BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035659
(655 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 629 bits (1621), Expect = e-179, Method: Compositional matrix adjust.
Identities = 305/615 (49%), Positives = 432/615 (70%), Gaps = 16/615 (2%)
Query: 44 LIKQCKNIKQL---KQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQ 100
LIK + L + +H +++ + D + A+ L C + L+ A ++F I +
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIH-CYF-SCGDLDSACKVFTTIKE 194
Query: 101 PNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQA 160
++ +WN++I + P ++ +F ++ + + T V+ A A++ G+
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253
Query: 161 IHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGF 220
+ + ++ +L ++N+++ Y CG + A +F + +KD V+W +M+ G+
Sbjct: 254 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313
Query: 221 FEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNP 280
+E A E+ M +++ V A++SA E PNEAL +FHELQL KN+
Sbjct: 314 YEAAREVLNSMPQKDI----VAWNALISA------YEQNGKPNEALIVFHELQLQKNMKL 363
Query: 281 DEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVF 340
++ T VS LSACAQ+GA+++G IH+ +KK GI++N ++T++LI MY+KCG+L+K+ EVF
Sbjct: 364 NQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 423
Query: 341 HTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVD 400
++V+ RDVFVWS MI G AM+GCG EA+D+F +MQEA VKPN VTFTNV CACSH+GLVD
Sbjct: 424 NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD 483
Query: 401 EGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGA 460
E F+QME YG+VP KHY C+VD+LGR+G L++AV+FIE MPI P SVWGALLGA
Sbjct: 484 EAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
Query: 461 CKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEP 520
CKIH N+ LAE AC+ LLELEP N GA VLLSNIYAK GKW+NVSELRKHMRV+GLKKEP
Sbjct: 544 CKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEP 603
Query: 521 GCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQ 580
GCSSIE++G IH+FL+G+++HP+ +++Y KL E++ +LKS GY P S +LQ++EEE+++
Sbjct: 604 GCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMK 663
Query: 581 EQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYR 640
EQ+LNLHSE+LAI YGLIS E + IR++KNLRVCGDCH+VAKLIS+LY+REI++RDRYR
Sbjct: 664 EQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYR 723
Query: 641 FHHFRGGNCSCMDYW 655
FHHFR G CSC D+W
Sbjct: 724 FHHFRNGQCSCNDFW 738
Score = 335 bits (859), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 185/455 (40%), Positives = 279/455 (61%), Gaps = 27/455 (5%)
Query: 17 ISLPRHPN---PTTLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSA 73
+SLPRHPN P T NN H SLI++C +++QLKQ H M+RTG F DPYSA
Sbjct: 10 LSLPRHPNFSNPNQPTTNNERSRH----ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSA 65
Query: 74 SKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNS 133
SKLF AL +F+SLEYAR++FD+IP+PN + WNTLIRAY+S +P+ S FL +V S
Sbjct: 66 SKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 125
Query: 134 PYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMA 193
+PN++TFPF+IKAAA + +GQ++HGM +KS+ D+F++NSLIH Y CGDL A
Sbjct: 126 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 185
Query: 194 YCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKK 253
VF I +KDVVSWNSMI+GFVQ G +KA+EL+++ME E+VK VTMV VLSACAK
Sbjct: 186 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 245
Query: 254 RDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGI 313
R+LEFGR + S E +++ N+ ++L + G+++ ++ M++
Sbjct: 246 RNLEFGR---QVCSYIEENRVNVNLTLAN----AMLDMYTKCGSIEDAKRLFDAMEE--- 295
Query: 314 KLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSR 373
K N TT ++D Y + + A EV +++ +D+ W+ +I+ + G EAL +F
Sbjct: 296 KDNVTWTT-MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354
Query: 374 MQ-EAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRA 432
+Q + +K N +T + L AC+ G ++ GR + ++ +G+ + ++ M +
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKC 413
Query: 433 GLLDEAVEF---IEKMPIVPGASVWGALLGACKIH 464
G L+++ E +EK + VW A++G +H
Sbjct: 414 GDLEKSREVFNSVEKRDVF----VWSAMIGGLAMH 444
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/623 (43%), Positives = 403/623 (64%), Gaps = 15/623 (2%)
Query: 35 QHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSS-LEYARE 93
+H+ + S +++C ++LKQIH +ML+TGL D Y+ +K + C T S L YA+
Sbjct: 11 EHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQI 70
Query: 94 MFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNS-PYFPNEFTFPFVIKAAARL 152
+FD +P+ + WN +IR +S S EP +S +++ +++ +S P+ N +TFP ++KA + L
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH--NAYTFPSLLKACSNL 128
Query: 153 VQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMI 212
F IH + K +E+D++ NSLI+ YA+ G+ +A+ +F I + D VSWNS+I
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVI 188
Query: 213 SGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHEL 272
G+V+ G + A+ L+R+M +N + + A K EAL +FHE+
Sbjct: 189 KGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK----------EALQLFHEM 238
Query: 273 QLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGN 332
Q S +V PD + + LSACAQLGA++ G IH+ + K I+++ L LIDMY KCG
Sbjct: 239 QNS-DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 333 LDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCA 392
+++ALEVF +K + V W+ +I+G+A +G GREA+ F MQ+ +KPN +TFT VL A
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 393 CSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGAS 452
CS++GLV+EG++ F ME Y + P ++HY C+VD+LGRAGLLDEA FI++MP+ P A
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 453 VWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMR 512
+WGALL AC+IH+N+EL E L+ ++P + G V +NI+A KWD +E R+ M+
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMK 477
Query: 513 VSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQ 572
G+ K PGCS+I + G H+FLAG+ SHP ++I SK + +L+ GYVP +L
Sbjct: 478 EQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLL 537
Query: 573 LVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNRE 632
+ ++D +E ++ HSE+LAI YGLI +P IRI+KNLRVC DCH V KLISK+Y R+
Sbjct: 538 DLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRD 597
Query: 633 ILLRDRYRFHHFRGGNCSCMDYW 655
I++RDR RFHHFR G CSC DYW
Sbjct: 598 IVMRDRTRFHHFRDGKCSCGDYW 620
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/633 (40%), Positives = 402/633 (63%), Gaps = 30/633 (4%)
Query: 41 VFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTF--SSLEYAREMFDQI 98
+F I C+ I+ L QIH +++G D +A+++ CA L+YA ++F+Q+
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 99 PQPNLYTWNTLIRAYSSSAE--PIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFR 156
PQ N ++WNT+IR +S S E + + +F +++ + PN FTFP V+KA A+ + +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 157 VGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVF----------VMIGKK--- 203
G+ IHG+ +K F D F+ ++L+ Y +CG + A +F VM ++
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 204 -DVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWP 262
++V WN MI G+++ G + A L+ +M +V V+ ++S + +
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSV----VSWNTMISGYS------LNGFF 255
Query: 263 NEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTS 322
+A+ +F E++ ++ P+ T VSVL A ++LG++++G +H + GI+++ L ++
Sbjct: 256 KDAVEVFREMK-KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 323 LIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPN 382
LIDMY+KCG ++KA+ VF + +V WS MI GFA++G +A+D F +M++A V+P+
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 383 AVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFI 442
V + N+L ACSH GLV+EGR +F+QM V G+ P ++HY CMVD+LGR+GLLDEA EFI
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 443 EKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWD 502
MPI P +W ALLGAC++ NVE+ + + L+++ P + GA V LSN+YA G W
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494
Query: 503 NVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFG 562
VSE+R M+ ++K+PGCS I+++G +H+F+ + SHP KEI S L EI +L+ G
Sbjct: 495 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Query: 563 YVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVA 622
Y P + +L +EEED +E L+ HSE++A A+GLIS P +PIRIVKNLR+C DCH+
Sbjct: 555 YRPITTQVLLNLEEED-KENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613
Query: 623 KLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
KLISK+Y R+I +RDR RFHHF+ G+CSCMDYW
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 517 bits (1332), Expect = e-146, Method: Compositional matrix adjust.
Identities = 295/749 (39%), Positives = 421/749 (56%), Gaps = 103/749 (13%)
Query: 1 MTDNPPQHMETLSTPVISLPRHPNPTTLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQ 60
M P + + S P LP +P ++ N HP SL+ CK ++ L+ IH Q
Sbjct: 2 MLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRN------HPSLSLLHNCKTLQSLRIIHAQ 55
Query: 61 MLRTGLFFDPYSASKLFTPCALGT-FSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEP 119
M++ GL Y+ SKL C L F L YA +F I +PNL WNT+ R ++ S++P
Sbjct: 56 MIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDP 115
Query: 120 IQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNS 179
+ + +++ ++ + PN +TFPFV+K+ A+ F+ GQ IHG V+K + DL++ S
Sbjct: 116 VSALKLYVCMI-SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 174
Query: 180 LIHFYAICGDLAMAYCVFVM-------------------------------IGKKDVVSW 208
LI Y G L A+ VF I KDVVSW
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 234
Query: 209 NSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMV------------------------ 244
N+MISG+ + G +++A+EL+++M NV+PDE TMV
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 245 -----------AVLSACAKKRDLE-----FGRWP--------------------NEALSI 268
A++ +K +LE F R P EAL +
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 269 FHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKK--QGIKLNCYLTTSLIDM 326
F E+ L P++ T +S+L ACA LGA+DIG IH + K +G+ L TSLIDM
Sbjct: 355 FQEM-LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 327 YTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTF 386
Y KCG+++ A +VF+++ + + W+ MI GFAM+G + DLFSRM++ ++P+ +TF
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 387 TNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMP 446
+L ACSHSG++D GR F M Y + P ++HY CM+D+LG +GL EA E I M
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 533
Query: 447 IVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSE 506
+ P +W +LL ACK+H NVEL E +L+++EPEN G+ VLLSNIYA G+W+ V++
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 593
Query: 507 LRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPN 566
R + G+KK PGCSSIE++ +H+F+ G+ HP +EIY L+E+ L+ G+VP+
Sbjct: 594 TRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPD 653
Query: 567 RSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLIS 626
S +LQ +EEE +E AL HSE+LAIA+GLIS +P + IVKNLRVC +CH KLIS
Sbjct: 654 TSEVLQEMEEE-WKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLIS 712
Query: 627 KLYNREILLRDRYRFHHFRGGNCSCMDYW 655
K+Y REI+ RDR RFHHFR G CSC DYW
Sbjct: 713 KIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/623 (42%), Positives = 393/623 (63%), Gaps = 19/623 (3%)
Query: 39 HPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCAL-GTFSS----LEYARE 93
HP +L++ C + LK IH +LRT L D + AS+L C TF+ L YA
Sbjct: 13 HPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 94 MFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLV 153
+F QI PNL+ +N LIR +S+ AEP ++F + Q++ S +P+ TFPF+IKA++ +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIKASSEME 131
Query: 154 QFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMIS 213
VG+ H +++ F++D+++ NSL+H YA CG +A A +F +G +DVVSW SM++
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 214 GFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQ 273
G+ + G E A E++ EM N+ T +++ AK E +A+ +F E
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNL----FTWSIMINGYAKNNCFE------KAIDLF-EFM 240
Query: 274 LSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNL 333
+ V +E VSV+S+CA LGA++ G + + + K + +N L T+L+DM+ +CG++
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 334 DKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCAC 393
+KA+ VF + D WS++I G A++G +A+ FS+M P VTFT VL AC
Sbjct: 301 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSAC 360
Query: 394 SHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASV 453
SH GLV++G + M+ +G+ P ++HY C+VDMLGRAG L EA FI KM + P A +
Sbjct: 361 SHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPI 420
Query: 454 WGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRV 513
GALLGACKI++N E+AE + L++++PE+ G VLLSNIYA G+WD + LR M+
Sbjct: 421 LGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
Query: 514 SGLKKEPGCSSIEVNGEIHKFLAGES-SHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQ 572
+KK PG S IE++G+I+KF G+ HP +I K +EI+ +++ GY N
Sbjct: 481 KLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFF 540
Query: 573 LVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNRE 632
V+EE+ +E ++++HSE+LAIAYG++ +P IRIVKNLRVC DCHTV KLIS++Y RE
Sbjct: 541 DVDEEE-KESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRE 599
Query: 633 ILLRDRYRFHHFRGGNCSCMDYW 655
+++RDR RFHHFR G CSC DYW
Sbjct: 600 LIVRDRNRFHHFRNGVCSCRDYW 622
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 496 bits (1277), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/610 (40%), Positives = 374/610 (61%), Gaps = 47/610 (7%)
Query: 50 NIKQLKQIHTQMLRTGLFFDPYSASK--LFTPCALGTFSSLEYAREMFDQIPQP-NLYTW 106
+I +L+QIH +R G+ K +F +L + + YA ++F +I +P N++ W
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 107 NTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVI 166
NTLIR Y+ I +F ++ ++ + P+ T+PF+IKA + R+G+ IH +VI
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 167 KSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIE 226
+S F +++ NSL+H YA CGD+A AY VF + +KD+V+WNS+I+GF + G
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG------- 201
Query: 227 LYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFV 286
P EAL+++ E+ SK + PD FT V
Sbjct: 202 ----------------------------------KPEEALALYTEMN-SKGIKPDGFTIV 226
Query: 287 SVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSR 346
S+LSACA++GA+ +G ++H M K G+ N + + L+D+Y +CG +++A +F + +
Sbjct: 227 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Query: 347 DVFVWSTMIAGFAMYGCGREALDLFSRMQEAK-VKPNAVTFTNVLCACSHSGLVDEGRMF 405
+ W+++I G A+ G G+EA++LF M+ + + P +TF +L ACSH G+V EG +
Sbjct: 287 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEY 346
Query: 406 FNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIHE 465
F +M Y + P ++H+ CMVD+L RAG + +A E+I+ MP+ P +W LLGAC +H
Sbjct: 347 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Query: 466 NVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSI 525
+ +LAE+A +L+LEP + G VLLSN+YA +W +V ++RK M G+KK PG S +
Sbjct: 407 DSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 466
Query: 526 EVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQEQALN 585
EV +H+FL G+ SHP IY+KL E+ RL+S GYVP S++ VEEE+ +E A+
Sbjct: 467 EVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE-KENAVV 525
Query: 586 LHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRFHHFR 645
HSE++AIA+ LIS PI +VKNLRVC DCH KL+SK+YNREI++RDR RFHHF+
Sbjct: 526 YHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFK 585
Query: 646 GGNCSCMDYW 655
G+CSC DYW
Sbjct: 586 NGSCSCQDYW 595
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/656 (39%), Positives = 388/656 (59%), Gaps = 69/656 (10%)
Query: 19 LPRHPNPTTLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFT 78
+P +P+ T N HQ +FSL + C ++ QLKQ+H LRT P + LF
Sbjct: 33 IPPASSPSASTAGNHHQR----IFSLAETCSDMSQLKQLHAFTLRTTY---PEEPATLFL 85
Query: 79 PCAL----GTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSS-AEPIQSFMIFLQLVYNS 133
+ +FS + YA +FD I + + WNTLIRA + + ++FM++ +++
Sbjct: 86 YGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERG 145
Query: 134 PYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMA 193
P++ TFPFV+KA A + F G+ +H ++K F D++++N LIH Y CG L +A
Sbjct: 146 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA 205
Query: 194 YCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKK 253
VF + ++ +VSWNSMI V+
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVR------------------------------------ 229
Query: 254 RDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQ-- 311
FG + + AL +F E+Q ++ PD +T SVLSACA LG++ +G HA + ++
Sbjct: 230 ----FGEY-DSALQLFREMQ--RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCD 282
Query: 312 -GIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDL 370
+ ++ + SLI+MY KCG+L A +VF ++ RD+ W+ MI GFA +G EA++
Sbjct: 283 VDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNF 342
Query: 371 FSRMQEAK--VKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDM 428
F RM + + V+PN+VTF +L AC+H G V++GR +F+ M Y + P ++HY C+VD+
Sbjct: 343 FDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDL 402
Query: 429 LGRAGLLDEAVEFIEKMPIVPGASVWGALLGAC-KIHENVELAEYACSHLLELEPENH-- 485
+ RAG + EA++ + MP+ P A +W +LL AC K +VEL+E +++ + +N
Sbjct: 403 IARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESS 462
Query: 486 -----GALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESS 540
GA VLLS +YA +W++V +RK M G++KEPGCSSIE+NG H+F AG++S
Sbjct: 463 NGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTS 522
Query: 541 HPLCKEIYSKLDEIVARLKSFGYVPNRSHL-LQLVEEEDVQEQALNLHSERLAIAYGLIS 599
HP K+IY +L I RL+S GY+P+RS L + +E +L LHSERLAIA+GLI+
Sbjct: 523 HPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLIN 582
Query: 600 VEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
+ P PIRI KNLRVC DCH V KLISK++N EI++RDR RFHHF+ G+CSC+DYW
Sbjct: 583 LPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/618 (39%), Positives = 383/618 (61%), Gaps = 13/618 (2%)
Query: 39 HPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQI 98
HP +L+ K+++QIH ++ G D + AL L+YA ++ D+
Sbjct: 7 HPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRS 66
Query: 99 PQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYF-PNEFTFPFVIKAAARLVQFRV 157
+P L+ N++IRA+ S P +SF + +++ + P+ +T F+++A L
Sbjct: 67 EKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 158 GQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQ 217
G +HGM I+ F++D + LI YA G L + VF I D V +M++ +
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 218 GGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKN 277
G A +L+ M + D + A++S A+ + EAL++FH +QL +
Sbjct: 187 CGDVVFARKLFEGMP----ERDPIAWNAMISGYAQVGE------SREALNVFHLMQL-EG 235
Query: 278 VNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKAL 337
V + +SVLSAC QLGA+D G H+ +++ IK+ L T+L+D+Y KCG+++KA+
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 338 EVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSG 397
EVF ++ ++V+ WS+ + G AM G G + L+LFS M++ V PNAVTF +VL CS G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 398 LVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGAL 457
VDEG+ F+ M +G+ P ++HY C+VD+ RAG L++AV I++MP+ P A+VW +L
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Query: 458 LGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLK 517
L A ++++N+EL A +LELE NHGA VLLSNIYA + WDNVS +R+ M+ G++
Sbjct: 416 LHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVR 475
Query: 518 KEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEE 577
K+PGCS +EVNGE+H+F G+ SHP +I + +I RL+ GY + + ++ ++EE
Sbjct: 476 KQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEE 535
Query: 578 DVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRD 637
+ +E AL LHSE+ AIA+G++S++ PIRIVKNLRVCGDCH V+ +ISK++NREI++RD
Sbjct: 536 E-KEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRD 594
Query: 638 RYRFHHFRGGNCSCMDYW 655
R RFHHF+ G+CSC +W
Sbjct: 595 RNRFHHFKDGHCSCNGFW 612
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/657 (38%), Positives = 378/657 (57%), Gaps = 41/657 (6%)
Query: 35 QHHPHPVFSLIKQC----KNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEY 90
Q P L+ Q +I+ L+ +H++++ L + KL A + +
Sbjct: 35 QKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMR--AYASLKDVAS 92
Query: 91 AREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAA 150
AR++FD+IP+ N+ N +IR+Y ++ + +F + P+ +TFP V+KA +
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVLKACS 151
Query: 151 RLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNS 210
+G+ IHG K LF+ N L+ Y CG L+ A V + ++DVVSWNS
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNS 211
Query: 211 MISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKK--------RDLEF--GR 260
++ G+ Q F+ A+E+ REME + D TM ++L A + +D+ F G+
Sbjct: 212 LVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGK 271
Query: 261 -----W------------PNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQ 303
W P EA+ ++ ++ + PD + SVL AC A+ +G +
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 304 IHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGC 363
IH ++++ + N L +LIDMY KCG L+KA +VF +KSRDV W+ MI+ + G
Sbjct: 331 IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGR 390
Query: 364 GREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYT 423
G +A+ LFS++Q++ + P+++ F L ACSH+GL++EGR F M Y + P ++H
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA 450
Query: 424 CMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPE 483
CMVD+LGRAG + EA FI+ M + P VWGALLGAC++H + ++ A L +L PE
Sbjct: 451 CMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPE 510
Query: 484 NHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPL 543
G VLLSNIYAK G+W+ V+ +R M+ GLKK PG S++EVN IH FL G+ SHP
Sbjct: 511 QSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQ 570
Query: 544 CKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISV--- 600
EIY +LD +V ++K GYVP+ L VEEED +E L +HSE+LAI + L++
Sbjct: 571 SDEIYRELDVLVKKMKELGYVPDSESALHDVEEED-KETHLAVHSEKLAIVFALMNTKEE 629
Query: 601 --EPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
+ + IRI KNLR+CGDCH AKLIS++ +REI++RD RFH FR G CSC DYW
Sbjct: 630 EEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/647 (39%), Positives = 391/647 (60%), Gaps = 21/647 (3%)
Query: 13 STPVI--SLPRHPNPTTLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDP 70
S+P++ SLP++ TT T P + LI + +++ ++ QIH +LR L P
Sbjct: 3 SSPLLATSLPQNQLSTTATARF-RLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHP 61
Query: 71 -YSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQL 129
Y L A + + ++ +F Q P+L+ + I S + Q+F++++QL
Sbjct: 62 RYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL 121
Query: 130 VYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGD 189
+ +S PNEFTF ++K+ + + G+ IH V+K D +++ L+ YA GD
Sbjct: 122 L-SSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGD 176
Query: 190 LAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSA 249
+ A VF + ++ +VS +MI+ + + G E A L+ M + D V+ ++
Sbjct: 177 VVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSM----CERDIVSWNVMIDG 232
Query: 250 CAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMK 309
A+ +PN+AL +F +L PDE T V+ LSAC+Q+GA++ G IH +K
Sbjct: 233 YAQHG------FPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVK 286
Query: 310 KQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALD 369
I+LN + T LIDMY+KCG+L++A+ VF+ +D+ W+ MIAG+AM+G ++AL
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 370 LFSRMQE-AKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDM 428
LF+ MQ ++P +TF L AC+H+GLV+EG F M YG+ P ++HY C+V +
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 429 LGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGAL 488
LGRAG L A E I+ M + + +W ++LG+CK+H + L + +L+ L +N G
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIY 466
Query: 489 VLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIY 548
VLLSNIYA G ++ V+++R M+ G+ KEPG S+IE+ ++H+F AG+ H KEIY
Sbjct: 467 VLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIY 526
Query: 549 SKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRI 608
+ L +I R+KS GYVPN + +LQ +EE + +EQ+L +HSERLAIAYGLIS +P P++I
Sbjct: 527 TMLRKISERIKSHGYVPNTNTVLQDLEETE-KEQSLQVHSERLAIAYGLISTKPGSPLKI 585
Query: 609 VKNLRVCGDCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
KNLRVC DCHTV KLISK+ R+I++RDR RFHHF G+CSC D+W
Sbjct: 586 FKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/606 (40%), Positives = 358/606 (59%), Gaps = 48/606 (7%)
Query: 52 KQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIR 111
KQLK+IH +LRTG ++L L + YAR++FD++ +P ++ WNTL +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLEN--LVVIGDMCYARQVFDEMHKPRIFLWNTLFK 82
Query: 112 AYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFE 171
Y + P +S +++ ++ + P+EFT+PFV+KA ++L F G A+H V+K F
Sbjct: 83 GYVRNQLPFESLLLYKKM-RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG 141
Query: 172 DDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREM 231
++ L+ Y G+L+ A +F + KD+V+WN+ ++ VQ G A+E + +M
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 232 EMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSA 291
CA V D FT VS+LSA
Sbjct: 202 ------------------CADA------------------------VQFDSFTVVSMLSA 219
Query: 292 CAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVW 351
C QLG+++IG +I+ + +K+ I N + + +DM+ KCGN + A +F +K R+V W
Sbjct: 220 CGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSW 279
Query: 352 STMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQM-- 409
STMI G+AM G REAL LF+ MQ ++PN VTF VL ACSH+GLV+EG+ +F+ M
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
Query: 410 EPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIHENVEL 469
+ P +HY CMVD+LGR+GLL+EA EFI+KMP+ P +WGALLGAC +H ++ L
Sbjct: 340 SNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMIL 399
Query: 470 AEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNG 529
+ L+E P+ VLLSNIYA GKWD V ++R MR G KK SS+E G
Sbjct: 400 GQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEG 459
Query: 530 EIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSE 589
+IH F G+ SHP K IY KLDEI+ +++ GYVP+ + VE E+ +E +L+ HSE
Sbjct: 460 KIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEE-KECSLSHHSE 518
Query: 590 RLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRFHHFRGGNC 649
+LAIA+GLI P PIR++KNLR C DCH +K +S L + EI++RD+ RFHHFR G C
Sbjct: 519 KLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVC 578
Query: 650 SCMDYW 655
SC ++W
Sbjct: 579 SCKEFW 584
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/634 (39%), Positives = 371/634 (58%), Gaps = 50/634 (7%)
Query: 27 TLTVNNGHQHHPH-PVFSLIKQCKNIKQLKQ---IHTQMLRTGLFFDPYSASKLFTPCAL 82
LT++NG + V SL+ C + IH+ ++ GL + + ++KL A
Sbjct: 235 ALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA- 293
Query: 83 GTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTF 142
F L +++FD++ +L +WN++I+AY + +P+++ +F ++ S P+ T
Sbjct: 294 -EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL-SRIQPDCLTL 351
Query: 143 PFVIKAAARLVQFRVGQAIHGMVI-KSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIG 201
+ ++L R +++ G + K F +D+ I N+++ YA G + A VF +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 202 KKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRW 261
DV+SWN++ISG+ Q GF +AIE+Y ME E
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG-------------------------- 445
Query: 262 PNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTT 321
+ ++ T+VSVL AC+Q GA+ G+++H ++ K G+ L+ ++ T
Sbjct: 446 ---------------EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490
Query: 322 SLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKP 381
SL DMY KCG L+ AL +F+ + + W+T+IA +G G +A+ LF M + VKP
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550
Query: 382 NAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEF 441
+ +TF +L ACSHSGLVDEG+ F M+ YG+ P +KHY CMVDM GRAG L+ A++F
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610
Query: 442 IEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKW 501
I+ M + P AS+WGALL AC++H NV+L + A HL E+EPE+ G VLLSN+YA GKW
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670
Query: 502 DNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSF 561
+ V E+R GL+K PG SS+EV+ ++ F G +HP+ +E+Y +L + A+LK
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
Query: 562 GYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTV 621
GYVP+ +LQ V E+D +E L HSERLAIA+ LI+ IRI KNLRVCGDCH+V
Sbjct: 731 GYVPDHRFVLQDV-EDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSV 789
Query: 622 AKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
K ISK+ REI++RD RFHHF+ G CSC DYW
Sbjct: 790 TKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 248/530 (46%), Gaps = 84/530 (15%)
Query: 31 NNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTP-CALGTFSSLE 89
N V +L + C N++ K +H +++ + + ++KL C LG ++
Sbjct: 47 NGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLG---NVA 103
Query: 90 YAREMFDQIPQPNLYTWNTLIRAYS---SSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVI 146
AR FD I ++Y WN +I Y +S+E I+ F +F+ +S P+ TFP V+
Sbjct: 104 LARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM---LSSGLTPDYRTFPSVL 160
Query: 147 KAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVV 206
KA ++ G IH + +K F D++++ SLIH Y+ + A +F + +D+
Sbjct: 161 KACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 217
Query: 207 SWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDL---------- 256
SWN+MISG+ Q G ++A+ L + D VT+V++LSAC + D
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 257 --------------------EFGR------------------W------------PNEAL 266
EFGR W P A+
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 267 SIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKL-NCYLTTSLID 325
S+F E++LS+ + PD T +S+ S +QLG + + ++G L + + +++
Sbjct: 334 SLFQEMRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 326 MYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRM-QEAKVKPNAV 384
MY K G +D A VF+ + + DV W+T+I+G+A G EA+++++ M +E ++ N
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 385 TFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEK 444
T+ +VL ACS +G + +G ++ G+ V T + DM G+ G L++A+ +
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ 511
Query: 445 MPIVPGASVWGALLGACKIHENVELAEYACSHLLE--LEPENHGALVLLS 492
+P V W L+ H + E A +L+ ++P++ + LLS
Sbjct: 512 IPRVNSVP-WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/644 (39%), Positives = 372/644 (57%), Gaps = 33/644 (5%)
Query: 39 HPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQI 98
H SL+ CKN++ L QIH ++ G+ D Y KL CA+ +L YAR +
Sbjct: 6 HHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65
Query: 99 PQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVG 158
P+P+ + +NTL+R YS S EP S +F++++ FP+ F+F FVIKA R G
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 159 QAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQG 218
+H +K E LF+ +LI Y CG + A VF + + ++V+WN++I+ +G
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 219 GFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLE-----FGRWP----------- 262
A E++ +M + N + +L+ K +LE F P
Sbjct: 186 NDVAGAREIFDKMLVRN----HTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMI 241
Query: 263 ---------NEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGI 313
NE+ F ELQ + ++P+E + VLSAC+Q G+ + G +H ++K G
Sbjct: 242 VGIAHNGSFNESFLYFRELQRA-GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY 300
Query: 314 KLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFV-WSTMIAGFAMYGCGREALDLFS 372
+ +LIDMY++CGN+ A VF ++ + V W++MIAG AM+G G EA+ LF+
Sbjct: 301 SWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFN 360
Query: 373 RMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRA 432
M V P+ ++F ++L ACSH+GL++EG +F++M+ VY + P ++HY CMVD+ GR+
Sbjct: 361 EMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRS 420
Query: 433 GLLDEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLS 492
G L +A +FI +MPI P A VW LLGAC H N+ELAE L EL+P N G LVLLS
Sbjct: 421 GKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLS 480
Query: 493 NIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLD 552
N YA GKW +V+ +RK M V +KK S +EV ++KF AGE + E + KL
Sbjct: 481 NAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLK 540
Query: 553 EIVARLKS-FGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKN 611
EI+ RLK GY P + L VEEE+ ++Q ++ HSE+LA+A+ L + IRIVKN
Sbjct: 541 EIILRLKDEAGYTPEVASALYDVEEEEKEDQ-VSKHSEKLALAFALARLSKGANIRIVKN 599
Query: 612 LRVCGDCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
LR+C DCH V KL SK+Y EIL+RDR RFH F+ G+CSC DYW
Sbjct: 600 LRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 259/693 (37%), Positives = 384/693 (55%), Gaps = 70/693 (10%)
Query: 26 TTLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTF 85
+ L N H SLI + QLKQIH ++L GL F + +KL A +F
Sbjct: 9 SPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSF 66
Query: 86 SSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIF--LQLVYNSPYFPNEFTFP 143
+ +AR++FD +P+P ++ WN +IR YS + + +++ +QL S P+ FTFP
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS---PDSFTFP 123
Query: 144 FVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVF--VMIG 201
++KA + L ++G+ +H V + F+ D+F+ N LI YA C L A VF + +
Sbjct: 124 HLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183
Query: 202 KKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRW 261
++ +VSW +++S + Q G +A+E++ +M +VKPD V +V+VL+A +DL+ GR
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 262 PNEA-----LSIFHELQLSKNV-------------------NPDEFTFVSVLSACAQLGA 297
+ + L I +L +S N +P+ + +++S A+ G
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 298 MDIGVQIHAKMKKQGIKLNCYLTTSLI--------------------------------- 324
+ + +M + ++ + TS I
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 325 --DMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPN 382
DM+ KCG+++ A VF RDV VWS MI G+ ++G REA+ L+ M+ V PN
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 383 AVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFI 442
VTF +L AC+HSG+V EG FFN+M + + P +HY C++D+LGRAG LD+A E I
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 443 EKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWD 502
+ MP+ PG +VWGALL ACK H +VEL EYA L ++P N G V LSN+YA WD
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542
Query: 503 NVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFG 562
V+E+R M+ GL K+ GCS +EV G + F G+ SHP +EI +++ I +RLK G
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Query: 563 YVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVA 622
+V N+ L + +E+ E+ L HSER+AIAYGLIS P+RI KNLR C +CH
Sbjct: 603 FVANKDASLHDLNDEEA-EETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAAT 661
Query: 623 KLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
KLISKL +REI++RD RFHHF+ G CSC DYW
Sbjct: 662 KLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/616 (38%), Positives = 359/616 (58%), Gaps = 50/616 (8%)
Query: 43 SLIKQCKNIKQLKQ---IHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIP 99
+L+K+C K L Q +H +L++ D + L A SLE AR++F+++P
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYA--KCGSLEEARKVFEKMP 122
Query: 100 QPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQ 159
Q + TW TLI YS P + + F Q++ Y PNEFT VIKAAA + G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQML-RFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 160 AIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGG 219
+HG +K F+ ++ + ++L+ Y G + A VF + ++ VSWN++I+G +
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 220 FFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVN 279
EKA+EL++ M L
Sbjct: 242 GTEKALELFQGM------------------------------------------LRDGFR 259
Query: 280 PDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEV 339
P F++ S+ AC+ G ++ G +HA M K G KL + +L+DMY K G++ A ++
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 340 FHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLV 399
F + RDV W++++ +A +G G+EA+ F M+ ++PN ++F +VL ACSHSGL+
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379
Query: 400 DEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLG 459
DEG ++ M+ G+VP HY +VD+LGRAG L+ A+ FIE+MPI P A++W ALL
Sbjct: 380 DEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 460 ACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKE 519
AC++H+N EL YA H+ EL+P++ G V+L NIYA G+W++ + +RK M+ SG+KKE
Sbjct: 439 ACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKE 498
Query: 520 PGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDV 579
P CS +E+ IH F+A + HP +EI K +E++A++K GYVP+ SH++ V++++
Sbjct: 499 PACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE- 557
Query: 580 QEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRY 639
+E L HSE++A+A+ L++ P I I KN+RVCGDCHT KL SK+ REI++RD
Sbjct: 558 REVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTN 617
Query: 640 RFHHFRGGNCSCMDYW 655
RFHHF+ GNCSC DYW
Sbjct: 618 RFHHFKDGNCSCKDYW 633
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 44/258 (17%)
Query: 281 DEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVF 340
D + ++L C + G +HA + + + + + +L++MY KCG+L++A +VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 341 HTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCA-------- 392
+ RD W+T+I+G++ + +AL F++M PN T ++V+ A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 393 CSHS---------------------------GLVDEGRMFFNQMEPVYGVVPGVKHYTCM 425
C H GL+D+ ++ F+ +E V + +
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV-----SWNAL 233
Query: 426 VDMLGRAGLLDEAVEFIEKM---PIVPGASVWGALLGACKIHENVELAEYACSHLLEL-E 481
+ R ++A+E + M P + +L GAC +E ++ +++++ E
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 482 PENHGALVLLSNIYAKTG 499
A L ++YAK+G
Sbjct: 294 KLVAFAGNTLLDMYAKSG 311
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/677 (36%), Positives = 381/677 (56%), Gaps = 73/677 (10%)
Query: 44 LIKQCKNIKQL---KQIHTQMLRTGLFFDPYSASKL---FTPCALGTFSSLEYAREMFDQ 97
L+K C + +L K+IH ++++G D ++ + L + C + AR++FD+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKC-----RQVNEARKVFDR 195
Query: 98 IPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRV 157
+P+ +L +WNT++ YS + + + + + P+ T V+ A + L V
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK-PSFITIVSVLPAVSALRLISV 254
Query: 158 GQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQ 217
G+ IHG ++S F+ + IS +L+ YA CG L A +F + +++VVSWNSMI +VQ
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 218 GGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRW---------------- 261
++A+ ++++M E VKP +V+++ L ACA DLE GR+
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 262 -------------PNEALSIFHELQ------------------------------LSKNV 278
+ A S+F +LQ S+ V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 279 NPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALE 338
PD FT+VSV++A A+L IH + + + N ++TT+L+DMY KCG + A
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 339 VFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGL 398
+F + R V W+ MI G+ +G G+ AL+LF MQ+ +KPN VTF +V+ ACSHSGL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 399 VDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALL 458
V+ G F M+ Y + + HY MVD+LGRAG L+EA +FI +MP+ P +V+GA+L
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML 614
Query: 459 GACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKK 518
GAC+IH+NV AE A L EL P++ G VLL+NIY W+ V ++R M GL+K
Sbjct: 615 GACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRK 674
Query: 519 EPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEED 578
PGCS +E+ E+H F +G ++HP K+IY+ L++++ +K GYVP+ + +L + E D
Sbjct: 675 TPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGV--END 732
Query: 579 VQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDR 638
V+EQ L+ HSE+LAI++GL++ I + KNLRVC DCH K IS + REI++RD
Sbjct: 733 VKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDM 792
Query: 639 YRFHHFRGGNCSCMDYW 655
RFHHF+ G CSC DYW
Sbjct: 793 QRFHHFKNGACSCGDYW 809
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/609 (24%), Positives = 271/609 (44%), Gaps = 136/609 (22%)
Query: 18 SLPRHPNPTTLTVNNGHQH------------HPHPVFSLIKQCKNIKQLKQIHTQMLRTG 65
++P+ PNP + H+H + HP L+++C ++K+L+QI + + G
Sbjct: 10 TVPQIPNPPSR-----HRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNG 64
Query: 66 LFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMI 125
L+ + + +KL + + S++ A +F+ I ++T+++ ++ ++ ++
Sbjct: 65 LYQEHFFQTKLVS--LFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQF 122
Query: 126 FLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYA 185
F+++ Y+ P + F +++K + RVG+ IHG+++KS F DLF L + YA
Sbjct: 123 FVRMRYDDVE-PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181
Query: 186 ICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVA 245
C + A VF + ++D+VSWN++++G+ Q G A+E+ + M EN+KP +T+V+
Sbjct: 182 KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 246 VLSACAKKRDLEFGRWPN----------------------------EALSIFHELQLSKN 277
VL A + R + G+ + E + L +N
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 278 V--------------NPDEF--------------TFVSVLS---ACAQLGAMDIGVQIHA 306
V NP E T VSV+ ACA LG ++ G IH
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Query: 307 KMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGRE 366
+ G+ N + SLI MY KC +D A +F ++SR + W+ MI GFA G +
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID 421
Query: 367 ALDLFSRMQEAKVKPNAVTFTNVLCACSH--------------------------SGLVD 400
AL+ FS+M+ VKP+ T+ +V+ A + + LVD
Sbjct: 422 ALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVD 481
Query: 401 E---------GRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKM---PIV 448
R+ F+ M + V + M+D G G A+E E+M I
Sbjct: 482 MYAKCGAIMIARLIFDMMSERH-----VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 536
Query: 449 PGASVWGALLGACKIHENVELAEYACSHLL------ELEPENHGALVLLSNIYAKTGK-- 500
P + +++ AC H + A C +++ EL +++GA+V ++ + G+
Sbjct: 537 PNGVTFLSVISACS-HSGLVEAGLKCFYMMKENYSIELSMDHYGAMV---DLLGRAGRLN 592
Query: 501 --WDNVSEL 507
WD + ++
Sbjct: 593 EAWDFIMQM 601
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/639 (37%), Positives = 369/639 (57%), Gaps = 53/639 (8%)
Query: 18 SLPRHPNPTTLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLF 77
+ +H T+ N P+ LI +C ++++L QI +++ + D +KL
Sbjct: 17 TFTKHSKIDTVNTQN-------PIL-LISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLI 67
Query: 78 TPCALG-TFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYF 136
C T SS+ YAR +F+ + +P++ +N++ R YS P++ F +F++++ +
Sbjct: 68 NFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDG-IL 126
Query: 137 PNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCV 196
P+ +TFP ++KA A G+ +H + +K +D++++ +LI+ Y C D+ A CV
Sbjct: 127 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV 186
Query: 197 FVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDL 256
F I + VV +N+MI+G+ + + R
Sbjct: 187 FDRIVEPCVVCYNAMITGYAR----------------------------------RNR-- 210
Query: 257 EFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLN 316
PNEALS+F E+Q K + P+E T +SVLS+CA LG++D+G IH KK
Sbjct: 211 -----PNEALSLFREMQ-GKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 317 CYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQE 376
+ T+LIDM+ KCG+LD A+ +F ++ +D WS MI +A +G +++ +F RM+
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Query: 377 AKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLD 436
V+P+ +TF +L ACSH+G V+EGR +F+QM +G+VP +KHY MVD+L RAG L+
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLE 384
Query: 437 EAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYA 496
+A EFI+K+PI P +W LL AC H N++LAE + EL+ + G V+LSN+YA
Sbjct: 385 DAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Query: 497 KTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVA 556
+ KW+ V LRK M+ K PGCSSIEVN +H+F +G+ +++ LDE+V
Sbjct: 445 RNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVK 504
Query: 557 RLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCG 616
LK GYVP+ S ++ + +E L HSE+LAI +GL++ P IR+VKNLRVC
Sbjct: 505 ELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCR 564
Query: 617 DCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
DCH AKLIS ++ R+++LRD RFHHF G CSC D+W
Sbjct: 565 DCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/561 (41%), Positives = 347/561 (61%), Gaps = 21/561 (3%)
Query: 104 YTWNTLIRAYS---SSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQA 160
+ WN +IRA SS + ++L++ N P+ TFPF++ + + +GQ
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRM-RNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 161 IHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGF 220
H ++ + D F+ SL++ Y+ CGDL A VF G KD+ +WNS+++ + + G
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 221 FEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKN--- 277
+ A +L+ EM NV + +C + G++ EAL +F E+QL K
Sbjct: 144 IDDARKLFDEMPERNV---------ISWSCLINGYVMCGKY-KEALDLFREMQLPKPNEA 193
Query: 278 -VNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKA 336
V P+EFT +VLSAC +LGA++ G +HA + K ++++ L T+LIDMY KCG+L++A
Sbjct: 194 FVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 337 LEVFHTVKSR-DVFVWSTMIAGFAMYGCGREALDLFSRMQEA-KVKPNAVTFTNVLCACS 394
VF+ + S+ DV +S MI AMYG E LFS M + + PN+VTF +L AC
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
Query: 395 HSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVW 454
H GL++EG+ +F M +G+ P ++HY CMVD+ GR+GL+ EA FI MP+ P +W
Sbjct: 314 HRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 455 GALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVS 514
G+LL ++ +++ E A L+EL+P N GA VLLSN+YAKTG+W V +R M V
Sbjct: 374 GSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVK 433
Query: 515 GLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLV 574
G+ K PGCS +EV G +H+F+ G+ S + IY+ LDEI+ RL+ GYV + +L +
Sbjct: 434 GINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDL 493
Query: 575 EEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREIL 634
E+D +E AL+ HSE+LAIA+ L+ P P+RI+KNLR+CGDCH V K+ISKL++REI+
Sbjct: 494 NEKD-KEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIV 552
Query: 635 LRDRYRFHHFRGGNCSCMDYW 655
+RD RFHHFR G+CSC D+W
Sbjct: 553 VRDCNRFHHFRDGSCSCRDFW 573
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 48/282 (17%)
Query: 88 LEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSP----YFPNEFTFP 143
++ AR++FD++P+ N+ +W+ LI Y + ++ +F ++ P PNEFT
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 144 FVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIG-K 202
V+ A RL G+ +H + K E D+ + +LI YA CG L A VF +G K
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 203 KDVVSWNSMISGFVQGGFFEKAIELYREMEM-ENVKPDEVTMVAVLSACAKKRDLEFGRW 261
KDV ++++MI G ++ +L+ EM +N+ P+ VT V +L AC + +
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLI----- 318
Query: 262 PNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTT 321
NE S F + + P + G M
Sbjct: 319 -NEGKSYFKMMIEEFGITP----------SIQHYGCM----------------------- 344
Query: 322 SLIDMYTKCGNLDKALEVFHTVKSR-DVFVWSTMIAGFAMYG 362
+D+Y + G + +A ++ DV +W ++++G M G
Sbjct: 345 --VDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/571 (40%), Positives = 336/571 (58%), Gaps = 49/571 (8%)
Query: 85 FSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPF 144
F+ L A ++FDQ+PQ N+ +W T+I AYS + Q + L L+ PN +T+
Sbjct: 109 FNLLNDAHQLFDQMPQRNVISWTTMISAYSK-CKIHQKALELLVLMLRDNVRPNVYTYSS 167
Query: 145 VIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKD 204
V+++ + R+ +H +IK E D+F+ ++LI +A G+ A VF + D
Sbjct: 168 VLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGD 224
Query: 205 VVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNE 264
+ WNS+I GF Q + A+EL++ M+ ++ T+
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLT-------------------- 264
Query: 265 ALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLI 324
SVL AC L +++G+Q H + K L L +L+
Sbjct: 265 ----------------------SVLRACTGLALLELGMQAHVHIVKYDQDL--ILNNALV 300
Query: 325 DMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAV 384
DMY KCG+L+ AL VF+ +K RDV WSTMI+G A G +EAL LF RM+ + KPN +
Sbjct: 301 DMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYI 360
Query: 385 TFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEK 444
T VL ACSH+GL+++G +F M+ +YG+ P +HY CM+D+LG+AG LD+AV+ + +
Sbjct: 361 TIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNE 420
Query: 445 MPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNV 504
M P A W LLGAC++ N+ LAEYA ++ L+PE+ G LLSNIYA + KWD+V
Sbjct: 421 MECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSV 480
Query: 505 SELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYV 564
E+R MR G+KKEPGCS IEVN +IH F+ G++SHP E+ KL++++ RL GYV
Sbjct: 481 EEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYV 540
Query: 565 PNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKL 624
P + +LQ +E E + E +L HSE+LA+A+GL+++ + IRI KNLR+CGDCH KL
Sbjct: 541 PETNFVLQDLEGEQM-EDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599
Query: 625 ISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
SKL R I++RD R+HHF+ G CSC DYW
Sbjct: 600 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/625 (37%), Positives = 362/625 (57%), Gaps = 27/625 (4%)
Query: 40 PVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSAS---KLFTPCALGTFSSLEYAREMFD 96
P+ + + + + ++H + DP+ + ++ C + YAR +FD
Sbjct: 116 PILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCG-----RINYARNVFD 170
Query: 97 QIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFR 156
++ ++ TWNT+I Y ++F +F ++ +S P+E ++ A R R
Sbjct: 171 EMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 157 VGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFV 216
+AI+ +I++ D + +L+ YA G + MA F + +++ +M+SG+
Sbjct: 230 YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289
Query: 217 QGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSK 276
+ G + A ++ + E K D V ++SA + +P EAL +F E+ S
Sbjct: 290 KCGRLDDAQVIFDQTE----KKDLVCWTTMISAYVE------SDYPQEALRVFEEMCCS- 338
Query: 277 NVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKA 336
+ PD + SV+SACA LG +D +H+ + G++ + +LI+MY KCG LD
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 337 LEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHS 396
+VF + R+V WS+MI +M+G +AL LF+RM++ V+PN VTF VL CSHS
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 397 GLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGA 456
GLV+EG+ F M Y + P ++HY CMVD+ GRA LL EA+E IE MP+ +WG+
Sbjct: 459 GLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGS 518
Query: 457 LLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGL 516
L+ AC+IH +EL ++A +LELEP++ GALVL+SNIYA+ +W++V +R+ M +
Sbjct: 519 LMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNV 578
Query: 517 KKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEE 576
KE G S I+ NG+ H+FL G+ H EIY+KLDE+V++LK GYVP+ +L VEE
Sbjct: 579 FKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEE 638
Query: 577 EDVQEQALNLHSERLAIAYGLISVEPSQP------IRIVKNLRVCGDCHTVAKLISKLYN 630
E+ ++ L HSE+LA+ +GL++ E + IRIVKNLRVC DCH KL+SK+Y
Sbjct: 639 EEKKDLVL-WHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYE 697
Query: 631 REILLRDRYRFHHFRGGNCSCMDYW 655
REI++RDR RFH ++ G CSC DYW
Sbjct: 698 REIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 226/452 (50%), Gaps = 39/452 (8%)
Query: 48 CKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQP-NLYTW 106
CK++ +KQ+H +LRT + S LF + +L YA +F IP P +
Sbjct: 22 CKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVF 79
Query: 107 NTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVI 166
N +R S S+EP ++ ++F Q + + ++F+F ++KA +++ G +HG+
Sbjct: 80 NPFLRDLSRSSEP-RATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 167 KSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIE 226
K + D F+ + YA CG + A VF + +DVV+WN+MI + + G ++A +
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFK 198
Query: 227 LYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFV 286
L+ EM+ NV PDE+ + ++SAC + ++ + R +E + +V D
Sbjct: 199 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR-------AIYEFLIENDVRMDTHLLT 251
Query: 287 SVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSR 346
++++ A G MD+ + KM + N +++T+++ Y+KCG LD A +F + +
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 347 DVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFF 406
D+ W+TMI+ + +EAL +F M + +KP+ V+ +V+ AC++ G++D+ +
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 407 NQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIH-- 464
+ + V G+ + +++M + G LD + EKMP S W +++ A +H
Sbjct: 368 SCIH-VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS-WSSMINALSMHGE 425
Query: 465 -------------ENVELAE-------YACSH 476
ENVE E Y CSH
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSH 457
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/614 (37%), Positives = 354/614 (57%), Gaps = 45/614 (7%)
Query: 44 LIKQCKNIKQLKQIHTQMLRTGLFFDPYSASK-LFTPCA-LGTFSSLEYAREMFDQIPQP 101
L+K+C NI + KQ+H + ++ LF+ ++ + CA G +S+ YA +F I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 102 NLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAI 161
+ +NT+IR Y + + + F + P+ FT+P ++KA RL R G+ I
Sbjct: 96 CTFDFNTMIRGYVN-VMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQI 154
Query: 162 HGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFF 221
HG V K E D+F+ NSLI+ Y CG++ ++ VF + K SW+SM+S G +
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW 214
Query: 222 EKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPD 281
+ + L+R M E N+ +
Sbjct: 215 SECLLLFRGMCSET-----------------------------------------NLKAE 233
Query: 282 EFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFH 341
E VS L ACA GA+++G+ IH + + +LN + TSL+DMY KCG LDKAL +F
Sbjct: 234 ESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ 293
Query: 342 TVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDE 401
++ R+ +S MI+G A++G G AL +FS+M + ++P+ V + +VL ACSHSGLV E
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKE 353
Query: 402 GRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGAC 461
GR F +M V P +HY C+VD+LGRAGLL+EA+E I+ +PI +W L C
Sbjct: 354 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 413
Query: 462 KIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPG 521
++ +N+EL + A LL+L N G +L+SN+Y++ WD+V+ R + + GLK+ PG
Sbjct: 414 RVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPG 473
Query: 522 CSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQE 581
S +E+ G+ H+F++ + SHP CKEIY L ++ +LK GY P+ + +L V+EE+ +E
Sbjct: 474 FSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKE 533
Query: 582 QALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRF 641
+ L HS+++AIA+GL+ P I+I +NLR+C DCHT K IS +Y REI++RDR RF
Sbjct: 534 R-LKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRF 592
Query: 642 HHFRGGNCSCMDYW 655
H F+GG CSC DYW
Sbjct: 593 HLFKGGTCSCKDYW 606
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/617 (37%), Positives = 364/617 (58%), Gaps = 51/617 (8%)
Query: 43 SLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPN 102
++++ +KQL+Q+H ++ TG +KL T + ++ Y +F +P P+
Sbjct: 14 AIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLAC--SARAIAYTHLLFLSVPLPD 71
Query: 103 LYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIH 162
+ +N++I++ S P+ + +++ +S P+ +TF VIK+ A L R+G+ +H
Sbjct: 72 DFLFNSVIKSTSKLRLPLHCVAYYRRML-SSNVSPSNYTFTSVIKSCADLSALRIGKGVH 130
Query: 163 GMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFE 222
+ S F D ++ +L+ FY+ CGD+ A VF + +K +V+WNS++SGF Q G
Sbjct: 131 CHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL-- 188
Query: 223 KAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDE 282
+EA+ +F++++ S PD
Sbjct: 189 ---------------------------------------ADEAIQVFYQMRES-GFEPDS 208
Query: 283 FTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHT 342
TFVS+LSACAQ GA+ +G +H + +G+ LN L T+LI++Y++CG++ KA EVF
Sbjct: 209 ATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDK 268
Query: 343 VKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQE-AKVKPNAVTFTNVLCACSHSGLVDE 401
+K +V W+ MI+ + +G G++A++LF++M++ PN VTF VL AC+H+GLV+E
Sbjct: 269 MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
Query: 402 GRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGAS---VWGALL 458
GR + +M Y ++PGV+H+ CMVDMLGRAG LDEA +FI ++ A+ +W A+L
Sbjct: 329 GRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 459 GACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKK 518
GACK+H N +L L+ LEP+N G V+LSNIYA +GK D VS +R M + L+K
Sbjct: 389 GACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRK 448
Query: 519 EPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEED 578
+ G S IEV + + F G+ SH EIY L+ +++R K GY P ++ VEEE+
Sbjct: 449 QVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEE 508
Query: 579 VQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDR 638
+E AL HSE+LA+A+GL+ I IVKNLR+C DCH+ K IS + NR+I +RD+
Sbjct: 509 -KEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDK 566
Query: 639 YRFHHFRGGNCSCMDYW 655
RFHHF+ G+CSC+DYW
Sbjct: 567 LRFHHFQNGSCSCLDYW 583
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/628 (37%), Positives = 350/628 (55%), Gaps = 59/628 (9%)
Query: 85 FSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPF 144
F +E AR++FD++P+ + WNT+I Y + ++S +F L+ S + T
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 145 VIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKD 204
++ A A L + R+G IH + K+ ++ I Y+ CG + M +F K D
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 205 VVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMV-------------------- 244
+V++N+MI G+ G E ++ L++E+ + + T+V
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCL 346
Query: 245 ------------AVLSACAKKRDLEFGR-------------W------------PNEALS 267
A+ + +K ++E R W +A+S
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 268 IFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMY 327
+F E+Q S+ +P+ T +LSACAQLGA+ +G +H ++ + + Y++T+LI MY
Sbjct: 407 LFREMQKSE-FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 328 TKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFT 387
KCG++ +A +F + ++ W+TMI+G+ ++G G+EAL++F M + + P VTF
Sbjct: 466 AKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
Query: 388 NVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPI 447
VL ACSH+GLV EG FN M YG P VKHY CMVD+LGRAG L A++FIE M I
Sbjct: 526 CVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585
Query: 448 VPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSEL 507
PG+SVW LLGAC+IH++ LA L EL+P+N G VLLSNI++ + + +
Sbjct: 586 EPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATV 645
Query: 508 RKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNR 567
R+ + L K PG + IE+ H F +G+ SHP KEIY KL+++ +++ GY P
Sbjct: 646 RQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPET 705
Query: 568 SHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISK 627
L VEEE+ +E + +HSERLAIA+GLI+ EP IRI+KNLRVC DCHTV KLISK
Sbjct: 706 ELALHDVEEEE-RELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISK 764
Query: 628 LYNREILLRDRYRFHHFRGGNCSCMDYW 655
+ R I++RD RFHHF+ G CSC DYW
Sbjct: 765 ITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 161/359 (44%), Gaps = 45/359 (12%)
Query: 42 FSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQP 101
K+ +I L Q H Q++ G D +KL L ++ YAR++F + +P
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQ--RLSDLGAIYYARDIFLSVQRP 81
Query: 102 NLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAI 161
+++ +N L+R +S + P S +F L ++ PN T+ F I AA+ R G+ I
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 162 HGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFF 221
HG + + +L + ++++ Y + A VF + +KD + WN+MISG+ + +
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 222 EKAIELYREMEMEN-VKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNP 280
++I+++R++ E+ + D T++ +L A A+ ++L
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELR----------------------- 238
Query: 281 DEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVF 340
+G+QIH+ K G + Y+ T I +Y+KCG + +F
Sbjct: 239 -------------------LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 341 HTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLV 399
+ D+ ++ MI G+ G +L LF + + + + T +++ H L+
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 109/245 (44%), Gaps = 17/245 (6%)
Query: 151 RLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNS 210
R V + ++ K+++ D S S+ H LA + ++ G ++ +S
Sbjct: 4 RTVSSATAETTAALISKNTYLDFFKRSTSISH-------LAQTHAQIILHGFRNDIS--- 53
Query: 211 MISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFH 270
+++ Q AI R++ + +PD V + VL R P+ +LS+F
Sbjct: 54 LLTKLTQRLSDLGAIYYARDIFLSVQRPD-VFLFNVL-----MRGFSVNESPHSSLSVFA 107
Query: 271 ELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKC 330
L+ S ++ P+ T+ +SA + G IH + G L ++++ MY K
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF 167
Query: 331 GNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRM-QEAKVKPNAVTFTNV 389
++ A +VF + +D +W+TMI+G+ E++ +F + E+ + + T ++
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDI 227
Query: 390 LCACS 394
L A +
Sbjct: 228 LPAVA 232
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/640 (37%), Positives = 348/640 (54%), Gaps = 68/640 (10%)
Query: 76 LFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPY 135
L+ CA +E A + F + N+ WN ++ AY + SF IF Q+
Sbjct: 433 LYAKCA-----DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI-EEI 486
Query: 136 FPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYC 195
PN++T+P ++K RL +G+ IH +IK++F+ + ++ + LI YA G L A+
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWD 546
Query: 196 VFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEV-------------- 241
+ + KDVVSW +MI+G+ Q F +KA+ +R+M ++ DEV
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 242 ------------------------TMVAVLSACAKKRD--LEFGR--------WP----- 262
+V + S C K + L F + W
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 263 -------NEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKL 315
EAL +F + + ++ + FTF S + A ++ M G Q+HA + K G
Sbjct: 667 FQQSGNNEEALRVFVRMN-REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 725
Query: 316 NCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQ 375
+ +LI MY KCG++ A + F V +++ W+ +I ++ +G G EALD F +M
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785
Query: 376 EAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLL 435
+ V+PN VT VL ACSH GLVD+G +F M YG+ P +HY C+VDML RAGLL
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845
Query: 436 DEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIY 495
A EFI++MPI P A VW LL AC +H+N+E+ E+A HLLELEPE+ VLLSN+Y
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 496 AKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIV 555
A + KWD R+ M+ G+KKEPG S IEV IH F G+ +HPL EI+ ++
Sbjct: 906 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 965
Query: 556 ARLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVC 615
R GYV + LL ++ E ++ + +HSE+LAI++GL+S+ + PI ++KNLRVC
Sbjct: 966 KRASEIGYVQDCFSLLNELQHEQ-KDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVC 1024
Query: 616 GDCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
DCH K +SK+ NREI++RD YRFHHF GG CSC DYW
Sbjct: 1025 NDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 222/478 (46%), Gaps = 68/478 (14%)
Query: 54 LKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAY 113
++QIH ++L GL + L + F L AR +FD + + +W +I
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL--ARRVFDGLRLKDHSSWVAMISGL 263
Query: 114 SSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDD 173
S + ++ +F + Y P + F V+ A ++ +G+ +HG+V+K F D
Sbjct: 264 SKNECEAEAIRLFCDM-YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 174 LFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEM 233
++ N+L+ Y G+L A +F + ++D V++N++I+G Q G+ EKA+EL++ M +
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 234 ENVKPDEVTMV-----------------------------------AVLSACAKKRDLE- 257
+ ++PD T+ A+L+ AK D+E
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 258 ----------------------FGRWPN--EALSIFHELQLSKNVNPDEFTFVSVLSACA 293
+G + + IF ++Q+ + V P+++T+ S+L C
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCI 501
Query: 294 QLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWST 353
+LG +++G QIH+++ K +LN Y+ + LIDMY K G LD A ++ +DV W+T
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTT 561
Query: 354 MIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVY 413
MIAG+ Y +AL F +M + ++ + V TN + AC+ + EG+ Q V
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA-CVS 620
Query: 414 GVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASV-WGALLGACKIHENVELA 470
G + +V + R G ++E+ E+ G ++ W AL+ + N E A
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE--AGDNIAWNALVSGFQQSGNNEEA 676
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 218/498 (43%), Gaps = 80/498 (16%)
Query: 45 IKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLY 104
+K ++ + +++H+Q+L+ GL + + KLF L A ++FD++P+ ++
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK--GDLYGAFKVFDEMPERTIF 152
Query: 105 TWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAA-ARLVQFRVGQAIHG 163
TWN +I+ +S + F +F+++V + PNE TF V++A V F V + IH
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMV-SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHA 211
Query: 164 MVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEK 223
++ D + N LI Y+ G + +A VF + KD SW +MISG + +
Sbjct: 212 RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAE 271
Query: 224 AIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEF 283
AI L+ +M + + P +VLSAC K LE
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE-------------------------- 305
Query: 284 TFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTV 343
IG Q+H + K G + Y+ +L+ +Y GNL A +F +
Sbjct: 306 ----------------IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 344 KSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGR 403
RD ++T+I G + G G +A++LF RM ++P++ T +++ ACS G + G+
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 404 MFF-----------NQMEPV----------------YGVVPGVKHYTCMVDMLGRAGLLD 436
N++E Y + V++ ML GLLD
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 437 E---AVEFIEKM---PIVPGASVWGALLGACKIHENVELAEYACSHLLELEPE-NHGALV 489
+ + +M IVP + ++L C ++EL E S +++ + N
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 490 LLSNIYAKTGKWDNVSEL 507
+L ++YAK GK D ++
Sbjct: 530 VLIDMYAKLGKLDTAWDI 547
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 135/289 (46%), Gaps = 38/289 (13%)
Query: 45 IKQCKNIKQLK---QIHTQMLRTGLFFD-PYSAS--KLFTPCALGTFSSLEYAREMFDQI 98
+ C ++ LK QIH Q +G D P+ + L++ C +E + F+Q
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG-----KIEESYLAFEQT 652
Query: 99 PQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVG 158
+ WN L+ + S ++ +F+++ N FTF +KAA+ + G
Sbjct: 653 EAGDNIAWNALVSGFQQSGNNEEALRVFVRM-NREGIDNNNFTFGSAVKAASETANMKQG 711
Query: 159 QAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQG 218
+ +H ++ K+ ++ + + N+LI YA CG ++ A F+ + K+ VSWN++I+ + +
Sbjct: 712 KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKH 771
Query: 219 GFFEKAIELYREMEMENVKPDEVTMVAVLSACA------------KKRDLEFGRWPNEA- 265
GF +A++ + +M NV+P+ VT+V VLSAC+ + + E+G P
Sbjct: 772 GFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEH 831
Query: 266 -------------LSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIG 301
LS E + PD + ++LSAC M+IG
Sbjct: 832 YVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIG 880
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 275 SKNVNPDEFTFVSVLSACAQL-GAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNL 333
++ + P+ T +L C + G++D G ++H+++ K G+ N L+ L D Y G+L
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 334 DKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCAC 393
A +VF + R +F W+ MI A E LF RM V PN TF+ VL AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 394 SHSGLVDEGRMFFNQMEPVYGVV--PGVKHYTC----MVDMLGRAGLLDEAVEFIEKMPI 447
G + F+ +E ++ + G++ T ++D+ R G +D A + + +
Sbjct: 197 RG------GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL 250
Query: 448 VPGASVWGALLGACKIHE 465
+S W A++ +E
Sbjct: 251 KDHSS-WVAMISGLSKNE 267
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/570 (39%), Positives = 346/570 (60%), Gaps = 12/570 (2%)
Query: 86 SSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFV 145
++++ A+ +FD+ NL N + Y ++ +F L+ +S P+ +
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSA 343
Query: 146 IKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDV 205
I + ++L G++ HG V+++ FE I N+LI Y C A+ +F + K V
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 206 VSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEA 265
V+WNS+++G+V+ G + A E + M +N+ V+ ++S + G EA
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQ------GSLFEEA 453
Query: 266 LSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLID 325
+ +F +Q + VN D T +S+ SAC LGA+D+ I+ ++K GI+L+ L T+L+D
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 326 MYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVT 385
M+++CG+ + A+ +F+++ +RDV W+ I AM G A++LF M E +KP+ V
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 386 FTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKM 445
F L ACSH GLV +G+ F M ++GV P HY CMVD+LGRAGLL+EAV+ IE M
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 446 PIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVS 505
P+ P +W +LL AC++ NVE+A YA + L PE G+ VLLSN+YA G+W++++
Sbjct: 634 PMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMA 693
Query: 506 ELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVP 565
++R M+ GL+K PG SSI++ G+ H+F +G+ SHP I + LDE+ R G+VP
Sbjct: 694 KVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVP 753
Query: 566 NRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLI 625
+ S++L V+E++ + L+ HSE+LA+AYGLIS IRIVKNLRVC DCH+ AK
Sbjct: 754 DLSNVLMDVDEKE-KIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFA 812
Query: 626 SKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
SK+YNREI+LRD RFH+ R G CSC D+W
Sbjct: 813 SKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 203/387 (52%), Gaps = 50/387 (12%)
Query: 12 LSTPVISLPRHPNPTTLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPY 71
LS V++ P+ L + + P S +K CK I +LK H + + GL D
Sbjct: 10 LSPMVLATTTTTKPSLLNQSKCTKATP----SSLKNCKTIDELKMFHRSLTKQGLDNDVS 65
Query: 72 SASKLFT-PCALGTFSSLEYAREMFDQIPQ-PNLYTWNTLIRAYSSSAEPIQSFMIFLQL 129
+ +KL C LGT SL +A+E+F+ + +N+LIR Y+SS ++ ++FL++
Sbjct: 66 TITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM 125
Query: 130 VYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGD 189
+ NS P+++TFPF + A A+ G IHG+++K + DLF+ NSL+HFYA CG+
Sbjct: 126 M-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 190 LAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIEL-YREMEMENVKPDEVTMVAVLS 248
L A VF + +++VVSW SMI G+ + F + A++L +R + E V P+ VTMV V+S
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 249 ACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKM 308
ACAK DLE G +++A +
Sbjct: 245 ACAKLEDLETGE------------------------------------------KVYAFI 262
Query: 309 KKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREAL 368
+ GI++N + ++L+DMY KC +D A +F + ++ + + M + + G REAL
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 369 DLFSRMQEAKVKPNAVTFTNVLCACSH 395
+F+ M ++ V+P+ ++ + + +CS
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 182/383 (47%), Gaps = 23/383 (6%)
Query: 56 QIHTQMLRTGLFFDPYSASKL---FTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRA 112
QIH +++ G D + + L + C L+ AR++FD++ + N+ +W ++I
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECG-----ELDSARKVFDEMSERNVVSWTSMICG 209
Query: 113 YSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFE- 171
Y+ + +F ++V + PN T VI A A+L G+ ++ + S E
Sbjct: 210 YARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 172 DDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREM 231
+DL +S +L+ Y C + +A +F G ++ N+M S +V+ G +A+ ++ M
Sbjct: 270 NDLMVS-ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 232 EMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSA 291
V+PD ++M++ +S+C++ R++ +G+ H L + +++
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGK-------SCHGYVLRNGFESWDNICNALIDM 381
Query: 292 CAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVW 351
+ D +I +M + + S++ Y + G +D A E F T+ +++ W
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTV----VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 352 STMIAGFAMYGCGREALDLFSRMQ-EAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQME 410
+T+I+G EA+++F MQ + V + VT ++ AC H G +D + + +E
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 411 PVYGVVPGVKHYTCMVDMLGRAG 433
G+ V+ T +VDM R G
Sbjct: 498 K-NGIQLDVRLGTTLVDMFSRCG 519
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 104/189 (55%), Gaps = 15/189 (7%)
Query: 263 NEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTS 322
NEA+ +F + ++ ++PD++TF LSACA+ A G+QIH + K G + ++ S
Sbjct: 116 NEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNS 174
Query: 323 LIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRM-QEAKVKP 381
L+ Y +CG LD A +VF + R+V W++MI G+A ++A+DLF RM ++ +V P
Sbjct: 175 LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTP 234
Query: 382 NAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVV--PGVK----HYTCMVDMLGRAGLL 435
N+VT V+ AC+ ++ G E VY + G++ + +VDM + +
Sbjct: 235 NSVTMVCVISACAKLEDLETG-------EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 436 DEAVEFIEK 444
D A ++
Sbjct: 288 DVAKRLFDE 296
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 48/210 (22%)
Query: 305 HAKMKKQGIKLNCYLTTSLIDMYTKCG---NLDKALEVFHTVKSRDV-FVWSTMIAGFAM 360
H + KQG+ + T L+ + G +L A EVF +S F+++++I G+A
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 361 YGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHS------------------------ 396
G EA+ LF RM + + P+ TF L AC+ S
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 397 -----------GLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKM 445
G +D R F++M V +T M+ R +AV+ +M
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSE-----RNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 446 ----PIVPGASVWGALLGACKIHENVELAE 471
+ P + ++ AC E++E E
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGE 256
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/621 (38%), Positives = 358/621 (57%), Gaps = 54/621 (8%)
Query: 45 IKQCKNIKQL---KQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQP 101
IK C ++ + KQ H Q G D + +S L T LE AR++FD+IP+
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIV--MYSTCGKLEDARKVFDEIPKR 140
Query: 102 NLYTWNTLIRAYSSSAEPIQSFMIFLQLVYN-----SPYFPNEFTFPFVIKAAARLVQFR 156
N+ +W ++IR Y + + + +F L+ + F + VI A +R+
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 157 VGQAIHGMVIKSSFEDDLFISNSLIHFYAICGD--LAMAYCVFVMIGKKDVVSWNSMISG 214
+ ++IH VIK F+ + + N+L+ YA G+ +A+A +F I KD VS+NS++S
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 215 FVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQL 274
+ Q G NEA +F L
Sbjct: 261 YAQSGM-----------------------------------------SNEAFEVFRRLVK 279
Query: 275 SKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLD 334
+K V + T +VL A + GA+ IG IH ++ + G++ + + TS+IDMY KCG ++
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 335 KALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACS 394
A + F +K+++V W+ MIAG+ M+G +AL+LF M ++ V+PN +TF +VL ACS
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 395 HSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVW 454
H+GL EG +FN M+ +GV PG++HY CMVD+LGRAG L +A + I++M + P + +W
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 455 GALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVS 514
+LL AC+IH+NVELAE + + L EL+ N G +LLS+IYA G+W +V +R M+
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 515 GLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLV 574
GL K PG S +E+NGE+H FL G+ HP ++IY L E+ +L GYV N S + V
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV 579
Query: 575 EEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREIL 634
+EE+ +E L +HSE+LAIA+G+++ P + +VKNLRVC DCH V KLISK+ +RE +
Sbjct: 580 DEEE-KEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638
Query: 635 LRDRYRFHHFRGGNCSCMDYW 655
+RD RFHHF+ G CSC DYW
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 4/225 (1%)
Query: 43 SLIKQCKNI--KQLKQ-IHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIP 99
S+I C + K L + IH+ +++ G + L A G + AR++FDQI
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV 247
Query: 100 QPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQ 159
+ ++N+++ Y+ S ++F +F +LV N N T V+ A + R+G+
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 160 AIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGG 219
IH VI+ EDD+ + S+I Y CG + A F + K+V SW +MI+G+ G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 220 FFEKAIELYREMEMENVKPDEVTMVAVLSACAKKR-DLEFGRWPN 263
KA+EL+ M V+P+ +T V+VL+AC+ +E RW N
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 412
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/673 (35%), Positives = 367/673 (54%), Gaps = 65/673 (9%)
Query: 43 SLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPN 102
+LI + LKQIH ++ L D + + L F +Y+ +F PN
Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLF--FRQTKYSYLLFSHTQFPN 75
Query: 103 LYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIH 162
++ +N+LI + ++ ++ +FL + + Y + FTFP V+KA R ++G +H
Sbjct: 76 IFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYL-HGFTFPLVLKACTRASSRKLGIDLH 134
Query: 163 GMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFE 222
+V+K F D+ SL+ Y+ G L A+ +F I + VV+W ++ SG+ G
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 223 KAIELYREMEMENVKPD--------------------------------------EVTMV 244
+AI+L+++M VKPD T+V
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 245 AVLSACAK------------KRDL----------EFGRWPNEALSIFHELQLSKNVNPDE 282
+ + C K ++D+ +P E + +F ++ L +N+ PD+
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM-LQENLKPDQ 313
Query: 283 FTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHT 342
F+ V LS+CA LGA+D+G + + + N ++ +LIDMY KCG + + EVF
Sbjct: 314 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373
Query: 343 VKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEG 402
+K +D+ + + I+G A G + + +F + ++ + P+ TF +LC C H+GL+ +G
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433
Query: 403 RMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACK 462
FFN + VY + V+HY CMVD+ GRAG+LD+A I MP+ P A VWGALL C+
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493
Query: 463 IHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGC 522
+ ++ +LAE L+ LEP N G V LSNIY+ G+WD +E+R M G+KK PG
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 553
Query: 523 SSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQEQ 582
S IE+ G++H+FLA + SHPL +IY+KL+++ ++ G+VP + VEEE+ +E+
Sbjct: 554 SWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEE-KER 612
Query: 583 ALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRFH 642
L HSE+LA+A GLIS + Q IR+VKNLRVCGDCH V KLISK+ REI++RD RFH
Sbjct: 613 VLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFH 672
Query: 643 HFRGGNCSCMDYW 655
F G+CSC DYW
Sbjct: 673 CFTNGSCSCNDYW 685
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/631 (36%), Positives = 347/631 (54%), Gaps = 45/631 (7%)
Query: 27 TLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTF- 85
+++ ++G H + SLI L+QIH +LRT L + + AL
Sbjct: 4 SISSSSGDDH----LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIP 59
Query: 86 SSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFV 145
+ Y+ +F Q P L NT+IRA+S S P + F +F L NS N + F
Sbjct: 60 RDINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFA 119
Query: 146 IKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDV 205
+K + G IHG + F D + +L+ Y+ C + A VF I K+D
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 206 VSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEA 265
VSWN + S +++ + L+ +M+ + + C K
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKND------------VDGCVK------------- 214
Query: 266 LSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLID 325
PD T + L ACA LGA+D G Q+H + + G+ L+ +L+
Sbjct: 215 --------------PDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVS 260
Query: 326 MYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVT 385
MY++CG++DKA +VF+ ++ R+V W+ +I+G AM G G+EA++ F+ M + + P T
Sbjct: 261 MYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQT 320
Query: 386 FTNVLCACSHSGLVDEGRMFFNQMEP-VYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEK 444
T +L ACSHSGLV EG MFF++M + + P + HY C+VD+LGRA LLD+A I+
Sbjct: 321 LTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKS 380
Query: 445 MPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNV 504
M + P +++W LLGAC++H +VEL E SHL+EL+ E G VLL N Y+ GKW+ V
Sbjct: 381 MEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKV 440
Query: 505 SELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYV 564
+ELR M+ + +PGCS+IE+ G +H+F+ + SHP +EIY L EI +LK GYV
Sbjct: 441 TELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYV 500
Query: 565 PNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKL 624
+ L +E E+ + AL HSE+LAIA+G++ P IR+ KNLR C DCH AK
Sbjct: 501 AEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKF 560
Query: 625 ISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
+S +Y+R +++RDR RFHHF+GG+CSC D+W
Sbjct: 561 VSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/624 (37%), Positives = 351/624 (56%), Gaps = 27/624 (4%)
Query: 41 VFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQ 100
+ S + C N+ Q+KQIH +LR GL Y +KL YAR + + +
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQF 111
Query: 101 PNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQA 160
N + W +IR Y+ + ++ ++ + P FTF ++KA + +G+
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMY-GCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 161 IHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGF 220
H + +++ N++I Y C + A VF + ++DV+SW +I+ + + G
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 221 FEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNP 280
E A EL+ + + D V A+++ A+ P EAL F ++ S +
Sbjct: 231 MECAAELFESLPTK----DMVAWTAMVTGFAQNAK------PQEALEYFDRMEKS-GIRA 279
Query: 281 DEFTFVSVLSACAQLGA---MDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKAL 337
DE T +SACAQLGA D VQI A+ + + ++LIDMY+KCGN+++A+
Sbjct: 280 DEVTVAGYISACAQLGASKYADRAVQI-AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAV 338
Query: 338 EVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRM-QEAKVKPNAVTFTNVLCACSHS 396
VF ++ +++VF +S+MI G A +G +EAL LF M + ++KPN VTF L ACSHS
Sbjct: 339 NVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHS 398
Query: 397 GLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGA 456
GLVD+GR F+ M +GV P HYTCMVD+LGR G L EA+E I+ M + P VWGA
Sbjct: 399 GLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGA 458
Query: 457 LLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGL 516
LLGAC+IH N E+AE A HL ELEP+ G +LLSN+YA G W V +RK ++ GL
Sbjct: 459 LLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGL 518
Query: 517 KKEPGCS-SIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVE 575
KK P S ++ NG++HKF G +HP+ +I KL+E+V RL GY P+ S +
Sbjct: 519 KKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSV----- 573
Query: 576 EEDVQEQALNL----HSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNR 631
DV + A L H+E+LA+A+ L++ I I+KNLR+C DCH +L S++ +
Sbjct: 574 PYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGK 633
Query: 632 EILLRDRYRFHHFRGGNCSCMDYW 655
I++RD RFHHFR G+CSC D+W
Sbjct: 634 VIIMRDNMRFHHFRSGDCSCGDFW 657
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/609 (37%), Positives = 340/609 (55%), Gaps = 43/609 (7%)
Query: 58 HTQMLRTGLFFDPYSASK------LFTPCALGTF----SSLEYAREMFDQIPQPNLYTWN 107
H +MLRTG Y+ F AL + R +FD + + WN
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373
Query: 108 TLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIK 167
+I YS + ++ ++F+ + ++ N T V+ A R F +AIHG V+K
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433
Query: 168 SSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIEL 227
+ D F+ N+L+ Y+ G + +A +F + +D+V+WN+MI+G+V E A+ L
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493
Query: 228 YREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVS 287
+M+ K +S A + L+ P+ T ++
Sbjct: 494 LHKMQNLERK---------VSKGASRVSLK----------------------PNSITLMT 522
Query: 288 VLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRD 347
+L +CA L A+ G +IHA K + + + ++L+DMY KCG L + +VF + ++
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 582
Query: 348 VFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFN 407
V W+ +I + M+G G+EA+DL M VKPN VTF +V ACSHSG+VDEG F
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 642
Query: 408 QMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMP-IVPGASVWGALLGACKIHEN 466
M+P YGV P HY C+VD+LGRAG + EA + + MP A W +LLGA +IH N
Sbjct: 643 VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
Query: 467 VELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSIE 526
+E+ E A +L++LEP VLL+NIY+ G WD +E+R++M+ G++KEPGCS IE
Sbjct: 703 LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Query: 527 VNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQEQALNL 586
E+HKF+AG+SSHP +++ L+ + R++ GYVP+ S +L V EED +E L
Sbjct: 763 HGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNV-EEDEKEILLCG 821
Query: 587 HSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRFHHFRG 646
HSE+LAIA+G+++ P IR+ KNLRVC DCH K ISK+ +REI+LRD RFH F+
Sbjct: 822 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 881
Query: 647 GNCSCMDYW 655
G CSC DYW
Sbjct: 882 GTCSCGDYW 890
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 191/421 (45%), Gaps = 74/421 (17%)
Query: 43 SLIKQCKNIKQL---KQIHTQMLRTGLFFDPYSASK----LFTPCALGTFSSLEYAREMF 95
+L+K +++ + KQIH + + G D + + L+ C G F ++ ++F
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC--GDFGAV---YKVF 156
Query: 96 DQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQ- 154
D+I + N +WN+LI + S + + F + + + P+ FT V+ A + L
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 155 --FRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMI 212
+G+ +H ++ E + FI N+L+ Y G LA + + G +D+V+WN+++
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 213 SGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHEL 272
S S C ++ LE AL E+
Sbjct: 275 S----------------------------------SLCQNEQLLE-------ALEYLREM 293
Query: 273 QLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQG-IKLNCYLTTSLIDMYTKCG 331
L + V PDEFT SVL AC+ L + G ++HA K G + N ++ ++L+DMY C
Sbjct: 294 VL-EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 332 NLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQE-AKVKPNAVTFTNVL 390
+ VF + R + +W+ MIAG++ +EAL LF M+E A + N+ T V+
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 391 CACSHSGLVDEGRMFFNQMEPVYGVV--PGVKH----YTCMVDMLGRAGLLDEAVEFIEK 444
AC SG F++ E ++G V G+ ++DM R G +D A+ K
Sbjct: 413 PACVRSGA-------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGK 465
Query: 445 M 445
M
Sbjct: 466 M 466
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 20/268 (7%)
Query: 55 KQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYS 114
+ IH +++ GL D + + L ++ A +F ++ +L TWNT+I Y
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMD--MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 115 SSAEPIQSFMIFLQLVYN-----------SPYFPNEFTFPFVIKAAARLVQFRVGQAIHG 163
S E + ++ L + N PN T ++ + A L G+ IH
Sbjct: 483 FS-EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 164 MVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEK 223
IK++ D+ + ++L+ YA CG L M+ VF I +K+V++WN +I + G ++
Sbjct: 542 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQE 601
Query: 224 AIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEF 283
AI+L R M ++ VKP+EVT ++V +AC+ ++ E L IF+ ++ V P
Sbjct: 602 AIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD------EGLRIFYVMKPDYGVEPSSD 655
Query: 284 TFVSVLSACAQLGAMDIGVQIHAKMKKQ 311
+ V+ + G + Q+ M +
Sbjct: 656 HYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 278 VNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCY-LTTSLIDMYTKCGNLDKA 336
+ PD + F ++L A A L M++G QIHA + K G ++ + +L+++Y KCG+
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 337 LEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHS 396
+VF + R+ W+++I+ + AL+ F M + V+P++ T +V+ ACS+
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 397 GLVDEGRMFFNQMEPVYGVVPGVKH---YTCMVDMLGRAGLLDEAVEFIEKMPIVPGASV 453
+ EG M Q+ YG+ G + +V M G+ G L + +
Sbjct: 213 PM-PEGLMMGKQVH-AYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVT 269
Query: 454 WGALLGA-CKIHENVELAEYACSHLLE-LEPE 483
W +L + C+ + +E EY +LE +EP+
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/622 (36%), Positives = 353/622 (56%), Gaps = 51/622 (8%)
Query: 39 HPVFSLIKQCKNIKQLK---QIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMF 95
H +L+ C + + L+ ++H M++T Y ++L G LE AR++
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLI--FYGKCDCLEDARKVL 110
Query: 96 DQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQF 155
D++P+ N+ +W +I YS + ++ +F +++ S PNEFTF V+ + R
Sbjct: 111 DEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMM-RSDGKPNEFTFATVLTSCIRASGL 169
Query: 156 RVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGF 215
+G+ IHG+++K +++ +F+ +SL+ YA G + A +F + ++DVVS ++I+G+
Sbjct: 170 GLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGY 229
Query: 216 VQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLS 275
Q G E EAL +FH L S
Sbjct: 230 AQLGLDE-----------------------------------------EALEMFHRLH-S 247
Query: 276 KNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDK 335
+ ++P+ T+ S+L+A + L +D G Q H + ++ + L SLIDMY+KCGNL
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 307
Query: 336 ALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQ-EAKVKPNAVTFTNVLCACS 394
A +F + R W+ M+ G++ +G GRE L+LF M+ E +VKP+AVT VL CS
Sbjct: 308 ARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Query: 395 HSGLVDEGRMFFNQM-EPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASV 453
H + D G F+ M YG PG +HY C+VDMLGRAG +DEA EFI++MP P A V
Sbjct: 368 HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV 427
Query: 454 WGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRV 513
G+LLGAC++H +V++ E L+E+EPEN G V+LSN+YA G+W +V+ +R M
Sbjct: 428 LGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQ 487
Query: 514 SGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQL 573
+ KEPG S I+ +H F A + +HP +E+ +K+ EI ++K GYVP+ S +L
Sbjct: 488 KAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYD 547
Query: 574 VEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREI 633
V+EE +E+ L HSE+LA+ +GLI+ PIR+ KNLR+C DCH AK+ SK++ RE+
Sbjct: 548 VDEEQ-KEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREV 606
Query: 634 LLRDRYRFHHFRGGNCSCMDYW 655
LRD+ RFH G CSC DYW
Sbjct: 607 SLRDKNRFHQIVDGICSCGDYW 628
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/657 (35%), Positives = 367/657 (55%), Gaps = 66/657 (10%)
Query: 19 LPRHPNPTTLTVNNG--------------------HQHHPHPVFSLIKQCKNIKQLKQIH 58
LPR N ++L+ N +++ H + L + + + K H
Sbjct: 25 LPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACH 84
Query: 59 TQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAE 118
+++R L D + L + F +E AR++FD + + +L +WNT+I Y+ +
Sbjct: 85 GKIIRIDLEGDVTLLNVLINAYSKCGF--VELARQVFDGMLERSLVSWNTMIGLYTRNRM 142
Query: 119 PIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISN 178
++ IFL++ N + +EFT V+ A + +H + +K+ + +L++
Sbjct: 143 ESEALDIFLEM-RNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGT 201
Query: 179 SLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKP 238
+L+ YA CG + A VF + K V+W+SM++G+VQ +E+A+ LYR
Sbjct: 202 ALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR-------- 253
Query: 239 DEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAM 298
A++ LE ++FT SV+ AC+ L A+
Sbjct: 254 ------------AQRMSLE----------------------QNQFTLSSVICACSNLAAL 279
Query: 299 DIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGF 358
G Q+HA + K G N ++ +S +DMY KCG+L ++ +F V+ +++ +W+T+I+GF
Sbjct: 280 IEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGF 339
Query: 359 AMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPG 418
A + +E + LF +MQ+ + PN VTF+++L C H+GLV+EGR FF M YG+ P
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 399
Query: 419 VKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLL 478
V HY+CMVD+LGRAGLL EA E I+ +P P AS+WG+LL +C++++N+ELAE A L
Sbjct: 400 VVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLF 459
Query: 479 ELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGE 538
ELEPEN G VLLSNIYA +W+ +++ RK +R +KK G S I++ ++H F GE
Sbjct: 460 ELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGE 519
Query: 539 SSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLI 598
S HP +EI S LD +V + + FGY P+ H L VE +E+ L HSE+LA+ +GL+
Sbjct: 520 SGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGK-KEELLMQHSEKLALVFGLM 578
Query: 599 SVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
+ S P+RI+KNLR+C DCH K S R I++RD RFHHF G+CSC D+W
Sbjct: 579 CLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/620 (36%), Positives = 342/620 (55%), Gaps = 49/620 (7%)
Query: 41 VFSLIKQCKNIKQLKQIHTQMLRTGLFFD-PYSASKLFTPCALGTFSSLEYAREMFDQIP 99
VFS + +N+ KQ+H+ +R+GL D S ++ C+ S++ R++FD++
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSAD--GSVDDCRKVFDRME 332
Query: 100 QPNLYTWNTLIRAYSSSAE-PIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVG 158
++ +W LI Y + ++ +F +++ PN FTF KA L RVG
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 159 QAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQG 218
+ + G K + ++NS+I + + A F + +K++VS+N+ + G +
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 219 GFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNV 278
FE+A +L E+ + +
Sbjct: 453 LNFEQAFKLLSEIT------------------------------------------EREL 470
Query: 279 NPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALE 338
FTF S+LS A +G++ G QIH+++ K G+ N + +LI MY+KCG++D A
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASR 530
Query: 339 VFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGL 398
VF+ +++R+V W++MI GFA +G L+ F++M E VKPN VT+ +L ACSH GL
Sbjct: 531 VFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590
Query: 399 VDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALL 458
V EG FN M + + P ++HY CMVD+L RAGLL +A EFI MP VW L
Sbjct: 591 VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
Query: 459 GACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKK 518
GAC++H N EL + A +LEL+P A + LSNIYA GKW+ +E+R+ M+ L K
Sbjct: 651 GACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVK 710
Query: 519 EPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRS---HLLQLVE 575
E GCS IEV +IHKF G+++HP +IY +LD ++ +K GYVP+ H L+
Sbjct: 711 EGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEEN 770
Query: 576 EEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILL 635
+E +E+ L HSE++A+A+GLIS S+P+R+ KNLRVCGDCH K IS + REI+L
Sbjct: 771 DEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVL 830
Query: 636 RDRYRFHHFRGGNCSCMDYW 655
RD RFHHF+ G CSC DYW
Sbjct: 831 RDLNRFHHFKDGKCSCNDYW 850
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 163/374 (43%), Gaps = 50/374 (13%)
Query: 86 SSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFV 145
+S E A ++FD++ + N+ TW +I P ++ FL +V S + ++FT V
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSV 275
Query: 146 IKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAIC-GDLAMAYC--VFVMIGK 202
A A L +G+ +H I+S DD + SL+ YA C D ++ C VF +
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 203 KDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWP 262
V+SW ++I+G+ M+N
Sbjct: 334 HSVMSWTALITGY-----------------MKNCN-----------------------LA 353
Query: 263 NEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTS 322
EA+++F E+ +V P+ FTF S AC L +G Q+ + K+G+ N + S
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 323 LIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPN 382
+I M+ K ++ A F ++ +++ ++T + G +A L S + E ++ +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 383 AVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEA---V 439
A TF ++L ++ G + +G +Q+ + G+ ++ M + G +D A
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKL-GLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 440 EFIEKMPIVPGASV 453
F+E ++ S+
Sbjct: 533 NFMENRNVISWTSM 546
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 7/226 (3%)
Query: 30 VNNGHQHHPHPVFS-LIKQCKNI---KQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTF 85
+ GH H FS K C N+ + KQ+ Q + GL + A+ + +
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS--MFVKS 421
Query: 86 SSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFV 145
+E A+ F+ + + NL ++NT + + Q+F + L + + FTF +
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL-LSEITERELGVSAFTFASL 480
Query: 146 IKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDV 205
+ A + R G+ IH V+K + + N+LI Y+ CG + A VF + ++V
Sbjct: 481 LSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Query: 206 VSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACA 251
+SW SMI+GF + GF + +E + +M E VKP+EVT VA+LSAC+
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 123/548 (22%), Positives = 228/548 (41%), Gaps = 97/548 (17%)
Query: 43 SLIKQC---KNIKQLKQIHTQMLRTGLFFDPYSASKLFTP-----CALGTFSSLEYAREM 94
SL+K C ++ + K +H +++ FD S L+ G + E E
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIE----FDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 95 FDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQ 154
+ + ++ +W+ ++ Y ++ + + +F++ + PN++ + VI+A +
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCYTAVIRACSNSDF 181
Query: 155 FRVGQAIHGMVIKSS-FEDDLFISNSLIHFYAICGDLAM--AYCVFVMIGKKDVVSWNSM 211
VG+ G ++K+ FE D+ + SLI + + G+ + AY VF + + +VV+W M
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMF-VKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 212 ISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHE 271
I+ +Q GF +AI + +M + + D+ T+ +V SACA+ +L G+
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK----------- 289
Query: 272 LQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKC- 330
Q+H+ + G+ + + SL+DMY KC
Sbjct: 290 -------------------------------QLHSWAIRSGLVDD--VECSLVDMYAKCS 316
Query: 331 --GNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGC--GREALDLFSRM-QEAKVKPNAVT 385
G++D +VF ++ V W+ +I G+ M C EA++LFS M + V+PN T
Sbjct: 317 ADGSVDDCRKVFDRMEDHSVMSWTALITGY-MKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 386 FTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKM 445
F++ AC + G+ Q G+ ++ M ++ +++A E +
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 446 PIVPGASVWGALLGACKIHENVELAEYACSHLLELE--PENHGALVLLSNIYAKTGKWDN 503
S L G C+ + N E A S + E E LLS + N
Sbjct: 435 SEKNLVSYNTFLDGTCR-NLNFEQAFKLLSEITERELGVSAFTFASLLSGVA-------N 486
Query: 504 VSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCK---EIYSKLDEIVARLKS 560
V +RK ++ + G S + P+C +YSK I +
Sbjct: 487 VGSIRKGEQIHSQVVKLGLS---------------CNQPVCNALISMYSKCGSIDTASRV 531
Query: 561 FGYVPNRS 568
F ++ NR+
Sbjct: 532 FNFMENRN 539
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 153/356 (42%), Gaps = 56/356 (15%)
Query: 138 NEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVF 197
+ TF ++K+ R FR+G+ +H +I+ E D + NSLI Y+ GD A A VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 198 VMI---GKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKR 254
+ GK+DVVSW++M++ + G AI+++ E
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF----------------------- 157
Query: 255 DLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIG-VQIHAKMKKQGI 313
LE G PN ++ + +V+ AC+ + +G V + MK
Sbjct: 158 -LELGLVPN------------------DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 314 KLNCYLTTSLIDMYTKCGN-LDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFS 372
+ + + SLIDM+ K N + A +VF + +V W+ MI G REA+ F
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258
Query: 373 RMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRA 432
M + + + T ++V AC+ + G+ + G+V V+ +VDM +
Sbjct: 259 DMVLSGFESDKFTLSSVFSACAELENLSLGKQ-LHSWAIRSGLVDDVE--CSLVDMYAKC 315
Query: 433 ---GLLDEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENH 485
G +D+ + ++M S W AL+ +N LA A + E+ + H
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMS-WTALITG--YMKNCNLATEAINLFSEMITQGH 368
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 156/359 (43%), Gaps = 35/359 (9%)
Query: 271 ELQLSKNVNP-DEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTK 329
+L + P D TF S+L +C + +G +HA++ + I+ + L SLI +Y+K
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK 109
Query: 330 CGNLDKALEVFHTVK---SRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTF 386
G+ KA +VF T++ RDV WS M+A + G +A+ +F E + PN +
Sbjct: 110 SGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCY 169
Query: 387 TNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRA-GLLDEAVEFIEKM 445
T V+ ACS+S V GR+ + V ++DM + + A + +KM
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 446 PIVPGASVWGALLGACKIHENVELAEYACSHLLELEPEN-HGALVLLSNIYAKTGKWDNV 504
+ W ++ C + A L++ LS++++ + +N+
Sbjct: 230 SEL-NVVTWTLMITRCM---QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENL 285
Query: 505 S---ELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKL-DEIVARLKS 560
S +L SGL + CS +++ + + + S C++++ ++ D V +
Sbjct: 286 SLGKQLHSWAIRSGLVDDVECSLVDMYAKC----SADGSVDDCRKVFDRMEDHSVMSWTA 341
Query: 561 F--GYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGD 617
GY+ N ++ +A+NL SE + + VEP+ + CG+
Sbjct: 342 LITGYMKNC----------NLATEAINLFSEMITQGH----VEPNH-FTFSSAFKACGN 385
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/580 (38%), Positives = 336/580 (57%), Gaps = 48/580 (8%)
Query: 76 LFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPY 135
+++ C L+ A+ +F ++ ++ ++ ++I Y+ ++ +F ++
Sbjct: 340 MYSKCG-----DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM-EEEGI 393
Query: 136 FPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYC 195
P+ +T V+ AR G+ +H + ++ D+F+SN+L+ YA CG + A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 196 VFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRD 255
VF + KD++SWN++I G+ + +
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCY----------------------------------- 478
Query: 256 LEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKL 315
NEALS+F+ L K +PDE T VL ACA L A D G +IH + + G
Sbjct: 479 ------ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 316 NCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQ 375
+ ++ SL+DMY KCG L A +F + S+D+ W+ MIAG+ M+G G+EA+ LF++M+
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 376 EAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLL 435
+A ++ + ++F ++L ACSHSGLVDEG FFN M + P V+HY C+VDML R G L
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 436 DEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIY 495
+A FIE MPI P A++WGALL C+IH +V+LAE + ELEPEN G VL++NIY
Sbjct: 653 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 712
Query: 496 AKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIV 555
A+ KW+ V LRK + GL+K PGCS IE+ G ++ F+AG+SS+P + I + L ++
Sbjct: 713 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVR 772
Query: 556 ARLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVC 615
AR+ GY P + L EE + +E+AL HSE+LA+A G+IS + IR+ KNLRVC
Sbjct: 773 ARMIEEGYSPLTKYALIDAEEME-KEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVC 831
Query: 616 GDCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
GDCH +AK +SKL REI+LRD RFH F+ G+CSC +W
Sbjct: 832 GDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 195/440 (44%), Gaps = 58/440 (13%)
Query: 28 LTVNNGHQHHPHPVFSLIKQC---KNIKQLKQIHTQMLRTGLFFDPYSASKL---FTPCA 81
L V+ P + S+++ C K++K K++ + G D SKL +T C
Sbjct: 84 LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCG 143
Query: 82 LGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFT 141
L+ A +FD++ WN L+ + S + S +F +++ +S + +T
Sbjct: 144 -----DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM-SSGVEMDSYT 197
Query: 142 FPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIG 201
F V K+ + L G+ +HG ++KS F + + NSL+ FY + A VF +
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 202 KKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRW 261
++DV+SWNS+I+G+V G EK + ++ +M
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQM------------------------------ 287
Query: 262 PNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTT 321
L + D T VSV + CA + +G +H+ K
Sbjct: 288 ------------LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 322 SLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKP 381
+L+DMY+KCG+LD A VF + R V +++MIAG+A G EA+ LF M+E + P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 382 NAVTFTNVLCACSHSGLVDEGRMFFNQM-EPVYGVVPGVKHYTCMVDMLGRAGLLDEAVE 440
+ T T VL C+ L+DEG+ + E G V + ++DM + G + EA
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAEL 453
Query: 441 FIEKMPIVPGASVWGALLGA 460
+M + S W ++G
Sbjct: 454 VFSEMRVKDIIS-WNTIIGG 472
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 188/389 (48%), Gaps = 61/389 (15%)
Query: 55 KQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYS 114
+Q+H +L++G F + S L ++ AR++FD++ + ++ +WN++I Y
Sbjct: 215 EQLHGFILKSG-FGERNSVGNSLVAFYLKN-QRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 115 SSAEPIQSFMIFLQLVYNSPYFP-NEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDD 173
S+ + +F+Q++ + F A +RL+ +G+A+H + +K+ F +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS--LGRAVHSIGVKACFSRE 330
Query: 174 LFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEM 233
N+L+ Y+ CGDL A VF + + VVS+ SMI+G+ + G
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL------------- 377
Query: 234 ENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACA 293
EA+ +F E++ + ++PD +T +VL+ CA
Sbjct: 378 ----------------------------AGEAVKLFEEME-EEGISPDVYTVTAVLNCCA 408
Query: 294 QLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWST 353
+ +D G ++H +K+ + + +++ +L+DMY KCG++ +A VF ++ +D+ W+T
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 354 MIAGFAMYGCGREALDLFS-RMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPV 412
+I G++ EAL LF+ ++E + P+ T VL AC+ D+GR +
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR-------EI 521
Query: 413 YGVVPGVKHYT------CMVDMLGRAGLL 435
+G + +++ +VDM + G L
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 120/219 (54%), Gaps = 11/219 (5%)
Query: 39 HPVFSLIKQCKNIKQL---KQIHTQMLRTGLFFDPYSASKL---FTPCALGTFSSLEYAR 92
+ V +++ C + L K++H + L FD + ++ L + C S++ A
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG-----SMQEAE 452
Query: 93 EMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARL 152
+F ++ ++ +WNT+I YS + ++ +F L+ + P+E T V+ A A L
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 153 VQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMI 212
F G+ IHG ++++ + D ++NSL+ YA CG L +A+ +F I KD+VSW MI
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 213 SGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACA 251
+G+ GF ++AI L+ +M ++ DE++ V++L AC+
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/616 (36%), Positives = 338/616 (54%), Gaps = 43/616 (6%)
Query: 41 VFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQI-P 99
+ +++ C ++K+L++IH+ ++ GL P + L CA+ SL +A+ +FD
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 100 QPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQ 159
P+ WN LIR +S+S+ P+ S + + +++ +S P+ FTF F +K+ R+
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 160 AIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGG 219
IHG VI+S F DD ++ SL+ Y+ G + +A VF + +D+VSWN MI F G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 220 FFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVN 279
+A+ +Y+ R NE V
Sbjct: 188 LHNQALSMYK------------------------------RMGNEG------------VC 205
Query: 280 PDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEV 339
D +T V++LS+CA + A+++GV +H + +++ +LIDMY KCG+L+ A+ V
Sbjct: 206 GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGV 265
Query: 340 FHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLV 399
F+ ++ RDV W++MI G+ ++G G EA+ F +M + V+PNA+TF +L CSH GLV
Sbjct: 266 FNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLV 325
Query: 400 DEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLG 459
EG F M + + P VKHY CMVD+ GRAG L+ ++E I +W LLG
Sbjct: 326 KEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
Query: 460 ACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKE 519
+CKIH N+EL E A L++LE N G VL+++IY+ + +RK +R L+
Sbjct: 386 SCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTV 445
Query: 520 PGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDV 579
PG S IE+ ++HKF+ + HP IYS+L E++ R GY P S+ +
Sbjct: 446 PGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRC 505
Query: 580 QEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRY 639
A HSE+LAIAYGL+ +RI KNLRVC DCH+ K +SK +NREI++RDR
Sbjct: 506 LGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRV 565
Query: 640 RFHHFRGGNCSCMDYW 655
RFHHF G CSC DYW
Sbjct: 566 RFHHFADGICSCNDYW 581
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/579 (37%), Positives = 349/579 (60%), Gaps = 24/579 (4%)
Query: 80 CALGTF---SSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYF 136
C LG F + AR+ FD + ++ +WNT+I Y+ S + ++ +F + SP
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SP-V 278
Query: 137 PNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCV 196
+ FT+ ++ +Q R+ + + K +++ N+++ Y + MA +
Sbjct: 279 QDVFTWTAMVSG---YIQNRMVEEARELFDKMPERNEVSW-NAMLAGYVQGERMEMAKEL 334
Query: 197 FVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDL 256
F ++ ++V +WN+MI+G+ Q G +A L+ +M K D V+ A+++ ++
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGH- 389
Query: 257 EFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLN 316
EAL +F +++ + + +F S LS CA + A+++G Q+H ++ K G +
Sbjct: 390 -----SFEALRLFVQME-REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 317 CYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQE 376
C++ +L+ MY KCG++++A ++F + +D+ W+TMIAG++ +G G AL F M+
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 377 AKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLD 436
+KP+ T VL ACSH+GLVD+GR +F M YGV+P +HY CMVD+LGRAGLL+
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
Query: 437 EAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYA 496
+A ++ MP P A++WG LLGA ++H N ELAE A + +EPEN G VLLSN+YA
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623
Query: 497 KTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVA 556
+G+W +V +LR MR G+KK PG S IE+ + H F G+ HP EI++ L+E+
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDL 683
Query: 557 RLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCG 616
R+K GYV S +L VEEE+ +E+ + HSERLA+AYG++ V +PIR++KNLRVC
Sbjct: 684 RMKKAGYVSKTSVVLHDVEEEE-KERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCE 742
Query: 617 DCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
DCH K ++++ R I+LRD RFHHF+ G+CSC DYW
Sbjct: 743 DCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 158/362 (43%), Gaps = 44/362 (12%)
Query: 102 NLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAI 161
++ WN I +Y + ++ +F ++ P + + ++ +I R +F + + +
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSS-VSYNGMISGYLRNGEFELARKL 117
Query: 162 HGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFF 221
E DL N +I Y +L A +F ++ ++DV SWN+M+SG+ Q G
Sbjct: 118 ----FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 222 EKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPD 281
+ A ++ M +N +V+ A+LSA + +E EA +F +
Sbjct: 174 DDARSVFDRMPEKN----DVSWNALLSAYVQNSKME------EACMLFKSRE-------- 215
Query: 282 EFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLT-TSLIDMYTKCGNLDKALEVF 340
+ V C G + + A+ + + ++ ++I Y + G +D+A ++F
Sbjct: 216 --NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF 273
Query: 341 HTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVD 400
+DVF W+ M++G+ EA +LF +M E N V++ +L +G V
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE----RNEVSWNAML-----AGYVQ 324
Query: 401 EGRMFFNQMEPVYGVVP--GVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALL 458
RM + ++ V+P V + M+ + G + EA +KMP S W A++
Sbjct: 325 GERM--EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMI 381
Query: 459 GA 460
Sbjct: 382 AG 383
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 146/332 (43%), Gaps = 36/332 (10%)
Query: 171 EDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYRE 230
+ D+ N I Y G A VF + + VS+N MISG+++ G FE A +L+ E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 231 MEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLS 290
M + D V+ ++ + R+L R E I E D ++ ++LS
Sbjct: 121 MP----ERDLVSWNVMIKGYVRNRNLGKAR---ELFEIMPE--------RDVCSWNTMLS 165
Query: 291 ACAQLGAMDIGVQIHAKM-KKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVF 349
AQ G +D + +M +K + N +L+ Y + +++A +F + ++ +
Sbjct: 166 GYAQNGCVDDARSVFDRMPEKNDVSWN-----ALLSAYVQNSKMEEACMLFKSRENWALV 220
Query: 350 VWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQM 409
W+ ++ GF EA F M V V++ ++ + SG +DE R F++
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFDE- 275
Query: 410 EPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIHENVEL 469
PV V +T MV + +++EA E +KMP S W A+L E +E+
Sbjct: 276 SPVQDVFT----WTAMVSGYIQNRMVEEARELFDKMPERNEVS-WNAMLAGYVQGERMEM 330
Query: 470 AEYACSHLLELEP-ENHGALVLLSNIYAKTGK 500
A+ L ++ P N + YA+ GK
Sbjct: 331 AK----ELFDVMPCRNVSTWNTMITGYAQCGK 358
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/568 (37%), Positives = 323/568 (56%), Gaps = 44/568 (7%)
Query: 88 LEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIK 147
++ R +F+ +P+ ++ ++NT+I Y+ S + + ++ + + P+ FT V+
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSG-MYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 148 AAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVS 207
+ V G+ IHG VI+ + D++I +SL+ YA + + VF + +D +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 208 WNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALS 267
WNS+++G+VQ G + NEAL
Sbjct: 311 WNSLVAGYVQNGRY-----------------------------------------NEALR 329
Query: 268 IFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMY 327
+F ++ +K V P F SV+ ACA L + +G Q+H + + G N ++ ++L+DMY
Sbjct: 330 LFRQMVTAK-VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMY 388
Query: 328 TKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFT 387
+KCGN+ A ++F + D W+ +I G A++G G EA+ LF M+ VKPN V F
Sbjct: 389 SKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFV 448
Query: 388 NVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPI 447
VL ACSH GLVDE +FN M VYG+ ++HY + D+LGRAG L+EA FI KM +
Sbjct: 449 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCV 508
Query: 448 VPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSEL 507
P SVW LL +C +H+N+ELAE + ++ EN GA VL+ N+YA G+W +++L
Sbjct: 509 EPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKL 568
Query: 508 RKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNR 567
R MR GL+K+P CS IE+ + H F++G+ SHP +I L ++ +++ GYV +
Sbjct: 569 RLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADT 628
Query: 568 SHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISK 627
S +L V+EE +E HSERLA+A+G+I+ EP IR+ KN+R+C DCH K ISK
Sbjct: 629 SGVLHDVDEEHKRELLFG-HSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISK 687
Query: 628 LYNREILLRDRYRFHHFRGGNCSCMDYW 655
+ REI++RD RFHHF GNCSC DYW
Sbjct: 688 ITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 212/464 (45%), Gaps = 93/464 (20%)
Query: 43 SLIKQCKNIK---QLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREM---FD 96
+LIK IK Q KQ+H Q +RT S S + +++L+ E F
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRT------QSLSHTSASIVISIYTNLKLLHEALLLFK 63
Query: 97 QIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFR 156
+ P + W ++IR ++ + ++ F+++ S P+ FP V+K+ ++ R
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEM-RASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 157 VGQAIHGMVIKSSFEDDLFISNSLIHFYA-ICG------------------------DLA 191
G+++HG +++ + DL+ N+L++ YA + G D+
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 192 MAYC-----------VFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDE 240
C VF ++ +KDVVS+N++I+G+ Q G +E A+ + REM ++KPD
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 241 VTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDI 300
T+ +V L IF E +V V+
Sbjct: 243 FTLSSV-------------------LPIFSE-------------YVDVIK---------- 260
Query: 301 GVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAM 360
G +IH + ++GI + Y+ +SL+DMY K ++ + VF + RD W++++AG+
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 361 YGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVK 420
G EAL LF +M AKVKP AV F++V+ AC+H + G+ + G +
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR-GGFGSNIF 379
Query: 421 HYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIH 464
+ +VDM + G + A + ++M ++ S W A++ +H
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALH 422
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 167/344 (48%), Gaps = 18/344 (5%)
Query: 40 PVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIP 99
P+FS + ++ + K+IH ++R G+ D Y S L A + +E + +F ++
Sbjct: 250 PIFS---EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS--ARIEDSERVFSRLY 304
Query: 100 QPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQ 159
+ +WN+L+ Y + ++ +F Q+V + P F VI A A L +G+
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 160 AIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGG 219
+HG V++ F ++FI+++L+ Y+ CG++ A +F + D VSW ++I G G
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 220 FFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVN 279
+A+ L+ EM+ + VKP++V VAVL+AC+ ++ EA F+ + +N
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD------EAWGYFNSMTKVYGLN 477
Query: 280 PDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNL---DKA 336
+ + +V + G ++ +KM ++ + ++L+ + NL +K
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKM---CVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Query: 337 LEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVK 380
E TV S ++ + M +A G +E L RM++ ++
Sbjct: 535 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/674 (35%), Positives = 370/674 (54%), Gaps = 73/674 (10%)
Query: 44 LIKQCKNIKQL---KQIHTQMLRTGLFFDPYSASKLFT---PCALGTFSSLEYAREMFDQ 97
+++ C I L K++H ++R G D + L T C ++ AR +FD+
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG-----DVKSARLLFDR 256
Query: 98 IPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRV 157
+P+ ++ +WN +I Y + + +F + P+ T VI A L R+
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAM-RGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 158 GQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQ 217
G+ IH VI + F D+ + NSL Y G A +F + +KD+VSW +MISG+
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 218 GGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFG------------------ 259
+KAI+ YR M+ ++VKPDE+T+ AVLSACA DL+ G
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 260 -----------RWPNEALSIFHEL-----------------------------QLSKNVN 279
+ ++AL IFH + Q+ +
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQ 495
Query: 280 PDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEV 339
P+ T + L+ACA++GA+ G +IHA + + G+ L+ +L +L+DMY +CG ++ A
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 340 FHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLV 399
F++ K +DV W+ ++ G++ G G ++LF RM +++V+P+ +TF ++LC CS S +V
Sbjct: 556 FNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 400 DEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLG 459
+G M+F++ME YGV P +KHY C+VD+LGRAG L EA +FI+KMP+ P +VWGALL
Sbjct: 615 RQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 460 ACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKE 519
AC+IH ++L E + H+ EL+ ++ G +LL N+YA GKW V+++R+ M+ +GL +
Sbjct: 674 ACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Query: 520 PGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDV 579
GCS +EV G++H FL+ + HP KEI + L+ ++ G + S + E E
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG-LTKISESSSMDETEIS 792
Query: 580 QEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRY 639
+++ HSER AIA+GLI+ P PI + KNL +C +CH K ISK REI +RD
Sbjct: 793 RDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAE 852
Query: 640 RFHHFRGGNCSCMD 653
FHHF+ G CSC D
Sbjct: 853 HFHHFKDGECSCGD 866
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 172/358 (48%), Gaps = 62/358 (17%)
Query: 85 FSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPF 144
F +L A +F ++ + NL++WN L+ Y+ ++ ++ ++++ P+ +TFP
Sbjct: 142 FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201
Query: 145 VIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKD 204
V++ + G+ +H V++ +E D+ + N+LI Y CGD+ A +F + ++D
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 205 VVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGR---- 260
++SWN+MISG+ + G + +EL+ M +V PD +T+ +V+SAC D GR
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 261 --------------------------WPNEALSIFHELQLSK-------------NVNPD 281
W EA +F ++ N PD
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSW-REAEKLFSRMERKDIVSWTTMISGYEYNFLPD 380
Query: 282 -----------------EFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLI 324
E T +VLSACA LG +D GV++H K + + +LI
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 325 DMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPN 382
+MY+KC +DKAL++FH + ++V W+++IAG + EAL +F R + ++PN
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPN 497
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 47/264 (17%)
Query: 145 VIKAAARLVQFRV----GQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMI 200
V A RL +++ G ++ + + S + + N+ + + G+L A+ VF +
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 201 GKKDVVSWNSMISGFVQGGFFEKAIELY-REMEMENVKPDEVTMVAVLSACAKKRDLEFG 259
++++ SWN ++ G+ + G+F++A+ LY R + + VKPD T VL C DL G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 260 RWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYL 319
+ ++H + + G +L+ +
Sbjct: 216 K------------------------------------------EVHVHVVRYGYELDIDV 233
Query: 320 TTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKV 379
+LI MY KCG++ A +F + RD+ W+ MI+G+ G E L+LF M+ V
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV 293
Query: 380 KPNAVTFTNVLCACSHSGLVDEGR 403
P+ +T T+V+ AC G GR
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGR 317
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 264 EALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSL 323
EA+ + + +Q V DE FV+++ C A + G ++++ L L +
Sbjct: 77 EAMKLLNSMQ-ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 324 IDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRM-QEAKVKPN 382
+ M+ + GNL A VF + R++F W+ ++ G+A G EA+ L+ RM VKP+
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 383 AVTFTNVLCACSHSGLVDEGRMFFNQMEPV-YGVVPGVKHYTCMVDMLGRAGLLDEAVEF 441
TF VL C G+ D R + V YG + ++ M + G + A
Sbjct: 196 VYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 442 IEKMPIVPGASVWGALL------GACKIHENVEL 469
++MP S W A++ G C HE +EL
Sbjct: 254 FDRMPRRDIIS-WNAMISGYFENGMC--HEGLEL 284
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/621 (36%), Positives = 354/621 (57%), Gaps = 53/621 (8%)
Query: 40 PVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEY---AREMFD 96
+ + +K C +I+ + +H +++++ + + +L +G + L + A ++FD
Sbjct: 36 SLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQL-----VGCYLRLGHDVCAEKLFD 90
Query: 97 QIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYF-PNEFTFPFVIKAAARLVQF 155
++P+ +L +WN+LI YS + F + +++ + F PNE TF +I A
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 156 RVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGF 215
G+ IHG+V+K +++ + N+ I++Y GDL + +F + K++VSWN+MI
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 216 VQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLS 275
+Q G EK + + N + + HE
Sbjct: 211 LQNGLAEKGLAYF----------------------------------NMSRRVGHE---- 232
Query: 276 KNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDK 335
PD+ TF++VL +C +G + + IH + G N +TT+L+D+Y+K G L+
Sbjct: 233 ----PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLED 288
Query: 336 ALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSH 395
+ VFH + S D W+ M+A +A +G GR+A+ F M + P+ VTFT++L ACSH
Sbjct: 289 SSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSH 348
Query: 396 SGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWG 455
SGLV+EG+ +F M Y + P + HY+CMVD+LGR+GLL +A I++MP+ P + VWG
Sbjct: 349 SGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWG 408
Query: 456 ALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSG 515
ALLGAC+++++ +L A L ELEP + V+LSNIY+ +G W + S +R M+ G
Sbjct: 409 ALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKG 468
Query: 516 LKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKS-FGYVPNRSHLLQLV 574
L + GCS IE +IHKF+ G+ SHP ++I KL EI ++KS GY +L V
Sbjct: 469 LVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDV 528
Query: 575 EEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREIL 634
EDV+E+ +N HSE++A+A+GL+ V P +PI I KNLR+CGDCH AK IS + R I+
Sbjct: 529 -GEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRII 587
Query: 635 LRDRYRFHHFRGGNCSCMDYW 655
+RD RFHHF G+CSC DYW
Sbjct: 588 IRDSKRFHHFLDGSCSCSDYW 608
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 245 AVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQI 304
A + +C+K R L R+ +++ S H L NV+ + ++ + +C ++++ +
Sbjct: 4 ANVYSCSKFRFLYRRRFLSQS-SFVHSLD--ANVS----SLIAAVKSCV---SIELCRLL 53
Query: 305 HAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCG 364
H K+ K + ++ L+ Y + G+ A ++F + RD+ W+++I+G++ G
Sbjct: 54 HCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYL 113
Query: 365 REALDLFSRM--QEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHY 422
+ ++ SRM E +PN VTF +++ AC + G +EGR + +GV+ VK
Sbjct: 114 GKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK-FGVLEEVKVV 172
Query: 423 TCMVDMLGRAGLLDEAVEFIEKMPI 447
++ G+ G L + + E + I
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSI 197
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/571 (37%), Positives = 339/571 (59%), Gaps = 15/571 (2%)
Query: 88 LEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIK 147
++ A F+Q+ + ++ TWN++I ++ +++ IF +++ +S P+ FT V+
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 148 AAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKD--V 205
A A L + +G+ IH ++ + F+ + N+LI Y+ CG + A + G KD +
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 206 VSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEA 265
+ +++ G+++ G +A ++ ++ +V V A++ ++ +G EA
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDV----VAWTAMI--VGYEQHGSYG----EA 397
Query: 266 LSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLID 325
+++F + + P+ +T ++LS + L ++ G QIH K G + ++ +LI
Sbjct: 398 INLFRSM-VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALIT 456
Query: 326 MYTKCGNLDKALEVFHTVK-SRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAV 384
MY K GN+ A F ++ RD W++MI A +G EAL+LF M ++P+ +
Sbjct: 457 MYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 385 TFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEK 444
T+ V AC+H+GLV++GR +F+ M+ V ++P + HY CMVD+ GRAGLL EA EFIEK
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEK 576
Query: 445 MPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNV 504
MPI P WG+LL AC++H+N++L + A LL LEPEN GA L+N+Y+ GKW+
Sbjct: 577 MPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEA 636
Query: 505 SELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYV 564
+++RK M+ +KKE G S IEV ++H F + +HP EIY + +I +K GYV
Sbjct: 637 AKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYV 696
Query: 565 PNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKL 624
P+ + +L +EEE V+EQ L HSE+LAIA+GLIS +RI+KNLRVC DCHT K
Sbjct: 697 PDTASVLHDLEEE-VKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKF 755
Query: 625 ISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
ISKL REI++RD RFHHF+ G CSC DYW
Sbjct: 756 ISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 219/510 (42%), Gaps = 93/510 (18%)
Query: 38 PHPVFSLIKQCKNIKQ-----------LKQIHTQMLRTGLFFDPYSASKLFTPCALGTFS 86
P + +L++ C N+ Q + +H +++++GL F Y + L + +S
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNL-----MNVYS 60
Query: 87 SLEYA---REMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQL-------------- 129
YA R++FD++P ++WNT++ AYS + + F QL
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 130 ----------------VYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDD 173
+ P +FT V+ + A G+ +H ++K +
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 174 LFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEM 233
+ +SNSL++ YA CGD MA VF + +D+ SWN+MI+ +Q G + A+ + +M
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM-- 238
Query: 234 ENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACA 293
+ D VT +++S ++ + AL IF ++ ++PD FT SVLSACA
Sbjct: 239 --AERDIVTWNSMISGFNQR------GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 294 QLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKC----------------------- 330
L + IG QIH+ + G ++ + +LI MY++C
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 331 ----------GNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVK 380
G++++A +F ++K RDV W+ MI G+ +G EA++LF M +
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 381 PNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVE 440
PN+ T +L S + G+ G + V ++ M +AG + A
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVK-SGEIYSVSVSNALITMYAKAGNITSASR 469
Query: 441 FIEKMPIVPGASVWGALLGACKIHENVELA 470
+ + W +++ A H + E A
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/639 (35%), Positives = 359/639 (56%), Gaps = 49/639 (7%)
Query: 52 KQLKQIHTQMLRTGLFFDPYSASKL---FTPCALGTFSSLEYAREMFDQIPQPNLYTWNT 108
KQ Q H L++G + ++ L ++ CA + S L AR++FD+I + + +W T
Sbjct: 166 KQCVQFHAAALKSGAGYITSVSNALVSVYSKCA-SSPSLLHSARKVFDEILEKDERSWTT 224
Query: 109 LIRAYSSSA------EPIQSFMIFLQLV-YN---SPYFP--------------------- 137
++ Y + E ++ ++LV YN S Y
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 138 NEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLF-ISNSLIHFYAICGDLAMAYCV 196
+EFT+P VI+A A ++G+ +H V++ ED F NSL+ Y CG A +
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFSFHFDNSLVSLYYKCGKFDEARAI 342
Query: 197 FVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDL 256
F + KD+VSWN+++SG+V G +A +++EM+ +N+ ++ + ++S A+
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAEN--- 395
Query: 257 EFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLN 316
FG E L +F ++ + P ++ F + +CA LGA G Q HA++ K G +
Sbjct: 396 GFG---EEGLKLFSCMK-REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 317 CYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQE 376
+LI MY KCG +++A +VF T+ D W+ +IA +G G EA+D++ M +
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 377 AKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLD 436
++P+ +T VL ACSH+GLVD+GR +F+ ME VY + PG HY ++D+L R+G
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 437 EAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYA 496
+A IE +P P A +W ALL C++H N+EL A L L PE+ G +LLSN++A
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHA 631
Query: 497 KTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVA 556
TG+W+ V+ +RK MR G+KKE CS IE+ ++H FL ++SHP + +Y L ++
Sbjct: 632 ATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGK 691
Query: 557 RLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCG 616
++ GYVP+ S +L VE + +E L HSE++A+A+GL+ + P IRI KNLR CG
Sbjct: 692 EMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCG 751
Query: 617 DCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCMDYW 655
DCH + +S + R+I+LRDR RFHHFR G CSC ++W
Sbjct: 752 DCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 42/254 (16%)
Query: 43 SLIKQCKNIKQL---KQIHTQMLRTGLF---FDPYSASKLFTPCALGTFSSLEYAREMFD 96
S+I+ C L KQ+H +LR F FD S L+ C G F AR +F+
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN-SLVSLYYKC--GKFDE---ARAIFE 344
Query: 97 QIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQL--------------------------- 129
++P +L +WN L+ Y SS ++ +IF ++
Sbjct: 345 KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 130 ---VYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAI 186
+ + P ++ F IK+ A L + GQ H ++K F+ L N+LI YA
Sbjct: 405 FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464
Query: 187 CGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAV 246
CG + A VF + D VSWN++I+ Q G +A+++Y EM + ++PD +T++ V
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 247 LSACAKKRDLEFGR 260
L+AC+ ++ GR
Sbjct: 525 LTACSHAGLVDQGR 538
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 134/301 (44%), Gaps = 32/301 (10%)
Query: 171 EDDLFISNSLIHFYAICGDLAMAYCVF--VMIGKKDVVSWNSMISGFVQGGFFEKAIELY 228
E D +++ Y GD+ +A VF + +D V +N+MI+GF AI L+
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 229 REMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKN---VNPDEFTF 285
+M+ E KPD T +VL+ A D E + FH L +
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDE------KQCVQFHAAALKSGAGYITSVSNAL 190
Query: 286 VSVLSACAQLGAMDIGVQIHAKMK--KQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTV 343
VSV S CA ++ +H+ K + ++ + T+++ Y K G D E+ +
Sbjct: 191 VSVYSKCASSPSL-----LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 344 KSR-DVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEG 402
+ ++ MI+G+ G +EAL++ RM + ++ + T+ +V+ AC+ +GL+ G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 403 RMFFNQMEPVYGVVPGVKHYT-----CMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGAL 457
+ V+ V + ++ +V + + G DEA EKMP S W AL
Sbjct: 306 KQ-------VHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVS-WNAL 357
Query: 458 L 458
L
Sbjct: 358 L 358
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 33/129 (25%)
Query: 297 AMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKS----------- 345
++ + +H + G + ++ LID+Y K L+ A ++F +
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 346 ----------------------RDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNA 383
RD +++ MI GF+ G A++LF +M+ KP+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 384 VTFTNVLCA 392
TF +VL
Sbjct: 149 FTFASVLAG 157
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 352/620 (56%), Gaps = 21/620 (3%)
Query: 41 VFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIP- 99
+F + +C + +++ +M D + S L CA LE + ++
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALL--CAYARKGCLEEVVRILSEMES 210
Query: 100 ---QPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFR 156
+ N+ +WN ++ ++ S ++ ++F Q +++ + P++ T V+ +
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMF-QKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 157 VGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFV 216
+G+ IHG VIK D + +++I Y G + +F + N+ I+G
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 217 QGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKK-RDLEFGRWPNEALSIFHELQLS 275
+ G +KA+E++ + + ++ + V+ ++++ CA+ +D+E AL +F E+Q++
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE-------ALELFREMQVA 382
Query: 276 KNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDK 335
V P+ T S+L AC + A+ G H + + N ++ ++LIDMY KCG ++
Sbjct: 383 -GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 336 ALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSH 395
+ VF+ + ++++ W++++ GF+M+G +E + +F + ++KP+ ++FT++L AC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 396 SGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWG 455
GL DEG +F M YG+ P ++HY+CMV++LGRAG L EA + I++MP P + VWG
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWG 561
Query: 456 ALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSG 515
ALL +C++ NV+LAE A L LEPEN G VLLSNIYA G W V +R M G
Sbjct: 562 ALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 516 LKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVE 575
LKK PGCS I+V ++ LAG+ SHP +I K+DEI ++ G+ PN L VE
Sbjct: 622 LKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVE 681
Query: 576 EEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILL 635
E++ QEQ L HSE+LA+ +GL++ P++++KNLR+CGDCH V K IS REI +
Sbjct: 682 EQE-QEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFI 740
Query: 636 RDRYRFHHFRGGNCSCMDYW 655
RD RFHHF+ G CSC D+W
Sbjct: 741 RDTNRFHHFKDGICSCGDFW 760
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 208/446 (46%), Gaps = 51/446 (11%)
Query: 56 QIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSS 115
Q H ++L++G D Y ++KL + ++ A + IP P +Y++++LI A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIA--SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 116 SAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLF 175
+ QS +F ++ ++ P+ P + K A L F+VG+ IH + S + D F
Sbjct: 94 AKLFTQSIGVFSRM-FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 176 ISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMEN 235
+ S+ H Y CG + A VF + KDVV+ ++++ + + G E+ + + EME
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 236 VKPDEVTMVAVLSACAKKRDLEFGR--WPNEALSIFHELQLSKNVNPDEFTFVSVLSACA 293
++ + V+ +LS F R + EA+ +F ++ PD+ T SVL +
Sbjct: 213 IEANIVSWNGILSG--------FNRSGYHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVG 263
Query: 294 QLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGN--------------------- 332
+++G IH + KQG+ + + +++IDMY K G+
Sbjct: 264 DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 333 ----------LDKALEVFHTVKSR----DVFVWSTMIAGFAMYGCGREALDLFSRMQEAK 378
+DKALE+F K + +V W+++IAG A G EAL+LF MQ A
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 379 VKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEA 438
VKPN VT ++L AC + + GR V+ ++ V + ++DM + G ++ +
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLS 442
Query: 439 VEFIEKMPIVPGASVWGALLGACKIH 464
MP W +L+ +H
Sbjct: 443 QIVFNMMP-TKNLVCWNSLMNGFSMH 467
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/627 (35%), Positives = 361/627 (57%), Gaps = 30/627 (4%)
Query: 44 LIKQCKN---IKQLKQIHTQMLRTGLFFDP--YSASKLFTPCALGTFSSLEYAREMFDQI 98
L++ C + ++ K++H + +GL P Y ++ LF A + + A+++FD+I
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYA--SSGEMVTAQKLFDEI 69
Query: 99 P--QPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFR 156
P + + W TL+ ++S + S +F+++ ++ + + A+L
Sbjct: 70 PLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEI-DDVSVVCLFGVCAKLEDLG 128
Query: 157 VGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFV 216
Q HG+ +K + + N+L+ Y CG ++ +F + +K VVSW ++ V
Sbjct: 129 FAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVV 188
Query: 217 QGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSK 276
+ E+ E++ EM N V + L A + E L + E+
Sbjct: 189 KWEGLERGREVFHEMPERNAVAWTVMVAGYLGA----------GFTREVLELLAEMVFRC 238
Query: 277 NVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKL-------NCYLTTSLIDMYTK 329
+ T S+LSACAQ G + +G +H K+ + + + + T+L+DMY K
Sbjct: 239 GHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAK 298
Query: 330 CGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNV 389
CGN+D ++ VF ++ R+V W+ + +G AM+G GR +D+F +M +VKP+ +TFT V
Sbjct: 299 CGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAV 357
Query: 390 LCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVP 449
L ACSHSG+VDEG F+ + YG+ P V HY CMVD+LGRAGL++EA + +MP+ P
Sbjct: 358 LSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPP 416
Query: 450 GASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRK 509
V G+LLG+C +H VE+AE L+++ P N +L+SN+Y G+ D LR
Sbjct: 417 NEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRG 476
Query: 510 HMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSH 569
+R G++K PG SSI VN +H+F +G+ SHP KEIY KL+E++ R++S GYVP+ S
Sbjct: 477 SLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSG 536
Query: 570 LLQLVEEE-DVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKL 628
L+ E + + +EQAL HSE+LA+ +GL+ +PS P+ + KNLR+C DCH+ K++SK+
Sbjct: 537 LVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKV 596
Query: 629 YNREILLRDRYRFHHFRGGNCSCMDYW 655
Y+REI++RDR RFH F+GG+CSC DYW
Sbjct: 597 YDREIIIRDRNRFHQFKGGSCSCSDYW 623
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/662 (36%), Positives = 367/662 (55%), Gaps = 70/662 (10%)
Query: 56 QIHTQMLRTGLFFD-PYSAS--KLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRA 112
Q+HT +++ GL P S S L+ C ++ AR +FD+ ++ TWN++I
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCG-----NVRKARILFDKTEVKSVVTWNSMISG 269
Query: 113 YSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFED 172
Y+++ +++ +F + N +E +F VIK A L + R + +H V+K F
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRL-SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 173 DLFISNSLIHFYAICGDLAMAYCVFVMIG-KKDVVSWNSMISGFVQGGFFEKAIELYREM 231
D I +L+ Y+ C + A +F IG +VVSW +MISGF+Q E+A++L+ EM
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 232 EMEN-----------------VKPDEV--------------TMVAVLSACAKK------- 253
+ + + P EV A+L A K
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 254 ------RDLEFGRWP------------NEALSIFHELQLSKNVNPDEFTFVSVLSACAQL 295
D + W A+ +F EL + P+EFTF S+L+ CA
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT-KGGIKPNEFTFSSILNVCAAT 507
Query: 296 GA-MDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTM 354
A M G Q H K + + ++++L+ MY K GN++ A EVF + +D+ W++M
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 355 IAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYG 414
I+G+A +G +ALD+F M++ KVK + VTF V AC+H+GLV+EG +F+ M
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 415 VVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLGACKIHENVELAEYAC 474
+ P +H +CMVD+ RAG L++A++ IE MP G+++W +L AC++H+ EL A
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 687
Query: 475 SHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIHKF 534
++ ++PE+ A VLLSN+YA++G W +++RK M +KKEPG S IEV + + F
Sbjct: 688 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSF 747
Query: 535 LAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLAIA 594
LAG+ SHPL +IY KL+++ RLK GY P+ S++LQ +++E +E L HSERLAIA
Sbjct: 748 LAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEH-KEAVLAQHSERLAIA 806
Query: 595 YGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRFHHFRG-GNCSCMD 653
+GLI+ P+ I+KNLRVCGDCH V KLI+K+ REI++RD RFHHF G CSC D
Sbjct: 807 FGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGD 866
Query: 654 YW 655
+W
Sbjct: 867 FW 868
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 189/412 (45%), Gaps = 68/412 (16%)
Query: 55 KQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYS 114
+Q+H Q ++ G D + L G S+ + R++FD++ + N+ TW TLI Y+
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKG--SNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 115 SSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDL 174
++ + +F+++ N PN FTF + A G +H +V+K+ + +
Sbjct: 171 RNSMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 175 FISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEME 234
+SNSLI+ Y CG++ A +F K VV+WNSMISG+ G +A+ ++ M +
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 235 NVKPDEVTMVAVLSACAKKRDLEFGRWPN-----------------------------EA 265
V+ E + +V+ CA ++L F + +A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 266 LSIFHELQLSKNV-------------------------------NPDEFTFVSVLSACAQ 294
L +F E+ NV P+EFT+ +L+A
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 295 LGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTM 354
+ ++HA++ K + + + T+L+D Y K G +++A +VF + +D+ WS M
Sbjct: 410 ISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 355 IAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGL-VDEGRMF 405
+AG+A G A+ +F + + +KPN TF+++L C+ + + +G+ F
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF 517
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 146/316 (46%), Gaps = 45/316 (14%)
Query: 82 LGTFSS--LEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNE 139
GT SS L A +FD+ P + ++ +L+ +S ++ +FL ++ +
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN-IHRLGMEMDC 93
Query: 140 FTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVM 199
F V+K +A L G+ +H IK F DD+ + SL+ Y + VF
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 200 IGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFG 259
+ +++VV+W ++ISG+ + N DEV
Sbjct: 154 MKERNVVTWTTLISGYAR-----------------NSMNDEV------------------ 178
Query: 260 RWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYL 319
L++F +Q ++ P+ FTF + L A+ G G+Q+H + K G+ +
Sbjct: 179 ------LTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 320 TTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKV 379
+ SLI++Y KCGN+ KA +F + + V W++MI+G+A G EAL +F M+ V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 380 KPNAVTFTNVLCACSH 395
+ + +F +V+ C++
Sbjct: 292 RLSESSFASVIKLCAN 307
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%)
Query: 285 FVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVK 344
F SVL A L G Q+H + K G + + TSL+D Y K N +VF +K
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 345 SRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEG 402
R+V W+T+I+G+A E L LF RMQ +PN+ TF L + G+ G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/687 (34%), Positives = 374/687 (54%), Gaps = 62/687 (9%)
Query: 9 METLSTPVISLPRHPNPTTLTVNNGHQHHPHP--VFSLIKQCKNIKQLKQIHTQMLRTGL 66
M++LS VI P+ +P + Q P SLI CK+ L+ +H Q+LR G+
Sbjct: 1 MKSLS--VIFKPK-SSPAKIYFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRGV 57
Query: 67 FFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAE---PIQSF 123
A++L + +L S +Y+ +F + N + N LIR + +A ++ F
Sbjct: 58 L-SSRVAAQLVSCSSL--LKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHF 114
Query: 124 MIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHF 183
++ L+L P+ TFPFV+K+ ++L +G+A+H +K+ + D F+ SL+
Sbjct: 115 ILMLRLGVK----PDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDM 170
Query: 184 YAICG-----------------------------------DLAMAYCVFVMIGKKDVVSW 208
YA G D+ MA +F + +++ SW
Sbjct: 171 YAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSW 230
Query: 209 NSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSI 268
+++I G+V G +A +L+ M +NV V+ +++ ++ D E A+S
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNV----VSWTTLINGFSQTGDYE------TAIST 280
Query: 269 FHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYT 328
+ E+ L K + P+E+T +VLSAC++ GA+ G++IH + GIKL+ + T+L+DMY
Sbjct: 281 YFEM-LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYA 339
Query: 329 KCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTN 388
KCG LD A VF + +D+ W+ MI G+A++G +A+ F +M + KP+ V F
Sbjct: 340 KCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLA 399
Query: 389 VLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIV 448
VL AC +S VD G FF+ M Y + P +KHY +VD+LGRAG L+EA E +E MPI
Sbjct: 400 VLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPIN 459
Query: 449 PGASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELR 508
P + W AL ACK H+ AE +LLEL+PE G+ + L +A G +V + R
Sbjct: 460 PDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRR 519
Query: 509 KHMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRS 568
++ ++ G S IE++G+++KF AG+ SH L +EI KLDEI++ GY P
Sbjct: 520 LSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGAD 579
Query: 569 HLLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKL 628
+ +EEE+ +E +HSE+LA+ G + P IRI+KNLR+CGDCH++ K +SK+
Sbjct: 580 WSIHDIEEEE-KENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKI 638
Query: 629 YNREILLRDRYRFHHFRGGNCSCMDYW 655
R+ILLRD +FHHF+ G CSC DYW
Sbjct: 639 SQRDILLRDARQFHHFKDGRCSCGDYW 665
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/624 (36%), Positives = 344/624 (55%), Gaps = 69/624 (11%)
Query: 88 LEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIK 147
++ AR++FD +P+ N+ +W L++ Y + + + +F ++ P + + +
Sbjct: 95 IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM-------PEKNKVSWTVM 147
Query: 148 AAARLVQFRVGQA------------------IHGM-----------VIKSSFEDDLFISN 178
L R+ A IHG+ + E +
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWT 207
Query: 179 SLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKP 238
+++ Y + A +F ++ +K VSW SM+ G+VQ G E A EL+ E+ VKP
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF---EVMPVKP 264
Query: 239 DEVTMVAVLSACAKKRDLEFGR-------------WPN------------EALSIFHELQ 273
+ A++S +K ++ R W EAL +F +Q
Sbjct: 265 -VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ 323
Query: 274 LSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNL 333
+ V P T +S+LS CA L ++ G Q+HA++ + ++ Y+ + L+ MY KCG L
Sbjct: 324 -KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 334 DKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQ-EAKVKPNAVTFTNVLCA 392
K+ +F S+D+ +W+++I+G+A +G G EAL +F M KPN VTF L A
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Query: 393 CSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGAS 452
CS++G+V+EG + ME V+GV P HY CMVDMLGRAG +EA+E I+ M + P A+
Sbjct: 443 CSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAA 502
Query: 453 VWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMR 512
VWG+LLGAC+ H +++AE+ L+E+EPEN G +LLSN+YA G+W +V+ELRK M+
Sbjct: 503 VWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMK 562
Query: 513 VSGLKKEPGCSSIEVNGEIHKFL-AGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLL 571
++K PGCS EV ++H F G +SHP + I LDE+ L+ GY P+ S+ L
Sbjct: 563 TRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYAL 622
Query: 572 QLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNR 631
V+EE+ + +L HSERLA+AY L+ + PIR++KNLRVC DCHT K+ISK+ R
Sbjct: 623 HDVDEEE-KVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKER 681
Query: 632 EILLRDRYRFHHFRGGNCSCMDYW 655
EI+LRD RFHHFR G CSC DYW
Sbjct: 682 EIILRDANRFHHFRNGECSCKDYW 705
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 41/299 (13%)
Query: 81 ALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNS--PYFPN 138
LG + AR +FD + + N +W T+I+ + + +++ +F+ + P FP
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFP- 332
Query: 139 EFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFV 198
T ++ A L G+ +H +++ F+ D+++++ L+ Y CG+L + +F
Sbjct: 333 --TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 199 MIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEME-NVKPDEVTMVAVLSACAKKRDLE 257
KD++ WNS+ISG+ G E+A++++ EM + + KP+EVT VA LSAC+ +E
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVE 450
Query: 258 ------------FGRWP------------------NEALSIFHELQLSKNVNPDEFTFVS 287
FG P NEA+ E+ S V PD + S
Sbjct: 451 EGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM----EMIDSMTVEPDAAVWGS 506
Query: 288 VLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSR 346
+L AC +D+ + AK + N L +MY G E+ +K+R
Sbjct: 507 LLGACRTHSQLDVA-EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 28/273 (10%)
Query: 177 SNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENV 236
+N I + G + A +F K + SWNSM++G+ A +L+ EM N+
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 237 KPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLG 296
++ ++S K ++ +EA +F +L +NV ++ +++ G
Sbjct: 80 ----ISWNGLVSGYMKNGEI------DEARKVF-DLMPERNV----VSWTALVKGYVHNG 124
Query: 297 AMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIA 356
+D+ + KM ++ N T ++ + + G +D A +++ + +D ++MI
Sbjct: 125 KVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIH 180
Query: 357 GFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVV 416
G G EA ++F M E V +T+T ++ + VD+ R F+ M V
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV- 235
Query: 417 PGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVP 449
+T M+ + G +++A E E MP+ P
Sbjct: 236 ----SWTSMLMGYVQNGRIEDAEELFEVMPVKP 264
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 123/273 (45%), Gaps = 32/273 (11%)
Query: 193 AYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAK 252
A +F + ++++SWN ++SG+++ G ++A +++ M NV V+ A++
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVH 122
Query: 253 KRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQG 312
++ A S+F ++ V ++ +L Q G +D +++ + +
Sbjct: 123 NGKVDV------AESLFWKMPEKNKV-----SWTVMLIGFLQDGRIDDACKLYEMIPDK- 170
Query: 313 IKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFS 372
+ TS+I K G +D+A E+F + R V W+TM+ G+ +A +F
Sbjct: 171 ---DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD 227
Query: 373 RMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRA 432
M E V++T++L +G +++ F M PV V+ M+ LG+
Sbjct: 228 VMPE----KTEVSWTSMLMGYVQNGRIEDAEELFEVM-PVKPVIA----CNAMISGLGQK 278
Query: 433 GLLDEAVEFIEKMPIVPGASVWGALLGACKIHE 465
G + +A + M AS W ++ KIHE
Sbjct: 279 GEIAKARRVFDSMKERNDAS-WQTVI---KIHE 307
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 41 VFSLIKQCKNIKQL---KQIHTQMLRTGLFFDPYSASKLFT---PCALGTFSSLEYAREM 94
+ S++ C ++ L KQ+H Q++R D Y AS L T C L ++ +
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG-----ELVKSKLI 388
Query: 95 FDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQ 154
FD+ P ++ WN++I Y+S ++ +F ++ + PNE TF + A
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC----- 443
Query: 155 FRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISG 214
+ GMV E+ L I S+ + + A C+ M+G+
Sbjct: 444 -----SYAGMV-----EEGLKIYESMESVFGVKPITAHYACMVDMLGR------------ 481
Query: 215 FVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLE 257
G F +A+E+ M V+PD ++L AC L+
Sbjct: 482 ---AGRFNEAMEMIDSM---TVEPDAAVWGSLLGACRTHSQLD 518
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 308 MKKQGIKLNCYLTT-------SLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAM 360
MK Q + Y TT I ++ G + +A ++F + S+ + W++M+AG+
Sbjct: 1 MKSQILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFA 60
Query: 361 YGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVK 420
R+A LF M + N +++ ++ +G +DE R F+ M P VV
Sbjct: 61 NLMPRDARKLFDEMPDR----NIISWNGLVSGYMKNGEIDEARKVFDLM-PERNVVS--- 112
Query: 421 HYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGALLG---------ACKIHENV 467
+T +V G +D A KMP S L+G ACK++E +
Sbjct: 113 -WTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI 167
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/622 (36%), Positives = 354/622 (56%), Gaps = 16/622 (2%)
Query: 36 HHPHPVFSLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMF 95
H+ H + L + + + K +H +++ G+ A+ L G + +A ++F
Sbjct: 5 HYLHQL-QLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVN--VYGKCGAASHALQVF 61
Query: 96 DQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQF 155
D++P + W +++ A + + ++ +F + +S P++F F ++KA A L
Sbjct: 62 DEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSI 121
Query: 156 RVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGF 215
G+ +H I S + +D + +SL+ YA CG L A VF I K+ +SW +M+SG+
Sbjct: 122 DHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGY 181
Query: 216 VQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLS 275
+ G E+A+EL+R + ++N+ + A++S + G+ EA S+F E++
Sbjct: 182 AKSGRKEEALELFRILPVKNL----YSWTALISGFVQS-----GK-GLEAFSVFTEMRRE 231
Query: 276 KNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDK 335
+ D S++ ACA L A G Q+H + G +++ +LIDMY KC ++
Sbjct: 232 RVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIA 291
Query: 336 ALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSH 395
A ++F ++ RDV W+++I G A +G +AL L+ M VKPN VTF ++ ACSH
Sbjct: 292 AKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSH 351
Query: 396 SGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWG 455
G V++GR F M YG+ P ++HYTC++D+LGR+GLLDEA I MP P W
Sbjct: 352 VGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWA 411
Query: 456 ALLGACKIHENVELAEYACSHLL-ELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVS 514
ALL ACK ++ HL+ + ++ +LLSNIYA W VSE R+ +
Sbjct: 412 ALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Query: 515 GLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLK-SFGYVPNRSHLLQL 573
++K+PG SS+EV E F AGE+SHPL ++I+ L ++ ++ GYVP+ S +L
Sbjct: 472 EVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHD 531
Query: 574 VEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREI 633
++E++ +E+ L HSER A+AYGL+ P PIRIVKNLRVCGDCH V K IS++ REI
Sbjct: 532 MDEQE-KEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREI 590
Query: 634 LLRDRYRFHHFRGGNCSCMDYW 655
++RD R+HHF+GG CSC D+W
Sbjct: 591 IVRDATRYHHFKGGKCSCNDFW 612
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/566 (39%), Positives = 313/566 (55%), Gaps = 45/566 (7%)
Query: 91 AREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAA 150
AR++FD++P L TWN +I + +F ++ + + P+E+T V +A
Sbjct: 129 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFSGSA 187
Query: 151 RLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNS 210
L +GQ IHG IK E DL +++SL H Y G L V + +++V+WN+
Sbjct: 188 GLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNT 247
Query: 211 MISGFVQGGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFH 270
+I G Q G E + LY+ M+ +S C
Sbjct: 248 LIMGNAQNGCPETVLYLYKMMK--------------ISGC-------------------- 273
Query: 271 ELQLSKNVNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKC 330
P++ TFV+VLS+C+ L G QIHA+ K G + +SLI MY+KC
Sbjct: 274 --------RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 325
Query: 331 GNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQE-AKVKPNAVTFTNV 389
G L A + F + D +WS+MI+ + +G G EA++LF+ M E ++ N V F N+
Sbjct: 326 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 385
Query: 390 LCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVP 449
L ACSHSGL D+G F+ M YG PG+KHYTC+VD+LGRAG LD+A I MPI
Sbjct: 386 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 445
Query: 450 GASVWGALLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRK 509
+W LL AC IH+N E+A+ +L+++P + VLL+N++A +W +VSE+RK
Sbjct: 446 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 505
Query: 510 HMRVSGLKKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSH 569
MR +KKE G S E GE+H+F G+ S KEIYS L E+ +K GY P+ +
Sbjct: 506 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 565
Query: 570 LLQLVEEEDVQEQALNLHSERLAIAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLY 629
+L ++EE+ +E L HSE+LA+A+ L+ + PIRI+KNLRVC DCH K IS +
Sbjct: 566 VLHDMDEEE-KESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIK 624
Query: 630 NREILLRDRYRFHHFRGGNCSCMDYW 655
NREI LRD RFHHF G CSC DYW
Sbjct: 625 NREITLRDGSRFHHFINGKCSCGDYW 650
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 182/438 (41%), Gaps = 85/438 (19%)
Query: 66 LFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMI 125
L DP A+ + T C+ G RE F + + N++T +L + S QS
Sbjct: 12 LSVDP--ATAIATLCSKGNL------REAFQRF-RLNIFTNTSLFTPFIQSCTTRQSLPS 62
Query: 126 FLQL---VYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIH 182
QL + S + ++F ++ ++L F A++G + K ++ SN LI+
Sbjct: 63 GKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNY----MSSNILIN 118
Query: 183 FYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEMENVKPDEVT 242
Y GDL A VF + + + +WN+MI+G +Q F E+ + L+REM PDE T
Sbjct: 119 GYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYT 178
Query: 243 MVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACAQLGAMDIGV 302
+ +V S A R ++ IG
Sbjct: 179 LGSVFSGSAGLR------------------------------------------SVSIGQ 196
Query: 303 QIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYG 362
QIH K G++L+ + +SL MY + G L V ++ R++ W+T+I G A G
Sbjct: 197 QIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG 256
Query: 363 CGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHY 422
C L L+ M+ + +PN +TF VL +CS + +G+ + + G V
Sbjct: 257 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI-GASSVVAVV 315
Query: 423 TCMVDMLGRAGLL-DEAVEFIEKMPIVPGASVWGALLGACKIH----------------E 465
+ ++ M + G L D A F E+ +W +++ A H
Sbjct: 316 SSLISMYSKCGCLGDAAKAFSERED--EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT 373
Query: 466 NVELAE-------YACSH 476
N+E+ E YACSH
Sbjct: 374 NMEINEVAFLNLLYACSH 391
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/603 (35%), Positives = 334/603 (55%), Gaps = 47/603 (7%)
Query: 54 LKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTLIRAY 113
LK++H L+ ++ A+ A SL YA+ +F I + +WN LI +
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYA--KCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 114 SSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVIKSSFEDD 173
+ S +P S LQ+ S P+ FT ++ A ++L R+G+ +HG +I++ E D
Sbjct: 472 AQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 174 LFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIELYREMEM 233
LF+ S++ Y CG+L +F + K +VSWN++I+G++Q GF ++A+ ++R+M +
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 234 ENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEFTFVSVLSACA 293
++ ++M+ V AC+ L GR
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLGR--------------------------------- 617
Query: 294 QLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTVKSRDVFVWST 353
+ HA K ++ + ++ SLIDMY K G++ ++ +VF+ +K + W+
Sbjct: 618 ---------EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 668
Query: 354 MIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHSGLVDEGRMFFNQMEPVY 413
MI G+ ++G +EA+ LF MQ P+ +TF VL AC+HSGL+ EG + +QM+ +
Sbjct: 669 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF 728
Query: 414 GVVPGVKHYTCMVDMLGRAGLLDEAVEFI-EKMPIVPGASVWGALLGACKIHENVELAEY 472
G+ P +KHY C++DMLGRAG LD+A+ + E+M +W +LL +C+IH+N+E+ E
Sbjct: 729 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 788
Query: 473 ACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGLKKEPGCSSIEVNGEIH 532
+ L ELEPE VLLSN+YA GKW++V ++R+ M L+K+ GCS IE+N ++
Sbjct: 789 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVF 848
Query: 533 KFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEEEDVQEQALNLHSERLA 592
F+ GE +EI S + ++ GY P+ + + EE+ EQ L HSE+LA
Sbjct: 849 SFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQ-LRGHSEKLA 907
Query: 593 IAYGLISVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREILLRDRYRFHHFRGGNCSCM 652
+ YGLI IR+ KNLR+C DCH AKLISK+ REI++RD RFHHF+ G CSC
Sbjct: 908 LTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCG 967
Query: 653 DYW 655
DYW
Sbjct: 968 DYW 970
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 171/359 (47%), Gaps = 53/359 (14%)
Query: 49 KNIKQLKQIHTQMLR--TGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTW 106
K+I+ ++IH Q++ T L D +++ T A+ S + +R +FD + NL+ W
Sbjct: 98 KDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAM--CGSPDDSRFVFDALRSKNLFQW 154
Query: 107 NTLIRAYSSSAEPIQSFMIFLQLVYNSPYFPNEFTFPFVIKAAARLVQFRVGQAIHGMVI 166
N +I +YS + + F++++ + P+ FT+P VIKA A + +G A+HG+V+
Sbjct: 155 NAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVV 214
Query: 167 KSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEKAIE 226
K+ +D+F+ N+L+ FY G + A +F ++ ++++VSWNSMI F GF E++
Sbjct: 215 KTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFL 274
Query: 227 LYREMEMEN----VKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDE 282
L EM EN PD T+V VL CA++R++ G+
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK---------------------- 312
Query: 283 FTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHT 342
+H K + L +L+DMY+KCG + A +F
Sbjct: 313 --------------------GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 352
Query: 343 VKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEA--KVKPNAVTFTNVLCACSHSGLV 399
+++V W+TM+ GF+ G D+ +M VK + VT N + C H +
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 231/520 (44%), Gaps = 80/520 (15%)
Query: 35 QHHPHPVFSLIKQCKNIKQLK---QIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYA 91
H +P +IK C + + +H +++TGL D + + L + GT + A
Sbjct: 186 DHFTYPC--VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVS--FYGTHGFVTDA 241
Query: 92 REMFDQIPQPNLYTWNTLIRAYSSSAEPIQSFMIFLQLVY---NSPYFPNEFTFPFVIKA 148
++FD +P+ NL +WN++IR +S + +SF++ +++ + + P+ T V+
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 149 AARLVQFRVGQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSW 208
AR + +G+ +HG +K + +L ++N+L+ Y+ CG + A +F M K+VVSW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 209 NSMISGFVQGGFFEKAIELYREMEM--ENVKPDEVTMVAVLSAC---------------A 251
N+M+ GF G ++ R+M E+VK DEVT++ + C +
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 252 KKRDLEFGRWPNEAL--------------SIFHELQLSKNVN------------------ 279
K++ + A +FH ++ SK VN
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGGHAQSNDPRLS 480
Query: 280 -------------PDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDM 326
PD FT S+LSAC++L ++ +G ++H + + ++ + ++ S++ +
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 327 YTKCGNLDKALEVFHTVKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTF 386
Y CG L +F ++ + + W+T+I G+ G AL +F +M ++ ++
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600
Query: 387 TNVLCACSHSGLVDEGRMFFNQMEPVYGVVPGVKHYTC-MVDMLGRAGLLDEAVEFIEKM 445
V ACS + GR + ++ C ++DM + G + ++ + +
Sbjct: 601 MPVFGACSLLPSLRLGRE--AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658
Query: 446 PIVPGASVWGALLGACKIHENVELAEYACSHLLELEPENH 485
AS W A++ IH LA+ A E++ H
Sbjct: 659 KEKSTAS-WNAMIMGYGIH---GLAKEAIKLFEEMQRTGH 694
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 147/367 (40%), Gaps = 65/367 (17%)
Query: 110 IRAYSSSAEPIQSFMIFLQLVYNSPYFPNEF-----TFPFVIKAAARLVQFRVGQAIHGM 164
I + + + +SF + V + + F +++A+ + +G+ IH +
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 165 VIKSS-FEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQGGFFEK 223
V S+ +D + +I YA+CG + VF + K++ WN++IS + +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRN----- 164
Query: 224 AIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKNVNPDEF 283
ELY +E L F E+ + ++ PD F
Sbjct: 165 --ELY----------------------------------DEVLETFIEMISTTDLLPDHF 188
Query: 284 TFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKALEVFHTV 343
T+ V+ ACA + + IG+ +H + K G+ + ++ +L+ Y G + AL++F +
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 344 KSRDVFVWSTMIAGFAMYGCGREALDLFSRMQE----AKVKPNAVTFTNVLCACSHSGLV 399
R++ W++MI F+ G E+ L M E P+ T VL C+ +
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 400 DEGRMFFNQMEPVYGVVPGVK------HYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASV 453
G+ V+G ++ ++DM + G + A + I KM
Sbjct: 309 GLGK-------GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVS 360
Query: 454 WGALLGA 460
W ++G
Sbjct: 361 WNTMVGG 367
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 334/622 (53%), Gaps = 57/622 (9%)
Query: 43 SLIKQCKNIKQLKQIHTQMLRTGLFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPN 102
++I++C + Q+KQ+ + L G F + S+L CA+ F L +A ++F IP+P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 103 LYTWNTLIRAYSSSAEPIQSFMIFLQLVYNSPYFP-----NEFTFPFVIKAAARLVQFRV 157
WN +IR ++ S+ P +F + ++ S + T F +KA AR +
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 158 GQAIHGMVIKSSFEDDLFISNSLIHFYAICGDLAMAYCVFVMIGKKDVVSWNSMISGFVQ 217
+H + + D + +L+ Y+ GDL AY +F + +DV SWN++I+G V
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 218 GGFFEKAIELYREMEMENVKPDEVTMVAVLSACAKKRDLEFGRWPNEALSIFHELQLSKN 277
G +EA+ ++ ++ ++
Sbjct: 188 GNR-----------------------------------------ASEAMELYKRME-TEG 205
Query: 278 VNPDEFTFVSVLSACAQLGAMDIGVQIHAKMKKQGIKLNCYLTTSLIDMYTKCGNLDKAL 337
+ E T V+ L AC+ LG + G I N ++ + IDMY+KCG +DKA
Sbjct: 206 IRRSEVTVVAALGACSHLGDVKEGENIFHGYSND----NVIVSNAAIDMYSKCGFVDKAY 261
Query: 338 EVFHT-VKSRDVFVWSTMIAGFAMYGCGREALDLFSRMQEAKVKPNAVTFTNVLCACSHS 396
+VF + V W+TMI GFA++G AL++F ++++ +KP+ V++ L AC H+
Sbjct: 262 QVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHA 321
Query: 397 GLVDEGRMFFNQMEPVYGVVPGVKHYTCMVDMLGRAGLLDEAVEFIEKMPIVPGASVWGA 456
GLV+ G FN M GV +KHY C+VD+L RAG L EA + I M ++P +W +
Sbjct: 322 GLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQS 380
Query: 457 LLGACKIHENVELAEYACSHLLELEPENHGALVLLSNIYAKTGKWDNVSELRKHMRVSGL 516
LLGA +I+ +VE+AE A + E+ N G VLLSN+YA G+W +V +R M +
Sbjct: 381 LLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQV 440
Query: 517 KKEPGCSSIEVNGEIHKFLAGESSHPLCKEIYSKLDEIVARLKSFGYVPNRSHLLQLVEE 576
KK PG S IE G IH+F + SH +EIY K+DEI +++ GYV +L + E
Sbjct: 441 KKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGE 500
Query: 577 EDVQEQALNLHSERLAIAYGLI---SVEPSQPIRIVKNLRVCGDCHTVAKLISKLYNREI 633
E+ +E AL HSE+LA+AYGL+ + P+R++ NLR+CGDCH V K ISK+Y REI
Sbjct: 501 EE-KENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREI 559
Query: 634 LLRDRYRFHHFRGGNCSCMDYW 655
++RDR RFH F+ G+CSC D+W
Sbjct: 560 IVRDRVRFHRFKDGSCSCRDFW 581
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,229,145
Number of Sequences: 539616
Number of extensions: 9989534
Number of successful extensions: 31021
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 22914
Number of HSP's gapped (non-prelim): 2276
length of query: 655
length of database: 191,569,459
effective HSP length: 124
effective length of query: 531
effective length of database: 124,657,075
effective search space: 66192906825
effective search space used: 66192906825
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)