BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035666
         (152 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A8MS78|Y1583_ARATH Uncharacterized protein At1g05835 OS=Arabidopsis thaliana
           GN=At1g05835 PE=2 SV=1
          Length = 127

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 10/108 (9%)

Query: 48  EDKSSCTNRDISISQSKDSTSGIPQYIVQIVNTCVSGCAPSDIHLHCGWFASARVVNPRT 107
           E KSS    + ++ Q++       ++ V+++N C   C   ++ L C  F  + +V+P T
Sbjct: 27  EGKSS----EPAVRQTQVKWREGKKFRVEVMNKC-PMCPIINLRLKCQGFPQS-LVDP-T 79

Query: 108 FKRV---SYDDCLVNGGMPLRPSQVIRFTYSNSFMYPIAFKSAKFCCA 152
           F RV   S  +C+VN G+PL P Q + F YSN+  + +   S  F C 
Sbjct: 80  FLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQCE 127


>sp|Q9NXF7|DCA16_HUMAN DDB1- and CUL4-associated factor 16 OS=Homo sapiens GN=DCAF16 PE=1
           SV=1
          Length = 216

 Score = 34.3 bits (77), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 60  ISQSKDSTSGIPQYIVQIVNTCVSGCAPSDIHLHCGWFASARVVNPRT 107
           +S++    + IP+Y+ QI N+CVSGC        CGW         RT
Sbjct: 152 LSRTLSRATPIPEYLKQIPNSCVSGCC-------CGWLTKTVKETTRT 192


>sp|A7TSL2|PMIP_VANPO Mitochondrial intermediate peptidase OS=Vanderwaltozyma polyspora
           (strain ATCC 22028 / DSM 70294) GN=OCT1 PE=3 SV=1
          Length = 787

 Score = 32.7 bits (73), Expect = 0.81,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 5/44 (11%)

Query: 27  IIFCNLGELSGISNKISHSFHEDKSSCTNRDISISQSKDSTSGI 70
           II+C+L E SG ++  +H      + C +RDIS  +++DST+ I
Sbjct: 491 IIYCDLFERSGKTSNAAHF-----TICCSRDISPYETEDSTTQI 529


>sp|Q568E2|ZN750_DANRE Zinc finger protein 750 OS=Danio rerio GN=znf750 PE=2 SV=2
          Length = 607

 Score = 32.0 bits (71), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 40  NKISHSFHEDKSSCTNRDISISQSKDSTSGIPQYIVQI 77
           NKIS +F     +C +  +S+S  KD  S IP +  QI
Sbjct: 140 NKISSAFSPVARTCESEALSLSPHKDDQSTIPHFYQQI 177


>sp|P33913|YEJA_ECOLI Uncharacterized protein YejA OS=Escherichia coli (strain K12)
           GN=yejA PE=4 SV=3
          Length = 604

 Score = 30.0 bits (66), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 46  FHEDKSSCTNRDISISQSKDSTSGIPQYIVQIVNTCVSGCAPSDIHL 92
           FH D S  T RD+  +  K  T G+PQ+ +    T V   AP  + +
Sbjct: 125 FH-DGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRI 170


>sp|B2FTJ0|SYI_STRMK Isoleucine--tRNA ligase OS=Stenotrophomonas maltophilia (strain
           K279a) GN=ileS PE=3 SV=1
          Length = 943

 Score = 30.0 bits (66), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 5/39 (12%)

Query: 87  PSDIHL-----HCGWFASARVVNPRTFKRVSYDDCLVNG 120
           P+D++L     H GWF S+ +      KR  Y  CL +G
Sbjct: 571 PADLYLEGSDQHRGWFQSSLLTGVAIDKRAPYKQCLTHG 609


>sp|B4SP18|SYI_STRM5 Isoleucine--tRNA ligase OS=Stenotrophomonas maltophilia (strain
           R551-3) GN=ileS PE=3 SV=1
          Length = 943

 Score = 30.0 bits (66), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 5/39 (12%)

Query: 87  PSDIHL-----HCGWFASARVVNPRTFKRVSYDDCLVNG 120
           P+D++L     H GWF S+ +      KR  Y  CL +G
Sbjct: 571 PADLYLEGSDQHRGWFQSSLLTGVAIDKRAPYKQCLTHG 609


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.329    0.137    0.447 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,162,001
Number of Sequences: 539616
Number of extensions: 1776615
Number of successful extensions: 4804
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4799
Number of HSP's gapped (non-prelim): 12
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 56 (26.2 bits)