BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035666
MNYLAIMKSCHMCCFFSCLMLMMLTIIIFCNLGELSGISNKISHSFHEDKSSCTNRDISI
SQSKDSTSGIPQYIVQIVNTCVSGCAPSDIHLHCGWFASARVVNPRTFKRVSYDDCLVNG
GMPLRPSQVIRFTYSNSFMYPIAFKSAKFCCA

High Scoring Gene Products

Symbol, full name Information P value
AT1G32583 protein from Arabidopsis thaliana 2.0e-24
TPD1
AT4G24972
protein from Arabidopsis thaliana 1.0e-22
AT4G32090 protein from Arabidopsis thaliana 3.0e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035666
        (152 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1009023131 - symbol:AT1G32583 "AT1G32583" spec...   279  2.0e-24   1
TAIR|locus:1006230300 - symbol:TPD1 "AT4G24972" species:3...   263  1.0e-22   1
TAIR|locus:2116702 - symbol:AT4G32090 species:3702 "Arabi...    98  3.0e-05   1


>TAIR|locus:1009023131 [details] [associations]
            symbol:AT1G32583 "AT1G32583" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0009408 "response to heat"
            evidence=IEP] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009408
            EMBL:DQ487503 IPI:IPI00656613 RefSeq:NP_001031128.1
            UniGene:At.49435 EnsemblPlants:AT1G32583.1 GeneID:3766880
            KEGG:ath:AT1G32583 TAIR:At1g32583 OMA:VEIFNSC PhylomeDB:Q1G3T1
            Genevestigator:Q2V4J6 Uniprot:Q1G3T1
        Length = 179

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 49/96 (51%), Positives = 66/96 (68%)

Query:    53 CTNRDISISQSKDST--SGIPQYIVQIVNTCVSGCAPSDIHLHCGWFASARVVNPRTFKR 110
             C+  DI + Q   +   SG+P Y V+I N+CVS C  ++IH+ CGWF+S R+VNPR F+R
Sbjct:    80 CSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRR 139

Query:   111 VSYDDCLVNGGMPLRPSQVIRFTYSNSFMYPIAFKS 146
             + YDDCLVN G PL P Q + F Y+NSF YP++  S
Sbjct:   140 LDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVAS 175


>TAIR|locus:1006230300 [details] [associations]
            symbol:TPD1 "AT4G24972" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0001709 "cell fate determination"
            evidence=IMP] [GO:0048653 "anther development" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0048653 GO:GO:0001709 EMBL:AY394846
            IPI:IPI00526307 RefSeq:NP_974612.1 UniGene:At.47965 DIP:DIP-29700N
            IntAct:Q6TLJ2 EnsemblPlants:AT4G24972.1 GeneID:2745725
            KEGG:ath:AT4G24972 TAIR:At4g24972 eggNOG:NOG325440
            HOGENOM:HOG000077765 InParanoid:Q6TLJ2 OMA:RIHINCG
            ProtClustDB:CLSN2915210 Genevestigator:Q6TLJ2 Uniprot:Q6TLJ2
        Length = 176

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 49/113 (43%), Positives = 73/113 (64%)

Query:    35 LSGISNKISHSFHEDK--SSCTNRDISISQS--KDSTSGIPQYIVQIVNTCVSGCAPSDI 90
             LS  + K   S   ++    C + DI ++Q+  +   +GIP Y+V+I N C+SGC  S I
Sbjct:    57 LSPGTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRI 116

Query:    91 HLHCGWFASARVVNPRTFKRVSYDDCLVNGGMPLRPSQVIRFTYSNSFMYPIA 143
             H++CGWF+SA+++NPR FKR+ YDDCLVN G PL     + F Y+N+F Y ++
Sbjct:   117 HINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLS 169


>TAIR|locus:2116702 [details] [associations]
            symbol:AT4G32090 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006486
            "protein glycosylation" evidence=IEA] [GO:0008378
            "galactosyltransferase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] InterPro:IPR002659 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006486 GO:GO:0008378
            EMBL:AL021636 EMBL:AL161580 PANTHER:PTHR11214 IPI:IPI00538727
            PIR:T04636 RefSeq:NP_194937.1 UniGene:At.63745
            EnsemblPlants:AT4G32090.1 GeneID:829340 KEGG:ath:AT4G32090
            TAIR:At4g32090 eggNOG:NOG262319 HOGENOM:HOG000243728
            InParanoid:O49383 OMA:ATAQFTY PhylomeDB:O49383
            ProtClustDB:CLSN2686018 Genevestigator:O49383 Uniprot:O49383
        Length = 124

 Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 29/102 (28%), Positives = 45/102 (44%)

Query:    53 CTNRDISISQSKDSTS--GIPQYIVQIVNTCVSGCAPSDIHLHCGWFASARVVNPRTFKR 110
             CT   I I   +      G P++ V ++NTC   C    + L CG FA A+ V P   + 
Sbjct:    24 CTFGKIQIGAVRTGREIGGQPEWKVTVINTC--NCFQKHVTLSCGGFAPAKPVKPLLLQP 81

Query:   111 VSYDDCLVNGGMPLRPSQVIRFTYSNS-FMY-PIAFKSAKFC 150
                + CL+  G  L      +FTY+   +++ P+  K    C
Sbjct:    82 QG-NTCLMIKGAALPAGATAQFTYAGQPYIFRPVGSKVDPSC 122


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.135   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      152       136   0.00091  102 3  11 22  0.36    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  141 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.76u 0.12s 12.88t   Elapsed:  00:00:01
  Total cpu time:  12.76u 0.12s 12.88t   Elapsed:  00:00:01
  Start:  Fri May 10 03:02:23 2013   End:  Fri May 10 03:02:24 2013

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