consensus       254 ~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         254 SVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            233567889999999999999999999997

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=3.1e-44  Score=352.07  Aligned_cols=199  Identities=28%  Similarity=0.479  Sum_probs=166.5

Q ss_pred             CceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEe
Q 035655           23 QKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIV  102 (670)
Q Consensus        23 ~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~  102 (670)
                      ..++|+|++|+.  .+   |.++|+|.+.++|.||||++..+++|||+|++||+||++.++     +++||+|+|+|.|.
T Consensus         2 ~~~sF~~~~F~~--~~---l~l~GdA~v~~~g~i~LT~~~~~~~G~~~y~~Pi~l~~~~~~-----~~~sF~t~F~f~i~   71 (204)
T d1dhkb_           2 TETSFIIDAFNK--TN---LILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTG-----NVASFDTNFTMNIR   71 (204)
T ss_dssp             CCCEEEESSCCG--GG---EEEESSEEECTTSCEEESSSCSSEEEEEEESSCEESEETTTT-----EECEEEEEEEEEEE
T ss_pred             ccceEECCCCCc--cC---eeEecceEEcCCCeEEeCCCCCCCEEEEEeCCCEeccCCCCc-----ccccEEEEEEEEEe
Confidence            468999999977  67   999999999878999999999999999999999999999998     89999999999999


Q ss_pred             cCCCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCccccccc
Q 035655          103 TPNSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLE  182 (670)
Q Consensus       103 ~~~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~~  182 (670)
                      +.+...+||||||+++|...                   ...++.+||||||++|          |+++|+++.......
T Consensus        72 ~~~~~~~gdGlaf~~~~~~~-------------------~~~~~~~~vefDt~~n----------~~~~d~~~~~~~~~~  122 (204)
T d1dhkb_          72 THRQANSAVGLDFVLVPVQP-------------------ESKGDTVTVEFDTFLS----------RISIDVNNNDIKSVP  122 (204)
T ss_dssp             CCC---CCSEEEEEEEEC-------------------------CCEEEEEETTTT----------EEEEEETTEEEEEEE
T ss_pred             cCCCCCCCceEEEEecCCCC-------------------CCCCcEeeEeeEcccc----------cccCccccccccccc
Confidence            88777799999999998642                   2335789999999854          677777765432211


Q ss_pred             ccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEeec
Q 035655          183 PAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAS  262 (670)
Q Consensus       183 ~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsas  262 (670)
                                ..+.+.+|+.++|||+||+.+++|+|++...+          +|..|.|+..+||+++||++||||||||
T Consensus       123 ----------~~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~----------~~~~~~l~~~vdL~~~l~~~~yvGFSAa  182 (204)
T d1dhkb_         123 ----------WDVHDYDGQNAEVRITYNSSTKVFSVSLSNPS----------TGKSNNVSTTVELEKEVYDWVSVGFSAT  182 (204)
T ss_dssp             ----------CCGGGTTTSCEEEEEEEETTTTEEEEEEECTT----------TCCEEEEEEECCCCSGGGSEEEEEEEEE
T ss_pred             ----------cccEecCCCEEEEEEEEcCCCEEEEEEEecCC----------CCCceeEEEEecchhccCCcEEEEEEee
Confidence                      23677899999999999999999999998654          3566889999999999999999999999


Q ss_pred             CCc---eeeeEEEeccccccC
Q 035655          263 TGR---KVSSHFILGWSFSMN  280 (670)
Q Consensus       263 tg~---~~~~h~i~sW~fs~~  280 (670)
                      ||.   ..|+|+|++|+|+++
T Consensus       183 TG~~~~~~e~H~IlsWsFss~  203 (204)
T d1dhkb_         183 SGAYQWSYETHDVLSWSFSSK  203 (204)
T ss_dssp             ECSGGGSCCEEEEEEEEEEEE
T ss_pred             cCCCCCCceeeEEEEEEEEec
Confidence            996   368999999999864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-45  Score=376.62  Aligned_cols=239  Identities=25%  Similarity=0.353  Sum_probs=189.1

Q ss_pred             cCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      ++|+..+.||+|+||.||+|+...                      ..++|.+|+++|++++||||++++|+|.+ ...+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            568899999999999999997421                      23578999999999999999999999976 4678


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||||+++|+|.+++..+. ..+++..+++++.|||.||.|||+   ++|+||||||+||||+.++.+||+|||+++...
T Consensus        87 lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~  162 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP  162 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             eeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhhcc
Confidence            9999999999999887653 369999999999999999999999   899999999999999999999999999999875


Q ss_pred             CCCcce--eeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHHHHHHhhcCCcccccCCC
Q 035655          500 HGKISH--TTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDWVLEFQHLGQVLDVVDPN  576 (670)
Q Consensus       500 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~  576 (670)
                      ......  .....||..|+|||++.+..++.++|||||||++|||+| |+.||........  .......+..     +.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~--~~~i~~~~~~-----~~  235 (273)
T d1u46a_         163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI--LHKIDKEGER-----LP  235 (273)
T ss_dssp             C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHHHTSCCC-----CC
T ss_pred             cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHH--HHHHHhCCCC-----CC
Confidence            543222  234578899999999999999999999999999999998 8999976432211  1111111111     11


Q ss_pred             CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          577 LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       577 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                          .+...+..+.+++.+||+.||++|||++||++.|++
T Consensus       236 ----~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         236 ----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence                111223567889999999999999999999999874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-45  Score=381.14  Aligned_cols=239  Identities=30%  Similarity=0.431  Sum_probs=193.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ++|+..++||+|+||.||+|++..                   ..++|.+|+++|+++ +|||||+++|+|.+++.+++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            578889999999999999997643                   235789999999999 799999999999999999999


Q ss_pred             EeccCCCCchhhcccC--------------CccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcE
Q 035655          422 YDYIPNGSLDSLLFDN--------------ENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNA  487 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~  487 (670)
                      |||+++|+|.++|+.+              ....++|.++.+++.|||.||.|||+   ++|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCce
Confidence            9999999999999754              23569999999999999999999999   899999999999999999999


Q ss_pred             EEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCC-CCCCCcchhHHHHHHHhhc
Q 035655          488 RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRR-PIDSDHFILVDWVLEFQHL  566 (670)
Q Consensus       488 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~-pf~~~~~~~~~~~~~~~~~  566 (670)
                      ||+|||+++......  ......||..|+|||.+.++.++.++|||||||++|||++|.. ||......  +.... ...
T Consensus       167 kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~--~~~~~-i~~  241 (309)
T d1fvra_         167 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEK-LPQ  241 (309)
T ss_dssp             EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH-GGG
T ss_pred             EEccccccccccccc--cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH--HHHHH-HHh
Confidence            999999998554322  2234578999999999999999999999999999999999765 56543211  11111 111


Q ss_pred             CCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          567 GQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       567 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      +     ..+..    +......+.+++.+||+.||++||||+||+++|+..
T Consensus       242 ~-----~~~~~----~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i  283 (309)
T d1fvra_         242 G-----YRLEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  283 (309)
T ss_dssp             T-----CCCCC----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             c-----CCCCC----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            1     11211    222335678899999999999999999999998753

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-44  Score=376.78  Aligned_cols=236  Identities=27%  Similarity=0.448  Sum_probs=190.5

Q ss_pred             cceEeeeCceeEEEeeccc--------------------hHHHHHHHHHHHhccccCceeeeeeeeec-cCeeEEEEecc
Q 035655          367 SEVIGTGGFGEVYKGVLPT--------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR-KRDLLLVYDYI  425 (670)
Q Consensus       367 ~~~lG~G~fg~Vykg~~~~--------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~-~~~~~lV~E~~  425 (670)
                      .++||+|+||+||+|++..                    ..++|.+|+++|++++||||++++|+|.+ ++..++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            5789999999999997532                    23679999999999999999999999875 56899999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc-
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS-  504 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~-  504 (670)
                      ++|+|.+++.... ..+++..+++++.|+++||.|||+   ++|+||||||+||||++++.+||+|||+++........ 
T Consensus       112 ~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~  187 (311)
T d1r0pa_         112 KHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS  187 (311)
T ss_dssp             TTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCC
T ss_pred             ecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhcccccccc
Confidence            9999999987553 468899999999999999999998   89999999999999999999999999999876544322 


Q ss_pred             --eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          505 --HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       505 --~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                        ......||+.|+|||.+.++.++.++|||||||++|||+||+.||..... ..+...... .+..  ...|       
T Consensus       188 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~-~~~~~~~i~-~g~~--~~~p-------  256 (311)
T d1r0pa_         188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-TFDITVYLL-QGRR--LLQP-------  256 (311)
T ss_dssp             TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHH-TTCC--CCCC-------
T ss_pred             ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCC-HHHHHHHHH-cCCC--CCCc-------
Confidence              22345789999999999999999999999999999999998888765321 111111111 1111  1111       


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          583 VAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ......+.+++.+||+.||++||+|.||+++|++.
T Consensus       257 ~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i  291 (311)
T d1r0pa_         257 EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  291 (311)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            11235678899999999999999999999999754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-44  Score=375.03  Aligned_cols=242  Identities=24%  Similarity=0.336  Sum_probs=187.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc-C
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK-R  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~-~  416 (670)
                      .++|+..++||+|+||.||+|....                      ..+.+.+|+..+.++ +|+||+++++++.+. .
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            3578999999999999999997421                      235677888888887 689999999998764 5


Q ss_pred             eeEEEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID  482 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld  482 (670)
                      .+++||||+++|+|.++|....              ...+++.+++.++.||++||+|||+   ++|+||||||+||||+
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcCCccceeEC
Confidence            6899999999999999996542              2358999999999999999999999   8999999999999999


Q ss_pred             CCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCC-CCCCCCcchhHHHH
Q 035655          483 ADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGR-RPIDSDHFILVDWV  560 (670)
Q Consensus       483 ~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~-~pf~~~~~~~~~~~  560 (670)
                      +++.+||+|||+|+....... .......||+.|||||++.++.++.++|||||||++|||++|. .||......  ...
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~--~~~  246 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEF  246 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS--HHH
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH--HHH
Confidence            999999999999987654332 2334568999999999999999999999999999999999964 577653221  111


Q ss_pred             HHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          561 LEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       561 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......+..     +..    +......+.+++.+||+.||.+|||++||+++|+.
T Consensus       247 ~~~~~~~~~-----~~~----~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~  293 (299)
T d1ywna1         247 CRRLKEGTR-----MRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  293 (299)
T ss_dssp             HHHHHHTCC-----CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhcCCC-----CCC----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            111111111     111    11223567889999999999999999999999974

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-44  Score=376.91  Aligned_cols=234  Identities=23%  Similarity=0.293  Sum_probs=195.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      .++|+..+.||+|+||.||+|+...                   ..+.+.+|+.+|++++||||+++++++.+.+.+++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            3579999999999999999998643                   235678999999999999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++.+..  .+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+.....
T Consensus        84 ~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~  158 (337)
T d1o6la_          84 MEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             eeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeecccccccccC
Confidence            99999999999987643  58999999999999999999999   99999999999999999999999999999865432


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      . ......+||+.|||||++.+..++.++||||+||++|||++|+.||........   ......+.      +.+..  
T Consensus       159 ~-~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~---~~~i~~~~------~~~p~--  226 (337)
T d1o6la_         159 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEE------IRFPR--  226 (337)
T ss_dssp             T-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHCC------CCCCT--
T ss_pred             C-cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHH---HHHHhcCC------CCCCc--
Confidence            2 234456899999999999999999999999999999999999999987543211   11111111      11111  


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPT-----MRQVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  613 (670)
                        .....+.+++..||++||.+||+     ++|+++|
T Consensus       227 --~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         227 --TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             --TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             --cCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence              22345778999999999999995     8899886

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8e-44  Score=373.18  Aligned_cols=230  Identities=24%  Similarity=0.313  Sum_probs=193.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|++.+.||+|+||+||+|+...                   ..+.+.+|+.+|++++||||+++++++.+.+.+++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            569999999999999999998643                   2356889999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+++|+|..++....  .+++..+..++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+|+..... 
T Consensus        84 E~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~-  157 (316)
T d1fota_          84 DYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-  157 (316)
T ss_dssp             CCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred             eecCCccccccccccc--cccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEeccc-
Confidence            9999999999986654  58889999999999999999999   89999999999999999999999999999876542 


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                         .....||+.|||||++.+..++.++|||||||++|||++|+.||........  ... ...+.      ..+    +
T Consensus       158 ---~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~-i~~~~------~~~----p  221 (316)
T d1fota_         158 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT--YEK-ILNAE------LRF----P  221 (316)
T ss_dssp             ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHH-HHHCC------CCC----C
T ss_pred             ---cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH--HHH-HHcCC------CCC----C
Confidence               3346899999999999999999999999999999999999999986442211  111 11111      111    1


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEARP-----TMRQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  613 (670)
                      ......+.+++.+||++||.+||     +++++++|
T Consensus       222 ~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         222 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            11234577899999999999996     89999886

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=376.21  Aligned_cols=241  Identities=27%  Similarity=0.403  Sum_probs=194.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------------hHHHHHHHHHHHhcc-ccCceeeeeeeeecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------------RMREFAAEIESLGRL-RHKHLVNLQGWCKRK  415 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~~  415 (670)
                      .++|...+.||+|+||.||+|+...                        ...++.+|+..+.++ +|||||+++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            3578889999999999999986421                        246788999999998 799999999999999


Q ss_pred             CeeEEEEeccCCCCchhhcccCC--------------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEe
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNE--------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLI  481 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILl  481 (670)
                      +..++||||+++|+|.++|....              ...+++.++++++.||+.||+|||+   ++|+||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeecccceee
Confidence            99999999999999999997543              2458999999999999999999999   999999999999999


Q ss_pred             cCCCcEEEEeecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhHHH
Q 035655          482 DADMNARLGDFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIAT-GRRPIDSDHFILVDW  559 (670)
Q Consensus       482 d~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~t-G~~pf~~~~~~~~~~  559 (670)
                      +.++.+||+|||+++........ ......||+.|+|||.+.++.++.++|||||||++|||++ |+.||.......   
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~---  245 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---  245 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH---
Confidence            99999999999999877654432 2344678999999999999999999999999999999998 788887543221   


Q ss_pred             HHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          560 VLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       560 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +......+.     .+..    +......+.+++.+||+.||.+|||+.||++.|++
T Consensus       246 ~~~~i~~~~-----~~~~----p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~  293 (299)
T d1fgka_         246 LFKLLKEGH-----RMDK----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR  293 (299)
T ss_dssp             HHHHHHTTC-----CCCC----CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHcCC-----CCCC----CccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            112211111     1111    12223568899999999999999999999999964

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-44  Score=376.06  Aligned_cols=251  Identities=23%  Similarity=0.275  Sum_probs=197.2

Q ss_pred             hcCccccc-eEeeeCceeEEEeeccc-----------hHHHHHHHHHHHhcc-ccCceeeeeeeeec----cCeeEEEEe
Q 035655          361 TKGFKQSE-VIGTGGFGEVYKGVLPT-----------RMREFAAEIESLGRL-RHKHLVNLQGWCKR----KRDLLLVYD  423 (670)
Q Consensus       361 t~~f~~~~-~lG~G~fg~Vykg~~~~-----------~~~~f~~Ei~~L~~l-~H~nIv~l~g~~~~----~~~~~lV~E  423 (670)
                      .++|.+.+ .||+|+||+||+|+...           ....+.+|+.++.++ +|||||++++++.+    ...+|+|||
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE   89 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   89 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence            35788765 59999999999998754           246778999987665 89999999999865    467899999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC---CCcEEEEeecCceeccC
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA---DMNARLGDFGLARLFDH  500 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~---~~~~kL~DFGla~~~~~  500 (670)
                      ||++|+|.++|.+.....+++.++..++.||+.||+|||+   .+|+||||||+|||++.   ++.+||+|||+|+....
T Consensus        90 y~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~  166 (335)
T d2ozaa1          90 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS  166 (335)
T ss_dssp             CCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred             CCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHH---cCCccccccccccccccccccccccccccceeeeccC
Confidence            9999999999987655679999999999999999999998   99999999999999985   45799999999987655


Q ss_pred             CCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhcCCcccccCCCCCC
Q 035655          501 GKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHLGQVLDVVDPNLGS  579 (670)
Q Consensus       501 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~~~~~~~~d~~l~~  579 (670)
                      ..  ......||+.|||||++.+..++.++|||||||++|||+||+.||...... ........      .......+..
T Consensus       167 ~~--~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~------i~~~~~~~~~  238 (335)
T d2ozaa1         167 HN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR------IRMGQYEFPN  238 (335)
T ss_dssp             CC--CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------C------CCSCSSSCCT
T ss_pred             CC--ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHH------HhcCCCCCCC
Confidence            43  234568999999999999999999999999999999999999999753221 11111000      0001111111


Q ss_pred             cccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH--hcCCCCCCC
Q 035655          580 SYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY--LNGDELLPI  622 (670)
Q Consensus       580 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~~~~~p~  622 (670)
                      .........+.+++.+||+.||.+|||+.|+++|  +.+....|.
T Consensus       239 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~  283 (335)
T d2ozaa1         239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ  283 (335)
T ss_dssp             THHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCC
T ss_pred             cccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCC
Confidence            2223445678899999999999999999999996  544444443

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-44  Score=371.20  Aligned_cols=248  Identities=26%  Similarity=0.352  Sum_probs=190.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------hHHHHHH--HHHHHhccccCceeeeeeeeeccC----eeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------RMREFAA--EIESLGRLRHKHLVNLQGWCKRKR----DLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------~~~~f~~--Ei~~L~~l~H~nIv~l~g~~~~~~----~~~lV~E~  424 (670)
                      +.|...+.||+|+||.||+|+..+           ..+.+..  |+..+.+++||||++++|+|.+.+    .+++||||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey   82 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence            457778899999999999998644           2334444  555566789999999999998654    58999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccc-----cceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEW-----EQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      |++|+|.++|++.   .++|.++++++.|+|.||+|||+..     +++|+||||||+||||+.++.+||+|||+++...
T Consensus        83 ~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~  159 (303)
T d1vjya_          83 HEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             CTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             ccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccccc
Confidence            9999999999653   5899999999999999999999731     4799999999999999999999999999998775


Q ss_pred             CCCcc---eeeccccCcCCCCccccccCC------CCccchhHHHHHHHHHHHhCCCCCCCCcch------------hHH
Q 035655          500 HGKIS---HTTNVVGTIGYIAPELARTGK------ASCSTDVFAYGVLLLEIATGRRPIDSDHFI------------LVD  558 (670)
Q Consensus       500 ~~~~~---~~~~~~gt~~y~aPE~~~~~~------~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~------------~~~  558 (670)
                      .....   ......||+.|||||++.+..      ++.|+|||||||++|||+||+.|+......            ...
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~  239 (303)
T d1vjya_         160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE  239 (303)
T ss_dssp             TTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred             CCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHH
Confidence            54322   234568999999999987542      577999999999999999999887431100            011


Q ss_pred             HHHHHhhcCCcccccCCCCCCcc-cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          559 WVLEFQHLGQVLDVVDPNLGSSY-VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       559 ~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ......    .....+|.+.... .......+.+++.+||+.||++|||+.||++.|+.
T Consensus       240 ~~~~~~----~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~  294 (303)
T d1vjya_         240 EMRKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             HHHHHH----TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHH----hccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            111111    1112233333322 33456778999999999999999999999999863

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-44  Score=375.80  Aligned_cols=254  Identities=22%  Similarity=0.345  Sum_probs=201.1

Q ss_pred             CCccchhhHH-HhhcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhcc-ccCc
Q 035655          349 PHRFRYSDLY-TATKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRL-RHKH  404 (670)
Q Consensus       349 ~~~~~~~~l~-~~t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l-~H~n  404 (670)
                      |.++.|.... ...++|+..++||+|+||.||+|++..                      ...+|.+|+.+++++ +|||
T Consensus         9 ~~~~~~~~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~Hpn   88 (311)
T d1t46a_           9 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN   88 (311)
T ss_dssp             TTTSCCCGGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             cccCCCcccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCC
Confidence            4444443322 234688899999999999999996421                      345788999999999 6999


Q ss_pred             eeeeeeeeeccCeeEEEEeccCCCCchhhcccCC----------------ccccCHHHHHHHHHHHHHHhhhccccccce
Q 035655          405 LVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNE----------------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQV  468 (670)
Q Consensus       405 Iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~  468 (670)
                      ||+++|+|.+.+..++||||+++|+|.++|++..                ...+++..+.+++.||++||+|||+   ++
T Consensus        89 Iv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~  165 (311)
T d1t46a_          89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KN  165 (311)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             EEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence            9999999999999999999999999999997543                2358999999999999999999999   89


Q ss_pred             EEecccCCCcEEecCCCcEEEEeecCceeccCCCc-ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhC-C
Q 035655          469 VIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI-SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATG-R  546 (670)
Q Consensus       469 ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG-~  546 (670)
                      ++||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.++.++.++|||||||++|||+|+ .
T Consensus       166 ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~  245 (311)
T d1t46a_         166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS  245 (311)
T ss_dssp             CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCC
Confidence            99999999999999999999999999987765433 333456899999999999999999999999999999999994 5


Q ss_pred             CCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          547 RPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       547 ~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      .|+........  .......+.     .+.    .+......+.+|+.+||+.||++|||++||++.|++
T Consensus       246 p~~~~~~~~~~--~~~~i~~~~-----~~~----~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         246 SPYPGMPVDSK--FYKMIKEGF-----RML----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             CSSTTCCSSHH--HHHHHHHTC-----CCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHH--HHHHHhcCC-----CCC----CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            55544322111  111111111     111    111223568899999999999999999999999874

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.1e-43  Score=377.11  Aligned_cols=234  Identities=24%  Similarity=0.285  Sum_probs=189.2

Q ss_pred             cCccccceEeeeCceeEEEeeccch-------------------HHHHHH---HHHHHhccccCceeeeeeeeeccCeeE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR-------------------MREFAA---EIESLGRLRHKHLVNLQGWCKRKRDLL  419 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~-------------------~~~f~~---Ei~~L~~l~H~nIv~l~g~~~~~~~~~  419 (670)
                      ++|++.++||+|+||.||+|+....                   ...+.+   |+++++.++|||||++++++.+.+.+|
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            5799999999999999999987531                   122333   467778888999999999999999999


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      +||||+++|+|.++|.+.  ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+...
T Consensus        84 ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~  158 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS  158 (364)
T ss_dssp             EEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred             EEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence            999999999999999654  458999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCCcceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCC
Q 035655          500 HGKISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLG  578 (670)
Q Consensus       500 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  578 (670)
                      ...   .....||+.|||||++.. ..++.++|||||||++|||++|+.||.................      ..+.+.
T Consensus       159 ~~~---~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~------~~~~~~  229 (364)
T d1omwa3         159 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT------MAVELP  229 (364)
T ss_dssp             SSC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSS------CCCCCC
T ss_pred             CCc---ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc------CCCCCC
Confidence            532   344589999999999875 4689999999999999999999999976432211111111111      011111


Q ss_pred             CcccHHHHHHHHHHHHhhccCCCCCCCC-----HHHHHHH
Q 035655          579 SSYVVAEMELVLQLGLLCSHQKAEARPT-----MRQVLRY  613 (670)
Q Consensus       579 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  613 (670)
                      ..    ....+.+++..||+.||.+||+     ++|+++|
T Consensus       230 ~~----~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         230 DS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             SS----SCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             CC----CCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            12    2345788999999999999999     6899875

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3e-43  Score=361.96  Aligned_cols=236  Identities=24%  Similarity=0.373  Sum_probs=194.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------------hHHHHHHHHHHHhccc-cCceeeeeeeeecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------------RMREFAAEIESLGRLR-HKHLVNLQGWCKRK  415 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~  415 (670)
                      ++|+..+.||+|+||+||+|+...                         ..+.+.+|+.+|++++ ||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            579999999999999999997633                         1135789999999997 99999999999999


Q ss_pred             CeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCc
Q 035655          416 RDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLA  495 (670)
Q Consensus       416 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla  495 (670)
                      +..|+||||+++|+|.++|..+  ..+++.+++.++.||++||+|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a  157 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS  157 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             cceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccchhe
Confidence            9999999999999999999754  369999999999999999999998   89999999999999999999999999999


Q ss_pred             eeccCCCcceeeccccCcCCCCcccccc------CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCc
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELART------GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV  569 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~  569 (670)
                      +......  ......||+.|+|||++.+      ..++.++||||+||+++||++|+.||.........   .....+..
T Consensus       158 ~~~~~~~--~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~---~~i~~~~~  232 (277)
T d1phka_         158 CQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML---RMIMSGNY  232 (277)
T ss_dssp             EECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHTCC
T ss_pred             eEccCCC--ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHH---HHHHhCCC
Confidence            9776543  2344689999999998863      35688999999999999999999999875432211   11111111


Q ss_pred             ccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                            ...........+.+.+++.+||++||.+|||++|+++|
T Consensus       233 ------~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         233 ------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             ------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             ------CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                  11111122334568889999999999999999999876

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-44  Score=374.30  Aligned_cols=242  Identities=24%  Similarity=0.395  Sum_probs=197.2

Q ss_pred             hcCccccceEeeeCceeEEEeeccc----------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCee
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT----------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDL  418 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~----------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~  418 (670)
                      .++|+..++||+|+||+||+|.+..                      ....|.+|++++++++||||++++|+|...+..
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            3678889999999999999987531                      234688999999999999999999999999999


Q ss_pred             EEEEeccCCCCchhhcccCC--------ccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEE
Q 035655          419 LLVYDYIPNGSLDSLLFDNE--------NFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLG  490 (670)
Q Consensus       419 ~lV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~  490 (670)
                      ++||||+++|+|.+++....        ...+++..+.+++.|+|+||.|||+   ++|+||||||+|||+++++++||+
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEEC
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceEEEe
Confidence            99999999999999986432        2357999999999999999999998   899999999999999999999999


Q ss_pred             eecCceeccCCCcc-eeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCC-CCCCCCcchhHHHHHHHhhcCC
Q 035655          491 DFGLARLFDHGKIS-HTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGR-RPIDSDHFILVDWVLEFQHLGQ  568 (670)
Q Consensus       491 DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~-~pf~~~~~~~~~~~~~~~~~~~  568 (670)
                      |||+++........ ......||+.|+|||.+.++.++.++|||||||++|||+||+ .||.....  .+.... ...+.
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~--~~~~~~-i~~~~  252 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVLRF-VMEGG  252 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--HHHHHH-HHTTC
T ss_pred             ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCH--HHHHHH-HHhCC
Confidence            99999876543322 223347899999999999999999999999999999999985 66654322  111111 11222


Q ss_pred             cccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcCC
Q 035655          569 VLDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNGD  617 (670)
Q Consensus       569 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  617 (670)
                      ...         .+......+.+++.+||+.+|.+|||++||+++|++.
T Consensus       253 ~~~---------~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         253 LLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             CCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             CCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            111         1112235688999999999999999999999999865

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.4e-43  Score=360.30  Aligned_cols=241  Identities=23%  Similarity=0.330  Sum_probs=187.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC----e
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR----D  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~----~  417 (670)
                      .++|++.+.||+|+||.||+|+...                   ..+.|.+|+++|++++||||+++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            3679999999999999999997642                   2346889999999999999999999987654    3


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .|+||||+++|+|.+++...  ..+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++..+|+|||.++.
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~  160 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARA  160 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred             EEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhhhh
Confidence            89999999999999998654  369999999999999999999998   9999999999999999999999999999976


Q ss_pred             ccCCCc--ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCC
Q 035655          498 FDHGKI--SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDP  575 (670)
Q Consensus       498 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~  575 (670)
                      ......  .......||+.|||||++.+..++.++|||||||++|||+||+.||.......  ............     
T Consensus       161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--~~~~~~~~~~~~-----  233 (277)
T d1o6ya_         161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS--VAYQHVREDPIP-----  233 (277)
T ss_dssp             CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHCCCCC-----
T ss_pred             hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHH--HHHHHHhcCCCC-----
Confidence            544322  23345689999999999999999999999999999999999999998643221  111111111110     


Q ss_pred             CCCCcccHHHHHHHHHHHHhhccCCCCCCC-CHHHHHHHhc
Q 035655          576 NLGSSYVVAEMELVLQLGLLCSHQKAEARP-TMRQVLRYLN  615 (670)
Q Consensus       576 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~  615 (670)
                        .........+.+.+++.+||++||.+|| +++++++.|.
T Consensus       234 --~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~  272 (277)
T d1o6ya_         234 --PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV  272 (277)
T ss_dssp             --GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             --CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence              0111112235678899999999999999 8999988765

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.3e-43  Score=372.66  Aligned_cols=230  Identities=25%  Similarity=0.273  Sum_probs=193.6

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVY  422 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~  422 (670)
                      ++|++.+.||+|+||.||+|+...                   ..+.+.+|+++|++++||||+++++++.+....++|+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            579999999999999999998643                   2346789999999999999999999999999999999


Q ss_pred             eccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCC
Q 035655          423 DYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGK  502 (670)
Q Consensus       423 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~  502 (670)
                      ||+.+|+|.+++.+..  .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|+..... 
T Consensus       121 e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~-  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred             ccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeecccc-
Confidence            9999999999996543  59999999999999999999998   89999999999999999999999999999876542 


Q ss_pred             cceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCccc
Q 035655          503 ISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYV  582 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~  582 (670)
                         .....||+.|||||++.+..++.++|||||||++|||++|+.||........  ... ...+.      +....   
T Consensus       195 ---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~-i~~~~------~~~p~---  259 (350)
T d1rdqe_         195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI--YEK-IVSGK------VRFPS---  259 (350)
T ss_dssp             ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-HHHCC------CCCCT---
T ss_pred             ---cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH--HHH-HhcCC------CCCCc---
Confidence               3346899999999999999999999999999999999999999986442211  111 11111      11111   


Q ss_pred             HHHHHHHHHHHHhhccCCCCCC-----CCHHHHHHH
Q 035655          583 VAEMELVLQLGLLCSHQKAEAR-----PTMRQVLRY  613 (670)
Q Consensus       583 ~~~~~~l~~l~~~Cl~~dP~~R-----Ps~~evl~~  613 (670)
                       .....+.+++..||+.||.+|     |+++++++|
T Consensus       260 -~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         260 -HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             -TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -cCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence             123457789999999999999     489999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=365.20  Aligned_cols=238  Identities=18%  Similarity=0.283  Sum_probs=195.4

Q ss_pred             hcCccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|.+.+.||+|+||+||+|+...               ....+.+|+++|++++||||+++++++.+.+.+|+|||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            3578999999999999999998753               2346789999999999999999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC--CcEEEEeecCceeccCCCc
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD--MNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~--~~~kL~DFGla~~~~~~~~  503 (670)
                      ++|+|.++|.... ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.+  ..+||+|||+++...... 
T Consensus        84 ~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~-  158 (321)
T d1tkia_          84 SGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-  158 (321)
T ss_dssp             CCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhccccCC-
Confidence            9999999996543 369999999999999999999998   999999999999999854  489999999998765433 


Q ss_pred             ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcccH
Q 035655          504 SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSYVV  583 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~  583 (670)
                       ......+|+.|+|||.+.+..++.++||||+||++|||++|+.||.......  ....... ..      ..+......
T Consensus       159 -~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~--~~~~i~~-~~------~~~~~~~~~  228 (321)
T d1tkia_         159 -NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ--IIENIMN-AE------YTFDEEAFK  228 (321)
T ss_dssp             -EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHH-TC------CCCCHHHHT
T ss_pred             -cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh-CC------CCCChhhcc
Confidence             3344679999999999999999999999999999999999999998644221  1111111 11      011111111


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          584 AEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       584 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      .....+.+++..||+.||.+|||++|+++|
T Consensus       229 ~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         229 EISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            223567889999999999999999999985

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-43  Score=363.76  Aligned_cols=246  Identities=27%  Similarity=0.348  Sum_probs=191.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|++.++||+|+||+||+|++..                  ..+.+.+|+++|++++|||||++++++.+++..++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            579999999999999999998643                  24578899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      |+.+ ++.+++.......+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+...... 
T Consensus        82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~-  156 (298)
T d1gz8a_          82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-  156 (298)
T ss_dssp             CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred             ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCCc-
Confidence            9965 55555555545679999999999999999999998   899999999999999999999999999998765433 


Q ss_pred             ceeeccccCcCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccccc------CC-
Q 035655          504 SHTTNVVGTIGYIAPELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVV------DP-  575 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~------d~-  575 (670)
                      .......||+.|+|||.+.... ++.++||||+||++|||++|+.||........-+. .....+...+..      .+ 
T Consensus       157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~  235 (298)
T d1gz8a_         157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGTPDEVVWPGVTSMPD  235 (298)
T ss_dssp             BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCCCCTTTSTTGGGSTT
T ss_pred             ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHH-HHHhcCCCchhhccccccccc
Confidence            2234458999999999877655 57899999999999999999999986432211110 000000000000      00 


Q ss_pred             ------CC-CCcc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          576 ------NL-GSSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       576 ------~l-~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                            .. ....   .......+.+++.+||+.||.+|||++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence                  00 0000   01123567889999999999999999999997

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-43  Score=368.27  Aligned_cols=233  Identities=24%  Similarity=0.359  Sum_probs=191.7

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHh-ccccCceeeeeeeeeccCeeEEE
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLG-RLRHKHLVNLQGWCKRKRDLLLV  421 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~-~l~H~nIv~l~g~~~~~~~~~lV  421 (670)
                      ++|...+.||+|+||+||+|+...                   ..+.+..|..++. .++||||+++++++.+++..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            578999999999999999998743                   1235667777765 68999999999999999999999


Q ss_pred             EeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCC
Q 035655          422 YDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHG  501 (670)
Q Consensus       422 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~  501 (670)
                      |||+++|+|.+++....  .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+++.....
T Consensus        82 mEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~  156 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  156 (320)
T ss_dssp             EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhcccc
Confidence            99999999999997543  58999999999999999999999   89999999999999999999999999999865543


Q ss_pred             CcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccCCCCCCcc
Q 035655          502 KISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVDPNLGSSY  581 (670)
Q Consensus       502 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~  581 (670)
                      . ...+...||+.|+|||++.+..++.++|||||||++|||++|+.||........   ......+      .+.+..  
T Consensus       157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~---~~~i~~~------~~~~p~--  224 (320)
T d1xjda_         157 D-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL---FHSIRMD------NPFYPR--  224 (320)
T ss_dssp             T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHC------CCCCCT--
T ss_pred             c-ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHH---HHHHHcC------CCCCCc--
Confidence            2 334456899999999999999999999999999999999999999986443211   1111111      112211  


Q ss_pred             cHHHHHHHHHHHHhhccCCCCCCCCHH-HHHHH
Q 035655          582 VVAEMELVLQLGLLCSHQKAEARPTMR-QVLRY  613 (670)
Q Consensus       582 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~  613 (670)
                        .....+.+++.+||+.||.+||++. |+++|
T Consensus       225 --~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h  255 (320)
T d1xjda_         225 --WLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  255 (320)
T ss_dssp             --TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             --cCCHHHHHHHHHhcccCCCCCcCHHHHHHhC
Confidence              2234578899999999999999996 77653

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-42  Score=360.65  Aligned_cols=242  Identities=26%  Similarity=0.277  Sum_probs=187.2

Q ss_pred             ccceEeeeCceeEEEeeccch---------------------HHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          366 QSEVIGTGGFGEVYKGVLPTR---------------------MREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       366 ~~~~lG~G~fg~Vykg~~~~~---------------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ..++||+|+||+||+|++...                     .+.+.+|+++|++++|||||++++++..++..++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            357899999999999986431                     23578999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      ++++++..++..  ...+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++....... 
T Consensus        82 ~~~~~~~~~~~~--~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~-  155 (299)
T d1ua2a_          82 METDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-  155 (299)
T ss_dssp             CSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-
T ss_pred             hcchHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCcc-
Confidence            998887776643  3468999999999999999999999   9999999999999999999999999999986654332 


Q ss_pred             eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc---CCc---ccccCCC
Q 035655          505 HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL---GQV---LDVVDPN  576 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~---~~~---~~~~d~~  576 (670)
                      ......||+.|+|||++... .++.++|||||||++|||++|+.||...... ...........   ...   .......
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~  235 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV  235 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred             cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhh
Confidence            23345799999999988654 5799999999999999999999999764321 11111111000   000   0000000


Q ss_pred             ---CCCccc-----HHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          577 ---LGSSYV-----VAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       577 ---l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                         .....+     ....+.+.+++.+||+.||++|||++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence               000011     1123568899999999999999999999986

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-43  Score=358.75  Aligned_cols=225  Identities=24%  Similarity=0.382  Sum_probs=185.8

Q ss_pred             cCccccceEeeeCceeEEEeeccch----------------------HHHHHHHHHHHhccc--cCceeeeeeeeeccCe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPTR----------------------MREFAAEIESLGRLR--HKHLVNLQGWCKRKRD  417 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~~----------------------~~~f~~Ei~~L~~l~--H~nIv~l~g~~~~~~~  417 (670)
                      ++|++.++||+|+||+||+|+...+                      ...+.+|+.+|++++  ||||+++++++.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5799999999999999999986431                      123568999999997  8999999999999999


Q ss_pred             eEEEEeccCC-CCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCC-CcEEEEeecCc
Q 035655          418 LLLVYDYIPN-GSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDAD-MNARLGDFGLA  495 (670)
Q Consensus       418 ~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~-~~~kL~DFGla  495 (670)
                      .++||||+.+ +++.+++..+  ..+++.++..++.||++||+|||+   ++|+||||||+|||++.+ +.+||+|||++
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DFG~a  158 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSG  158 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECccccc
Confidence            9999999976 5777877554  469999999999999999999999   999999999999999854 79999999999


Q ss_pred             eeccCCCcceeeccccCcCCCCccccccCCC-CccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCcccccC
Q 035655          496 RLFDHGKISHTTNVVGTIGYIAPELARTGKA-SCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       496 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~d  574 (670)
                      +.....   ..+...||+.|+|||++.+..+ +.++|||||||++|||++|+.||......        . ...      
T Consensus       159 ~~~~~~---~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i--------~-~~~------  220 (273)
T d1xwsa_         159 ALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI--------I-RGQ------  220 (273)
T ss_dssp             EECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--------H-HCC------
T ss_pred             eecccc---cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHH--------h-hcc------
Confidence            876543   2345689999999999987765 56799999999999999999999753210        0 011      


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ..+...+    ...+.+++.+||+.||.+|||++|+++|
T Consensus       221 ~~~~~~~----s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         221 VFFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             CCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cCCCCCC----CHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            0111122    2567889999999999999999999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1e-41  Score=352.20  Aligned_cols=246  Identities=24%  Similarity=0.285  Sum_probs=188.4

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEec
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYDY  424 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E~  424 (670)
                      ++|+..++||+|+||+||+|+++.                 ..+.+.+|+.+|++++||||+++++++...+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            578999999999999999998653                 135789999999999999999999999999999999999


Q ss_pred             cCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCcc
Q 035655          425 IPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       425 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~~  504 (670)
                      +.++.+..+....  ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++....... .
T Consensus        82 ~~~~~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~-~  155 (286)
T d1ob3a_          82 LDQDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-R  155 (286)
T ss_dssp             CSEEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             ehhhhHHHHHhhc--CCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccCc-c
Confidence            9887777776443  469999999999999999999998   899999999999999999999999999998765432 2


Q ss_pred             eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHHhhc------------CCcc
Q 035655          505 HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEFQHL------------GQVL  570 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~~~~------------~~~~  570 (670)
                      ......|++.|+|||.+.+. .++.++|||||||+++||++|+.||....... ..........            .+..
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T d1ob3a_         156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD  235 (286)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcc
Confidence            23345789999999988754 56899999999999999999999997643211 1111110000            0000


Q ss_pred             ccc---CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 DVV---DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ~~~---d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ...   .+.............+.+++.+||+.||++|||++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            000   0000011112223567899999999999999999999975

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-42  Score=357.01  Aligned_cols=247  Identities=23%  Similarity=0.319  Sum_probs=188.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-------------------hHHHHHHHHHHHhcc---ccCceeeeeeeeec----
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-------------------RMREFAAEIESLGRL---RHKHLVNLQGWCKR----  414 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-------------------~~~~f~~Ei~~L~~l---~H~nIv~l~g~~~~----  414 (670)
                      .++|++.++||+|+||+||+|++..                   ....+.+|+.+|+.|   +||||++++++|..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            4689999999999999999998632                   123466888887776   79999999999853    


Q ss_pred             -cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeec
Q 035655          415 -KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFG  493 (670)
Q Consensus       415 -~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFG  493 (670)
                       ....++++||++++++..... .....+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~dfg  161 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFG  161 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             cCceEEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecchh
Confidence             356899999998877655443 334568999999999999999999999   899999999999999999999999999


Q ss_pred             CceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHHHHHHhhc-C----
Q 035655          494 LARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDWVLEFQHL-G----  567 (670)
Q Consensus       494 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~~~~~~~~-~----  567 (670)
                      +++.....  .......||+.|+|||++.+.+++.++||||+||++|||++|+.||...... ........... .    
T Consensus       162 ~~~~~~~~--~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  239 (305)
T d1blxa_         162 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  239 (305)
T ss_dssp             SCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             hhhhhccc--ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcc
Confidence            99865432  2334568999999999999999999999999999999999999999864321 11111111000 0    


Q ss_pred             ----Cccccc----CCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          568 ----QVLDVV----DPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       568 ----~~~~~~----d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                          ......    .+.....+.....+.+.+|+.+||+.||.+|||++|+++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                000000    0000011122233567789999999999999999999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-40  Score=342.71  Aligned_cols=248  Identities=27%  Similarity=0.333  Sum_probs=187.7

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec--------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR--------  414 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~--------  414 (670)
                      -++|++.++||+|+||+||+|++..                  ..+.+.+|+++|++++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            3679999999999999999998643                  23568899999999999999999999855        


Q ss_pred             cCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecC
Q 035655          415 KRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGL  494 (670)
Q Consensus       415 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGl  494 (670)
                      .+..++||||++++.+..+...  ...++...+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~--~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCT--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             CceEEEEEeccCCCccchhhhc--ccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeecce
Confidence            3468999999988877766533  3468899999999999999999998   9999999999999999999999999999


Q ss_pred             ceeccCCCc---ceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-HHHHHHhhcCCc
Q 035655          495 ARLFDHGKI---SHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-DWVLEFQHLGQV  569 (670)
Q Consensus       495 a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~~~~~~~~~~~~  569 (670)
                      ++.......   .......||+.|+|||++.+. .++.++||||+||+++||++|+.||........ ......  .+..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~--~~~~  241 (318)
T d3blha1         164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL--CGSI  241 (318)
T ss_dssp             CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH--HCCC
T ss_pred             eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHh--cCCC
Confidence            987654332   122335799999999998765 689999999999999999999999976432111 111111  1111


Q ss_pred             ccccCCCC-------------CCcc-cHH------HHHHHHHHHHhhccCCCCCCCCHHHHHHHhc
Q 035655          570 LDVVDPNL-------------GSSY-VVA------EMELVLQLGLLCSHQKAEARPTMRQVLRYLN  615 (670)
Q Consensus       570 ~~~~d~~l-------------~~~~-~~~------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  615 (670)
                      ........             .... ...      ....+++|+.+||+.||++|||++|+++|=.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf  307 (318)
T d3blha1         242 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF  307 (318)
T ss_dssp             CTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             ChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence            00000000             0000 011      1235678999999999999999999999744

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-40  Score=347.76  Aligned_cols=240  Identities=24%  Similarity=0.336  Sum_probs=180.9

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccC------
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR------  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~------  416 (670)
                      .++|+..++||+|+||+||+|.+..                  ..+.+.+|+++|++++|||||+++++|...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            4689999999999999999998643                  2356789999999999999999999997654      


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      .+++||||+ +.+|..++..   ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~  169 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR  169 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             eEEEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhccccccccccccccee
Confidence            579999999 5677776643   359999999999999999999998   999999999999999999999999999998


Q ss_pred             eccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCc------
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQV------  569 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~------  569 (670)
                      .....    .+...||+.|+|||++.+. .++.++||||+||+++||++|+.||............. ...+..      
T Consensus       170 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~  244 (346)
T d1cm8a_         170 QADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM-KVTGTPPAEFVQ  244 (346)
T ss_dssp             ECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HHHCCCCHHHHH
T ss_pred             ccCCc----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHH-hccCCCcHHHHh
Confidence            76543    3456799999999988764 56899999999999999999999997643211110000 000000      


Q ss_pred             ----------ccccCCCCC----CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          570 ----------LDVVDPNLG----SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       570 ----------~~~~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                                ... .+...    ..........+.+|+.+||+.||.+|||++|+++|
T Consensus       245 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         245 RLQSDEAKNYMKG-LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             TCSCHHHHHHHHH-SCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhcchhhhhhhcc-CCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                      000 00000    00111122456789999999999999999999997

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-39  Score=346.37  Aligned_cols=247  Identities=22%  Similarity=0.270  Sum_probs=184.3

Q ss_pred             hcCccccceEeeeCceeEEEeeccc-----------------hHHHHHHHHHHHhccccCceeeeeeeeeccC----eeE
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT-----------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKR----DLL  419 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~-----------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~----~~~  419 (670)
                      +.+|+..++||+|+||+||+|+...                 ..+.+.+|+++|++++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            4679999999999999999997643                 2357889999999999999999999987543    334


Q ss_pred             EEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceecc
Q 035655          420 LVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFD  499 (670)
Q Consensus       420 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~  499 (670)
                      ++++|+.+|+|.+++...   .+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        87 ~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~  160 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  160 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceeecc
Confidence            555667799999999643   58999999999999999999998   999999999999999999999999999998764


Q ss_pred             CCCc--ceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHhhcCCccc-----
Q 035655          500 HGKI--SHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQHLGQVLD-----  571 (670)
Q Consensus       500 ~~~~--~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~~~~~~~~-----  571 (670)
                      ....  .......||+.|+|||++.. ..++.++||||+||+++||++|+.||.........+............     
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (345)
T d1pmea_         161 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI  240 (345)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTC
T ss_pred             CCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhh
Confidence            4322  12344679999999998854 567899999999999999999999997643221111110000000000     


Q ss_pred             ---------ccCCCCC-Ccc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          572 ---------VVDPNLG-SSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       572 ---------~~d~~l~-~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                               ...+... ..+   .......+.+++..||+.||.+|||++|+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         241 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                     0000000 000   01112457889999999999999999999997

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-40  Score=349.92  Aligned_cols=246  Identities=23%  Similarity=0.278  Sum_probs=182.9

Q ss_pred             CccccceEeeeCceeEEEeeccch------------HHHHHHHHHHHhccccCceeeeeeeeecc------CeeEEEEec
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPTR------------MREFAAEIESLGRLRHKHLVNLQGWCKRK------RDLLLVYDY  424 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~~------------~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~------~~~~lV~E~  424 (670)
                      +|+..++||+|+||+||+|++...            ...+.+|+++|++++||||++++++|...      ..+++||||
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey  100 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  100 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEEC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEec
Confidence            577889999999999999987542            22345899999999999999999998543      347999999


Q ss_pred             cCCCCchhhccc-CCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceeccCCC
Q 035655          425 IPNGSLDSLLFD-NENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFDHGK  502 (670)
Q Consensus       425 ~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~~~  502 (670)
                      ++++.+...... .....+++.++..++.||+.||+|||+   ++|+||||||+|||++.++ .+||+|||+++......
T Consensus       101 ~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~  177 (350)
T d1q5ka_         101 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE  177 (350)
T ss_dssp             CSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS
T ss_pred             cCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhccCCc
Confidence            986644443321 234469999999999999999999998   9999999999999999875 89999999998775543


Q ss_pred             cceeeccccCcCCCCcccccc-CCCCccchhHHHHHHHHHHHhCCCCCCCCcchh-HHHHHHH----------hhcCCcc
Q 035655          503 ISHTTNVVGTIGYIAPELART-GKASCSTDVFAYGVLLLEIATGRRPIDSDHFIL-VDWVLEF----------QHLGQVL  570 (670)
Q Consensus       503 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~-~~~~~~~----------~~~~~~~  570 (670)
                        ......||..|+|||.+.+ ..++.++||||+||+++||++|+.||....... .......          .......
T Consensus       178 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~  255 (350)
T d1q5ka_         178 --PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT  255 (350)
T ss_dssp             --CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred             --ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence              2334579999999998765 568999999999999999999999997643211 1000000          0000000


Q ss_pred             cccCCCCC-----CcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          571 DVVDPNLG-----SSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       571 ~~~d~~l~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                      ...-+...     ..........+.+|+.+||+.||.+|||++|+++|
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            10001110     01111223567889999999999999999999986

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-39  Score=337.93  Aligned_cols=242  Identities=17%  Similarity=0.238  Sum_probs=184.5

Q ss_pred             cCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhccccCceeee-eeeeeccCeeEEEEeccC
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRHKHLVNL-QGWCKRKRDLLLVYDYIP  426 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H~nIv~l-~g~~~~~~~~~lV~E~~~  426 (670)
                      ++|+..+.||+|+||.||+|++..              ..+++..|++++++++|+|++.. .+++.+.+..++||||+ 
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-   85 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-   85 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-
Confidence            469999999999999999998643              23568899999999988765555 45556778899999999 


Q ss_pred             CCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEec---CCCcEEEEeecCceeccCCCc
Q 035655          427 NGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLID---ADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       427 ~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld---~~~~~kL~DFGla~~~~~~~~  503 (670)
                      +++|.+.+.... ..+++..+..++.|++.||+|||+   ++|+||||||+|||++   .+..+||+|||+|+.......
T Consensus        86 ~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (299)
T d1ckia_          86 GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  161 (299)
T ss_dssp             CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred             CCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence            567766665443 469999999999999999999999   9999999999999985   455799999999998765332


Q ss_pred             ------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHHhh--cCCcccccC
Q 035655          504 ------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW-VLEFQH--LGQVLDVVD  574 (670)
Q Consensus       504 ------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~-~~~~~~--~~~~~~~~d  574 (670)
                            .......||+.|||||.+.+..++.++|||||||+++||++|+.||.......... ......  .........
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (299)
T d1ckia_         162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC  241 (299)
T ss_dssp             CCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHT
T ss_pred             ccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhc
Confidence                  12345689999999999999999999999999999999999999997632211111 111000  000001111


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      +        ..+..+.+++..||+.+|.+||+++++.+.|+.
T Consensus       242 ~--------~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  275 (299)
T d1ckia_         242 K--------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  275 (299)
T ss_dssp             T--------TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHH
T ss_pred             c--------CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            1        123567889999999999999999988777653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-40  Score=344.88  Aligned_cols=237  Identities=25%  Similarity=0.336  Sum_probs=191.3

Q ss_pred             cCccccceEeeeCceeEEEeeccc-----------------------hHHHHHHHHHHHhcccc-CceeeeeeeeeccCe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-----------------------RMREFAAEIESLGRLRH-KHLVNLQGWCKRKRD  417 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-----------------------~~~~f~~Ei~~L~~l~H-~nIv~l~g~~~~~~~  417 (670)
                      ++|+..+.||+|+||+||+|....                       ..+.+.+|+++|++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            569999999999999999996411                       13457799999999987 899999999999999


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++|+||+.+|+|.+++....  .++......++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~  178 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE  178 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred             eeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccchhh
Confidence            999999999999999996654  47788999999999999999998   8999999999999999999999999999987


Q ss_pred             ccCCCcceeeccccCcCCCCccccccC--CCCccchhHHHHHHHHHHHhCCCCCCCCcc-hhHHHHHHHhhcCCcccccC
Q 035655          498 FDHGKISHTTNVVGTIGYIAPELARTG--KASCSTDVFAYGVLLLEIATGRRPIDSDHF-ILVDWVLEFQHLGQVLDVVD  574 (670)
Q Consensus       498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~-~~~~~~~~~~~~~~~~~~~d  574 (670)
                      .............|++.|+|||.+.+.  .++.++|||||||++|||++|+.||..... .............      .
T Consensus       179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~------~  252 (322)
T d1vzoa_         179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS------E  252 (322)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC------C
T ss_pred             hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC------C
Confidence            765544445567899999999998754  468899999999999999999999976322 1111111111111      1


Q ss_pred             CCCCCcccHHHHHHHHHHHHhhccCCCCCCC-----CHHHHHHH
Q 035655          575 PNLGSSYVVAEMELVLQLGLLCSHQKAEARP-----TMRQVLRY  613 (670)
Q Consensus       575 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  613 (670)
                      +.+    +......+.+++..||++||.+||     +++|+++|
T Consensus       253 ~~~----~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         253 PPY----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             CCC----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             CCC----cccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence            111    122346678899999999999999     48899875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.9e-39  Score=335.04  Aligned_cols=242  Identities=19%  Similarity=0.208  Sum_probs=193.1

Q ss_pred             hcCccccceEeeeCceeEEEeeccc--------------hHHHHHHHHHHHhcccc-CceeeeeeeeeccCeeEEEEecc
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT--------------RMREFAAEIESLGRLRH-KHLVNLQGWCKRKRDLLLVYDYI  425 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~--------------~~~~f~~Ei~~L~~l~H-~nIv~l~g~~~~~~~~~lV~E~~  425 (670)
                      .++|++.++||+|+||+||+|++..              ....+.+|++.++.|+| +|++.+++++.++...++||||+
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            3579999999999999999998643              23457889999999976 89999999999999999999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecC-----CCcEEEEeecCceeccC
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDA-----DMNARLGDFGLARLFDH  500 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~-----~~~~kL~DFGla~~~~~  500 (670)
                       +++|.+++.... ..+++.++..++.|++.||+|||+   ++|+||||||+|||++.     ++.+||+|||+|+....
T Consensus        84 -~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_          84 -GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             -CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             -CCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence             789999986554 369999999999999999999999   99999999999999974     57899999999998754


Q ss_pred             CCc------ceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch-hHHH---HHHHhhcCCcc
Q 035655          501 GKI------SHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI-LVDW---VLEFQHLGQVL  570 (670)
Q Consensus       501 ~~~------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~-~~~~---~~~~~~~~~~~  570 (670)
                      ...      .......||+.|||||.+.+..++.++|||||||+++||++|+.||...... ....   +......... 
T Consensus       159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~-  237 (293)
T d1csna_         159 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-  237 (293)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-
T ss_pred             CccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh-
Confidence            321      1233468999999999999999999999999999999999999999753221 1111   1111111111 


Q ss_pred             cccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHhcC
Q 035655          571 DVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYLNG  616 (670)
Q Consensus       571 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  616 (670)
                      ..+.+    .+    ++.+.+++..|++.+|.+||+++.+.+.|+.
T Consensus       238 ~~l~~----~~----p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~  275 (293)
T d1csna_         238 RELCA----GF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSK  275 (293)
T ss_dssp             HHHTT----TS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             HHhcC----CC----CHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence            11111    12    2457788899999999999999988887753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3e-39  Score=340.32  Aligned_cols=242  Identities=23%  Similarity=0.297  Sum_probs=187.7

Q ss_pred             cCccccceEeeeCceeEEEeeccc-------------hHHHHHHHHHHHhccc-cCceeeeeeeeec--cCeeEEEEecc
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT-------------RMREFAAEIESLGRLR-HKHLVNLQGWCKR--KRDLLLVYDYI  425 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~-------------~~~~f~~Ei~~L~~l~-H~nIv~l~g~~~~--~~~~~lV~E~~  425 (670)
                      ++|++.++||+|+||+||+|+...             ..+.+.+|+++|++++ ||||+++++++..  ...+++||||+
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~  114 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  114 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeec
Confidence            579999999999999999998643             3567889999999996 9999999999874  35689999999


Q ss_pred             CCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCC-cEEEEeecCceeccCCCcc
Q 035655          426 PNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADM-NARLGDFGLARLFDHGKIS  504 (670)
Q Consensus       426 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~-~~kL~DFGla~~~~~~~~~  504 (670)
                      ++++|..+.     ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++ .+||+|||+++......  
T Consensus       115 ~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~--  184 (328)
T d3bqca1         115 NNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--  184 (328)
T ss_dssp             CSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC--
T ss_pred             CCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceeccCCC--
Confidence            999998774     358999999999999999999999   9999999999999998765 68999999998765543  


Q ss_pred             eeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHHHHHHh-----------h---cC--
Q 035655          505 HTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDWVLEFQ-----------H---LG--  567 (670)
Q Consensus       505 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~~~~~~-----------~---~~--  567 (670)
                      ......+|+.|+|||.+.+. .++.++||||+||+++||++|+.||.........+.....           .   ..  
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  264 (328)
T d3bqca1         185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  264 (328)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccC
Confidence            23445789999999998765 4799999999999999999999999764332211111000           0   00  


Q ss_pred             -CcccccCCC--------CCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          568 -QVLDVVDPN--------LGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       568 -~~~~~~d~~--------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                       .........        ............+.+|+.+||+.||.+|||++|+++|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             000000000        0001111223567889999999999999999999985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-39  Score=334.41  Aligned_cols=246  Identities=24%  Similarity=0.272  Sum_probs=192.2

Q ss_pred             cCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeeccCeeEEEEe
Q 035655          362 KGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRKRDLLLVYD  423 (670)
Q Consensus       362 ~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~~~~~lV~E  423 (670)
                      ++|++.++||+|+||+||+|++..                  ..+.+.+|+.+|++++||||++++++|.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            579999999999999999998643                  24678899999999999999999999999999999999


Q ss_pred             ccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCceeccCCCc
Q 035655          424 YIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARLFDHGKI  503 (670)
Q Consensus       424 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~~~~~~~  503 (670)
                      ++.+++|..++...  ..+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||.++.......
T Consensus        82 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~  156 (292)
T d1unla_          82 FCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             CCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS
T ss_pred             eccccccccccccc--cccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCCCc
Confidence            99999998887554  468999999999999999999998   8999999999999999999999999999987755432


Q ss_pred             ceeeccccCcCCCCccccccCC-CCccchhHHHHHHHHHHHhCCCCCCCCcch--hHHHHHHHhhcC---C---cccccC
Q 035655          504 SHTTNVVGTIGYIAPELARTGK-ASCSTDVFAYGVLLLEIATGRRPIDSDHFI--LVDWVLEFQHLG---Q---VLDVVD  574 (670)
Q Consensus       504 ~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--~~~~~~~~~~~~---~---~~~~~d  574 (670)
                       ......++..|+|||.+.... ++.++||||+||+++||++|+.||......  ....+.......   .   .....+
T Consensus       157 -~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (292)
T d1unla_         157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD  235 (292)
T ss_dssp             -CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred             -cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccc
Confidence             233446788999999887665 689999999999999999999997542211  111111111000   0   000000


Q ss_pred             ---------CCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHH
Q 035655          575 ---------PNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRY  613 (670)
Q Consensus       575 ---------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  613 (670)
                               ..............+.+++.+||+.||.+|||++|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                     000011122223567788999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-38  Score=337.62  Aligned_cols=243  Identities=20%  Similarity=0.219  Sum_probs=179.8

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeec------cC
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKR------KR  416 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~------~~  416 (670)
                      .++|++.++||+|+||+||+|++..                  ..+.+.+|+.+|++++||||+++++++..      ..
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            4689999999999999999998653                  23457899999999999999999999863      36


Q ss_pred             eeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          417 DLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       417 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      .+|+||||+.++.+.. +.    ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+|++|||+++
T Consensus        96 ~~~iv~Ey~~~~l~~~-~~----~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~~  167 (355)
T d2b1pa1          96 DVYLVMELMDANLCQV-IQ----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_dssp             EEEEEEECCSEEHHHH-HT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             eeEEEEeccchHHHHh-hh----cCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhhh
Confidence            7899999997655544 32    358999999999999999999999   999999999999999999999999999988


Q ss_pred             eccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcchhHHH-HHH-------------
Q 035655          497 LFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFILVDW-VLE-------------  562 (670)
Q Consensus       497 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~~~-~~~-------------  562 (670)
                      ......  ......||+.|+|||++.+..++.++||||+||+++||++|+.||.......... ...             
T Consensus       168 ~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (355)
T d2b1pa1         168 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL  245 (355)
T ss_dssp             ---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTS
T ss_pred             cccccc--ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHh
Confidence            665432  3345579999999999999999999999999999999999999997643221110 000             


Q ss_pred             ------HhhcC-Cc---------ccccCCCCCCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          563 ------FQHLG-QV---------LDVVDPNLGSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       563 ------~~~~~-~~---------~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                            ..... ..         ..... .............+.+++.+||+.||++|||++|+++|=
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hp  312 (355)
T d2b1pa1         246 QPTVRNYVENRPKYAGLTFPKLFPDSLF-PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP  312 (355)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHSCGGGS-CCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred             hhhHHHHhhcCccccccccccccccccc-cccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCc
Confidence                  00000 00         00000 011122334566788999999999999999999999873

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-38  Score=332.82  Aligned_cols=243  Identities=21%  Similarity=0.305  Sum_probs=183.0

Q ss_pred             hcCccccceEeeeCceeEEEeeccc------------------hHHHHHHHHHHHhccccCceeeeeeeeecc-----Ce
Q 035655          361 TKGFKQSEVIGTGGFGEVYKGVLPT------------------RMREFAAEIESLGRLRHKHLVNLQGWCKRK-----RD  417 (670)
Q Consensus       361 t~~f~~~~~lG~G~fg~Vykg~~~~------------------~~~~f~~Ei~~L~~l~H~nIv~l~g~~~~~-----~~  417 (670)
                      +++|+..++||+|+||+||+|+...                  ..+.+.+|+++|++++||||+++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            5689999999999999999997643                  234678999999999999999999998633     34


Q ss_pred             eEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          418 LLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       418 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      .++++||+.+|+|.+++..   ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+|++|||++..
T Consensus        97 ~~~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~~  170 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH  170 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----C
T ss_pred             eEEEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchhcc
Confidence            5677788889999999854   359999999999999999999998   8999999999999999999999999999975


Q ss_pred             ccCCCcceeeccccCcCCCCccccccC-CCCccchhHHHHHHHHHHHhCCCCCCCCcchhH-HHHHHHhhcCCccccc--
Q 035655          498 FDHGKISHTTNVVGTIGYIAPELARTG-KASCSTDVFAYGVLLLEIATGRRPIDSDHFILV-DWVLEFQHLGQVLDVV--  573 (670)
Q Consensus       498 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~~~-~~~~~~~~~~~~~~~~--  573 (670)
                      ...    ......||+.|+|||...+. .++.++|||||||+++||++|+.||........ ......... ...+..  
T Consensus       171 ~~~----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~-~~~~~~~~  245 (348)
T d2gfsa1         171 TDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT-PGAELLKK  245 (348)
T ss_dssp             CTG----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC-CCHHHHTT
T ss_pred             cCc----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC-CChHHhhh
Confidence            433    23445789999999987665 468899999999999999999999976432211 111110000 000000  


Q ss_pred             ------------CCCCC-Ccc---cHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHh
Q 035655          574 ------------DPNLG-SSY---VVAEMELVLQLGLLCSHQKAEARPTMRQVLRYL  614 (670)
Q Consensus       574 ------------d~~l~-~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  614 (670)
                                  .+... ..+   .......+.+++.+||+.||.+|||++|+++|=
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp  302 (348)
T d2gfsa1         246 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  302 (348)
T ss_dssp             CCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             ccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCH
Confidence                        00000 000   011235678899999999999999999999963

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-33  Score=299.12  Aligned_cols=246  Identities=20%  Similarity=0.233  Sum_probs=180.5

Q ss_pred             CccccceEeeeCceeEEEeeccc---------------hHHHHHHHHHHHhccc-----------cCceeeeeeeeecc-
Q 035655          363 GFKQSEVIGTGGFGEVYKGVLPT---------------RMREFAAEIESLGRLR-----------HKHLVNLQGWCKRK-  415 (670)
Q Consensus       363 ~f~~~~~lG~G~fg~Vykg~~~~---------------~~~~f~~Ei~~L~~l~-----------H~nIv~l~g~~~~~-  415 (670)
                      +|++.++||+|+||+||+|+...               ..+.+.+|++++++++           |+||+++++++... 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~   93 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   93 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence            49999999999999999998643               1356678999998885           57899999988654 


Q ss_pred             -CeeEEEEeccCCCCc-hhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCc------E
Q 035655          416 -RDLLLVYDYIPNGSL-DSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMN------A  487 (670)
Q Consensus       416 -~~~~lV~E~~~~gsL-~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~------~  487 (670)
                       ...+++++++..+.. ...........+++..+..++.||+.||+|||+  ..+|+||||||+|||++.++.      +
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~~  171 (362)
T d1q8ya_          94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQI  171 (362)
T ss_dssp             TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred             ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCccccccee
Confidence             456677776655443 333334445678999999999999999999997  378999999999999987653      9


Q ss_pred             EEEeecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHHHHHHhCCCCCCCCcch--------hHHH
Q 035655          488 RLGDFGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLLLEIATGRRPIDSDHFI--------LVDW  559 (670)
Q Consensus       488 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el~tG~~pf~~~~~~--------~~~~  559 (670)
                      |++|||.+......    .....||+.|+|||++....++.++||||+||+++||++|+.||...+..        +...
T Consensus       172 kl~dfg~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~  247 (362)
T d1q8ya_         172 KIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI  247 (362)
T ss_dssp             EECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHH
T ss_pred             eEeecccccccccc----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHH
Confidence            99999999865432    23457999999999999999999999999999999999999999753211        0111


Q ss_pred             HHHHhh-------c----------CCcccccCCCC----------CCcccHHHHHHHHHHHHhhccCCCCCCCCHHHHHH
Q 035655          560 VLEFQH-------L----------GQVLDVVDPNL----------GSSYVVAEMELVLQLGLLCSHQKAEARPTMRQVLR  612 (670)
Q Consensus       560 ~~~~~~-------~----------~~~~~~~d~~l----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  612 (670)
                      ......       .          ...........          ...........+.+++..|++.||.+|||++|+++
T Consensus       248 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         248 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             HHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             HHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            100000       0          00000000000          11233556778999999999999999999999999


Q ss_pred             Hh
Q 035655          613 YL  614 (670)
Q Consensus       613 ~L  614 (670)
                      |=
T Consensus       328 Hp  329 (362)
T d1q8ya_         328 HP  329 (362)
T ss_dssp             CG
T ss_pred             Cc
Confidence            73

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.97  E-value=1.3e-31  Score=263.81  Aligned_cols=115  Identities=28%  Similarity=0.458  Sum_probs=105.8

Q ss_pred             CCcEEEEEeeecCCCCCCCCCCCCeeEEecCCcccccccccccccCCCccccccCCCCcEEEEEEecCcccEEEEEEeec
Q 035655          144 SNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAYYENGTKEDFTLESGDPVQAWIDYDGVNRLVNVTICPM  223 (670)
Q Consensus       144 ~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~~~~~~~~~~~~~~~~l~~g~~~~a~I~Yd~~~~~l~v~~~~~  223 (670)
                      .|++|||||||++| .++|||++||||||+|++.|.++.+           +++.+|+.++|||+||+.+++|+|++.. 
T Consensus         1 an~ivAVEFDT~~N-~~~~Dp~~nHIgIdvns~~S~~~~~-----------~~l~~G~~~~v~I~Yd~~~~~L~V~~~~-   67 (237)
T d1nlsa_           1 ADTIVAVELDTYPN-TDIGDPSYPHIGIDIKSVRSKKTAK-----------WNMQNGKVGTAHIIYNSVDKRLSAVVSY-   67 (237)
T ss_dssp             CCCEEEEEEECSCC-GGGTCCSSCEEEEEESSSSCSEEEE-----------CCCCTTCEEEEEEEEETTTTEEEEEEEC-
T ss_pred             CCCEEEEEEECCcC-CCCCCCCCCEEEEEeCCCCccceec-----------ccccCCCEEEEEEEEecCCcEEEEEEec-
Confidence            37899999999999 7889999999999999999877654           6788999999999999999999999974 


Q ss_pred             CCcccccccCCCCCCcccccccCCcccccccceeeEeecCCceeeeEEEeccccccCC
Q 035655          224 NKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTGRKVSSHFILGWSFSMNG  281 (670)
Q Consensus       224 ~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsastg~~~~~h~i~sW~fs~~~  281 (670)
                                .+|..|+|++.+||+++|+++||||||||||...|.|+|++|+|+++.
T Consensus        68 ----------~~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~h~I~sWsFsS~~  115 (237)
T d1nlsa_          68 ----------PNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKL  115 (237)
T ss_dssp             ----------TTSCCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEE
T ss_pred             ----------CCCCCeEEEEEEChHHhCCCcEEEEEEeecCCCccceEEEEEEEEeec
Confidence                      456778999999999999999999999999999999999999999764

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=5e-27  Score=233.32  Aligned_cols=214  Identities=14%  Similarity=0.110  Sum_probs=141.3

Q ss_pred             eeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecC
Q 035655           25 EEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTP  104 (670)
Q Consensus        25 ~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~  104 (670)
                      .||+.|.+...+...+-+.+.|+|.+. ++.|+||++..+++|+++|++|+++             .+|+|+|+|.|..+
T Consensus         9 ~sf~~P~~~~~~~~~~~w~~~G~a~i~-~~~i~LT~~~~~~~G~v~~~~p~~~-------------~~F~~~f~f~~~~~   74 (228)
T d1gv9a_           9 YSFKGPHLVQSDGTVPFWAHAGNAIPS-ADQIRIAPSLKSQRGSVWTKTKAAF-------------ENWEVEVTFRVTGR   74 (228)
T ss_dssp             GCEECSSCSCTTSCBTTEEEEETCEEC-SSCEEEECSSTTCEEEEEESSCBCC-------------SSEEEEEEEEEECS
T ss_pred             eccCCCcccCCCCCccceEEeeeEEEE-CCEEEECCCCCCCEEEEEeCCCccc-------------cCcEEEEEEeccCC
Confidence            456655554322221226899999997 8899999999999999999999976             46999999999865


Q ss_pred             CCCCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCccc-ccccc
Q 035655          105 NSGQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKS-IKLEP  183 (670)
Q Consensus       105 ~~~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s-~~~~~  183 (670)
                       ...+||||||++++..    +..|+.+|.       ....+-+||||||+.|   .+|++.+|+.+++|.... ....+
T Consensus        75 -~~~ggdG~aF~i~~~~----~~~g~~~G~-------~~~~~glaVefDt~~n---~~~~~~~~~~~~~n~~~~~~~~~~  139 (228)
T d1gv9a_          75 -GRIGADGLAIWYTENQ----GLDGPVFGS-------ADMWNGVGIFFDSFDN---DGKKNNPAIVVVGNNGQINYDHQN  139 (228)
T ss_dssp             -SSCCCCEEEEEEESSC----CCEEEETTE-------CSCCEEEEEEEECCCC--------CCEEEEEEEESCCCCCHHH
T ss_pred             -CCCCCCEEEEEEecCC----CCCCCccCc-------CCCCceEEEEEEcccc---cCCCCCCcEEEEecCCcceeeecC
Confidence             3578999999999864    245666665       2234568999999988   268888888888874331 11110


Q ss_pred             cccccCCCccccc-cCCCCcEEEEEEecCcccEEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEeec
Q 035655          184 AAYYENGTKEDFT-LESGDPVQAWIDYDGVNRLVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSAS  262 (670)
Q Consensus       184 ~~~~~~~~~~~~~-l~~g~~~~a~I~Yd~~~~~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsas  262 (670)
                      ..+.......... ..++..+++||+|+  .+.|+|++.....        ..+..+.+...+ ....++++||||||||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~l~v~i~~~~~--------~~~~~~~~~~~~-~~~~l~~~~y~GFTAs  208 (228)
T d1gv9a_         140 DGATQALASCQRDFRNKPYPVRAKITYY--QKTLTVMINNGFT--------PDKNDYEFCAKV-ENMVIPTQGHFGISAA  208 (228)
T ss_dssp             HHHHHCSEEECCCCBSCSSCEEEEEEEE--TTEEEEEEECSSC--------CCTTCCEEEEEE-TTCCCCSSBEEEEEEE
T ss_pred             CCccccccceeeeecCCceEEEEEEEec--CCEEEEEEecccc--------CCCcceeEEEEe-cccccCCCEEEEEEEe
Confidence            0000000000111 12345566666665  5778888875443        222222233333 3556889999999999


Q ss_pred             CCceeeeEEEeccccc
Q 035655          263 TGRKVSSHFILGWSFS  278 (670)
Q Consensus       263 tg~~~~~h~i~sW~fs  278 (670)
                      ||...+.|+|++|.+.
T Consensus       209 TG~~~~~H~I~s~~~~  224 (228)
T d1gv9a_         209 TGGLADDHDVLSFLTF  224 (228)
T ss_dssp             CCSSCCEEEEEEEEEE
T ss_pred             CCCCcCeEEEEEEEEE
Confidence            9999999999999874

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.90  E-value=6.1e-25  Score=215.88  Aligned_cols=110  Identities=25%  Similarity=0.502  Sum_probs=95.4

Q ss_pred             ccCCceeEEeCCCCCCCCCccceEEccceeeCCCCcEEecCCC------CCeEEEEEecCceeeecCCCCCCCCCCccce
Q 035655           20 LSQQKEEFIFNGFNETKTNQGLITRERASILKPSGALRLTDNA------HNVIGHAFYNKPIQMLDKSTSLSSKPNASSF   93 (670)
Q Consensus        20 ~~~~~~~f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sF   93 (670)
                      ..++.++|+|++|.+...+   |.++|+|.+.++|.||||+..      ..++|||+|++||+|||. ++     +++||
T Consensus       121 ~esn~~~F~f~~F~~~~~n---l~l~G~A~i~~~G~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~d~-t~-----~~~SF  191 (237)
T d1nlsa_         121 HETNALHFMFNQFSKDQKD---LILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SA-----VVASF  191 (237)
T ss_dssp             SCEEEEEEEESCCCTTCTT---EEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TE-----EEEEE
T ss_pred             cccccceEEeeecCCCCCC---EEEeeeeEecCCCcEEecCCCCCCcccCcceEEEEeCCCEEEECC-CC-----cEeeE
Confidence            3457799999999875567   999999999879999999754      468999999999999995 66     89999


Q ss_pred             eEEEEEEEecCCCCCCCCcEEEEEcCCC-CCCCCCCCcccccccCCC
Q 035655           94 STCFVFQIVTPNSGQGGFGLAFTVSPQP-SFPGGKAEHYLGILNSTN  139 (670)
Q Consensus        94 st~F~f~i~~~~~~~~g~GlaF~l~~~~-~~~~~~~g~~lGl~~~~~  139 (670)
                      +|+|+|.|.+++ ..+||||||||+|.. .+|.++.||||||||.+|
T Consensus       192 sT~F~F~I~~~~-~~~gdG~aF~iap~~~~~p~~~~g~~LGL~n~~n  237 (237)
T d1nlsa_         192 EATFTFLIKSPD-SHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN  237 (237)
T ss_dssp             EEEEEEECCCSS-SSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSCC
T ss_pred             EEEEEEEEecCC-CCCCCCEEEEEeCCCCCCCCCCCCCeeeeccCCC
Confidence            999999998865 468999999999965 578899999999999763

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.79  E-value=4.2e-20  Score=177.56  Aligned_cols=154  Identities=13%  Similarity=0.140  Sum_probs=110.3

Q ss_pred             cccceEeeeCceeEEEeeccch---------------------------------HHHHHHHHHHHhccccCceeeeeee
Q 035655          365 KQSEVIGTGGFGEVYKGVLPTR---------------------------------MREFAAEIESLGRLRHKHLVNLQGW  411 (670)
Q Consensus       365 ~~~~~lG~G~fg~Vykg~~~~~---------------------------------~~~f~~Ei~~L~~l~H~nIv~l~g~  411 (670)
                      .+.++||+|+||.||+|.+.++                                 ......|+..+.++.|.+++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            4578999999999999976431                                 1223468889999999999988765


Q ss_pred             eeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccccccceEEecccCCCcEEecCCCcEEEEe
Q 035655          412 CKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSGNVLIDADMNARLGD  491 (670)
Q Consensus       412 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDIkp~NILld~~~~~kL~D  491 (670)
                      ..    .+++|||+++..+.+         ++.....+++.|++.+|+|||+   .+|+||||||+|||++++ .++|+|
T Consensus        83 ~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~-~~~liD  145 (191)
T d1zara2          83 EG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE-GIWIID  145 (191)
T ss_dssp             ET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT-EEEECC
T ss_pred             cC----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC-CEEEEE
Confidence            32    379999998765543         3444566899999999999998   899999999999999865 589999


Q ss_pred             ecCceeccCCCcceeeccccCcCCCCccccccCCCCccchhHHHHHHH
Q 035655          492 FGLARLFDHGKISHTTNVVGTIGYIAPELARTGKASCSTDVFAYGVLL  539 (670)
Q Consensus       492 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl  539 (670)
                      ||+|....+......  ....... -.|. ...+|..++|+||..--+
T Consensus       146 FG~a~~~~~~~~~~~--l~rd~~~-~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         146 FPQSVEVGEEGWREI--LERDVRN-IITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             CTTCEETTSTTHHHH--HHHHHHH-HHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             CCCcccCCCCCcHHH--HHHHHHH-HHHH-HcCCCCCcccHHHHHHHH
Confidence            999987654331110  0000000 0111 135678899999975444

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=7e-19  Score=172.72  Aligned_cols=200  Identities=15%  Similarity=0.110  Sum_probs=123.2

Q ss_pred             EEeCCCCCCCCCccceEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCC
Q 035655           27 FIFNGFNETKTNQGLITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNS  106 (670)
Q Consensus        27 f~~~~f~~~~~~~~~~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~  106 (670)
                      |++|.+...+.-..-+.+.|+|.+. +|.|+||++ .++.|.+++++|++++            .+|+++|.|+|.... 
T Consensus        10 ~s~p~~~~~~~~~~~W~~~g~a~~~-~~~i~LTp~-~~~~G~~w~~~~i~~~------------~~f~~~~~F~i~g~~-   74 (221)
T d2a6za1          10 YSLPDLINTRKVPNNWQTGEQASLE-EGRIVLTSN-QNSKGSLWLKQGFDLK------------DSFTMEWTFRSVGYS-   74 (221)
T ss_dssp             GCBCCCTTCCSCCTTEEEEETCEEE-TTEEESCCS-TTCEEEEEESSCEECC------------SCEEEEEEEEEESCC-
T ss_pred             ccCCCccccccCCCccEEcceeEEE-CCEEEECCC-CCCceEEEECCccccC------------CCeEEEEEEEEeCCC-
Confidence            6666653322111129999999998 899999987 5788999999999985            259999999998653 


Q ss_pred             CCCCCcEEEEEcCCCCCCCCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCccccccccccc
Q 035655          107 GQGGFGLAFTVSPQPSFPGGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKSIKLEPAAY  186 (670)
Q Consensus       107 ~~~g~GlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s~~~~~~~~  186 (670)
                      ..+||||||++++...  .+..|+++|...       ...-+||||||+.|     +....|+.++.++..-...... .
T Consensus        75 ~~ggdG~af~~~~~~~--~~~~g~~~G~~~-------~~~GlaV~fDt~~n-----~~~~~~~~~ndgt~~~~~~~~~-~  139 (221)
T d2a6za1          75 GQTDGGISFWFVQDSN--IPRDKQLYNGPV-------NYDGLQLLVDNNGP-----LGPTLRGQLNDGQKPVDKTKIY-D  139 (221)
T ss_dssp             SCCSCEEEEEEEECSS--SCCCCTBTTBCT-------TCEEEEEEEESCST-----TSSEEEEEEEESSSCCCGGGHH-H
T ss_pred             CCCCCcEEEEEEcCCC--ccccccccccCC-------CCceEEEEEECCCC-----CCCceEEEecCCCccccccCCc-c
Confidence            4689999999997542  223444555422       22358999999977     2222344444443321111100 0


Q ss_pred             ccCCCccccc-cCCCCcEEEEEEecCccc-EEEEEEeecCCcccccccCCCCCCcccccccCCcccccccceeeEeecCC
Q 035655          187 YENGTKEDFT-LESGDPVQAWIDYDGVNR-LVNVTICPMNKKNKLSFHFGKPSQPLLSLPLDLSPAFQETMYVGFSASTG  264 (670)
Q Consensus       187 ~~~~~~~~~~-l~~g~~~~a~I~Yd~~~~-~l~v~~~~~~~~~~~~~~~~~p~~~~ls~~~dl~~~l~~~~~vGFsastg  264 (670)
                       ......... ..++...+++|.|+..++ .|.|.+..  .             ..+.  ++--.+-++.+|+||||+||
T Consensus       140 -~~~~~~~~~~~~~~~~~~~~I~y~~~~~~~l~v~id~--~-------------~c~~--~~~v~lp~~~~~fG~SA~TG  201 (221)
T d2a6za1         140 -QSFASCLMGYQDSSVPSTIRVTYDLEDDNLLKVQVDN--K-------------VCFQ--TRKVRFPSGSYRIGVTAQNG  201 (221)
T ss_dssp             -HCSEEEECCCTTEEEEEEEEEEEEGGGTSEEEEEETT--E-------------EEEE--ESCCCCCSSEEEEEEEEECC
T ss_pred             -cccceeeecccCCCCCEEEEEEEecCccceEEEEecC--c-------------EeEE--ECCeecCCCCEEEEEEEccC
Confidence             000001122 235777899999987654 47777631  1             0111  11111224678999999999


Q ss_pred             ceeeeEEEec
Q 035655          265 RKVSSHFILG  274 (670)
Q Consensus       265 ~~~~~h~i~s  274 (670)
                      ...+.|++..
T Consensus       202 ~~~~~hd~~~  211 (221)
T d2a6za1         202 AVNNNAESFE  211 (221)
T ss_dssp             SGGGCCCEEE
T ss_pred             CccCCCceEE
Confidence            8777666443

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=2.7e-18  Score=167.91  Aligned_cols=184  Identities=17%  Similarity=0.157  Sum_probs=125.9

Q ss_pred             eEEccceeeCCCCcEEecCCCCCeEEEEEecCceeeecCCCCCCCCCCccceeEEEEEEEecCCCCCCCCcEEEEEcCCC
Q 035655           42 ITRERASILKPSGALRLTDNAHNVIGHAFYNKPIQMLDKSTSLSSKPNASSFSTCFVFQIVTPNSGQGGFGLAFTVSPQP  121 (670)
Q Consensus        42 ~~~~g~a~~~~~~~l~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~sFst~F~f~i~~~~~~~~g~GlaF~l~~~~  121 (670)
                      +.+.|+|.+. +|.|+||++ .++.|+++++.|++++            .+|+++|+|.|... ...+||||||.+.+..
T Consensus        24 W~~~G~~~~~-~~~i~LTp~-~~~~G~~w~~~~i~~~------------~~f~i~~~F~i~g~-~~~~~dG~afw~~~~~   88 (218)
T d2a6va1          24 WTLGDKVKLE-EGRFVLTPG-KNTKGSLWLKPEYSIK------------DAMTIEWTFRSFGF-RGSTKGGLAFWLKQGN   88 (218)
T ss_dssp             EEEEETCEEE-TTEEESCCS-TTCEEEEEESSCBCCS------------SCEEEEEEEEEESC-CSCCSCEEEEEEECSC
T ss_pred             cEECCCEEEE-CCEEEECCC-CCCeeEEEeCCccccc------------ccceEEEEEEEeCC-CCCCCCcEEEEEEcCC
Confidence            8999999997 899999998 4678999999999885            25999999999865 3567999999998754


Q ss_pred             CCC-CCCCCcccccccCCCCCCCCCcEEEEEeeecCCCCCCCCCCCCeeEEecCCccc-ccccccccccCCCccc--cc-
Q 035655          122 SFP-GGKAEHYLGILNSTNDHKPSNHLFAIEFDTVNGYNETSDSQGNHVGINVNSMKS-IKLEPAAYYENGTKED--FT-  196 (670)
Q Consensus       122 ~~~-~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~~Dp~~~Hvgidvns~~s-~~~~~~~~~~~~~~~~--~~-  196 (670)
                      ... .+..+|..+.++.          +||||||+.| .      .+||.+.+|.=.. ....+     ......  .. 
T Consensus        89 ~~~~~~~~~G~~~~f~G----------laV~fDt~~n-~------~~~i~~~~ndGs~~~~~~~-----d~~~g~c~~~~  146 (218)
T d2a6va1          89 EGDSTELFGGSSKKFNG----------LMILLRLDDK-L------GESVTAYLNDGTKDLDIES-----SPYFASCLFQY  146 (218)
T ss_dssp             CCCCCTBTTTBCSSCEE----------EEEEEEEETT-T------EEEEEEEEEESSSCCCTTT-----SCCSEEEECCC
T ss_pred             cccCCCcccccCCCcce----------EEEEEECCCC-C------CCeEEEEeCCCCccccccC-----CcccceEEecc
Confidence            321 1222333343332          7999999977 1      3688877663111 00000     000111  11 


Q ss_pred             cCCCCcEEEEEEecCccc-EEEEEEeecCCcccccccCCCCCCccc-ccccCCcccccccceeeEeecCCceeeeEEEec
Q 035655          197 LESGDPVQAWIDYDGVNR-LVNVTICPMNKKNKLSFHFGKPSQPLL-SLPLDLSPAFQETMYVGFSASTGRKVSSHFILG  274 (670)
Q Consensus       197 l~~g~~~~a~I~Yd~~~~-~l~v~~~~~~~~~~~~~~~~~p~~~~l-s~~~dl~~~l~~~~~vGFsastg~~~~~h~i~s  274 (670)
                      ..++...+++|.|+..+. .+.|.+.  +.             ..+ ...|+|  ..++.+|+||||+||...+.|+|++
T Consensus       147 ~~~~~~~~~~i~Y~~~~~~~l~v~id--~~-------------~c~~t~~i~l--p~~~~~yfG~SA~Tg~~~d~~dIls  209 (218)
T d2a6va1         147 QDSMVPSTLRLTYNPLDNHLLKLQMD--NR-------------VCFQTRKVKF--MGSSPFRIGTSAINDASKESFEILK  209 (218)
T ss_dssp             SSCSSCEEEEEEEEGGGTSEEEEEET--TE-------------EEEEESCCCG--GGTSCBEEEEEEECCTTCCEEEEEE
T ss_pred             cCCCCcEEEEEEEECcccceEEEEeC--Cc-------------EEEEECCeec--CCCCcEEEEEEECCCCCcCcEEEEE
Confidence            345788999999987664 4677653  11             111 222333  3457799999999999999999999


Q ss_pred             ccccc
Q 035655          275 WSFSM  279 (670)
Q Consensus       275 W~fs~  279 (670)
                      |++..
T Consensus       210 ~~~~~  214 (218)
T d2a6va1         210 MKLYD  214 (218)
T ss_dssp             EEEES
T ss_pred             EEEEe
Confidence            99865

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.75  E-value=3.3e-05  Score=75.20  Aligned_cols=102  Identities=15%  Similarity=0.088  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHhccc-cCceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhcccc--
Q 035655          388 REFAAEIESLGRLR-HKHLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHEE--  464 (670)
Q Consensus       388 ~~f~~Ei~~L~~l~-H~nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~--  464 (670)
                      ..+.+|...+..|. +--+.+++.++..++..++|||++++.++.+.....       ....+++.++++.++.||+.  
T Consensus        54 ~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~-------~~~~~~~~~l~~~l~~lH~~~~  126 (263)
T d1j7la_          54 YDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE-------QSPEKIIELYAECIRLFHSIDI  126 (263)
T ss_dssp             TCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTC-------SCHHHHHHHHHHHHHHHHTSCC
T ss_pred             hhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccccccc-------ccHHHHHHHHHHHHHHHhccCc
Confidence            35678998888774 333567788888888899999999998876544211       11223344444445545421  


Q ss_pred             ------------------------------------------------------ccceEEecccCCCcEEecCCCcEEEE
Q 035655          465 ------------------------------------------------------WEQVVIHRDVKSGNVLIDADMNARLG  490 (670)
Q Consensus       465 ------------------------------------------------------~~~~ivHrDIkp~NILld~~~~~kL~  490 (670)
                                                                            ....++|+|+.|.|||+++++.+-|.
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lI  206 (263)
T d1j7la_         127 SDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFI  206 (263)
T ss_dssp             TTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEEC
T ss_pred             cccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEe
Confidence                                                                  02358999999999999987667799


Q ss_pred             eecCce
Q 035655          491 DFGLAR  496 (670)
Q Consensus       491 DFGla~  496 (670)
                      ||+.+.
T Consensus       207 Dwe~a~  212 (263)
T d1j7la_         207 DLGRSG  212 (263)
T ss_dssp             CCTTCE
T ss_pred             echhcc
Confidence            999875

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.08  E-value=0.00047  Score=66.26  Aligned_cols=101  Identities=18%  Similarity=0.147  Sum_probs=67.0

Q ss_pred             hHHHHHHHHHHHhccccC--ceeeeeeeeeccCeeEEEEeccCCCCchhhcccCCccccCHHHHHHHHHHHHHHhhhccc
Q 035655          386 RMREFAAEIESLGRLRHK--HLVNLQGWCKRKRDLLLVYDYIPNGSLDSLLFDNENFVLSWEQRFNIIKGIAAGLLYLHE  463 (670)
Q Consensus       386 ~~~~f~~Ei~~L~~l~H~--nIv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~  463 (670)
                      ....+..|+..++.|...  .+.+++.++.+.+..++|||++++.++.+...       ..   ...+.++++.|+-||+
T Consensus        47 ~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~~~~-------~~---~~~~~~l~~~la~LH~  116 (255)
T d1nd4a_          47 ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHL-------AP---AEKVSIMADAMRRLHT  116 (255)
T ss_dssp             TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTTSCC-------CH---HHHHHHHHHHHHHHTT
T ss_pred             CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccccccc-------cH---HHHHHHHHHHHHHHcc
Confidence            445678899988887543  35677888888888999999999877654210       00   0111222222222221


Q ss_pred             -------------------------------------------------------cccceEEecccCCCcEEecCCCcEE
Q 035655          464 -------------------------------------------------------EWEQVVIHRDVKSGNVLIDADMNAR  488 (670)
Q Consensus       464 -------------------------------------------------------~~~~~ivHrDIkp~NILld~~~~~k  488 (670)
                                                                             .....++|+|+.|.|||++++..+-
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~  196 (255)
T d1nd4a_         117 LDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSG  196 (255)
T ss_dssp             SCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEE
T ss_pred             CChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEE
Confidence                                                                   1124589999999999999877778


Q ss_pred             EEeecCce
Q 035655          489 LGDFGLAR  496 (670)
Q Consensus       489 L~DFGla~  496 (670)
                      |+||+.+.
T Consensus       197 iID~~~~~  204 (255)
T d1nd4a_         197 FIDCGRLG  204 (255)
T ss_dssp             ECCCTTCE
T ss_pred             EEEchhcc
Confidence            99999775

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.86  E-value=0.0099  Score=60.96  Aligned_cols=30  Identities=20%  Similarity=0.408  Sum_probs=26.1

Q ss_pred             ceEEecccCCCcEEecCCCcEEEEeecCcee
Q 035655          467 QVVIHRDVKSGNVLIDADMNARLGDFGLARL  497 (670)
Q Consensus       467 ~~ivHrDIkp~NILld~~~~~kL~DFGla~~  497 (670)
                      ..++|+|+++.|||++++ .++|.||..+..
T Consensus       223 ~~LiHGDl~~gNIlv~~~-~~~vID~E~a~~  252 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  252 (392)
T ss_dssp             CEEECSCCCGGGEEECSS-CEEECCCTTCEE
T ss_pred             cceeccCCcCCceeEcCC-ceEEechhhccc
Confidence            479999999999999876 489999988864

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.65  E-value=0.029  Score=57.21  Aligned_cols=40  Identities=28%  Similarity=0.353  Sum_probs=28.3

Q ss_pred             HHHHHHHHHHhccccCce-eeeeeeeeccCeeEEEEeccCCCCch
Q 035655          388 REFAAEIESLGRLRHKHL-VNLQGWCKRKRDLLLVYDYIPNGSLD  431 (670)
Q Consensus       388 ~~f~~Ei~~L~~l~H~nI-v~l~g~~~~~~~~~lV~E~~~~gsL~  431 (670)
                      ....+|..+++.+.-.++ .+++++|.+    .+|+||+++..|.
T Consensus        89 idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi~g~~l~  129 (395)
T d1nw1a_          89 SHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRPLS  129 (395)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEECC
T ss_pred             hHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEeccccCC
Confidence            345689999998864455 467777753    5899999876554

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.91  E-value=0.25  Score=47.95  Aligned_cols=32  Identities=34%  Similarity=0.288  Sum_probs=28.5

Q ss_pred             ccceEEecccCCCcEEecCCCcEEEEeecCce
Q 035655          465 WEQVVIHRDVKSGNVLIDADMNARLGDFGLAR  496 (670)
Q Consensus       465 ~~~~ivHrDIkp~NILld~~~~~kL~DFGla~  496 (670)
                      ...++||+|+.+.||+++.+...-|.||+.+.
T Consensus       181 L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         181 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccccCCcchhhhhcccccceeEecccccc
Confidence            35789999999999999988777899999875