BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035660
(448 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
Length = 413
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 113/281 (40%), Gaps = 63/281 (22%)
Query: 102 TIGQ--PPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWY 159
TI Q P + + V+D G LWV DC Q + +SS+Y + C + C
Sbjct: 25 TINQRTPLVSENLVVDLGGRFLWV------DCDQNY-------VSSTYRPVRCRTSQCSL 71
Query: 160 SPNVKCNFL----------NQC-LYNQTYIRGPSASGVLATEQLIFKTSD---EGKI-RV 204
S ++ C N C ++ + + + G +A + + +++D G++ V
Sbjct: 72 SGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTV 131
Query: 205 QDVVFGCGHDNGKFEDRHLSGVFG---LGFSRLSLVSQLGSTFSY------CVGNL---- 251
+F C + SGV G LG +R++L SQ S FS+ C+
Sbjct: 132 PRFIFSCAPTS--LLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSN 189
Query: 252 ------NDPYYFHNKLV-----------LGHGARIEGDSTPLEVINGRYYITLEAISIGG 294
NDPY F ++ L + ST E + Y+I +++I I
Sbjct: 190 SVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP-SVEYFIGVKSIKINS 248
Query: 295 KMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLH 335
K++ ++ + + + GG I + + T L + Y A+
Sbjct: 249 KIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTE 289
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp
pdb|3VLB|C Chain C, Crystal Structure Of Xeg-Edgp
Length = 413
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 113/281 (40%), Gaps = 63/281 (22%)
Query: 102 TIGQ--PPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEYCWY 159
TI Q P + + V+D G LWV DC Q + +SS+Y + C + C
Sbjct: 25 TINQRTPLVSENLVVDLGGRFLWV------DCDQNY-------VSSTYRPVRCRTSQCSL 71
Query: 160 SPNVKCNFL----------NQC-LYNQTYIRGPSASGVLATEQLIFKTSD---EGKI-RV 204
S ++ C N C ++ + + + G +A + + +++D G++ V
Sbjct: 72 SGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTV 131
Query: 205 QDVVFGCGHDNGKFEDRHLSGVFG---LGFSRLSLVSQLGSTFSY------CVGNL---- 251
+F C + SGV G LG +R++L SQ S FS+ C+
Sbjct: 132 PRFIFSCAPTS--LLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSN 189
Query: 252 ------NDPYYFHNKLV-----------LGHGARIEGDSTPLEVINGRYYITLEAISIGG 294
NDPY F ++ L + ST E + Y+I +++I I
Sbjct: 190 SVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP-SVEYFIGVKSIKINS 248
Query: 295 KMLDIDPDIFTRKTWDNGGVIIDSGSSATWLVKAGYDALLH 335
K++ ++ + + + GG I + + T L + Y A+
Sbjct: 249 KIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTE 289
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At
1.62 Angstroms Resolution
pdb|1AVF|A Chain A, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
pdb|1AVF|J Chain J, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
Length = 329
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 144/370 (38%), Gaps = 86/370 (23%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWV-----QCRPCLDCSQQFGPIFDPSMSSSYADLP 151
+F +IG PP + DTGS+ LWV Q + C S+ F+PS SS+Y+
Sbjct: 14 YFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSR-----FNPSESSTYST-- 66
Query: 152 CYSEYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGC 211
N ++ Y G S +G + L ++ I+V + FG
Sbjct: 67 -----------------NGQTFSLQYGSG-SLTGFFGYDTLTVQS-----IQVPNQEFGL 103
Query: 212 GHDN--GKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCV--GNLNDPY---YFHNKLVLG 264
+ F G+ GL + LS V + + V G L P Y N+
Sbjct: 104 SENEPGTNFVYAQFDGIMGLAYPALS-VDEATTAMQGMVQEGALTSPVFSVYLSNQQGSS 162
Query: 265 HGARIEG--DSTPLEVINGRYY-----------ITLEAISIGGKMLDIDPDIFTRKTWDN 311
GA + G DS+ + G+ Y I +E IGG+ W +
Sbjct: 163 GGAVVFGGVDSS---LYTGQIYWAPVTQELYWQIGIEEFLIGGQ----------ASGWCS 209
Query: 312 GG--VIIDSGSSATWLVKAGYDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHDLIGFP 369
G I+D+G+S + + ALL + D + ++ + + + P
Sbjct: 210 EGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDEY-GQFLVNC----------NSIQNLP 258
Query: 370 AVTFHFAGGAELVLDVDSLFFQRWPHSFC-MAVLPSFVNGENYTSLSLIGMMAQQNYNVA 428
++TF G E L S + +C + V P++++ +N L ++G + ++Y
Sbjct: 259 SLTF-IINGVEFPLPPSSYILSN--NGYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSV 315
Query: 429 YDIGGKKLAF 438
YD+G ++ F
Sbjct: 316 YDLGNNRVGF 325
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6
pdb|1UH8|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 8.0
pdb|1UH9|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 7.0
Length = 325
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 36/147 (24%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY-ADLPCYSE 155
++ TIG P DTGS+ LW+ C +C + +DP+ SS+Y AD +S
Sbjct: 17 YYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSRQ-TKYDPNQSSTYQADGRTWS- 74
Query: 156 YCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQ-----LIFKTSDEGKIRVQDVVFG 210
+Y G SASG+LA + L+ K + + F
Sbjct: 75 -------------------ISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFA 115
Query: 211 CGHDNGKFEDRHLSGVFGLGFSRLSLV 237
G ++ G+ GLGF ++ V
Sbjct: 116 SGPND---------GLLGLGFDTITTV 133
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L.
pdb|1B5F|C Chain C, Native Cardosin A From Cynara Cardunculus L
Length = 239
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 24/141 (17%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQ-QFGPIFDPSMSSSYADLPCYSE 155
+F IG PP + DTGS++LWV C++ + +++ S SS+Y + +
Sbjct: 15 YFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGA 74
Query: 156 YCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHDN 215
+ + ++ F + + ++ EQ + +DE DN
Sbjct: 75 IIYGTGSITGFFSQDSV---------TIGDLVVKEQDFIEATDEA-------------DN 112
Query: 216 GKFEDRHLSGVFGLGFSRLSL 236
F R G+ GL F +S+
Sbjct: 113 -VFLHRLFDGILGLSFQTISV 132
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of
Cathepsin E
Length = 351
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 25/141 (17%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADLPCYSEY 156
+F +IG PP + DTGS+ LWV C + + F PS SS+Y+ P S
Sbjct: 25 YFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQ-PGQS-- 81
Query: 157 CWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRV-QDVVFGCGHDN 215
++ Y G S SG++ +Q+ S EG V Q
Sbjct: 82 ----------------FSIQYGTG-SLSGIIGADQV----SVEGLTVVGQQFGESVTEPG 120
Query: 216 GKFEDRHLSGVFGLGFSRLSL 236
F D G+ GLG+ L++
Sbjct: 121 QTFVDAEFDGILGLGYPSLAV 141
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|B Chain B, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|C Chain C, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|D Chain D, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|E Chain E, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|F Chain F, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|G Chain G, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3FV3|H Chain H, Secreted Aspartic Protease 1 From Candida Parapsilosis In
Complex With Pepstatin A
pdb|3TNE|A Chain A, The Crystal Structure Of Protease Sapp1p From Candida
Parapsilosis In Complex With The Hiv Protease Inhibitor
Ritonavir
pdb|3TNE|B Chain B, The Crystal Structure Of Protease Sapp1p From Candida
Parapsilosis In Complex With The Hiv Protease Inhibitor
Ritonavir
Length = 339
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 102 TIGQPPIPQFTVMDTGSTLLWV-----QCRPCLDCSQQFGPIFDPSMSSSYADL 150
++G Q ++DTGS+ WV QC +DC F PS SSSY +L
Sbjct: 19 SVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSS--GTFTPSSSSSYKNL 70
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic
Proteinase From Rhizopus Chinensis. Implications For A
Mechanism Of Action
pdb|4APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|5APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|6APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|2APR|A Chain A, Structure And Refinement At 1.8 Angstroms Resolution Of
The Aspartic Proteinase From Rhizopus Chinensis
Length = 325
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 36/147 (24%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY-ADLPCYSE 155
++ TIG P DTGS+ LW+ C +C +DP+ SS+Y AD +S
Sbjct: 17 YYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQ-TKYDPNQSSTYQADGRTWS- 74
Query: 156 YCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQ-----LIFKTSDEGKIRVQDVVFG 210
+Y G SASG+LA + L+ K + + F
Sbjct: 75 -------------------ISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFA 115
Query: 211 CGHDNGKFEDRHLSGVFGLGFSRLSLV 237
G ++ G+ GLGF ++ V
Sbjct: 116 SGPND---------GLLGLGFDTITTV 133
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant,
Mvv
Length = 329
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
++ + T+G PP ++DTGS+ LWV C + +D SSSY
Sbjct: 15 YYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSY 65
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A
pdb|1FQ4|A Chain A, Crystal Structure Of A Complex Between Hydroxyethylene
Inhibitor Cp- 108,420 And Yeast Aspartic Proteinase A
pdb|1FQ5|A Chain A, X-Ray Struture Of A Cyclic Statine Inhibitor Pd-129,541
Bound To Yeast Proteinase A
pdb|1FQ6|A Chain A, X-Ray Structure Of Glycol Inhibitor Pd-133,450 Bound To
Saccharopepsin
pdb|1FQ7|A Chain A, X-Ray Structure Of Inhibitor Cp-72,647 Bound To
Saccharopepsin
pdb|1FQ8|A Chain A, X-Ray Structure Of Difluorostatine Inhibitor Cp81,198
Bound To Saccharopepsin
Length = 329
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
++ + T+G PP ++DTGS+ LWV C + +D SSSY
Sbjct: 15 YYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSY 65
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant
Inhibitor
pdb|1DPJ|A Chain A, The Structure Of Proteinase A Complexed With Ia3 Peptide
Inhibitor
pdb|1FMU|A Chain A, Structure Of Native Proteinase A In P3221 Space Group.
pdb|1FMX|A Chain A, Structure Of Native Proteinase A In The Space Group P21
pdb|1FMX|B Chain B, Structure Of Native Proteinase A In The Space Group P21
Length = 329
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
++ + T+G PP ++DTGS+ LWV C + +D SSSY
Sbjct: 15 YYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSY 65
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution
Length = 320
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 95 SLFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADL 150
S +F IG PP V DTGS+ LWV C + FDP SS++ +L
Sbjct: 11 SQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNL 66
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin
pdb|3VCM|B Chain B, Crystal Structure Of Human Prorenin
Length = 335
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 113/313 (36%), Gaps = 66/313 (21%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSYADLPCYS 154
++ IG PP V DTGS+ +WV C L + + +FD S SSSY
Sbjct: 20 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGT-E 78
Query: 155 EYCWYSPNVKCNFLNQCLYNQTYIRGPSASGVLATEQLIFKTSDEGKIRVQDVVFGCGHD 214
YS FL+Q + + G+ T+ G++ +
Sbjct: 79 LTLRYSTGTVSGFLSQDII--------TVGGITVTQMF-------GEVTEMPAL------ 117
Query: 215 NGKFEDRHLSGVFGLGFSRLSLVSQLGSTFSYCV--GNLNDPY--YFHNKLVLGHGARIE 270
F GV G+GF + + ++ F + G L + +++N+ LG G +
Sbjct: 118 --PFMLAEFDGVVGMGFIEQA-IGRVTPIFDNIISQGVLKEDVFSFYYNRDSLG-GQIVL 173
Query: 271 GDSTPLE----------VINGRYYITLEAISIGGKMLDIDPDIFTRKTWDNGGVIIDSGS 320
G S P + G + I ++ +S+G L + D ++D+G+
Sbjct: 174 GGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCE---------DGCLALVDTGA 224
Query: 321 SATWLVKAGYDALLHEVESLLDMWLTRYR-FDSWTLCYRGTASHDLIGFPAVTFHFAGGA 379
S +E L++ + R FD C G P ++FH GG
Sbjct: 225 SYI-------SGSTSSIEKLMEALGAKKRLFDYVVKCNEGPT------LPDISFHL-GGK 270
Query: 380 ELVLDVDSLFFQR 392
E L FQ
Sbjct: 271 EYTLTSADYVFQE 283
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972
pdb|1CMS|A Chain A, The Three-Dimensional Structure Of Recombinant Bovine
Chymosin At 2.3 Angstroms Resolution
pdb|4CMS|A Chain A, X-Ray Analyses Of Aspartic Proteinases Iv. Structure And
Refinement At 2.2 Angstroms Resolution Of Bovine
Chymosin
pdb|4AA8|A Chain A, Bovine Chymosin At 1.8a Resolution
Length = 323
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 95 SLFFMNFTIGQPPIPQFTVM-DTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADL 150
S +F +G PP +FTV+ DTGS+ WV C + + FDP SS++ +L
Sbjct: 14 SQYFGKIYLGTPP-QEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNL 69
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation,
Kinetic Characterization And X-Ray Analysis At
2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf
Chymosin
Length = 323
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 95 SLFFMNFTIGQPPIPQFTVM-DTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYADL 150
S +F +G PP +FTV+ DTGS+ WV C + + FDP SS++ +L
Sbjct: 14 SQYFGKIYLGTPP-QEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNL 69
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren
pdb|3D91|B Chain B, Human Renin In Complex With Remikiren
pdb|3G6Z|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G6Z|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3K1W|A Chain A, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3K1W|B Chain B, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3OWN|A Chain A, Potent Macrocyclic Renin Inhibitors
pdb|3OWN|B Chain B, Potent Macrocyclic Renin Inhibitors
Length = 341
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSY 147
++ IG PP V DTGS+ +WV C L + + +FD S SSSY
Sbjct: 20 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSY 72
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX
pdb|2I4Q|B Chain B, Human ReninPF02342674 COMPLEX
Length = 336
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSY 147
++ IG PP V DTGS+ +WV C L + + +FD S SSSY
Sbjct: 16 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSY 68
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1HRN|B Chain B, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1BIM|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIM|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|3GW5|A Chain A, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3GW5|B Chain B, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3KM4|A Chain A, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
pdb|3KM4|B Chain B, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
Length = 337
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSY 147
++ IG PP V DTGS+ +WV C L + + +FD S SSSY
Sbjct: 17 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSY 69
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G24|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2FS4|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2FS4|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1N|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1N|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1R|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1R|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1Y|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1Y|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G20|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G20|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G21|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G21|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|A Chain A, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|B Chain B, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
Length = 333
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSY 147
++ IG PP V DTGS+ +WV C L + + +FD S SSSY
Sbjct: 13 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSY 65
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKS|B Chain B, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKT|A Chain A, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2BKT|B Chain B, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2IKO|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKO|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKU|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IKU|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IL2|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IL2|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2V0Z|C Chain C, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V0Z|O Chain O, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V10|C Chain C, Crystal Structure Of Renin With Inhibitor 9
pdb|2V10|O Chain O, Crystal Structure Of Renin With Inhibitor 9
pdb|2V11|C Chain C, Crystal Structure Of Renin With Inhibitor 6
pdb|2V11|O Chain O, Crystal Structure Of Renin With Inhibitor 6
pdb|2V12|C Chain C, Crystal Structure Of Renin With Inhibitor 8
pdb|2V12|O Chain O, Crystal Structure Of Renin With Inhibitor 8
pdb|1BBS|A Chain A, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1BBS|B Chain B, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1RNE|A Chain A, The Crystal Structure Of Recombinant Glycosylated Human
Renin Alone And In Complex With A Transition State
Analog Inhibitor
pdb|2REN|A Chain A, Structure Of Recombinant Human Renin, A Target For
Cardiovascular- Active Drugs, At 2.5 Angstroms
Resolution
pdb|2V13|A Chain A, Crystal Structure Of Renin With Inhibitor 7
pdb|2V16|C Chain C, Crystal Structure Of Renin With Inhibitor 3
pdb|2V16|O Chain O, Crystal Structure Of Renin With Inhibitor 3
pdb|3G72|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G72|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3OQF|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OQF|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OOT|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OOT|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3Q3T|A Chain A, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3Q3T|B Chain B, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3SFC|A Chain A, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3SFC|B Chain B, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3Q4B|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q4B|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3VSW|A Chain A, Human Renin In Complex With Compound 8
pdb|3VSW|B Chain B, Human Renin In Complex With Compound 8
pdb|3VSX|A Chain A, Human Renin In Complex With Compound 18
pdb|3VSX|B Chain B, Human Renin In Complex With Compound 18
pdb|3VYD|A Chain A, Human Renin In Complex With Inhibitor 6
pdb|3VYD|B Chain B, Human Renin In Complex With Inhibitor 6
pdb|3VYE|A Chain A, Human Renin In Complex With Inhibitor 7
pdb|3VYE|B Chain B, Human Renin In Complex With Inhibitor 7
pdb|3VYF|A Chain A, Human Renin In Complex With Inhibitor 9
pdb|3VYF|B Chain B, Human Renin In Complex With Inhibitor 9
pdb|4GJ8|A Chain A, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ8|B Chain B, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ9|A Chain A, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJ9|B Chain B, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJA|A Chain A, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJA|B Chain B, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJB|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJB|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJC|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJC|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJD|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
pdb|4GJD|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
Length = 340
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSY 147
++ IG PP V DTGS+ +WV C L + + +FD S SSSY
Sbjct: 20 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSY 72
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|C Chain C, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|E Chain E, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|G Chain G, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
Length = 383
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSY 147
++ IG PP V DTGS+ +WV C L + + +FD S SSSY
Sbjct: 63 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSY 115
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAD|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3O9L|A Chain A, Design And Optimisation Of New Piperidines As Renin
Inhibitors
pdb|3O9L|C Chain C, Design And Optimisation Of New Piperidines As Renin
Inhibitors
Length = 166
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 103 IGQPPIPQFTVMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSY 147
IG PP V DTGS+ +WV C L + + +FD S SSSY
Sbjct: 26 IGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSY 72
>pdb|2XVN|A Chain A, A. Fumigatus Chitinase A1 Phenyl-Methylguanylurea Complex
pdb|2XVN|B Chain B, A. Fumigatus Chitinase A1 Phenyl-Methylguanylurea Complex
pdb|2XVN|C Chain C, A. Fumigatus Chitinase A1 Phenyl-Methylguanylurea Complex
Length = 309
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 330 YDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHD---LIGFPAVTFHFAGGAELVLD-V 385
Y+ +S +D L + FD+W + +AS D +G PA G L D V
Sbjct: 204 YNTAACSAKSFIDTSLGTFNFDAWVTVLKASASKDAKLYVGLPASETAANQGYYLTPDEV 263
Query: 386 DSL---FFQRWPHSFCMAVLPSFVNGEN 410
+SL + R+P +F +L EN
Sbjct: 264 ESLVSTYMDRYPDTFGGIMLWEATASEN 291
>pdb|2XUC|A Chain A, Natural Product-Guided Discovery Of A Fungal Chitinase
Inhibitor
pdb|2XUC|B Chain B, Natural Product-Guided Discovery Of A Fungal Chitinase
Inhibitor
pdb|2XUC|C Chain C, Natural Product-Guided Discovery Of A Fungal Chitinase
Inhibitor
pdb|2XVP|A Chain A, Chia1 From Aspergillus Fumigatus, Apostructure
pdb|2XVP|B Chain B, Chia1 From Aspergillus Fumigatus, Apostructure
pdb|2XTK|A Chain A, Chia1 From Aspergillus Fumigatus In Complex With
Acetazolamide
pdb|2XTK|B Chain B, Chia1 From Aspergillus Fumigatus In Complex With
Acetazolamide
Length = 310
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 330 YDALLHEVESLLDMWLTRYRFDSWTLCYRGTASHD---LIGFPAVTFHFAGGAELVLD-V 385
Y+ +S +D L + FD+W + +AS D +G PA G L D V
Sbjct: 205 YNTAACSAKSFIDTSLGTFNFDAWVTVLKASASKDAKLYVGLPASETAANQGYYLTPDEV 264
Query: 386 DSL---FFQRWPHSFCMAVLPSFVNGEN 410
+SL + R+P +F +L EN
Sbjct: 265 ESLVSTYMDRYPDTFGGIMLWEATASEN 292
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of
A Pepsin From Atlantic Cod (Gadus Morhua)
Length = 324
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSYAD 149
++ +IG PP + DTGS+ LWV C + F P SS+Y +
Sbjct: 14 YYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVE 66
>pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And
Refinement At 2.0 Angstroms Resolution Of The Aspartic
Proteinase From Mucor Pusillus
Length = 361
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 102 TIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGP-IFDPSMSSSYAD 149
+IG P + + DTGS+ WV + C + G FDPS SS++ +
Sbjct: 25 SIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKE 73
>pdb|1PFZ|A Chain A, Proplasmepsin Ii From Plasmodium Falciparum
pdb|1PFZ|B Chain B, Proplasmepsin Ii From Plasmodium Falciparum
pdb|1PFZ|C Chain C, Proplasmepsin Ii From Plasmodium Falciparum
pdb|1PFZ|D Chain D, Proplasmepsin Ii From Plasmodium Falciparum
Length = 380
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 49 ENAANRIQRAINISIARFAYLQAKVKSYSS----NNIIDYQADVFPSKVFS--LFFMNFT 102
ENA +RI + I + Y++ V +S N + D F +F+ +
Sbjct: 14 ENAHDRILKTIKTHKLK-NYIKESVNFLNSGLTKTNYLGSSNDNIELVDFQNIMFYGDAE 72
Query: 103 IGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
+G P ++DTGS LWV C ++D S S +Y
Sbjct: 73 VGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTY 117
>pdb|2BJU|A Chain A, Plasmepsin Ii Complexed With A Highly Active Achiral
Inhibitor
Length = 453
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 49 ENAANRIQRAINISIARFAYLQAKVKSYSS----NNIIDYQADVFPSKVFS--LFFMNFT 102
ENA +RI + I + Y++ V +S N + D F +F+ +
Sbjct: 87 ENAHDRILKTIKTHKLK-NYIKESVNFLNSGLTKTNYLGSSNDNIELVDFQNIMFYGDAE 145
Query: 103 IGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
+G P ++DTGS LWV C ++D S S +Y
Sbjct: 146 VGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTY 190
>pdb|1LS5|A Chain A, Crystal Structure Of Plasmepsin Iv From P. Falciparum In
Complex With Pepstatin A
pdb|1LS5|B Chain B, Crystal Structure Of Plasmepsin Iv From P. Falciparum In
Complex With Pepstatin A
Length = 328
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 96 LFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSYADLPCY 153
+F+ IG P + DTGS LWV C + CS + ++D S S SY
Sbjct: 15 MFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSIGCSTKH--LYDASASKSYEKDGTK 72
Query: 154 SEYCWYSPNVKCNF 167
E + S V+ F
Sbjct: 73 VEISYGSGTVRGYF 86
>pdb|2ANL|A Chain A, X-Ray Crystal Structure Of The Aspartic Protease
Plasmepsin 4 From The Malarial Parasite Plasmodium
Malariae Bound To An Allophenylnorstatine Based
Inhibitor
pdb|2ANL|B Chain B, X-Ray Crystal Structure Of The Aspartic Protease
Plasmepsin 4 From The Malarial Parasite Plasmodium
Malariae Bound To An Allophenylnorstatine Based
Inhibitor
Length = 327
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 113 VMDTGSTLLWVQCRPC--LDCSQQFGPIFDPSMSSSYADLPCYSEYCWYSPNVKCNFLNQ 170
+ DTGS LWV + C + CS + ++D S S SY E + S V+ F ++
Sbjct: 32 IFDTGSANLWVPSKKCNSIGCSTKH--LYDSSKSKSYEKDGTKVEITYGSGTVR-GFFSK 88
Query: 171 CLYNQTYIRGP 181
L Y+ P
Sbjct: 89 DLVTLGYLSLP 99
>pdb|1MIQ|A Chain A, Crystal Structure Of Proplasmepsin From The Human Malarial
Pathogen Plasmodium Vivax
pdb|1MIQ|B Chain B, Crystal Structure Of Proplasmepsin From The Human Malarial
Pathogen Plasmodium Vivax
Length = 375
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 113 VMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
+ DTGS LWV + C ++D S S SY
Sbjct: 80 IFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSY 114
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Query: 256 YFHNKLVLGHGARIEGDSTPLEVINGRYYITLEAISIGGKMLDIDPDI-----FTRKTWD 310
Y +N +LG A I+G S P++V N Y + A+++ D DI F WD
Sbjct: 373 YLNNNPLLGVNAIIKGLSGPIKVNNVNYNGVMPAMNLN------DEDIANVITFVLNNWD 426
Query: 311 NGG 313
N G
Sbjct: 427 NAG 429
>pdb|2RMP|A Chain A, Rmp-Pepstatin A Complex
pdb|2ASI|A Chain A, Aspartic Proteinase
Length = 361
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 102 TIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGP-IFDPSMSSSY 147
+IG P + DTGS+ WV + C G FDPS SS++
Sbjct: 25 SIGTPGQDFLLLFDTGSSDTWVPHKGCTKSEGCVGSRFFDPSASSTF 71
>pdb|1QS8|A Chain A, Crystal Structure Of The P. Vivax Aspartic Proteinase
Plasmepsin Complexed With The Inhibitor Pepstatin A
pdb|1QS8|B Chain B, Crystal Structure Of The P. Vivax Aspartic Proteinase
Plasmepsin Complexed With The Inhibitor Pepstatin A
Length = 329
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 113 VMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
+ DTGS LWV + C ++D S S SY
Sbjct: 34 IFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSY 68
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase.
pdb|1QDM|B Chain B, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase.
pdb|1QDM|C Chain C, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley
Vacuolar Aspartic Proteinase
Length = 478
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 97 FFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPC 128
+F +G PP + DTGS+ LWV C
Sbjct: 54 YFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKC 85
>pdb|1M43|A Chain A, Crystal Structure Of Pmii In Complex With Pepstatin A To
2.4 A
pdb|1M43|B Chain B, Crystal Structure Of Pmii In Complex With Pepstatin A To
2.4 A
pdb|1LEE|A Chain A, Crystal Structure Of Plasmepsin From P. Falciparum In
Complex With Inhibitor Rs367
pdb|1LF2|A Chain A, Crystal Structure Of Plasmepsin Ii From P Falciparum In
Complex With Inhibitor Rs370
Length = 331
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 96 LFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
+F+ + +G P ++DTGS LWV C ++D S S +Y
Sbjct: 17 MFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTY 68
>pdb|3F9Q|A Chain A, Re-Refinement Of Uncomplexed Plasmepsin Ii From Plasmodium
Falciparum
Length = 329
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 96 LFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
+F+ + +G P ++DTGS LWV C ++D S S +Y
Sbjct: 15 MFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTY 66
>pdb|1SME|A Chain A, Plasmepsin Ii, A Hemoglobin-Degrading Enzyme From
Plasmodium Falciparum, In Complex With Pepstatin A
pdb|1SME|B Chain B, Plasmepsin Ii, A Hemoglobin-Degrading Enzyme From
Plasmodium Falciparum, In Complex With Pepstatin A
pdb|1ME6|A Chain A, Crystal Structure Of Plasmepsin Ii, An Aspartyl Protease
From Plasmodium Falciparum, In Complex With A
Statine-Based Inhibitor
pdb|1ME6|B Chain B, Crystal Structure Of Plasmepsin Ii, An Aspartyl Protease
From Plasmodium Falciparum, In Complex With A
Statine-Based Inhibitor
pdb|1XE5|A Chain A, Structure Of Plasmepsin Ii In Complex Of An Pepstatin
Analogue
pdb|1XE5|B Chain B, Structure Of Plasmepsin Ii In Complex Of An Pepstatin
Analogue
pdb|1XE6|A Chain A, Structure Of Plasmepsin Ii In Complex Of An Pepstatin
Analogue
pdb|1XE6|B Chain B, Structure Of Plasmepsin Ii In Complex Of An Pepstatin
Analogue
pdb|2IGX|A Chain A, Achiral, Cheap And Potent Inhibitors Of Plasmepsins Ii
pdb|2IGY|A Chain A, Achiral, Cheap And Potent Inhibitors Of Plasmepsins Ii
pdb|2IGY|B Chain B, Achiral, Cheap And Potent Inhibitors Of Plasmepsins Ii
pdb|2R9B|A Chain A, Structural Analysis Of Plasmepsin 2 From Plasmodium
Falciparum Complexed With A Peptide-Based Inhibitor
pdb|2R9B|B Chain B, Structural Analysis Of Plasmepsin 2 From Plasmodium
Falciparum Complexed With A Peptide-Based Inhibitor
Length = 329
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 96 LFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
+F+ + +G P ++DTGS LWV C ++D S S +Y
Sbjct: 15 MFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTY 66
>pdb|1LF3|A Chain A, Crystal Structure Of Plasmepsin Ii From P Falciparum In
Complex With Inhibitor Eh58
pdb|1LF4|A Chain A, Structure Of Plasmepsin Ii
pdb|1XDH|A Chain A, Structure Of Plasmepsin Ii In Complex With Pepstatin A
pdb|1XDH|B Chain B, Structure Of Plasmepsin Ii In Complex With Pepstatin A
pdb|1W6H|A Chain A, Novel Plasmepsin Ii-inhibitor Complex
pdb|1W6H|B Chain B, Novel Plasmepsin Ii-inhibitor Complex
pdb|1W6I|A Chain A, Plasmepsin Ii-Pepstatin A Complex
pdb|1W6I|C Chain C, Plasmepsin Ii-Pepstatin A Complex
Length = 331
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 96 LFFMNFTIGQPPIPQFTVMDTGSTLLWVQCRPCLDCSQQFGPIFDPSMSSSY 147
+F+ + +G P ++DTGS LWV C ++D S S +Y
Sbjct: 17 MFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTY 68
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,162,716
Number of Sequences: 62578
Number of extensions: 609873
Number of successful extensions: 1052
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1014
Number of HSP's gapped (non-prelim): 57
length of query: 448
length of database: 14,973,337
effective HSP length: 102
effective length of query: 346
effective length of database: 8,590,381
effective search space: 2972271826
effective search space used: 2972271826
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)