Query 035673
Match_columns 190
No_of_seqs 226 out of 1646
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 05:14:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035673.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035673hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1552 Predicted alpha/beta h 100.0 5.3E-30 1.1E-34 175.2 13.3 160 1-162 94-254 (258)
2 PHA02857 monoglyceride lipase; 99.9 7.5E-23 1.6E-27 147.6 13.5 158 1-160 58-273 (276)
3 PLN02385 hydrolase; alpha/beta 99.9 4.2E-23 9.2E-28 153.4 12.2 161 1-161 121-346 (349)
4 PLN02298 hydrolase, alpha/beta 99.9 1.3E-22 2.9E-27 149.8 12.7 163 1-163 93-320 (330)
5 TIGR03343 biphenyl_bphD 2-hydr 99.9 5.1E-22 1.1E-26 143.6 14.4 155 1-158 66-281 (282)
6 PLN02965 Probable pheophorbida 99.9 7E-22 1.5E-26 141.0 14.5 158 1-160 36-253 (255)
7 KOG4391 Predicted alpha/beta h 99.9 3.3E-23 7.2E-28 138.0 6.8 162 1-162 112-284 (300)
8 PLN02824 hydrolase, alpha/beta 99.9 5E-22 1.1E-26 144.5 12.9 156 1-159 61-293 (294)
9 TIGR03611 RutD pyrimidine util 99.9 1.4E-21 3E-26 138.9 12.2 155 1-158 45-256 (257)
10 TIGR02240 PHA_depoly_arom poly 99.9 1.4E-21 3.1E-26 141.0 12.3 156 1-161 57-267 (276)
11 PRK13604 luxD acyl transferase 99.9 7.4E-21 1.6E-25 136.0 14.7 140 1-144 70-247 (307)
12 PRK10749 lysophospholipase L2; 99.9 2.6E-21 5.5E-26 142.9 12.8 158 1-160 87-329 (330)
13 KOG1455 Lysophospholipase [Lip 99.9 1.2E-21 2.6E-26 137.1 10.3 160 1-160 88-312 (313)
14 TIGR03056 bchO_mg_che_rel puta 99.9 5.6E-21 1.2E-25 137.6 13.7 155 1-158 60-278 (278)
15 PF00326 Peptidase_S9: Prolyl 99.9 1.1E-21 2.4E-26 136.4 8.9 146 17-162 43-211 (213)
16 PRK03592 haloalkane dehalogena 99.9 7.2E-21 1.6E-25 138.5 12.8 158 1-161 59-290 (295)
17 PRK06489 hypothetical protein; 99.9 1.4E-20 2.9E-25 140.6 13.3 158 1-161 111-358 (360)
18 PRK00870 haloalkane dehalogena 99.9 2.1E-20 4.6E-25 136.5 13.9 157 1-160 79-301 (302)
19 PRK10673 acyl-CoA esterase; Pr 99.9 5.8E-21 1.3E-25 136.1 10.5 154 1-159 48-254 (255)
20 PRK07581 hypothetical protein; 99.9 2.5E-20 5.5E-25 138.1 13.8 158 1-161 77-337 (339)
21 TIGR02427 protocat_pcaD 3-oxoa 99.8 2.5E-20 5.5E-25 131.7 11.6 153 1-157 45-250 (251)
22 PLN02679 hydrolase, alpha/beta 99.8 3.6E-20 7.9E-25 138.1 12.9 157 1-160 120-357 (360)
23 PRK03204 haloalkane dehalogena 99.8 7.7E-20 1.7E-24 132.5 14.2 154 1-157 66-285 (286)
24 PRK05077 frsA fermentation/res 99.8 7.3E-20 1.6E-24 138.2 14.3 158 1-161 228-413 (414)
25 KOG4409 Predicted hydrolase/ac 99.8 6.8E-20 1.5E-24 130.6 13.1 156 1-159 122-363 (365)
26 PLN03087 BODYGUARD 1 domain co 99.8 7.2E-20 1.6E-24 139.4 14.0 156 1-159 238-478 (481)
27 PRK10349 carboxylesterase BioH 99.8 4.8E-20 1E-24 131.6 12.4 149 1-158 45-254 (256)
28 PLN02578 hydrolase 99.8 9.9E-20 2.2E-24 135.6 13.6 153 1-158 118-353 (354)
29 PLN02652 hydrolase; alpha/beta 99.8 9.3E-20 2E-24 136.7 13.2 160 1-162 169-389 (395)
30 TIGR01250 pro_imino_pep_2 prol 99.8 2E-19 4.3E-24 129.7 13.5 154 1-158 59-288 (288)
31 PF00561 Abhydrolase_1: alpha/ 99.8 5.1E-20 1.1E-24 129.0 9.7 150 1-153 6-228 (230)
32 KOG1454 Predicted hydrolase/ac 99.8 2.9E-19 6.3E-24 130.7 13.8 158 1-161 92-325 (326)
33 PRK10566 esterase; Provisional 99.8 3.2E-19 7E-24 126.8 13.7 157 1-160 60-248 (249)
34 KOG4178 Soluble epoxide hydrol 99.8 3.3E-19 7.2E-24 126.6 13.1 158 1-160 77-320 (322)
35 COG1647 Esterase/lipase [Gener 99.8 7E-20 1.5E-24 122.6 8.6 154 1-158 48-242 (243)
36 TIGR01738 bioH putative pimelo 99.8 2E-19 4.2E-24 126.8 11.3 148 1-157 36-245 (245)
37 COG2267 PldB Lysophospholipase 99.8 8.7E-19 1.9E-23 127.0 14.0 159 1-161 67-295 (298)
38 PRK11126 2-succinyl-6-hydroxy- 99.8 9E-19 1.9E-23 124.0 13.5 148 1-159 33-241 (242)
39 PLN02511 hydrolase 99.8 5.6E-19 1.2E-23 132.8 12.1 160 1-163 135-368 (388)
40 PRK08775 homoserine O-acetyltr 99.8 4.9E-19 1.1E-23 131.4 11.5 155 1-160 105-339 (343)
41 PRK14875 acetoin dehydrogenase 99.8 5.7E-19 1.2E-23 132.4 11.6 152 1-159 163-370 (371)
42 TIGR03695 menH_SHCHC 2-succiny 99.8 1.4E-18 2.9E-23 122.7 12.9 153 1-157 33-250 (251)
43 TIGR01249 pro_imino_pep_1 prol 99.8 1.9E-18 4.2E-23 126.4 13.7 155 1-160 59-305 (306)
44 PLN02894 hydrolase, alpha/beta 99.8 2.8E-18 6E-23 129.5 14.1 160 1-163 137-388 (402)
45 PF12697 Abhydrolase_6: Alpha/ 99.8 4.5E-19 9.7E-24 123.4 8.9 145 1-148 30-223 (228)
46 PLN03084 alpha/beta hydrolase 99.8 3.9E-18 8.5E-23 127.4 13.7 154 1-158 159-382 (383)
47 PF12695 Abhydrolase_5: Alpha/ 99.8 1.9E-18 4.1E-23 113.0 10.6 114 1-141 32-145 (145)
48 TIGR03100 hydr1_PEP hydrolase, 99.8 2.8E-18 6.1E-23 123.5 11.9 157 1-158 63-273 (274)
49 TIGR01607 PST-A Plasmodium sub 99.8 3.2E-18 6.9E-23 126.3 11.9 158 1-158 80-331 (332)
50 TIGR01392 homoserO_Ac_trn homo 99.8 6.3E-18 1.4E-22 125.9 11.9 155 1-158 78-351 (351)
51 PRK10985 putative hydrolase; P 99.8 1.5E-17 3.2E-22 122.6 12.6 158 1-161 93-321 (324)
52 KOG2984 Predicted hydrolase [G 99.8 1.4E-18 2.9E-23 115.0 5.9 155 1-159 77-275 (277)
53 PLN02211 methyl indole-3-aceta 99.8 8.4E-17 1.8E-21 115.8 15.1 155 1-159 51-269 (273)
54 COG1506 DAP2 Dipeptidyl aminop 99.7 9.8E-18 2.1E-22 132.7 9.8 146 17-162 452-618 (620)
55 COG2945 Predicted hydrolase of 99.7 4.2E-17 9E-22 107.1 10.0 139 1-158 66-205 (210)
56 PRK11071 esterase YqiA; Provis 99.7 9.3E-17 2E-21 109.4 11.6 129 20-158 45-189 (190)
57 PRK00175 metX homoserine O-ace 99.7 1.7E-16 3.6E-21 119.3 13.4 143 18-162 128-376 (379)
58 PLN02980 2-oxoglutarate decarb 99.7 1.2E-16 2.6E-21 137.4 13.4 158 1-161 1403-1640(1655)
59 PRK11460 putative hydrolase; P 99.7 1.6E-16 3.5E-21 111.6 11.4 120 22-162 87-210 (232)
60 PF05448 AXE1: Acetyl xylan es 99.7 9.7E-17 2.1E-21 117.0 8.6 139 19-160 156-320 (320)
61 PRK06765 homoserine O-acetyltr 99.7 7.6E-16 1.6E-20 115.4 12.8 141 17-159 141-387 (389)
62 TIGR01836 PHA_synth_III_C poly 99.7 8.4E-16 1.8E-20 114.5 11.4 156 1-159 100-349 (350)
63 PF02230 Abhydrolase_2: Phosph 99.7 4.8E-16 1E-20 108.3 9.2 110 34-160 101-215 (216)
64 PF01738 DLH: Dienelactone hyd 99.7 1.1E-15 2.4E-20 106.6 9.8 127 19-160 79-217 (218)
65 KOG4667 Predicted esterase [Li 99.6 3.8E-15 8.2E-20 99.7 10.4 154 1-158 68-256 (269)
66 PF06821 Ser_hydrolase: Serine 99.6 2.5E-15 5.4E-20 100.3 8.6 130 21-157 38-169 (171)
67 COG3208 GrsT Predicted thioest 99.6 1.3E-14 2.8E-19 99.4 10.4 152 2-158 40-234 (244)
68 PF08840 BAAT_C: BAAT / Acyl-C 99.6 1.6E-14 3.4E-19 100.1 10.6 143 20-162 4-212 (213)
69 PF06500 DUF1100: Alpha/beta h 99.6 5.5E-15 1.2E-19 109.3 8.5 157 1-161 224-410 (411)
70 PRK05855 short chain dehydroge 99.6 1E-14 2.2E-19 115.4 10.6 62 98-161 231-293 (582)
71 TIGR01838 PHA_synth_I poly(R)- 99.6 2.2E-14 4.7E-19 110.7 11.9 138 1-141 226-455 (532)
72 COG0429 Predicted hydrolase of 99.6 3.1E-14 6.6E-19 101.5 10.7 159 1-161 110-341 (345)
73 COG0400 Predicted esterase [Ge 99.6 3.9E-14 8.5E-19 96.8 10.3 120 21-160 82-205 (207)
74 PLN02872 triacylglycerol lipas 99.6 1.9E-14 4.1E-19 108.0 8.8 67 95-161 318-390 (395)
75 PRK05371 x-prolyl-dipeptidyl a 99.6 2.1E-13 4.5E-18 110.0 14.9 162 1-163 285-522 (767)
76 COG3458 Acetyl esterase (deace 99.5 3.1E-14 6.7E-19 98.5 8.4 139 19-160 157-317 (321)
77 TIGR02821 fghA_ester_D S-formy 99.5 7.7E-13 1.7E-17 95.5 15.2 133 24-158 124-272 (275)
78 KOG2382 Predicted alpha/beta h 99.5 9.9E-14 2.2E-18 98.9 9.9 157 1-160 86-313 (315)
79 TIGR01840 esterase_phb esteras 99.5 1.8E-13 3.8E-18 95.1 10.2 128 1-128 49-196 (212)
80 COG0412 Dienelactone hydrolase 99.5 6.8E-13 1.5E-17 93.2 12.2 129 17-161 91-234 (236)
81 PRK10115 protease 2; Provision 99.5 5.2E-13 1.1E-17 106.9 12.9 145 17-161 503-676 (686)
82 PLN02442 S-formylglutathione h 99.5 5.1E-13 1.1E-17 96.7 11.7 108 35-142 140-263 (283)
83 KOG1838 Alpha/beta hydrolase [ 99.5 8.6E-13 1.9E-17 97.3 11.9 160 1-162 160-390 (409)
84 KOG2564 Predicted acetyltransf 99.5 2.3E-13 5E-18 94.7 7.1 157 1-161 108-328 (343)
85 COG3545 Predicted esterase of 99.5 2.7E-12 5.9E-17 83.6 11.4 132 21-159 42-178 (181)
86 PF06342 DUF1057: Alpha/beta h 99.4 3.7E-12 8.1E-17 89.2 12.4 126 1-128 68-240 (297)
87 COG2021 MET2 Homoserine acetyl 99.4 1E-12 2.3E-17 95.2 9.7 141 17-159 127-367 (368)
88 PLN00021 chlorophyllase 99.4 8.4E-12 1.8E-16 91.2 13.4 134 1-143 85-242 (313)
89 TIGR03101 hydr2_PEP hydrolase, 99.4 9.2E-13 2E-17 93.9 7.0 72 1-75 62-137 (266)
90 KOG3043 Predicted hydrolase re 99.4 3E-12 6.5E-17 86.5 8.0 124 18-161 102-241 (242)
91 PRK10162 acetyl esterase; Prov 99.4 1.7E-11 3.7E-16 90.2 11.6 143 17-161 130-316 (318)
92 PF08538 DUF1749: Protein of u 99.3 3.1E-12 6.7E-17 91.3 7.1 152 3-158 75-303 (303)
93 KOG2100 Dipeptidyl aminopeptid 99.3 7.4E-12 1.6E-16 100.9 10.1 162 1-162 564-749 (755)
94 COG0596 MhpC Predicted hydrola 99.3 6.1E-11 1.3E-15 83.8 13.6 151 1-156 56-278 (282)
95 PF05728 UPF0227: Uncharacteri 99.3 1.1E-10 2.4E-15 78.9 12.2 115 36-157 57-186 (187)
96 PRK07868 acyl-CoA synthetase; 99.3 4.7E-11 1E-15 99.8 12.5 66 96-162 293-363 (994)
97 TIGR00976 /NonD putative hydro 99.3 6.1E-11 1.3E-15 93.4 12.3 72 1-73 59-133 (550)
98 PF06028 DUF915: Alpha/beta hy 99.3 3.8E-11 8.1E-16 84.9 8.6 137 19-157 86-252 (255)
99 TIGR01839 PHA_synth_II poly(R) 99.3 6E-11 1.3E-15 91.4 10.1 123 16-141 268-481 (560)
100 COG4757 Predicted alpha/beta h 99.3 6.4E-11 1.4E-15 80.6 9.0 154 1-157 63-280 (281)
101 PF02129 Peptidase_S15: X-Pro 99.2 1.2E-10 2.7E-15 83.9 10.7 139 1-141 63-271 (272)
102 KOG2551 Phospholipase/carboxyh 99.2 1.9E-10 4.1E-15 77.8 10.5 122 22-162 92-222 (230)
103 PF03959 FSH1: Serine hydrolas 99.2 9.1E-11 2E-15 81.5 6.2 114 19-145 83-205 (212)
104 PF10142 PhoPQ_related: PhoPQ- 99.1 6E-10 1.3E-14 82.3 10.5 134 27-162 161-322 (367)
105 KOG2112 Lysophospholipase [Lip 99.1 9E-10 2E-14 74.0 10.2 112 33-159 88-203 (206)
106 KOG1553 Predicted alpha/beta h 99.1 1.9E-10 4.2E-15 82.6 6.3 117 1-117 274-400 (517)
107 PF10503 Esterase_phd: Esteras 99.1 1.1E-09 2.4E-14 75.8 9.5 109 19-127 78-196 (220)
108 PF09752 DUF2048: Uncharacteri 99.1 9.2E-10 2E-14 80.0 9.4 135 19-158 159-347 (348)
109 PF07859 Abhydrolase_3: alpha/ 99.1 4.3E-10 9.4E-15 78.0 6.8 125 16-142 46-209 (211)
110 KOG4627 Kynurenine formamidase 99.0 6.2E-10 1.3E-14 74.5 6.1 126 17-144 116-250 (270)
111 TIGR03230 lipo_lipase lipoprot 99.0 1.2E-09 2.5E-14 82.8 6.6 73 1-73 79-155 (442)
112 PRK04940 hypothetical protein; 99.0 2.9E-08 6.4E-13 66.1 11.9 114 38-158 60-178 (180)
113 COG4099 Predicted peptidase [G 99.0 5.2E-09 1.1E-13 74.0 8.2 86 25-128 256-343 (387)
114 COG0657 Aes Esterase/lipase [L 99.0 2.5E-08 5.4E-13 73.4 12.3 124 16-142 127-288 (312)
115 COG3571 Predicted hydrolase of 98.9 1.2E-08 2.7E-13 65.8 9.0 105 22-141 75-181 (213)
116 PF05677 DUF818: Chlamydia CHL 98.9 2.5E-08 5.3E-13 72.1 11.3 117 1-117 177-314 (365)
117 PF06057 VirJ: Bacterial virul 98.9 2.3E-08 5E-13 66.8 10.0 134 16-158 48-190 (192)
118 PF03096 Ndr: Ndr family; Int 98.9 7.8E-09 1.7E-13 73.4 7.8 155 2-160 62-279 (283)
119 KOG2281 Dipeptidyl aminopeptid 98.9 2.3E-08 4.9E-13 77.4 10.5 141 19-159 707-866 (867)
120 PF12715 Abhydrolase_7: Abhydr 98.9 2E-09 4.3E-14 79.1 4.3 110 21-132 209-336 (390)
121 TIGR01849 PHB_depoly_PhaZ poly 98.9 1.2E-08 2.6E-13 76.6 8.3 65 95-159 332-405 (406)
122 COG3243 PhaC Poly(3-hydroxyalk 98.8 2.1E-08 4.6E-13 74.3 8.5 120 19-141 164-370 (445)
123 PF00975 Thioesterase: Thioest 98.8 2.3E-08 5E-13 70.2 8.2 137 18-157 48-229 (229)
124 COG1073 Hydrolases of the alph 98.8 2.1E-09 4.6E-14 78.0 2.7 159 3-161 124-298 (299)
125 PF12740 Chlorophyllase2: Chlo 98.8 7.8E-08 1.7E-12 67.8 10.1 125 17-146 62-210 (259)
126 PF10230 DUF2305: Uncharacteri 98.8 1.4E-07 3E-12 67.8 11.4 56 16-71 59-121 (266)
127 PLN02733 phosphatidylcholine-s 98.8 2.5E-08 5.4E-13 76.0 7.2 72 1-74 126-203 (440)
128 KOG1515 Arylacetamide deacetyl 98.8 2.2E-07 4.7E-12 68.4 11.7 142 16-159 140-334 (336)
129 PF02273 Acyl_transf_2: Acyl t 98.8 2.2E-07 4.8E-12 64.2 10.5 134 7-144 70-240 (294)
130 cd00707 Pancreat_lipase_like P 98.7 9.8E-09 2.1E-13 74.1 3.6 54 20-73 94-148 (275)
131 KOG2931 Differentiation-relate 98.7 4.4E-07 9.5E-12 64.3 11.5 156 1-160 84-306 (326)
132 COG4814 Uncharacterized protei 98.7 3.5E-07 7.5E-12 63.5 10.8 141 17-159 117-286 (288)
133 COG1770 PtrB Protease II [Amin 98.7 2.5E-07 5.4E-12 72.1 10.9 135 16-150 505-665 (682)
134 PF03583 LIP: Secretory lipase 98.7 5.1E-07 1.1E-11 65.7 12.0 62 99-162 218-283 (290)
135 PF07224 Chlorophyllase: Chlor 98.7 3.6E-07 7.8E-12 63.8 9.8 123 16-143 90-232 (307)
136 PF00756 Esterase: Putative es 98.7 8.3E-08 1.8E-12 68.4 6.6 93 22-114 99-197 (251)
137 KOG2624 Triglyceride lipase-ch 98.6 3.7E-07 8E-12 68.6 9.2 140 20-161 145-399 (403)
138 KOG3253 Predicted alpha/beta h 98.6 3.3E-07 7.3E-12 70.7 7.5 97 36-142 248-346 (784)
139 PRK10439 enterobactin/ferric e 98.5 5.4E-07 1.2E-11 68.5 8.5 116 22-141 270-391 (411)
140 KOG2237 Predicted serine prote 98.5 2E-06 4.3E-11 67.0 9.7 146 16-161 527-706 (712)
141 PF07819 PGAP1: PGAP1-like pro 98.5 7.3E-07 1.6E-11 62.4 6.8 54 20-73 64-124 (225)
142 PF03403 PAF-AH_p_II: Platelet 98.5 2.8E-07 6E-12 69.4 4.9 88 36-141 226-315 (379)
143 COG4188 Predicted dienelactone 98.4 8.2E-07 1.8E-11 65.2 6.5 128 19-146 133-299 (365)
144 KOG3101 Esterase D [General fu 98.3 2.3E-07 5E-12 62.7 2.0 110 34-143 137-263 (283)
145 COG0627 Predicted esterase [Ge 98.3 6.2E-06 1.3E-10 60.4 9.4 136 24-160 136-311 (316)
146 COG2936 Predicted acyl esteras 98.3 1.5E-05 3.2E-10 62.1 11.0 71 2-73 87-160 (563)
147 COG3509 LpqC Poly(3-hydroxybut 98.3 1.5E-05 3.2E-10 56.9 10.0 56 17-72 123-179 (312)
148 KOG1551 Uncharacterized conser 98.3 1E-05 2.2E-10 56.8 8.4 57 103-161 309-367 (371)
149 PF12048 DUF3530: Protein of u 98.2 3.6E-05 7.7E-10 56.6 11.2 124 22-160 180-309 (310)
150 smart00824 PKS_TE Thioesterase 98.2 2.1E-05 4.6E-10 54.1 8.8 66 1-70 31-100 (212)
151 COG1505 Serine proteases of th 98.1 5.6E-06 1.2E-10 64.2 5.9 145 16-160 478-646 (648)
152 PF11339 DUF3141: Protein of u 98.1 8.3E-05 1.8E-09 57.2 11.8 48 95-142 292-349 (581)
153 PRK10252 entF enterobactin syn 98.1 4E-05 8.7E-10 66.7 11.0 151 2-160 1101-1293(1296)
154 PF08386 Abhydrolase_4: TAP-li 98.1 1.5E-05 3.2E-10 48.8 6.1 60 100-160 34-94 (103)
155 KOG3975 Uncharacterized conser 98.1 8.5E-05 1.9E-09 51.8 9.7 138 17-156 90-299 (301)
156 KOG3847 Phospholipase A2 (plat 98.0 1.4E-05 3.1E-10 57.4 5.8 88 36-141 239-328 (399)
157 PF05705 DUF829: Eukaryotic pr 97.9 0.00019 4.2E-09 50.9 9.9 59 99-157 177-240 (240)
158 COG3150 Predicted esterase [Ge 97.9 0.00043 9.2E-09 45.5 10.3 129 21-158 44-187 (191)
159 KOG4840 Predicted hydrolases o 97.9 0.00012 2.6E-09 50.3 7.9 55 17-73 88-145 (299)
160 TIGR03502 lipase_Pla1_cef extr 97.9 3.9E-05 8.4E-10 62.5 6.3 23 36-58 553-575 (792)
161 COG4287 PqaA PhoPQ-activated p 97.9 6.9E-05 1.5E-09 55.2 6.9 138 21-160 216-387 (507)
162 cd00741 Lipase Lipase. Lipase 97.8 0.00013 2.9E-09 47.9 7.6 68 36-115 26-98 (153)
163 COG2382 Fes Enterochelin ester 97.8 0.00028 6.2E-09 50.7 8.5 51 23-73 160-213 (299)
164 PF02450 LCAT: Lecithin:choles 97.7 0.00011 2.4E-09 55.8 5.9 52 19-73 103-161 (389)
165 PF11288 DUF3089: Protein of u 97.7 9.4E-05 2E-09 50.7 4.9 41 18-59 76-116 (207)
166 PF07519 Tannase: Tannase and 97.7 0.0013 2.8E-08 51.4 11.4 64 99-162 352-429 (474)
167 PF05990 DUF900: Alpha/beta hy 97.6 0.00024 5.2E-09 50.2 6.8 83 21-117 78-170 (233)
168 COG2819 Predicted hydrolase of 97.6 9.6E-05 2.1E-09 52.3 4.6 45 28-72 127-172 (264)
169 PF00151 Lipase: Lipase; Inte 97.6 0.0002 4.4E-09 53.1 6.0 55 21-75 133-190 (331)
170 PTZ00472 serine carboxypeptida 97.6 0.00029 6.3E-09 54.8 6.7 73 1-73 127-217 (462)
171 PF01764 Lipase_3: Lipase (cla 97.5 0.00021 4.5E-09 46.2 4.9 36 21-58 49-84 (140)
172 PF11187 DUF2974: Protein of u 97.5 0.00025 5.5E-09 49.6 5.4 49 23-71 69-122 (224)
173 KOG2565 Predicted hydrolases o 97.5 0.0014 2.9E-08 48.7 8.5 64 1-66 194-258 (469)
174 PF05577 Peptidase_S28: Serine 97.4 0.00029 6.4E-09 54.4 5.5 72 2-73 66-149 (434)
175 PF10340 DUF2424: Protein of u 97.4 0.0016 3.5E-08 48.8 8.9 57 17-75 176-238 (374)
176 COG3319 Thioesterase domains o 97.4 0.0007 1.5E-08 48.3 6.8 50 22-73 51-104 (257)
177 cd00519 Lipase_3 Lipase (class 97.3 0.00056 1.2E-08 48.2 5.4 37 36-72 126-168 (229)
178 PLN02517 phosphatidylcholine-s 97.3 0.00047 1E-08 54.3 4.8 54 17-72 194-263 (642)
179 cd00312 Esterase_lipase Estera 97.2 0.00038 8.2E-09 54.7 4.0 54 18-71 153-212 (493)
180 PF11144 DUF2920: Protein of u 97.2 0.014 2.9E-07 44.2 11.5 53 20-72 164-219 (403)
181 COG2272 PnbA Carboxylesterase 97.1 0.00062 1.3E-08 52.2 4.2 55 18-72 157-217 (491)
182 PLN02454 triacylglycerol lipas 97.1 0.0013 2.7E-08 49.9 5.6 53 20-72 210-271 (414)
183 PF00135 COesterase: Carboxyle 97.1 0.00089 1.9E-08 53.0 4.9 53 18-70 185-243 (535)
184 COG3946 VirJ Type IV secretory 97.0 0.0038 8.3E-08 46.9 7.3 128 16-157 306-446 (456)
185 KOG3724 Negative regulator of 97.0 0.0012 2.6E-08 53.4 4.7 50 20-69 157-217 (973)
186 PF06259 Abhydrolase_8: Alpha/ 96.9 0.0045 9.8E-08 41.7 6.4 51 20-71 92-143 (177)
187 KOG2183 Prolylcarboxypeptidase 96.9 0.0013 2.9E-08 49.4 3.9 52 19-70 148-201 (492)
188 COG4782 Uncharacterized protei 96.9 0.0055 1.2E-07 45.4 6.8 52 19-72 174-234 (377)
189 PF01674 Lipase_2: Lipase (cla 96.8 0.005 1.1E-07 43.0 5.9 37 20-59 60-96 (219)
190 PF04301 DUF452: Protein of un 96.8 0.0073 1.6E-07 41.8 6.5 33 37-70 56-88 (213)
191 KOG2369 Lecithin:cholesterol a 96.8 0.0031 6.7E-08 48.2 5.0 41 18-60 164-204 (473)
192 PLN02408 phospholipase A1 96.6 0.0035 7.6E-08 46.9 4.4 37 22-58 184-220 (365)
193 COG4947 Uncharacterized protei 96.6 0.0074 1.6E-07 40.0 5.2 50 24-75 89-139 (227)
194 PLN02571 triacylglycerol lipas 96.6 0.0043 9.3E-08 47.1 4.5 38 21-58 209-246 (413)
195 PLN00413 triacylglycerol lipas 96.5 0.0047 1E-07 47.6 4.5 35 21-57 269-303 (479)
196 PLN02934 triacylglycerol lipas 96.4 0.0054 1.2E-07 47.6 4.5 35 21-57 306-340 (515)
197 PLN02162 triacylglycerol lipas 96.4 0.0055 1.2E-07 47.1 4.4 22 36-57 276-297 (475)
198 PF01083 Cutinase: Cutinase; 96.4 0.012 2.5E-07 39.9 5.6 77 22-115 67-150 (179)
199 KOG4540 Putative lipase essent 96.4 0.0094 2E-07 42.8 5.1 50 18-70 258-307 (425)
200 COG5153 CVT17 Putative lipase 96.4 0.0094 2E-07 42.8 5.1 50 18-70 258-307 (425)
201 PLN02324 triacylglycerol lipas 96.3 0.0077 1.7E-07 45.8 4.7 38 21-58 198-235 (415)
202 COG1075 LipA Predicted acetylt 96.3 0.017 3.7E-07 43.2 6.3 52 22-73 110-165 (336)
203 PLN02802 triacylglycerol lipas 96.2 0.0077 1.7E-07 46.8 4.3 37 22-58 314-350 (509)
204 PF05057 DUF676: Putative seri 96.2 0.0079 1.7E-07 42.1 4.0 36 22-57 59-97 (217)
205 PF12146 Hydrolase_4: Putative 96.0 0.0078 1.7E-07 34.8 2.6 15 1-15 49-63 (79)
206 PLN02310 triacylglycerol lipas 95.9 0.014 3E-07 44.4 4.3 38 21-58 190-229 (405)
207 PLN02761 lipase class 3 family 95.9 0.014 3.1E-07 45.5 4.4 38 20-57 272-313 (527)
208 PLN02753 triacylglycerol lipas 95.8 0.015 3.2E-07 45.5 4.4 38 20-57 291-331 (531)
209 KOG1516 Carboxylesterase and r 95.5 0.016 3.4E-07 46.3 3.5 52 19-70 173-230 (545)
210 PLN02847 triacylglycerol lipas 95.4 0.028 6E-07 44.7 4.5 23 36-58 249-271 (633)
211 PLN02719 triacylglycerol lipas 95.4 0.027 5.9E-07 43.9 4.3 37 21-57 278-317 (518)
212 PLN03037 lipase class 3 family 95.3 0.028 6E-07 44.0 4.2 21 38-58 318-338 (525)
213 KOG4569 Predicted lipase [Lipi 95.2 0.03 6.5E-07 41.9 4.0 37 20-58 155-191 (336)
214 PF07082 DUF1350: Protein of u 95.1 0.7 1.5E-05 32.9 10.1 136 22-161 72-233 (250)
215 KOG2182 Hydrolytic enzymes of 95.0 0.078 1.7E-06 41.2 5.6 69 2-70 125-205 (514)
216 TIGR03712 acc_sec_asp2 accesso 94.9 0.97 2.1E-05 35.4 11.2 53 20-73 339-391 (511)
217 PF00450 Peptidase_S10: Serine 94.6 0.086 1.9E-06 40.5 5.2 59 100-158 330-414 (415)
218 PF03283 PAE: Pectinacetyleste 94.3 0.059 1.3E-06 40.8 3.7 38 19-57 137-175 (361)
219 PF06850 PHB_depo_C: PHB de-po 94.1 0.14 3E-06 34.9 4.7 60 100-159 134-201 (202)
220 PF02089 Palm_thioest: Palmito 93.9 0.13 2.8E-06 37.3 4.6 34 38-71 80-115 (279)
221 PF05277 DUF726: Protein of un 93.9 0.18 3.8E-06 37.9 5.4 66 36-115 218-290 (345)
222 PLN02213 sinapoylglucose-malat 93.9 0.27 5.8E-06 36.6 6.4 60 100-159 233-316 (319)
223 PLN02213 sinapoylglucose-malat 93.8 0.31 6.6E-06 36.3 6.5 72 1-72 7-96 (319)
224 PLN02633 palmitoyl protein thi 93.3 0.45 9.9E-06 35.0 6.4 34 38-71 94-130 (314)
225 KOG2541 Palmitoyl protein thio 92.5 1.2 2.6E-05 32.1 7.5 50 21-71 76-127 (296)
226 COG4553 DepA Poly-beta-hydroxy 91.9 4 8.6E-05 30.1 9.7 64 100-163 339-410 (415)
227 KOG3967 Uncharacterized conser 91.7 0.54 1.2E-05 32.7 4.9 34 36-69 188-224 (297)
228 PTZ00472 serine carboxypeptida 91.5 0.66 1.4E-05 36.5 5.9 61 99-159 363-458 (462)
229 PLN02606 palmitoyl-protein thi 91.3 0.79 1.7E-05 33.7 5.6 34 38-71 95-131 (306)
230 PF08237 PE-PPE: PE-PPE domain 90.9 0.58 1.3E-05 33.0 4.6 38 21-59 32-69 (225)
231 PLN03016 sinapoylglucose-malat 90.8 1.1 2.5E-05 34.9 6.5 60 100-159 347-430 (433)
232 PF05576 Peptidase_S37: PS-10 90.4 0.12 2.6E-06 39.3 0.9 65 2-69 95-166 (448)
233 PF09994 DUF2235: Uncharacteri 90.3 0.68 1.5E-05 33.8 4.7 41 18-59 73-113 (277)
234 KOG2029 Uncharacterized conser 90.3 0.83 1.8E-05 36.7 5.3 47 24-71 512-571 (697)
235 PLN02209 serine carboxypeptida 90.2 1.4 2.9E-05 34.5 6.5 59 100-158 351-433 (437)
236 COG3673 Uncharacterized conser 89.5 1 2.2E-05 33.4 4.9 40 18-58 103-142 (423)
237 PLN03016 sinapoylglucose-malat 88.7 1.3 2.9E-05 34.5 5.4 39 36-74 163-212 (433)
238 KOG2521 Uncharacterized conser 87.8 7 0.00015 29.6 8.4 63 100-162 225-292 (350)
239 KOG1282 Serine carboxypeptidas 86.2 2.8 6E-05 32.9 5.8 60 101-160 364-448 (454)
240 PLN02209 serine carboxypeptida 86.1 2.9 6.2E-05 32.8 6.0 39 36-74 165-214 (437)
241 PF00450 Peptidase_S10: Serine 86.0 0.72 1.6E-05 35.5 2.7 72 2-73 92-182 (415)
242 KOG1202 Animal-type fatty acid 84.8 3.4 7.4E-05 36.6 6.0 66 3-70 2148-2217(2376)
243 PF11713 Peptidase_C80: Peptid 83.4 1.2 2.5E-05 29.6 2.4 48 3-50 61-116 (157)
244 PF10605 3HBOH: 3HB-oligomer h 81.4 1.3 2.9E-05 35.7 2.5 43 100-142 555-604 (690)
245 cd07198 Patatin Patatin-like p 81.4 2.5 5.4E-05 28.3 3.5 34 24-60 15-48 (172)
246 cd07207 Pat_ExoU_VipD_like Exo 79.8 2.7 5.9E-05 28.6 3.4 34 24-60 16-49 (194)
247 PF12242 Eno-Rase_NADH_b: NAD( 79.5 4.8 0.0001 23.1 3.6 44 17-60 18-62 (78)
248 cd07225 Pat_PNPLA6_PNPLA7 Pata 79.3 2.9 6.4E-05 31.0 3.6 33 24-59 32-64 (306)
249 PRK10279 hypothetical protein; 79.2 2.6 5.6E-05 31.2 3.2 33 24-59 22-54 (300)
250 KOG2385 Uncharacterized conser 78.5 7.4 0.00016 31.1 5.5 38 36-73 445-488 (633)
251 cd07212 Pat_PNPLA9 Patatin-lik 78.0 4.7 0.0001 30.1 4.3 37 24-60 16-54 (312)
252 cd07224 Pat_like Patatin-like 77.5 3.8 8.3E-05 29.1 3.6 36 24-60 16-51 (233)
253 KOG1282 Serine carboxypeptidas 77.3 6.8 0.00015 30.9 5.1 55 19-73 148-214 (454)
254 cd07210 Pat_hypo_W_succinogene 76.7 4.2 9E-05 28.6 3.6 34 24-60 17-50 (221)
255 COG2939 Carboxypeptidase C (ca 75.3 7.1 0.00015 31.0 4.7 56 3-58 155-218 (498)
256 cd07227 Pat_Fungal_NTE1 Fungal 74.9 4.3 9.3E-05 29.6 3.3 33 24-59 27-59 (269)
257 cd07228 Pat_NTE_like_bacteria 73.5 5.8 0.00013 26.6 3.6 34 24-60 17-50 (175)
258 PF00698 Acyl_transf_1: Acyl t 73.1 3.6 7.8E-05 30.6 2.7 28 31-60 79-106 (318)
259 cd07209 Pat_hypo_Ecoli_Z1214_l 72.3 5.5 0.00012 27.8 3.3 33 25-60 16-48 (215)
260 TIGR02816 pfaB_fam PfaB family 71.2 5.2 0.00011 32.3 3.2 27 31-59 260-286 (538)
261 COG1752 RssA Predicted esteras 70.6 5.3 0.00011 29.6 3.0 32 25-59 29-60 (306)
262 cd07205 Pat_PNPLA6_PNPLA7_NTE1 70.2 7.8 0.00017 25.9 3.6 34 24-60 17-50 (175)
263 smart00827 PKS_AT Acyl transfe 69.7 8.1 0.00017 28.3 3.8 27 31-59 77-103 (298)
264 TIGR03131 malonate_mdcH malona 69.2 7.9 0.00017 28.4 3.7 26 32-59 72-97 (295)
265 KOG4389 Acetylcholinesterase/B 68.7 13 0.00028 29.6 4.7 55 15-70 193-253 (601)
266 cd07208 Pat_hypo_Ecoli_yjju_li 67.4 8.5 0.00018 27.8 3.5 35 24-60 15-49 (266)
267 PF10081 Abhydrolase_9: Alpha/ 66.9 9.2 0.0002 28.0 3.5 35 38-72 109-147 (289)
268 TIGR00128 fabD malonyl CoA-acy 66.7 9.1 0.0002 27.9 3.6 23 38-60 83-105 (290)
269 cd07211 Pat_PNPLA8 Patatin-lik 66.1 9.7 0.00021 28.3 3.6 34 24-57 25-60 (308)
270 cd07230 Pat_TGL4-5_like Triacy 65.7 7.2 0.00016 30.5 3.0 33 25-60 91-123 (421)
271 KOG4372 Predicted alpha/beta h 63.5 3.9 8.5E-05 31.4 1.2 20 37-56 149-168 (405)
272 PF05576 Peptidase_S37: PS-10 63.1 8.1 0.00017 30.0 2.7 61 95-158 346-412 (448)
273 cd00883 beta_CA_cladeA Carboni 62.9 14 0.0003 25.2 3.6 33 21-55 66-98 (182)
274 cd00382 beta_CA Carbonic anhyd 62.4 17 0.00037 22.8 3.8 30 21-52 44-73 (119)
275 cd07232 Pat_PLPL Patain-like p 61.4 9.1 0.0002 29.8 2.8 34 24-60 84-117 (407)
276 PLN03006 carbonate dehydratase 60.9 14 0.00031 27.4 3.6 30 22-53 158-187 (301)
277 cd07218 Pat_iPLA2 Calcium-inde 60.4 16 0.00034 26.3 3.7 36 24-60 17-52 (245)
278 COG2830 Uncharacterized protei 59.2 4.8 0.0001 26.8 0.9 32 38-70 57-88 (214)
279 PF01118 Semialdhyde_dh: Semia 58.2 8.7 0.00019 24.0 1.9 31 39-69 1-32 (121)
280 cd07204 Pat_PNPLA_like Patatin 57.6 18 0.00039 25.9 3.6 36 24-60 16-53 (243)
281 PLN03014 carbonic anhydrase 56.5 16 0.00035 27.6 3.3 31 21-53 205-236 (347)
282 cd07220 Pat_PNPLA2 Patatin-lik 56.5 18 0.00038 26.1 3.4 36 24-60 21-58 (249)
283 PF07643 DUF1598: Protein of u 56.5 29 0.00062 20.3 3.6 37 21-59 28-64 (84)
284 cd07229 Pat_TGL3_like Triacylg 56.2 16 0.00034 28.3 3.3 22 38-59 111-132 (391)
285 PLN03019 carbonic anhydrase 55.9 16 0.00034 27.5 3.1 31 21-53 200-230 (330)
286 PF14253 AbiH: Bacteriophage a 55.5 7.7 0.00017 28.0 1.5 16 36-51 233-248 (270)
287 KOG4388 Hormone-sensitive lipa 55.1 14 0.00031 30.2 2.9 53 18-70 446-506 (880)
288 cd01819 Patatin_and_cPLA2 Pata 55.0 20 0.00044 23.5 3.4 31 25-56 16-46 (155)
289 cd07221 Pat_PNPLA3 Patatin-lik 54.8 22 0.00047 25.7 3.7 36 24-60 17-54 (252)
290 PLN00416 carbonate dehydratase 54.8 22 0.00048 25.8 3.7 33 21-55 125-157 (258)
291 cd00884 beta_CA_cladeB Carboni 54.6 23 0.0005 24.4 3.6 32 22-55 73-104 (190)
292 COG2230 Cfa Cyclopropane fatty 54.5 54 0.0012 24.2 5.6 48 20-68 55-104 (283)
293 cd07231 Pat_SDP1-like Sugar-De 53.9 18 0.00039 27.2 3.1 32 25-59 86-117 (323)
294 cd07206 Pat_TGL3-4-5_SDP1 Tria 53.6 18 0.00039 26.8 3.1 32 25-59 87-118 (298)
295 PF04260 DUF436: Protein of un 53.6 24 0.00052 23.6 3.4 27 21-47 2-28 (172)
296 PRK15219 carbonic anhydrase; P 53.4 26 0.00056 25.2 3.8 34 20-55 127-160 (245)
297 PRK13690 hypothetical protein; 53.0 34 0.00074 23.2 4.0 30 18-47 6-35 (184)
298 COG0331 FabD (acyl-carrier-pro 52.9 17 0.00037 27.1 3.0 22 37-58 84-105 (310)
299 PLN02154 carbonic anhydrase 51.1 29 0.00063 25.6 3.8 33 21-55 151-183 (290)
300 PF01734 Patatin: Patatin-like 49.9 15 0.00033 24.4 2.2 23 37-59 26-48 (204)
301 cd07222 Pat_PNPLA4 Patatin-lik 49.8 23 0.00051 25.4 3.2 33 24-57 16-50 (246)
302 PF09370 TIM-br_sig_trns: TIM- 49.7 1E+02 0.0022 22.6 8.6 110 24-141 2-121 (268)
303 TIGR03607 patatin-related prot 49.5 27 0.00059 29.5 3.9 20 38-57 66-85 (739)
304 COG0288 CynT Carbonic anhydras 49.2 22 0.00049 24.8 2.9 36 20-57 76-111 (207)
305 cd07217 Pat17_PNPLA8_PNPLA9_li 49.0 15 0.00032 27.9 2.2 20 40-59 43-62 (344)
306 PF00484 Pro_CA: Carbonic anhy 48.4 52 0.0011 21.4 4.5 34 20-55 39-72 (153)
307 PRK10437 carbonic anhydrase; P 48.3 35 0.00076 24.1 3.8 33 21-55 76-108 (220)
308 TIGR02690 resist_ArsH arsenica 48.3 29 0.00062 24.5 3.3 26 21-46 108-137 (219)
309 TIGR01440 conserved hypothetic 48.2 36 0.00078 22.8 3.5 27 21-47 2-28 (172)
310 cd07213 Pat17_PNPLA8_PNPLA9_li 47.1 15 0.00033 26.9 2.0 36 24-59 19-55 (288)
311 COG3007 Uncharacterized paraqu 46.8 56 0.0012 24.4 4.6 45 16-60 18-64 (398)
312 COG0218 Predicted GTPase [Gene 46.8 24 0.00052 24.5 2.7 26 93-118 128-153 (200)
313 PRK02929 L-arabinose isomerase 46.7 1.6E+02 0.0034 23.9 8.3 79 61-160 72-167 (499)
314 KOG4287 Pectin acetylesterase 45.0 6.2 0.00013 29.8 -0.3 34 22-55 160-193 (402)
315 cd03379 beta_CA_cladeD Carboni 44.6 41 0.00088 21.8 3.5 28 21-50 41-68 (142)
316 PF02610 Arabinose_Isome: L-ar 43.9 1.5E+02 0.0032 22.9 7.8 61 94-161 91-168 (359)
317 KOG1578 Predicted carbonic anh 42.2 19 0.00041 26.2 1.7 35 21-57 139-173 (276)
318 cd07216 Pat17_PNPLA8_PNPLA9_li 41.3 16 0.00035 27.1 1.4 17 41-57 45-61 (309)
319 cd03378 beta_CA_cladeC Carboni 40.9 61 0.0013 21.5 3.9 30 21-52 77-106 (154)
320 cd03557 L-arabinose_isomerase 40.7 2E+02 0.0042 23.3 10.8 101 39-160 41-161 (484)
321 cd07199 Pat17_PNPLA8_PNPLA9_li 39.0 20 0.00044 25.8 1.6 35 24-58 16-54 (258)
322 PLN02752 [acyl-carrier protein 39.0 47 0.001 25.1 3.6 20 40-59 126-145 (343)
323 cd07214 Pat17_isozyme_like Pat 38.4 19 0.00041 27.4 1.4 19 40-58 45-63 (349)
324 cd07215 Pat17_PNPLA8_PNPLA9_li 37.2 20 0.00044 26.9 1.4 17 41-57 43-59 (329)
325 PF05577 Peptidase_S28: Serine 36.4 59 0.0013 25.5 3.8 37 101-141 377-413 (434)
326 COG3887 Predicted signaling pr 36.1 79 0.0017 26.1 4.3 46 21-70 325-376 (655)
327 PF10561 UPF0565: Uncharacteri 35.9 48 0.001 24.7 3.0 24 36-59 191-214 (303)
328 cd07219 Pat_PNPLA1 Patatin-lik 35.7 47 0.001 25.7 3.0 19 40-58 46-64 (382)
329 KOG3179 Predicted glutamine sy 35.2 1.6E+02 0.0035 20.8 5.8 118 19-151 76-196 (245)
330 KOG1283 Serine carboxypeptidas 35.0 1E+02 0.0022 23.5 4.5 42 34-75 118-169 (414)
331 PF08484 Methyltransf_14: C-me 34.9 1E+02 0.0022 20.6 4.2 37 36-72 67-104 (160)
332 PRK13938 phosphoheptose isomer 34.0 1.2E+02 0.0026 21.0 4.6 38 21-59 30-67 (196)
333 KOG2214 Predicted esterase of 33.0 32 0.0007 27.5 1.8 25 36-60 200-224 (543)
334 PRK04148 hypothetical protein; 32.7 1.4E+02 0.0031 19.3 4.8 34 25-58 4-38 (134)
335 PRK10886 DnaA initiator-associ 32.3 1.2E+02 0.0027 20.9 4.5 38 20-58 25-62 (196)
336 PF13580 SIS_2: SIS domain; PD 31.4 1.1E+02 0.0024 19.5 3.9 39 20-59 19-57 (138)
337 COG4475 Uncharacterized protei 31.4 1.1E+02 0.0025 20.3 3.8 32 18-49 4-35 (180)
338 PRK05368 homoserine O-succinyl 30.6 1.1E+02 0.0024 22.9 4.2 36 17-58 119-154 (302)
339 PRK13936 phosphoheptose isomer 30.2 1.4E+02 0.0029 20.6 4.4 38 21-59 28-65 (197)
340 PLN02733 phosphatidylcholine-s 30.1 42 0.00091 26.6 2.1 52 104-159 370-421 (440)
341 PF05116 S6PP: Sucrose-6F-phos 29.8 61 0.0013 23.2 2.8 25 23-47 167-191 (247)
342 PRK00414 gmhA phosphoheptose i 29.6 1.3E+02 0.0028 20.7 4.2 37 20-57 28-64 (192)
343 PLN02994 1-aminocyclopropane-1 27.6 1.4E+02 0.0031 19.7 4.0 51 21-72 97-151 (153)
344 PRK14194 bifunctional 5,10-met 27.2 1.2E+02 0.0026 22.7 3.9 31 29-59 149-183 (301)
345 PF01494 FAD_binding_3: FAD bi 26.8 72 0.0016 23.6 2.8 22 39-60 3-24 (356)
346 COG0373 HemA Glutamyl-tRNA red 26.8 1.7E+02 0.0037 23.1 4.7 47 21-69 161-209 (414)
347 COG0431 Predicted flavoprotein 26.8 96 0.0021 21.1 3.2 34 21-55 85-118 (184)
348 PF00691 OmpA: OmpA family; I 26.0 1.4E+02 0.0031 17.3 3.5 25 21-46 55-79 (97)
349 PF03575 Peptidase_S51: Peptid 26.0 43 0.00093 21.9 1.3 12 40-51 70-81 (154)
350 PF01187 MIF: Macrophage migra 25.7 1E+02 0.0022 19.1 2.9 26 21-46 75-100 (114)
351 COG2453 CDC14 Predicted protei 25.6 1.3E+02 0.0028 20.4 3.6 27 20-49 89-115 (180)
352 PF13242 Hydrolase_like: HAD-h 25.2 1.3E+02 0.0029 16.6 3.9 45 25-73 9-54 (75)
353 cd03131 GATase1_HTS Type 1 glu 25.2 39 0.00085 22.9 1.0 37 17-59 82-118 (175)
354 COG0421 SpeE Spermidine syntha 25.1 98 0.0021 22.9 3.1 32 36-69 76-107 (282)
355 COG2201 CheB Chemotaxis respon 24.7 1E+02 0.0022 23.7 3.1 27 37-63 156-184 (350)
356 PF09949 DUF2183: Uncharacteri 24.5 1.7E+02 0.0038 17.7 6.7 40 25-66 54-96 (100)
357 PTZ00450 macrophage migration 24.3 1.1E+02 0.0023 19.1 2.8 25 22-46 78-102 (113)
358 TIGR03127 RuMP_HxlB 6-phospho 23.8 1.5E+02 0.0033 19.7 3.8 34 21-59 19-52 (179)
359 cd06583 PGRP Peptidoglycan rec 23.6 1.8E+02 0.0038 17.8 3.8 32 17-49 86-117 (126)
360 PF07640 QPP: QPP; InterPro: 23.4 52 0.0011 15.8 0.9 11 180-190 5-15 (36)
361 COG0084 TatD Mg-dependent DNas 23.4 2.4E+02 0.0052 20.6 4.8 52 18-72 15-67 (256)
362 cd05006 SIS_GmhA Phosphoheptos 22.9 2.2E+02 0.0048 19.0 4.4 39 19-58 16-54 (177)
363 COG4667 Predicted esterase of 22.7 98 0.0021 22.8 2.6 35 24-60 28-62 (292)
364 PTZ00397 macrophage migration 22.6 1.5E+02 0.0033 18.2 3.3 23 21-43 77-99 (116)
365 TIGR02813 omega_3_PfaA polyket 22.6 1E+02 0.0023 30.6 3.4 26 31-58 669-694 (2582)
366 PF14987 NADHdh_A3: NADH dehyd 22.3 1.7E+02 0.0038 16.9 3.1 26 24-51 4-29 (84)
367 PF13419 HAD_2: Haloacid dehal 22.1 1.6E+02 0.0035 18.9 3.6 32 24-55 137-168 (176)
368 cd05007 SIS_Etherase N-acetylm 22.0 1.9E+02 0.0042 20.9 4.1 38 21-59 34-71 (257)
369 cd02013 TPP_Xsc_like Thiamine 21.9 1E+02 0.0022 21.2 2.6 19 96-114 93-111 (196)
370 KOG1532 GTPase XAB1, interacts 21.6 3.6E+02 0.0078 20.3 7.9 94 21-122 101-202 (366)
371 cd02015 TPP_AHAS Thiamine pyro 21.4 1.3E+02 0.0028 20.3 3.0 18 96-113 90-107 (186)
372 cd08757 SAM_PNT_ESE Sterile al 21.2 1.6E+02 0.0034 16.4 2.8 37 19-55 7-43 (68)
373 PRK03482 phosphoglycerate muta 21.2 2.5E+02 0.0055 19.4 4.5 17 38-56 143-159 (215)
374 TIGR01491 HAD-SF-IB-PSPlk HAD- 21.1 1.2E+02 0.0026 20.4 2.9 34 24-57 150-183 (201)
375 PF14714 KH_dom-like: KH-domai 21.1 1.8E+02 0.0039 16.7 3.1 29 99-127 37-65 (80)
376 PF13059 DUF3922: Protein of u 20.9 1.7E+02 0.0036 16.2 3.6 26 19-44 9-34 (79)
377 cd05005 SIS_PHI Hexulose-6-pho 20.8 2.3E+02 0.0049 19.0 4.1 85 21-112 22-114 (179)
378 PF01339 CheB_methylest: CheB 20.6 1E+02 0.0022 21.0 2.3 19 40-58 1-19 (182)
379 cd02006 TPP_Gcl Thiamine pyrop 20.5 1.1E+02 0.0024 21.0 2.6 20 95-114 96-115 (202)
380 TIGR01549 HAD-SF-IA-v1 haloaci 20.4 1.8E+02 0.0039 18.6 3.5 29 24-53 122-150 (154)
381 cd01080 NAD_bind_m-THF_DH_Cycl 20.2 2.1E+02 0.0045 19.2 3.7 38 22-59 28-67 (168)
No 1
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.97 E-value=5.3e-30 Score=175.19 Aligned_cols=160 Identities=57% Similarity=1.045 Sum_probs=148.8
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhc
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCH 80 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~ 80 (190)
|||+|+|.|.+.+.+.+.++|+.++.+++++.+| +.++++++|+|+|...++.+|.+.| +.++|+.+|+.++++.+..
T Consensus 94 ~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~-~~alVL~SPf~S~~rv~~~ 171 (258)
T KOG1552|consen 94 YDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP-LAAVVLHSPFTSGMRVAFP 171 (258)
T ss_pred EecccccccCCCcccccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC-cceEEEeccchhhhhhhcc
Confidence 6999999999999999999999999999999998 7799999999999999999999999 9999999999999998877
Q ss_pred -cccccchhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHHH
Q 035673 81 -VKFTFCCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQE 159 (190)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~ 159 (190)
....++.+.+...+.++.++||++++||++|.+++..+..++++..+...+..++.|+||...+..+++.+.+..|+..
T Consensus 172 ~~~~~~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 172 DTKTTYCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISS 251 (258)
T ss_pred CcceEEeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHH
Confidence 4444778888888999999999999999999999999999999999988888999999999999999999999999987
Q ss_pred hhc
Q 035673 160 MEN 162 (190)
Q Consensus 160 ~~~ 162 (190)
...
T Consensus 252 ~~~ 254 (258)
T KOG1552|consen 252 VLP 254 (258)
T ss_pred hcc
Confidence 653
No 2
>PHA02857 monoglyceride lipase; Provisional
Probab=99.90 E-value=7.5e-23 Score=147.58 Aligned_cols=158 Identities=20% Similarity=0.245 Sum_probs=111.4
Q ss_pred CCCCCCCCCCCCCCC-C---chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh
Q 035673 1 YDYSGYGASTGKPSE-S---NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL 75 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~-~---~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~ 75 (190)
+|+||||.|++.... . .+.+|+.+.++.+++.+ ...+++++||||||.+++.++..+| .++++|+++|+....
T Consensus 58 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~ 135 (276)
T PHA02857 58 HDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAE 135 (276)
T ss_pred ccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccc
Confidence 699999999764322 1 23456666666665554 3468999999999999999999998 799999999864311
Q ss_pred h------------h-hhccc------cc-----------cchh---------------hh----cchhhhhcCCCceEEE
Q 035673 76 R------------V-LCHVK------FT-----------FCCD---------------IY----KNINKIKKVKCPVLVI 106 (190)
Q Consensus 76 ~------------~-~~~~~------~~-----------~~~~---------------~~----~~~~~~~~~~~P~l~i 106 (190)
. . ..... .. ...+ .. .....+.++++|++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv 215 (276)
T PHA02857 136 AVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILIL 215 (276)
T ss_pred cccHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEE
Confidence 0 0 00000 00 0000 00 0123456789999999
Q ss_pred EcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh----HHHHHHHHHHHHh
Q 035673 107 HGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP----DYIRHLCRFIQEM 160 (190)
Q Consensus 107 ~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~----~~~~~i~~~l~~~ 160 (190)
+|++|.++|++.++++.+.+....++.+++++||....+.+ ++++.+.+||++.
T Consensus 216 ~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 216 QGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred ecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999999999887655688999999998765543 5778888998874
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.90 E-value=4.2e-23 Score=153.44 Aligned_cols=161 Identities=20% Similarity=0.328 Sum_probs=110.6
Q ss_pred CCCCCCCCCCCCCCC----CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh
Q 035673 1 YDYSGYGASTGKPSE----SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL 75 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~ 75 (190)
+|+||||.|++.... ..+.+|+.++++.+......+..+++|+||||||.+++.++..+| +++++|+++|+....
T Consensus 121 ~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~ 200 (349)
T PLN02385 121 MDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIA 200 (349)
T ss_pred ecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccc
Confidence 699999999864322 233455666666554432234458999999999999999999999 899999999853210
Q ss_pred h---------h----hh----------cccc-c--c--------------ch----------hhh----cchhhhhcCCC
Q 035673 76 R---------V----LC----------HVKF-T--F--------------CC----------DIY----KNINKIKKVKC 101 (190)
Q Consensus 76 ~---------~----~~----------~~~~-~--~--------------~~----------~~~----~~~~~~~~~~~ 101 (190)
. . .. .... . + .. ..+ .....+.++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~ 280 (349)
T PLN02385 201 DDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSL 280 (349)
T ss_pred ccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCC
Confidence 0 0 00 0000 0 0 00 000 11124567899
Q ss_pred ceEEEEcCCCceeechhHHHHHHHhCC-CCceEEecCCCcCCCCChh-H----HHHHHHHHHHHhh
Q 035673 102 PVLVIHGTEDDVVNWLHGNKLWKMARD-PYEPLWIKGGGHCNLELYP-D----YIRHLCRFIQEME 161 (190)
Q Consensus 102 P~l~i~g~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~-~----~~~~i~~~l~~~~ 161 (190)
|+|+++|++|.++++..++.+++.+.. ..++++++++||..+.+.+ + +.+.|.+||+++.
T Consensus 281 P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 281 PLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred CEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 999999999999999999999988753 3588999999998765444 3 6688899998764
No 4
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=1.3e-22 Score=149.77 Aligned_cols=163 Identities=21% Similarity=0.218 Sum_probs=114.1
Q ss_pred CCCCCCCCCCCCCCC----CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh
Q 035673 1 YDYSGYGASTGKPSE----SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL 75 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~ 75 (190)
+|+||||.|++.... ....+|+.++++++......+..+++|+||||||.+++.++..+| +|+++|+++|+....
T Consensus 93 ~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 93 LDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKIS 172 (330)
T ss_pred ecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCC
Confidence 699999999753221 234568888888887653333457999999999999999999999 799999999853210
Q ss_pred h---------h---hh-c--cc------cccch--------------h--hh-------------c----chhhhhcCCC
Q 035673 76 R---------V---LC-H--VK------FTFCC--------------D--IY-------------K----NINKIKKVKC 101 (190)
Q Consensus 76 ~---------~---~~-~--~~------~~~~~--------------~--~~-------------~----~~~~~~~~~~ 101 (190)
. . .. . .. ..... + .+ . ....+.++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 252 (330)
T PLN02298 173 DKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSI 252 (330)
T ss_pred cccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCC
Confidence 0 0 00 0 00 00000 0 00 0 1123567899
Q ss_pred ceEEEEcCCCceeechhHHHHHHHhCC-CCceEEecCCCcCCCCChh-----HHHHHHHHHHHHhhcc
Q 035673 102 PVLVIHGTEDDVVNWLHGNKLWKMARD-PYEPLWIKGGGHCNLELYP-----DYIRHLCRFIQEMENM 163 (190)
Q Consensus 102 P~l~i~g~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~-----~~~~~i~~~l~~~~~~ 163 (190)
|+|+++|++|.++|++.++++++.++. ..+++++++++|..+.+.+ ++.+.+.+||.+....
T Consensus 253 PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 253 PFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred CEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999988763 3688899999998764332 3667888999887643
No 5
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.89 E-value=5.1e-22 Score=143.55 Aligned_cols=155 Identities=21% Similarity=0.236 Sum_probs=105.1
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh-----
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG----- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~----- 74 (190)
+|+||||.|+.............+.+..+.+.+ +.++++++||||||.+++.++.++| +++++|+++|....
T Consensus 66 ~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 143 (282)
T TIGR03343 66 KDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL--DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFA 143 (282)
T ss_pred ECCCCCCCCCCCcCcccccchhHHHHHHHHHHc--CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccc
Confidence 699999999864322111111222233344444 4479999999999999999999999 89999998863110
Q ss_pred ------hhhhh---------------c-c--cc-c--------cc---------------------hhhhcchhhhhcCC
Q 035673 75 ------LRVLC---------------H-V--KF-T--------FC---------------------CDIYKNINKIKKVK 100 (190)
Q Consensus 75 ------~~~~~---------------~-~--~~-~--------~~---------------------~~~~~~~~~~~~~~ 100 (190)
..... . . .. . .. ...++....+++++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 223 (282)
T TIGR03343 144 PMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIK 223 (282)
T ss_pred cCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCC
Confidence 00000 0 0 00 0 00 00001123456789
Q ss_pred CceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHH
Q 035673 101 CPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQ 158 (190)
Q Consensus 101 ~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~ 158 (190)
+|+++++|++|.+++.+.++++.+.+++ .++++++++||+.+.+.++ +.+.|.+||.
T Consensus 224 ~Pvlli~G~~D~~v~~~~~~~~~~~~~~-~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 224 AKTLVTWGRDDRFVPLDHGLKLLWNMPD-AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCEEEEEccCCCcCCchhHHHHHHhCCC-CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 9999999999999999999999888875 4889999999998766664 6799999985
No 6
>PLN02965 Probable pheophorbidase
Probab=99.89 E-value=7e-22 Score=141.00 Aligned_cols=158 Identities=13% Similarity=0.204 Sum_probs=107.1
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcc---h---
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGIL---S--- 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~---~--- 73 (190)
+|+||||.|+.........+++.+.+..+.+.++. .++++++||||||.+++.++.++| +|+++|++++.. .
T Consensus 36 ~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 114 (255)
T PLN02965 36 VDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP-DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSII 114 (255)
T ss_pred ecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC-CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCc
Confidence 69999999975433223344444444444444432 148999999999999999999998 999999988641 1
Q ss_pred --hhhh-hhc--------------cc-------cccc----hhhh------------cc------------hhhhhcCCC
Q 035673 74 --GLRV-LCH--------------VK-------FTFC----CDIY------------KN------------INKIKKVKC 101 (190)
Q Consensus 74 --~~~~-~~~--------------~~-------~~~~----~~~~------------~~------------~~~~~~~~~ 101 (190)
.... ... .. .... .... .. ...+..+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 194 (255)
T PLN02965 115 SPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKV 194 (255)
T ss_pred cHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCC
Confidence 0000 000 00 0000 0000 00 012335889
Q ss_pred ceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHHHHh
Q 035673 102 PVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFIQEM 160 (190)
Q Consensus 102 P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~~ 160 (190)
|+++++|++|.++|+...+.+.+.+++. ++++++++||+.+.+.+ ++.+.|.+|++..
T Consensus 195 P~lvi~g~~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 195 PRVYIKTAKDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CEEEEEcCCCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999888875 78889999999766655 5779999998764
No 7
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.89 E-value=3.3e-23 Score=138.03 Aligned_cols=162 Identities=25% Similarity=0.416 Sum_probs=136.5
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhh
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLC 79 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~ 79 (190)
+++||+|.|++.+.+.+..-|.+++++++..+...+..++++.|.|.||.+|+.+|+... ++.++++-+.|.+-.....
T Consensus 112 vsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i 191 (300)
T KOG4391|consen 112 VSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAI 191 (300)
T ss_pred EEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhh
Confidence 379999999999999999999999999999998888899999999999999999999987 8999999888776433222
Q ss_pred ccc---------cccchhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCC-CceEEecCCCcCCCCChhHH
Q 035673 80 HVK---------FTFCCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDP-YEPLWIKGGGHCNLELYPDY 149 (190)
Q Consensus 80 ~~~---------~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~ 149 (190)
..- .....+.+.....++..++|.|++.|..|.+||+.+.+.+++.++.. +++..||++.|+.....+.+
T Consensus 192 ~~v~p~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGY 271 (300)
T KOG4391|consen 192 PLVFPFPMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGY 271 (300)
T ss_pred heeccchhhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccH
Confidence 111 11222355666677778899999999999999999999999988865 67889999999987777889
Q ss_pred HHHHHHHHHHhhc
Q 035673 150 IRHLCRFIQEMEN 162 (190)
Q Consensus 150 ~~~i~~~l~~~~~ 162 (190)
++.|.+||.+...
T Consensus 272 fq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 272 FQAIEDFLAEVVK 284 (300)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999988754
No 8
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=5e-22 Score=144.53 Aligned_cols=156 Identities=24% Similarity=0.283 Sum_probs=107.0
Q ss_pred CCCCCCCCCCCCCC------CCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch
Q 035673 1 YDYSGYGASTGKPS------ESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~ 73 (190)
+|+||||.|+.... .....++..+.+..+.+++++ ++++++||||||.+++.++.++| +|+++|++++...
T Consensus 61 ~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~ 138 (294)
T PLN02824 61 IDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVG--DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLR 138 (294)
T ss_pred EcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcC--CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcc
Confidence 69999999985421 123344555555555555544 78999999999999999999999 9999999986431
Q ss_pred hh---------h-------hhhcc------------------c-----c----cc--------------------chhhh
Q 035673 74 GL---------R-------VLCHV------------------K-----F----TF--------------------CCDIY 90 (190)
Q Consensus 74 ~~---------~-------~~~~~------------------~-----~----~~--------------------~~~~~ 90 (190)
.. . ..... . + .. .....
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (294)
T PLN02824 139 GLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFI 218 (294)
T ss_pred cccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHh
Confidence 10 0 00000 0 0 00 00000
Q ss_pred ------cchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHHHH
Q 035673 91 ------KNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFIQE 159 (190)
Q Consensus 91 ------~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~ 159 (190)
.....+.++++|+++++|++|.+++.+.++.+.+..+. .++++++++||+.+.+.+ ++.+.|.+|+++
T Consensus 219 ~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 219 SYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 01234567899999999999999999888886665543 488999999999766665 477999999975
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.87 E-value=1.4e-21 Score=138.95 Aligned_cols=155 Identities=23% Similarity=0.351 Sum_probs=106.5
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhh---
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLR--- 76 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~--- 76 (190)
+|+||||.|..........++..+.+..+.+.++ .++++++||||||.+++.++..+| .++++|+++++.....
T Consensus 45 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~ 122 (257)
T TIGR03611 45 YDHRGTGRSPGELPPGYSIAHMADDVLQLLDALN--IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR 122 (257)
T ss_pred EcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC--CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH
Confidence 6999999998654333334444334444444554 478999999999999999999998 8999999887432100
Q ss_pred ----h----hhcc---c---------c--ccc------------------------h------hhhcchhhhhcCCCceE
Q 035673 77 ----V----LCHV---K---------F--TFC------------------------C------DIYKNINKIKKVKCPVL 104 (190)
Q Consensus 77 ----~----~~~~---~---------~--~~~------------------------~------~~~~~~~~~~~~~~P~l 104 (190)
. .... . + .+. . ..++....+.++++|++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 202 (257)
T TIGR03611 123 RCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVL 202 (257)
T ss_pred HHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEE
Confidence 0 0000 0 0 000 0 00111234567899999
Q ss_pred EEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHHH
Q 035673 105 VIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFIQ 158 (190)
Q Consensus 105 ~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~ 158 (190)
+++|++|.++|++.++++.+.+++. ++++++++||+...+.+ ++.+.+.+||+
T Consensus 203 ~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 203 LIANRDDMLVPYTQSLRLAAALPNA-QLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred EEecCcCcccCHHHHHHHHHhcCCc-eEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 9999999999999999998887664 78889999998665554 57799999985
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.87 E-value=1.4e-21 Score=140.97 Aligned_cols=156 Identities=18% Similarity=0.274 Sum_probs=109.0
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh----
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL---- 75 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~---- 75 (190)
+|+||||.|+.... ....+++.+.+..+.+.+++ ++++++||||||.+++.+|.++| +++++|++++.....
T Consensus 57 ~Dl~G~G~S~~~~~-~~~~~~~~~~~~~~i~~l~~--~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 133 (276)
T TIGR02240 57 FDVPGVGGSSTPRH-PYRFPGLAKLAARMLDYLDY--GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPG 133 (276)
T ss_pred ECCCCCCCCCCCCC-cCcHHHHHHHHHHHHHHhCc--CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCC
Confidence 69999999975432 23344544555555555544 78999999999999999999999 899999998753210
Q ss_pred --hh---hhc------c-------------cccc--------------------chh-----hhcchhhhhcCCCceEEE
Q 035673 76 --RV---LCH------V-------------KFTF--------------------CCD-----IYKNINKIKKVKCPVLVI 106 (190)
Q Consensus 76 --~~---~~~------~-------------~~~~--------------------~~~-----~~~~~~~~~~~~~P~l~i 106 (190)
.. ... . .... ... .......++++++|++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 213 (276)
T TIGR02240 134 KPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVL 213 (276)
T ss_pred chhHHHHhcCchhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEE
Confidence 00 000 0 0000 000 000113357889999999
Q ss_pred EcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHHHHhh
Q 035673 107 HGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFIQEME 161 (190)
Q Consensus 107 ~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~~~ 161 (190)
+|++|++++++..+++.+.++.. +++++++ ||+.+.+.+ ++.+.|.+|+++..
T Consensus 214 ~G~~D~~v~~~~~~~l~~~~~~~-~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 214 AGDDDPIIPLINMRLLAWRIPNA-ELHIIDD-GHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred EeCCCCcCCHHHHHHHHHhCCCC-EEEEEcC-CCchhhccHHHHHHHHHHHHHHhh
Confidence 99999999999999998888764 7888875 998766655 58899999998764
No 11
>PRK13604 luxD acyl transferase; Provisional
Probab=99.87 E-value=7.4e-21 Score=136.00 Aligned_cols=140 Identities=21% Similarity=0.228 Sum_probs=103.3
Q ss_pred CCCCCC-CCCCCCCCC---CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhh
Q 035673 1 YDYSGY-GASTGKPSE---SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLR 76 (190)
Q Consensus 1 ~D~~G~-G~s~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~ 76 (190)
||+||+ |.|++.... .....|+..+++|+++. +.++++++||||||.+++.+|... +++++|+.||+.+...
T Consensus 70 fD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~~-~v~~lI~~sp~~~l~d 145 (307)
T PRK13604 70 YDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINEI-DLSFLITAVGVVNLRD 145 (307)
T ss_pred ecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcCC-CCCEEEEcCCcccHHH
Confidence 799988 999876532 23467999999999886 347899999999999997777654 4999999999877332
Q ss_pred hhh---cc-------------------cc---ccchhh--------hcchhhhhcCCCceEEEEcCCCceeechhHHHHH
Q 035673 77 VLC---HV-------------------KF---TFCCDI--------YKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLW 123 (190)
Q Consensus 77 ~~~---~~-------------------~~---~~~~~~--------~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~ 123 (190)
.+. .. .+ .+..+. ..+...++++++|+|+|||++|.+||.+.++.++
T Consensus 146 ~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~ 225 (307)
T PRK13604 146 TLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLL 225 (307)
T ss_pred HHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHH
Confidence 111 00 00 011110 1112446678899999999999999999999999
Q ss_pred HHhC-CCCceEEecCCCcCCCC
Q 035673 124 KMAR-DPYEPLWIKGGGHCNLE 144 (190)
Q Consensus 124 ~~~~-~~~~~~~~~~~~H~~~~ 144 (190)
+.++ .++++++++|++|.+.+
T Consensus 226 e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 226 DSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHhccCCcEEEEeCCCccccCc
Confidence 9886 46789999999996654
No 12
>PRK10749 lysophospholipase L2; Provisional
Probab=99.87 E-value=2.6e-21 Score=142.85 Aligned_cols=158 Identities=16% Similarity=0.186 Sum_probs=105.9
Q ss_pred CCCCCCCCCCCCCCC---------CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCC
Q 035673 1 YDYSGYGASTGKPSE---------SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSG 70 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~---------~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~ 70 (190)
+|+||||.|++.... ..+.+|+..+++.+.+.. +..+++++||||||.+++.++..+| .++++|+++|
T Consensus 87 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p 164 (330)
T PRK10749 87 IDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAP 164 (330)
T ss_pred EcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECc
Confidence 699999999753211 123345555555544433 3478999999999999999999999 8999999998
Q ss_pred cchhh--------h----hhhcc---------------cccc------------------c----------------hhh
Q 035673 71 ILSGL--------R----VLCHV---------------KFTF------------------C----------------CDI 89 (190)
Q Consensus 71 ~~~~~--------~----~~~~~---------------~~~~------------------~----------------~~~ 89 (190)
..... . ..... .... . ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (330)
T PRK10749 165 MFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRES 244 (330)
T ss_pred hhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHH
Confidence 54210 0 00000 0000 0 000
Q ss_pred h----cchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCC------CCceEEecCCCcCCCCCh----hHHHHHHHH
Q 035673 90 Y----KNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARD------PYEPLWIKGGGHCNLELY----PDYIRHLCR 155 (190)
Q Consensus 90 ~----~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~------~~~~~~~~~~~H~~~~~~----~~~~~~i~~ 155 (190)
. .....+.++++|+|+++|++|.+++++.++.+++.++. ..+++++++++|..+.+. +++++.|.+
T Consensus 245 ~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~ 324 (330)
T PRK10749 245 ILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVD 324 (330)
T ss_pred HHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHH
Confidence 0 00123456889999999999999999998888887642 246899999999876544 347788888
Q ss_pred HHHHh
Q 035673 156 FIQEM 160 (190)
Q Consensus 156 ~l~~~ 160 (190)
||++.
T Consensus 325 fl~~~ 329 (330)
T PRK10749 325 FFNRH 329 (330)
T ss_pred HHhhc
Confidence 98753
No 13
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.87 E-value=1.2e-21 Score=137.07 Aligned_cols=160 Identities=19% Similarity=0.252 Sum_probs=115.7
Q ss_pred CCCCCCCCCCCCCCC----CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh
Q 035673 1 YDYSGYGASTGKPSE----SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL 75 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~ 75 (190)
+|++|||.|++-... ...++|+...++.++..-.....+.+++||||||.+++.++.++| ..+++|+++|+....
T Consensus 88 ~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 88 IDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKIS 167 (313)
T ss_pred eeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccC
Confidence 599999999976443 345567777777766665545679999999999999999999998 889999999853210
Q ss_pred hhh--------------------h------------------------------ccccccchhh----hcchhhhhcCCC
Q 035673 76 RVL--------------------C------------------------------HVKFTFCCDI----YKNINKIKKVKC 101 (190)
Q Consensus 76 ~~~--------------------~------------------------------~~~~~~~~~~----~~~~~~~~~~~~ 101 (190)
... . ..+.....+. .+....+.++.+
T Consensus 168 ~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtv 247 (313)
T KOG1455|consen 168 EDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTV 247 (313)
T ss_pred CccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccc
Confidence 000 0 0000001111 112346778899
Q ss_pred ceEEEEcCCCceeechhHHHHHHHhCCC-CceEEecCCCcCCCC-Chh----HHHHHHHHHHHHh
Q 035673 102 PVLVIHGTEDDVVNWLHGNKLWKMARDP-YEPLWIKGGGHCNLE-LYP----DYIRHLCRFIQEM 160 (190)
Q Consensus 102 P~l~i~g~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~-~~~----~~~~~i~~~l~~~ 160 (190)
|.+++||++|.++.+..++.+++..... +++.+|||.=|..+. +.+ .++..|.+||++.
T Consensus 248 PflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 248 PFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999999999999987754 789999999997653 222 3668889998753
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.87 E-value=5.6e-21 Score=137.63 Aligned_cols=155 Identities=20% Similarity=0.192 Sum_probs=106.0
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhh---
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLR--- 76 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~--- 76 (190)
+|+||||.|+.........++..+.+..+.+.+++ ++++++||||||.+++.++..+| ++++++++++......
T Consensus 60 ~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~ 137 (278)
T TIGR03056 60 PDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGL--SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMA 137 (278)
T ss_pred ecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCC--CCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccc
Confidence 69999999986544233455555555555566644 78999999999999999999999 7898988876322100
Q ss_pred ---------hh-------------hcc--cc----------------ccchhhhc-------------------chhhhh
Q 035673 77 ---------VL-------------CHV--KF----------------TFCCDIYK-------------------NINKIK 97 (190)
Q Consensus 77 ---------~~-------------~~~--~~----------------~~~~~~~~-------------------~~~~~~ 97 (190)
.. ... .. ........ ....+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (278)
T TIGR03056 138 GTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLP 217 (278)
T ss_pred ccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcc
Confidence 00 000 00 00000000 012345
Q ss_pred cCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCCh-hHHHHHHHHHHH
Q 035673 98 KVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELY-PDYIRHLCRFIQ 158 (190)
Q Consensus 98 ~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~~l~ 158 (190)
++++|+++++|++|.++|.+..+.+.+.+++. ++++++++||+.+.+. +++.+.|.+|++
T Consensus 218 ~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 218 RITIPLHLIAGEEDKAVPPDESKRAATRVPTA-TLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cCCCCEEEEEeCCCcccCHHHHHHHHHhccCC-eEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 67899999999999999999888888777654 7888999999876554 457799999873
No 15
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.86 E-value=1.1e-21 Score=136.40 Aligned_cols=146 Identities=23% Similarity=0.309 Sum_probs=109.8
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhcc------c-------
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHV------K------- 82 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~------~------- 82 (190)
...+|+.++++++.++..+|++++.|+|+|+||.+++.++..+| .+++++..+|+.+........ .
T Consensus 43 ~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~ 122 (213)
T PF00326_consen 43 ADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDP 122 (213)
T ss_dssp HHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSST
T ss_pred cchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeeeeccceecchhcccccccccccccccccCcc
Confidence 45779999999999998889999999999999999999999888 899999999876533222110 0
Q ss_pred --cccchhhhcchhhhhc--CCCceEEEEcCCCceeechhHHHHHHHhCC---CCceEEecCCCcCCCCC--hhHHHHHH
Q 035673 83 --FTFCCDIYKNINKIKK--VKCPVLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWIKGGGHCNLEL--YPDYIRHL 153 (190)
Q Consensus 83 --~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~--~~~~~~~i 153 (190)
....+....+...+.+ +++|+|++||++|..||+.++..+++.+.. +.+++++|+++|..... ..++.+.+
T Consensus 123 ~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~ 202 (213)
T PF00326_consen 123 WDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERI 202 (213)
T ss_dssp TTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHH
T ss_pred chhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHH
Confidence 0001112233445556 789999999999999999999999887654 35788899999965432 23577999
Q ss_pred HHHHHHhhc
Q 035673 154 CRFIQEMEN 162 (190)
Q Consensus 154 ~~~l~~~~~ 162 (190)
.+|++++++
T Consensus 203 ~~f~~~~l~ 211 (213)
T PF00326_consen 203 LDFFDKYLK 211 (213)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999998865
No 16
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=7.2e-21 Score=138.52 Aligned_cols=158 Identities=19% Similarity=0.275 Sum_probs=105.5
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh-----
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG----- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~----- 74 (190)
+|+||||.|+..... ...++..+.+..+.+.+++ ++++++||||||.+++.++.++| +|+++|+++++...
T Consensus 59 ~D~~G~G~S~~~~~~-~~~~~~a~dl~~ll~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~ 135 (295)
T PRK03592 59 PDLIGMGASDKPDID-YTFADHARYLDAWFDALGL--DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDD 135 (295)
T ss_pred EcCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHhCC--CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhh
Confidence 699999999865432 2344444444555555654 78999999999999999999999 89999999963210
Q ss_pred hh--------hhhccc------------cc-cchh------------hh-------------------------------
Q 035673 75 LR--------VLCHVK------------FT-FCCD------------IY------------------------------- 90 (190)
Q Consensus 75 ~~--------~~~~~~------------~~-~~~~------------~~------------------------------- 90 (190)
+. .+.... .. .... .+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (295)
T PRK03592 136 FPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVA 215 (295)
T ss_pred cchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHh
Confidence 00 000000 00 0000 00
Q ss_pred ---cchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHHHHhh
Q 035673 91 ---KNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFIQEME 161 (190)
Q Consensus 91 ---~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~~~ 161 (190)
+....+.++++|+++++|++|.++++....++........++++++++||+.+.+.+ ++.+.|.+|+++..
T Consensus 216 ~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 216 LVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred hhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 001123567999999999999999666665655443334588899999999766655 57799999998764
No 17
>PRK06489 hypothetical protein; Provisional
Probab=99.86 E-value=1.4e-20 Score=140.55 Aligned_cols=158 Identities=20% Similarity=0.260 Sum_probs=107.6
Q ss_pred CCCCCCCCCCCCCCC------CchhhhHH-HHHHHHHHHhCCCCCcEE-EEEEccChHHHHHHHhhcC-ccceeeecCCc
Q 035673 1 YDYSGYGASTGKPSE------SNTYADIE-AVYQCLQTEYGVSQEDLI-LYGQSVGSGPTLHLASKLP-RLRGVVLHSGI 71 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~------~~~~~d~~-~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~ 71 (190)
+|+||||.|+..... ....+++. .++..+.+++++ ++++ ++||||||.+|+.++.++| +|+++|++++.
T Consensus 111 ~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 111 PDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred eCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 599999999754321 12334443 445556677765 6675 8999999999999999999 99999998763
Q ss_pred chh-------hhh-----hhcc------c-----------------------------ccc------ch----h------
Q 035673 72 LSG-------LRV-----LCHV------K-----------------------------FTF------CC----D------ 88 (190)
Q Consensus 72 ~~~-------~~~-----~~~~------~-----------------------------~~~------~~----~------ 88 (190)
... ... .... . ... .. .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T PRK06489 189 PTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTAD 268 (360)
T ss_pred cccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcC
Confidence 210 000 0000 0 000 00 0
Q ss_pred ------------hhcchhhhhcCCCceEEEEcCCCceeechhH--HHHHHHhCCCCceEEecCC----CcCCCCChhHHH
Q 035673 89 ------------IYKNINKIKKVKCPVLVIHGTEDDVVNWLHG--NKLWKMARDPYEPLWIKGG----GHCNLELYPDYI 150 (190)
Q Consensus 89 ------------~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~--~~~~~~~~~~~~~~~~~~~----~H~~~~~~~~~~ 150 (190)
..+....+.++++|+|+++|++|.++|++.+ +.+.+.+++. ++++++++ ||..++.++++.
T Consensus 269 ~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a-~l~~i~~a~~~~GH~~~e~P~~~~ 347 (360)
T PRK06489 269 ANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHG-RLVLIPASPETRGHGTTGSAKFWK 347 (360)
T ss_pred HHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCC-eEEEECCCCCCCCcccccCHHHHH
Confidence 0001124567899999999999999998865 6777777765 89999986 998876555688
Q ss_pred HHHHHHHHHhh
Q 035673 151 RHLCRFIQEME 161 (190)
Q Consensus 151 ~~i~~~l~~~~ 161 (190)
+.|.+||+++.
T Consensus 348 ~~i~~FL~~~~ 358 (360)
T PRK06489 348 AYLAEFLAQVP 358 (360)
T ss_pred HHHHHHHHhcc
Confidence 99999998764
No 18
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=2.1e-20 Score=136.47 Aligned_cols=157 Identities=20% Similarity=0.169 Sum_probs=104.1
Q ss_pred CCCCCCCCCCCCCCC-CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh----
Q 035673 1 YDYSGYGASTGKPSE-SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG---- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~---- 74 (190)
+|+||||.|+..... ....++..+.+..+.+++++ ++++++||||||.+++.++..+| ++++++++++....
T Consensus 79 ~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 156 (302)
T PRK00870 79 PDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDL--TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP 156 (302)
T ss_pred ECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC--CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc
Confidence 699999999754322 22344444444444455544 78999999999999999999999 99999998863110
Q ss_pred ----hhhhhc----------------c---c-----cccc-----h-------hhh-----------------cchhhhh
Q 035673 75 ----LRVLCH----------------V---K-----FTFC-----C-------DIY-----------------KNINKIK 97 (190)
Q Consensus 75 ----~~~~~~----------------~---~-----~~~~-----~-------~~~-----------------~~~~~~~ 97 (190)
...... . . .... . ..+ .....+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 236 (302)
T PRK00870 157 MPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLE 236 (302)
T ss_pred chHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhh
Confidence 000000 0 0 0000 0 000 0012346
Q ss_pred cCCCceEEEEcCCCceeechhHHHHHHHhCCCC--ceEEecCCCcCCCCChh-HHHHHHHHHHHHh
Q 035673 98 KVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPY--EPLWIKGGGHCNLELYP-DYIRHLCRFIQEM 160 (190)
Q Consensus 98 ~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~--~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~~ 160 (190)
++++|+++++|++|.+++... +.+.+.+++.. .+++++++||+.+.+.+ ++.+.+.+|++++
T Consensus 237 ~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 237 RWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred cCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 789999999999999999765 77777776541 37789999998766655 4779999999764
No 19
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.85 E-value=5.8e-21 Score=136.10 Aligned_cols=154 Identities=20% Similarity=0.265 Sum_probs=101.8
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCc--chh---
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGI--LSG--- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~--~~~--- 74 (190)
+|+||||.|..... . ..++..+.+..+.+.++ .++++++||||||.+++.++..+| +|++++++++. ...
T Consensus 48 ~D~~G~G~s~~~~~-~-~~~~~~~d~~~~l~~l~--~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~ 123 (255)
T PRK10673 48 VDMRNHGLSPRDPV-M-NYPAMAQDLLDTLDALQ--IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRR 123 (255)
T ss_pred ECCCCCCCCCCCCC-C-CHHHHHHHHHHHHHHcC--CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchh
Confidence 69999999985432 2 22333333333334443 367999999999999999999998 89999987531 100
Q ss_pred -------hhhh--------------hccccc----------------c--ch----hhh---cchhhhhcCCCceEEEEc
Q 035673 75 -------LRVL--------------CHVKFT----------------F--CC----DIY---KNINKIKKVKCPVLVIHG 108 (190)
Q Consensus 75 -------~~~~--------------~~~~~~----------------~--~~----~~~---~~~~~~~~~~~P~l~i~g 108 (190)
+... ...... + .. ..+ .....++.+++|+++++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 203 (255)
T PRK10673 124 HDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRG 203 (255)
T ss_pred hHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEEC
Confidence 0000 000000 0 00 000 001124456899999999
Q ss_pred CCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHHH
Q 035673 109 TEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQE 159 (190)
Q Consensus 109 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~~ 159 (190)
++|.+++.+..+.+.+.+++. ++++++++||+...+.++ +.+.+.+||.+
T Consensus 204 ~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 204 GNSPYVTEAYRDDLLAQFPQA-RAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCCCHHHHHHHHHhCCCc-EEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 999999988888888877764 888899999987666554 77999999864
No 20
>PRK07581 hypothetical protein; Validated
Probab=99.85 E-value=2.5e-20 Score=138.14 Aligned_cols=158 Identities=19% Similarity=0.208 Sum_probs=110.9
Q ss_pred CCCCCCCCCCCCCC---CC--------chhhhHHHHHHHHHHHhCCCCCc-EEEEEEccChHHHHHHHhhcC-ccceeee
Q 035673 1 YDYSGYGASTGKPS---ES--------NTYADIEAVYQCLQTEYGVSQED-LILYGQSVGSGPTLHLASKLP-RLRGVVL 67 (190)
Q Consensus 1 ~D~~G~G~s~~~~~---~~--------~~~~d~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~ 67 (190)
+|+||||.|+.... .. ...+|+......+.+++++ ++ ++|+||||||++|+.+|.++| +|+++|+
T Consensus 77 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvl 154 (339)
T PRK07581 77 PNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGI--ERLALVVGWSMGAQQTYHWAVRYPDMVERAAP 154 (339)
T ss_pred ecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCC--CceEEEEEeCHHHHHHHHHHHHCHHHHhhhee
Confidence 69999999975432 11 1345666666667777876 77 579999999999999999999 8999998
Q ss_pred cCCcchh----------h---------------------------hhh---------hccc-c---------c----cch
Q 035673 68 HSGILSG----------L---------------------------RVL---------CHVK-F---------T----FCC 87 (190)
Q Consensus 68 ~~~~~~~----------~---------------------------~~~---------~~~~-~---------~----~~~ 87 (190)
+++.... . ... .... . . ...
T Consensus 155 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (339)
T PRK07581 155 IAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWE 234 (339)
T ss_pred eecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHH
Confidence 8643210 0 000 0000 0 0 000
Q ss_pred ------h------------------h----hcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecC-C
Q 035673 88 ------D------------------I----YKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKG-G 138 (190)
Q Consensus 88 ------~------------------~----~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~-~ 138 (190)
+ . .+....+.++++|+++++|++|.++++..++.+.+.+++. +++++++ +
T Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a-~l~~i~~~~ 313 (339)
T PRK07581 235 GNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNA-ELRPIESIW 313 (339)
T ss_pred HhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC-eEEEeCCCC
Confidence 0 0 0112345568999999999999999999999888888764 8889998 8
Q ss_pred CcCCC-CChhHHHHHHHHHHHHhh
Q 035673 139 GHCNL-ELYPDYIRHLCRFIQEME 161 (190)
Q Consensus 139 ~H~~~-~~~~~~~~~i~~~l~~~~ 161 (190)
||..+ +..+++...|.+||++..
T Consensus 314 GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 314 GHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred CccccccCcHHHHHHHHHHHHHHH
Confidence 99754 455678899999999875
No 21
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.84 E-value=2.5e-20 Score=131.69 Aligned_cols=153 Identities=21% Similarity=0.241 Sum_probs=103.7
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhh---
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLR--- 76 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~--- 76 (190)
+|+||||.|+..... ...++..+.+..+.+.++ .++++++|||+||.+++.++..+| ++++++++++......
T Consensus 45 ~d~~G~G~s~~~~~~-~~~~~~~~~~~~~i~~~~--~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~ 121 (251)
T TIGR02427 45 YDKRGHGLSDAPEGP-YSIEDLADDVLALLDHLG--IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPES 121 (251)
T ss_pred ecCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHhC--CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhh
Confidence 699999999754332 234444444444555553 478999999999999999999988 8999998875321000
Q ss_pred ----------------------hhhccccc--------cch------------------hhhcchhhhhcCCCceEEEEc
Q 035673 77 ----------------------VLCHVKFT--------FCC------------------DIYKNINKIKKVKCPVLVIHG 108 (190)
Q Consensus 77 ----------------------~~~~~~~~--------~~~------------------~~~~~~~~~~~~~~P~l~i~g 108 (190)
......+. ... ...+....+.++++|+++++|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g 201 (251)
T TIGR02427 122 WNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAG 201 (251)
T ss_pred HHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEe
Confidence 00000000 000 000112345668899999999
Q ss_pred CCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHH
Q 035673 109 TEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFI 157 (190)
Q Consensus 109 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l 157 (190)
++|.+++.+..+.+.+.++.. ++++++++||+.+.+.+ ++.+.+.+|+
T Consensus 202 ~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 202 DQDGSTPPELVREIADLVPGA-RFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred ccCCcCChHHHHHHHHhCCCc-eEEEECCCCCcccccChHHHHHHHHHHh
Confidence 999999999888888887654 88899999998665555 4668888886
No 22
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=3.6e-20 Score=138.14 Aligned_cols=157 Identities=25% Similarity=0.307 Sum_probs=100.7
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh-cC-ccceeeecCCcchh----
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK-LP-RLRGVVLHSGILSG---- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~~-~v~~~v~~~~~~~~---- 74 (190)
+|+||||.|+.........++..+.+..+.+.+++ ++++++||||||.+++.++.. +| +|+++|++++....
T Consensus 120 ~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~ 197 (360)
T PLN02679 120 IDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQ--KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKA 197 (360)
T ss_pred ECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcC--CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcccccccc
Confidence 69999999986433222334444444344445544 789999999999999988874 57 89999998863210
Q ss_pred ----hhh------------h----------hc----cc-c------------cc---c-------------hhh----h-
Q 035673 75 ----LRV------------L----------CH----VK-F------------TF---C-------------CDI----Y- 90 (190)
Q Consensus 75 ----~~~------------~----------~~----~~-~------------~~---~-------------~~~----~- 90 (190)
... . .. .. . .. . ... .
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (360)
T PLN02679 198 VVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVT 277 (360)
T ss_pred ccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHh
Confidence 000 0 00 00 0 00 0 000 0
Q ss_pred -----cchhhhhcCCCceEEEEcCCCceeechhH-----HHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHHH
Q 035673 91 -----KNINKIKKVKCPVLVIHGTEDDVVNWLHG-----NKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQE 159 (190)
Q Consensus 91 -----~~~~~~~~~~~P~l~i~g~~D~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~~ 159 (190)
+....+.++++|+++++|++|.++|.... ..+.+.+++ .++++++++||+.+.+.++ +.+.|.+||++
T Consensus 278 ~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 278 GPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred cCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 00124567899999999999999987632 233334444 4888999999997766654 77999999976
Q ss_pred h
Q 035673 160 M 160 (190)
Q Consensus 160 ~ 160 (190)
.
T Consensus 357 ~ 357 (360)
T PLN02679 357 L 357 (360)
T ss_pred c
Confidence 4
No 23
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=7.7e-20 Score=132.49 Aligned_cols=154 Identities=18% Similarity=0.150 Sum_probs=104.9
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh-----
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG----- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~----- 74 (190)
+|+||||.|+.........++..+.+..+.++++. ++++++||||||.+++.++..+| +|+++|++++....
T Consensus 66 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 143 (286)
T PRK03204 66 PDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGL--DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLA 143 (286)
T ss_pred ECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCC--CCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchh
Confidence 59999999975443334456777777777777754 78999999999999999999998 99999987763210
Q ss_pred ---hhhhh-c--------------cc-----c--cc-------chh----------------hhc-ch---hh----hh-
Q 035673 75 ---LRVLC-H--------------VK-----F--TF-------CCD----------------IYK-NI---NK----IK- 97 (190)
Q Consensus 75 ---~~~~~-~--------------~~-----~--~~-------~~~----------------~~~-~~---~~----~~- 97 (190)
+.... . .. . .. ... .+. .. .. +.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T PRK03204 144 MKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPA 223 (286)
T ss_pred HHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhh
Confidence 00000 0 00 0 00 000 000 00 00 01
Q ss_pred -cCCCceEEEEcCCCceeech-hHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHH
Q 035673 98 -KVKCPVLVIHGTEDDVVNWL-HGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFI 157 (190)
Q Consensus 98 -~~~~P~l~i~g~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l 157 (190)
.+++|+++++|++|.++++. ..+.+.+.+++. ++++++++||+.+.+.++ +.+.|.+|+
T Consensus 224 ~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~-~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 224 TLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDH-VLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred hcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCC-eEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 11799999999999988665 456677777764 889999999998777665 668888886
No 24
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.84 E-value=7.3e-20 Score=138.23 Aligned_cols=158 Identities=15% Similarity=0.122 Sum_probs=111.6
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhh--
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRV-- 77 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~-- 77 (190)
+|+||+|.|.+.+...+.......+++++.....++.++++++||||||.+++.++..+| +++++|+++|+...+..
T Consensus 228 ~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~ 307 (414)
T PRK05077 228 IDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDP 307 (414)
T ss_pred ECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcch
Confidence 699999999764332333334467888888776678899999999999999999999888 89999999987642110
Q ss_pred --h----------hccccccc----------hhhhc--chhhh-hcCCCceEEEEcCCCceeechhHHHHHHHhCCCCce
Q 035673 78 --L----------CHVKFTFC----------CDIYK--NINKI-KKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEP 132 (190)
Q Consensus 78 --~----------~~~~~~~~----------~~~~~--~~~~~-~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~ 132 (190)
. ....+... ...+. ....+ +++++|+|+++|++|+++|.+.++.+.+..+. .++
T Consensus 308 ~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l 386 (414)
T PRK05077 308 KRQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD-GKL 386 (414)
T ss_pred hhhhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC-CeE
Confidence 0 00000000 00000 00112 46889999999999999999999988777765 488
Q ss_pred EEecCCCcCCCCChhHHHHHHHHHHHHhh
Q 035673 133 LWIKGGGHCNLELYPDYIRHLCRFIQEME 161 (190)
Q Consensus 133 ~~~~~~~H~~~~~~~~~~~~i~~~l~~~~ 161 (190)
++++++. .++..+++.+.+.+||++.+
T Consensus 387 ~~i~~~~--~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 387 LEIPFKP--VYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred EEccCCC--ccCCHHHHHHHHHHHHHHHh
Confidence 8899863 23455678899999998764
No 25
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.84 E-value=6.8e-20 Score=130.64 Aligned_cols=156 Identities=22% Similarity=0.291 Sum_probs=105.4
Q ss_pred CCCCCCCCCCCCCCCCchhh---hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh--
Q 035673 1 YDYSGYGASTGKPSESNTYA---DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG-- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~---d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~-- 74 (190)
+|++|+|.|+++....+... ...+.++..+..-++ ++.+|+|||+||+++..+|.++| +|+.+|+++|.--.
T Consensus 122 iDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L--~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~ 199 (365)
T KOG4409|consen 122 IDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL--EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEK 199 (365)
T ss_pred ecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCC--cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccC
Confidence 69999999998765533332 344455555555655 79999999999999999999999 99999999983110
Q ss_pred ------------------------------hhhh----------------hccc----cccchhh---------------
Q 035673 75 ------------------------------LRVL----------------CHVK----FTFCCDI--------------- 89 (190)
Q Consensus 75 ------------------------------~~~~----------------~~~~----~~~~~~~--------------- 89 (190)
++.. .... ..+..+.
T Consensus 200 ~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~f 279 (365)
T KOG4409|consen 200 PDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAF 279 (365)
T ss_pred CCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHH
Confidence 0000 0000 0000000
Q ss_pred -----------hcchhhhhcCC--CceEEEEcCCCceeechhHHHHHHHh-CCCCceEEecCCCcCCCCChhH-HHHHHH
Q 035673 90 -----------YKNINKIKKVK--CPVLVIHGTEDDVVNWLHGNKLWKMA-RDPYEPLWIKGGGHCNLELYPD-YIRHLC 154 (190)
Q Consensus 90 -----------~~~~~~~~~~~--~P~l~i~g~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~~~H~~~~~~~~-~~~~i~ 154 (190)
-.....++.++ +|+++|+|++|- .+.....++.+.+ ...++.++++++||+.+.+.++ +.+.+.
T Consensus 280 k~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~ 358 (365)
T KOG4409|consen 280 KNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVL 358 (365)
T ss_pred HHHHhccchhhhhHHHHHHhhccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHH
Confidence 00123444455 999999999996 5666667776653 3447899999999987777666 668888
Q ss_pred HHHHH
Q 035673 155 RFIQE 159 (190)
Q Consensus 155 ~~l~~ 159 (190)
.++++
T Consensus 359 ~~~~~ 363 (365)
T KOG4409|consen 359 EECDK 363 (365)
T ss_pred HHHhc
Confidence 88765
No 26
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.84 E-value=7.2e-20 Score=139.40 Aligned_cols=156 Identities=17% Similarity=0.269 Sum_probs=107.0
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHH-HHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh---
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVY-QCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL--- 75 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~--- 75 (190)
+|+||||.|+.........++..+.+ ..+.+.+++ ++++++||||||.+++.++.++| +|+++++++|.....
T Consensus 238 ~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~--~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~ 315 (481)
T PLN03087 238 VDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKV--KSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKG 315 (481)
T ss_pred ECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCC--CCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccc
Confidence 59999999975433223344444444 355666654 78999999999999999999999 899999998632100
Q ss_pred ----hhh----------------------hc---ccc-----------c-------------cchh---------hhcc-
Q 035673 76 ----RVL----------------------CH---VKF-----------T-------------FCCD---------IYKN- 92 (190)
Q Consensus 76 ----~~~----------------------~~---~~~-----------~-------------~~~~---------~~~~- 92 (190)
... .. ... . ...+ .+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l 395 (481)
T PLN03087 316 VQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTL 395 (481)
T ss_pred hhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHH
Confidence 000 00 000 0 0000 0000
Q ss_pred --------------h-hhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCC--CChhHHHHHHHH
Q 035673 93 --------------I-NKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNL--ELYPDYIRHLCR 155 (190)
Q Consensus 93 --------------~-~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~--~~~~~~~~~i~~ 155 (190)
. ....++++|+++++|++|.++|++.++.+.+.++.. ++++++++||..+ +.++++.+.|.+
T Consensus 396 ~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a-~l~vI~~aGH~~~v~e~p~~fa~~L~~ 474 (481)
T PLN03087 396 HNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRA-RVKVIDDKDHITIVVGRQKEFARELEE 474 (481)
T ss_pred HHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCC-EEEEeCCCCCcchhhcCHHHHHHHHHH
Confidence 0 011258999999999999999999999999888764 8999999999855 445568899999
Q ss_pred HHHH
Q 035673 156 FIQE 159 (190)
Q Consensus 156 ~l~~ 159 (190)
|++.
T Consensus 475 F~~~ 478 (481)
T PLN03087 475 IWRR 478 (481)
T ss_pred Hhhc
Confidence 9864
No 27
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.84 E-value=4.8e-20 Score=131.58 Aligned_cols=149 Identities=17% Similarity=0.177 Sum_probs=101.3
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh-----
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG----- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~----- 74 (190)
+|+||||.|+... .. .+.+.++.+.+ + ..++++++||||||.+++.+|..+| +++++|++++....
T Consensus 45 ~Dl~G~G~S~~~~-~~----~~~~~~~~l~~-~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~ 116 (256)
T PRK10349 45 VDLPGFGRSRGFG-AL----SLADMAEAVLQ-Q--APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDE 116 (256)
T ss_pred ecCCCCCCCCCCC-CC----CHHHHHHHHHh-c--CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCC
Confidence 6999999997532 22 22333444443 2 3378999999999999999999999 89999998763110
Q ss_pred -----------hh------------hhh-----ccc-ccc-------------------c------hhhhcchhhhhcCC
Q 035673 75 -----------LR------------VLC-----HVK-FTF-------------------C------CDIYKNINKIKKVK 100 (190)
Q Consensus 75 -----------~~------------~~~-----~~~-~~~-------------------~------~~~~~~~~~~~~~~ 100 (190)
+. .+. ... ... . ....+....+.+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 196 (256)
T PRK10349 117 WPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVS 196 (256)
T ss_pred CCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcC
Confidence 00 000 000 000 0 00011123566789
Q ss_pred CceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHH
Q 035673 101 CPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQ 158 (190)
Q Consensus 101 ~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~ 158 (190)
+|+++++|++|.++|.+.++.+.+.+++. ++++++++||+.+.+.++ +.+.+.+|-+
T Consensus 197 ~P~lii~G~~D~~~~~~~~~~~~~~i~~~-~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 197 MPFLRLYGYLDGLVPRKVVPMLDKLWPHS-ESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCeEEEecCCCccCCHHHHHHHHHhCCCC-eEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 99999999999999988888777777654 899999999997766655 6688887743
No 28
>PLN02578 hydrolase
Probab=99.83 E-value=9.9e-20 Score=135.60 Aligned_cols=153 Identities=22% Similarity=0.303 Sum_probs=103.3
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch------
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS------ 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~------ 73 (190)
+|+||||.|+.............++.+++.+. ..++++++|||+||.+++.+|.++| ++++++++++...
T Consensus 118 ~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~---~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~ 194 (354)
T PLN02578 118 LDLLGFGWSDKALIEYDAMVWRDQVADFVKEV---VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESR 194 (354)
T ss_pred ECCCCCCCCCCcccccCHHHHHHHHHHHHHHh---ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccccc
Confidence 69999999987644333332233444444333 2378999999999999999999999 9999998875210
Q ss_pred -----------hhhh--------hh-c---------c------------ccc-------cc-----------------hh
Q 035673 74 -----------GLRV--------LC-H---------V------------KFT-------FC-----------------CD 88 (190)
Q Consensus 74 -----------~~~~--------~~-~---------~------------~~~-------~~-----------------~~ 88 (190)
.... .. . . .+. +. ..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (354)
T PLN02578 195 EKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYR 274 (354)
T ss_pred ccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHH
Confidence 0000 00 0 0 000 00 00
Q ss_pred ----------hhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHH
Q 035673 89 ----------IYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFI 157 (190)
Q Consensus 89 ----------~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l 157 (190)
.....+.+.++++|+++++|++|.+++.+.++.+.+.+++. +++++ ++||+.+.+.+ ++.+.|.+|+
T Consensus 275 ~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a-~l~~i-~~GH~~~~e~p~~~~~~I~~fl 352 (354)
T PLN02578 275 LMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDT-TLVNL-QAGHCPHDEVPEQVNKALLEWL 352 (354)
T ss_pred HHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC-EEEEe-CCCCCccccCHHHHHHHHHHHH
Confidence 00112345678999999999999999999998888887764 77777 68999776665 5779999998
Q ss_pred H
Q 035673 158 Q 158 (190)
Q Consensus 158 ~ 158 (190)
+
T Consensus 353 ~ 353 (354)
T PLN02578 353 S 353 (354)
T ss_pred h
Confidence 5
No 29
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.83 E-value=9.3e-20 Score=136.72 Aligned_cols=160 Identities=26% Similarity=0.297 Sum_probs=111.7
Q ss_pred CCCCCCCCCCCCCCC----CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCCcch
Q 035673 1 YDYSGYGASTGKPSE----SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGILS 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~~~ 73 (190)
+|+||||.|++.... ....+|+..+++++.... +..+++++||||||.+++.++.... +++++|+.+|+..
T Consensus 169 ~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 169 MDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALR 246 (395)
T ss_pred eCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccc
Confidence 699999999865332 233568888888887664 3358999999999999998775321 6899999998642
Q ss_pred hhh-----h--------hhc-------ccc--cc----------chh---------------hhc----chhhhhcCCCc
Q 035673 74 GLR-----V--------LCH-------VKF--TF----------CCD---------------IYK----NINKIKKVKCP 102 (190)
Q Consensus 74 ~~~-----~--------~~~-------~~~--~~----------~~~---------------~~~----~~~~~~~~~~P 102 (190)
... . ... ... .. ..+ ... ....+.++++|
T Consensus 247 ~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vP 326 (395)
T PLN02652 247 VKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVP 326 (395)
T ss_pred cccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCC
Confidence 110 0 000 000 00 000 000 11345678999
Q ss_pred eEEEEcCCCceeechhHHHHHHHhCC-CCceEEecCCCcCCCCC--hhHHHHHHHHHHHHhhc
Q 035673 103 VLVIHGTEDDVVNWLHGNKLWKMARD-PYEPLWIKGGGHCNLEL--YPDYIRHLCRFIQEMEN 162 (190)
Q Consensus 103 ~l~i~g~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~--~~~~~~~i~~~l~~~~~ 162 (190)
+|+++|++|.++|++.++++++.+.. .++++++++++|..+.+ .+++.+.+.+||.....
T Consensus 327 vLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 327 FMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998664 35788999999986443 45688999999987753
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.83 E-value=2e-19 Score=129.72 Aligned_cols=154 Identities=19% Similarity=0.265 Sum_probs=104.1
Q ss_pred CCCCCCCCCCCCCCCC--chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhh
Q 035673 1 YDYSGYGASTGKPSES--NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRV 77 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~ 77 (190)
+|+||||.|....... ...+++.+.+..+.+.++. ++++++||||||.+++.++..+| ++++++++++.......
T Consensus 59 ~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 136 (288)
T TIGR01250 59 YDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGL--DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEY 136 (288)
T ss_pred EcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCC--CcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHH
Confidence 5999999998543222 3345555556666666654 67999999999999999999999 89999988764321000
Q ss_pred -------hhcc--------------c----------cccch---------------------------------------
Q 035673 78 -------LCHV--------------K----------FTFCC--------------------------------------- 87 (190)
Q Consensus 78 -------~~~~--------------~----------~~~~~--------------------------------------- 87 (190)
.... . .....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (288)
T TIGR01250 137 VKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITG 216 (288)
T ss_pred HHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccc
Confidence 0000 0 00000
Q ss_pred --hhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHHH
Q 035673 88 --DIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFIQ 158 (190)
Q Consensus 88 --~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~ 158 (190)
..++....+.++++|+++++|++|.+ ++...+.+.+.++.. ++++++++||+.+.+.+ ++.+.|.+||+
T Consensus 217 ~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 217 NLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGS-RLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCC-eEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 00011134567889999999999985 567777777777654 78889999998765554 57789988873
No 31
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.83 E-value=5.1e-20 Score=128.99 Aligned_cols=150 Identities=26% Similarity=0.424 Sum_probs=109.5
Q ss_pred CCCCCCCCCCC---CCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCc--chh
Q 035673 1 YDYSGYGASTG---KPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGI--LSG 74 (190)
Q Consensus 1 ~D~~G~G~s~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~--~~~ 74 (190)
+|+||+|.|++ ........+|+.+.++.+.+.+++ ++++++||||||.+++.+++.+| +|+++++++++ ...
T Consensus 6 ~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~~~~ 83 (230)
T PF00561_consen 6 FDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPDLPD 83 (230)
T ss_dssp EECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSHHHH
T ss_pred EeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeeccchh
Confidence 58999999995 344456678999999999999976 66999999999999999999999 89999999985 100
Q ss_pred -h------h-hh-----------------------h-------cc---------c---c-c----c-----------chh
Q 035673 75 -L------R-VL-----------------------C-------HV---------K---F-T----F-----------CCD 88 (190)
Q Consensus 75 -~------~-~~-----------------------~-------~~---------~---~-~----~-----------~~~ 88 (190)
. . .. . .. . . . . ...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (230)
T PF00561_consen 84 GLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALGYFS 163 (230)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccccccc
Confidence 0 0 00 0 00 0 0 0 0 000
Q ss_pred hhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHH
Q 035673 89 IYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHL 153 (190)
Q Consensus 89 ~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i 153 (190)
..+....+..+++|+++++|++|.++|+.....+.+.+++. ++++++++||+.+.+.++ +.+.|
T Consensus 164 ~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~-~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 164 VWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNS-QLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp HHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTE-EEEEETTCCSTHHHHSHHHHHHHH
T ss_pred cccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCC-EEEECCCCChHHHhcCHHhhhhhh
Confidence 01112345678999999999999999999999988888774 888999999986655544 44443
No 32
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=2.9e-19 Score=130.72 Aligned_cols=158 Identities=25% Similarity=0.277 Sum_probs=107.2
Q ss_pred CCCCCCCC-CCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceee---ecCCcchhh
Q 035673 1 YDYSGYGA-STGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVV---LHSGILSGL 75 (190)
Q Consensus 1 ~D~~G~G~-s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v---~~~~~~~~~ 75 (190)
+|++|||. |..+........+....+..+...... ++++++|||+||.+|+.+|+.+| .|++++ ++++.....
T Consensus 92 iDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~--~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 92 IDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFV--EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYST 169 (326)
T ss_pred EecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcC--cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccC
Confidence 59999994 443433334444555555555555543 66999999999999999999999 899999 665522100
Q ss_pred h--------hh---------------------hc--------------------------cc----------cccc--hh
Q 035673 76 R--------VL---------------------CH--------------------------VK----------FTFC--CD 88 (190)
Q Consensus 76 ~--------~~---------------------~~--------------------------~~----------~~~~--~~ 88 (190)
. .. .. .. ..+. ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (326)
T KOG1454|consen 170 PKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELL 249 (326)
T ss_pred CcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEecc
Confidence 0 00 00 00 0000 00
Q ss_pred h--hcchhhhhcCC-CceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHHHHhh
Q 035673 89 I--YKNINKIKKVK-CPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFIQEME 161 (190)
Q Consensus 89 ~--~~~~~~~~~~~-~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~~~ 161 (190)
. ......++++. +|+++++|+.|+++|.+.+..+.+.+ .+.++++++++||..+.+.| ++...|..|+....
T Consensus 250 ~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 250 GFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred CccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 0 11122445565 99999999999999999999999888 44599999999998776655 47799999998753
No 33
>PRK10566 esterase; Provisional
Probab=99.82 E-value=3.2e-19 Score=126.83 Aligned_cols=157 Identities=19% Similarity=0.248 Sum_probs=103.6
Q ss_pred CCCCCCCCCCCCCC-C--C-------chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeec--
Q 035673 1 YDYSGYGASTGKPS-E--S-------NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLH-- 68 (190)
Q Consensus 1 ~D~~G~G~s~~~~~-~--~-------~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~-- 68 (190)
+|+||||.+..... . . ...+|+.++++++.+...++.++++++|||+||.+++.++..+|.+.+.+.+
T Consensus 60 ~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 60 PDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred ecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 58999997632211 1 1 1235667777887776556778999999999999999999988866554433
Q ss_pred CCcchhhhhhh-cccc-------cc------chhhhcchhhhhcC-CCceEEEEcCCCceeechhHHHHHHHhCCC----
Q 035673 69 SGILSGLRVLC-HVKF-------TF------CCDIYKNINKIKKV-KCPVLVIHGTEDDVVNWLHGNKLWKMARDP---- 129 (190)
Q Consensus 69 ~~~~~~~~~~~-~~~~-------~~------~~~~~~~~~~~~~~-~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~---- 129 (190)
+++........ .... .. ....++....+.++ ++|+|+++|++|.+++++.++.+++.++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~ 219 (249)
T PRK10566 140 SGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDK 219 (249)
T ss_pred cHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCc
Confidence 22222111100 0000 00 01112222345565 699999999999999999999999877643
Q ss_pred -CceEEecCCCcCCCCChhHHHHHHHHHHHHh
Q 035673 130 -YEPLWIKGGGHCNLELYPDYIRHLCRFIQEM 160 (190)
Q Consensus 130 -~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~ 160 (190)
.+++++++++|.. .++..+.+.+||+++
T Consensus 220 ~~~~~~~~~~~H~~---~~~~~~~~~~fl~~~ 248 (249)
T PRK10566 220 NLTCLWEPGVRHRI---TPEALDAGVAFFRQH 248 (249)
T ss_pred ceEEEecCCCCCcc---CHHHHHHHHHHHHhh
Confidence 3556789999964 356789999999864
No 34
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.82 E-value=3.3e-19 Score=126.56 Aligned_cols=158 Identities=25% Similarity=0.328 Sum_probs=110.1
Q ss_pred CCCCCCCCCCCCCC-CCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch-----
Q 035673 1 YDYSGYGASTGKPS-ESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS----- 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~----- 73 (190)
+|+||+|.|+.++. .......+...+..+.++++. ++++++||++|+++|+.+|..+| +++++|+++....
T Consensus 77 ~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~--~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~ 154 (322)
T KOG4178|consen 77 PDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGL--KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLK 154 (322)
T ss_pred cCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhcc--ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccc
Confidence 69999999997665 344444555566666667764 89999999999999999999999 9999998875322
Q ss_pred ---hhhhhhc--------------------------------c--------c--------------------------cc
Q 035673 74 ---GLRVLCH--------------------------------V--------K--------------------------FT 84 (190)
Q Consensus 74 ---~~~~~~~--------------------------------~--------~--------------------------~~ 84 (190)
....... . . +.
T Consensus 155 ~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~ 234 (322)
T KOG4178|consen 155 PLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFT 234 (322)
T ss_pred hhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccccc
Confidence 0000000 0 0 00
Q ss_pred cchhhhcc--------hhhhhcCCCceEEEEcCCCceeech-hHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHH
Q 035673 85 FCCDIYKN--------INKIKKVKCPVLVIHGTEDDVVNWL-HGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLC 154 (190)
Q Consensus 85 ~~~~~~~~--------~~~~~~~~~P~l~i~g~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~ 154 (190)
...+.++. ...+.++++|+++++|+.|.+.+.. ....+.+.++...+.++++++||+...+.+ ++.+.+.
T Consensus 235 gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~ 314 (322)
T KOG4178|consen 235 GPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAIL 314 (322)
T ss_pred ccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHH
Confidence 00111111 1234567899999999999998877 444455556655678889999999876665 5889999
Q ss_pred HHHHHh
Q 035673 155 RFIQEM 160 (190)
Q Consensus 155 ~~l~~~ 160 (190)
+|+++.
T Consensus 315 ~f~~~~ 320 (322)
T KOG4178|consen 315 GFINSF 320 (322)
T ss_pred HHHHhh
Confidence 999875
No 35
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.82 E-value=7e-20 Score=122.60 Aligned_cols=154 Identities=19% Similarity=0.269 Sum_probs=113.2
Q ss_pred CCCCCCCCCCCCC---CCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhh
Q 035673 1 YDYSGYGASTGKP---SESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRV 77 (190)
Q Consensus 1 ~D~~G~G~s~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~ 77 (190)
|.|||||...... ...+|++|+.+..+++.+. ..+.|.++|-||||.+++.+|.++| ++++|.+|+......+
T Consensus 48 P~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~---gy~eI~v~GlSmGGv~alkla~~~p-~K~iv~m~a~~~~k~~ 123 (243)
T COG1647 48 PRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA---GYDEIAVVGLSMGGVFALKLAYHYP-PKKIVPMCAPVNVKSW 123 (243)
T ss_pred CCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc---CCCeEEEEeecchhHHHHHHHhhCC-ccceeeecCCcccccc
Confidence 5689999776433 2367888999999999865 3378999999999999999999998 8999988875542111
Q ss_pred -------------hhcc---ccccc---hhh----------------hcchhhhhcCCCceEEEEcCCCceeechhHHHH
Q 035673 78 -------------LCHV---KFTFC---CDI----------------YKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKL 122 (190)
Q Consensus 78 -------------~~~~---~~~~~---~~~----------------~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~ 122 (190)
.... ..... ... -.....+..|..|+++++|.+|+.+|.+.+..+
T Consensus 124 ~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~I 203 (243)
T COG1647 124 RIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFI 203 (243)
T ss_pred hhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHH
Confidence 0000 00000 000 011245667889999999999999999999999
Q ss_pred HHHhCCC-CceEEecCCCcCCCCC--hhHHHHHHHHHHH
Q 035673 123 WKMARDP-YEPLWIKGGGHCNLEL--YPDYIRHLCRFIQ 158 (190)
Q Consensus 123 ~~~~~~~-~~~~~~~~~~H~~~~~--~~~~~~~i~~~l~ 158 (190)
++..... +++.++++.||....+ .+++.+.+..||+
T Consensus 204 y~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 204 YDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 9987654 6899999999975433 3458899999986
No 36
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.82 E-value=2e-19 Score=126.79 Aligned_cols=148 Identities=19% Similarity=0.182 Sum_probs=101.5
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh-----
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG----- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~----- 74 (190)
+|+||||.|+.... .++.++++.+.+.. .++++++||||||.+++.++.++| +++++|++++....
T Consensus 36 ~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~ 107 (245)
T TIGR01738 36 VDLPGHGRSRGFGP-----LSLADAAEAIAAQA---PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSARED 107 (245)
T ss_pred ecCCcCccCCCCCC-----cCHHHHHHHHHHhC---CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCc
Confidence 69999999875321 23445555555543 268999999999999999999999 79999988753210
Q ss_pred hh---------hh---hcccc-------------c--c-------chh---------------------hhcchhhhhcC
Q 035673 75 LR---------VL---CHVKF-------------T--F-------CCD---------------------IYKNINKIKKV 99 (190)
Q Consensus 75 ~~---------~~---~~~~~-------------~--~-------~~~---------------------~~~~~~~~~~~ 99 (190)
+. .. ..... . . ... ..+....+.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 187 (245)
T TIGR01738 108 WPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNI 187 (245)
T ss_pred ccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcC
Confidence 00 00 00000 0 0 000 00011345678
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHH
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFI 157 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l 157 (190)
++|+++++|++|.+++.+..+.+.+.+++ .++++++++||+.+.+.+ ++.+.+.+|+
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLAPH-SELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhCCC-CeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 99999999999999999988888877765 488999999998665554 5778888885
No 37
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.81 E-value=8.7e-19 Score=126.96 Aligned_cols=159 Identities=23% Similarity=0.336 Sum_probs=109.2
Q ss_pred CCCCCCCCCC-CCCCCCc----hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh
Q 035673 1 YDYSGYGAST-GKPSESN----TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG 74 (190)
Q Consensus 1 ~D~~G~G~s~-~~~~~~~----~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~ 74 (190)
+|+||||.|. +...... +..|+..+++.+.+.. ...+++++||||||.+++.++.+++ +|+++|+.+|+...
T Consensus 67 ~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l 144 (298)
T COG2267 67 LDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGL 144 (298)
T ss_pred ecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccC
Confidence 6999999997 3333322 3345555555554432 4579999999999999999999998 99999999997654
Q ss_pred hh--hh-----------hcc--ccccch--------hh----------h-----------------------c--chhhh
Q 035673 75 LR--VL-----------CHV--KFTFCC--------DI----------Y-----------------------K--NINKI 96 (190)
Q Consensus 75 ~~--~~-----------~~~--~~~~~~--------~~----------~-----------------------~--~~~~~ 96 (190)
.. .. ... .+.... +. + . .....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~ 224 (298)
T COG2267 145 GGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDA 224 (298)
T ss_pred ChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhcc
Confidence 31 00 000 000000 00 0 0 00123
Q ss_pred hcCCCceEEEEcCCCceee-chhHHHHHHHhCCC-CceEEecCCCcCCCCCh----hHHHHHHHHHHHHhh
Q 035673 97 KKVKCPVLVIHGTEDDVVN-WLHGNKLWKMARDP-YEPLWIKGGGHCNLELY----PDYIRHLCRFIQEME 161 (190)
Q Consensus 97 ~~~~~P~l~i~g~~D~~v~-~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~----~~~~~~i~~~l~~~~ 161 (190)
..+++|+++++|++|.+++ .+...++++.+..+ .++++++|+.|..+.+. +++++.+.+|+.+..
T Consensus 225 ~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 225 PAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred ccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 4568999999999999999 78888888888766 47899999999765544 347788888887654
No 38
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.81 E-value=9e-19 Score=123.95 Aligned_cols=148 Identities=16% Similarity=0.180 Sum_probs=94.8
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-c-cceeeecCCcchhhh--
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-R-LRGVVLHSGILSGLR-- 76 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~-v~~~v~~~~~~~~~~-- 76 (190)
+|+||||.|+.... . ..++..+.+..+.+.++ .++++++||||||.+++.++.+++ + +++++++++......
T Consensus 33 ~D~~G~G~S~~~~~-~-~~~~~~~~l~~~l~~~~--~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~ 108 (242)
T PRK11126 33 IDLPGHGGSAAISV-D-GFADVSRLLSQTLQSYN--ILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAE 108 (242)
T ss_pred ecCCCCCCCCCccc-c-CHHHHHHHHHHHHHHcC--CCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHH
Confidence 69999999975432 2 33443334444444454 389999999999999999999985 4 999998875421000
Q ss_pred -----------hh--hc-cc----------------ccc-----chhh---------------------hcchhhhhcCC
Q 035673 77 -----------VL--CH-VK----------------FTF-----CCDI---------------------YKNINKIKKVK 100 (190)
Q Consensus 77 -----------~~--~~-~~----------------~~~-----~~~~---------------------~~~~~~~~~~~ 100 (190)
+. .. .. ... .... .+....+.+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 188 (242)
T PRK11126 109 ERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALT 188 (242)
T ss_pred HHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccC
Confidence 00 00 00 000 0000 00113456789
Q ss_pred CceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHHH
Q 035673 101 CPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQE 159 (190)
Q Consensus 101 ~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~~ 159 (190)
+|+++++|++|..+. .+.+.. ..++++++++||+.+.+.++ +.+.|.+|+++
T Consensus 189 ~P~lii~G~~D~~~~-----~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 189 FPFYYLCGERDSKFQ-----ALAQQL--ALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CCeEEEEeCCcchHH-----HHHHHh--cCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 999999999998653 222222 35889999999997766655 77899999865
No 39
>PLN02511 hydrolase
Probab=99.81 E-value=5.6e-19 Score=132.79 Aligned_cols=160 Identities=17% Similarity=0.223 Sum_probs=109.0
Q ss_pred CCCCCCCCCCCCCC---CCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-c--cceeeecCCcchh
Q 035673 1 YDYSGYGASTGKPS---ESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-R--LRGVVLHSGILSG 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~--v~~~v~~~~~~~~ 74 (190)
+|+||||.|..... .....+|+.++++++...+ +..+++++||||||.+++.++.+++ + +.+++++++..+.
T Consensus 135 ~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l 212 (388)
T PLN02511 135 FNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL 212 (388)
T ss_pred EecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH
Confidence 59999999975322 1356789999999999886 3468999999999999999999988 4 7787776654321
Q ss_pred h----------h------------hhhc-cc--c-----cc----c--------h------------------hhhcchh
Q 035673 75 L----------R------------VLCH-VK--F-----TF----C--------C------------------DIYKNIN 94 (190)
Q Consensus 75 ~----------~------------~~~~-~~--~-----~~----~--------~------------------~~~~~~~ 94 (190)
. . .... .. + .. . + ...+...
T Consensus 213 ~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~ 292 (388)
T PLN02511 213 VIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSD 292 (388)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchh
Confidence 0 0 0000 00 0 00 0 0 0001123
Q ss_pred hhhcCCCceEEEEcCCCceeechhH-HHHHHHhCCCCceEEecCCCcCCCCChhH-------HHHHHHHHHHHhhcc
Q 035673 95 KIKKVKCPVLVIHGTEDDVVNWLHG-NKLWKMARDPYEPLWIKGGGHCNLELYPD-------YIRHLCRFIQEMENM 163 (190)
Q Consensus 95 ~~~~~~~P~l~i~g~~D~~v~~~~~-~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-------~~~~i~~~l~~~~~~ 163 (190)
.+.++++|+++|+|++|++++.... ....+..+. .++++++++||..+.+.++ +.+.+.+||+.....
T Consensus 293 ~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~-~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 293 SIKHVRVPLLCIQAANDPIAPARGIPREDIKANPN-CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred hhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC-EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 5667899999999999999987754 334444443 4788899999987665543 358999999877543
No 40
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.80 E-value=4.9e-19 Score=131.42 Aligned_cols=155 Identities=19% Similarity=0.142 Sum_probs=104.8
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCc-EEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh----
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQED-LILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG---- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~---- 74 (190)
+|+||||.|... . ...++..+.+..+.+.+++ ++ ++++||||||++++.++.++| +|+++|++++....
T Consensus 105 ~Dl~G~g~s~~~--~-~~~~~~a~dl~~ll~~l~l--~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~ 179 (343)
T PRK08775 105 FDFIGADGSLDV--P-IDTADQADAIALLLDALGI--ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA 179 (343)
T ss_pred EeCCCCCCCCCC--C-CCHHHHHHHHHHHHHHcCC--CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH
Confidence 599999987532 2 2234444444555566655 44 579999999999999999999 99999999864210
Q ss_pred --hhh---h-----------------------h-ccc-------cccch-----------h---------hh--------
Q 035673 75 --LRV---L-----------------------C-HVK-------FTFCC-----------D---------IY-------- 90 (190)
Q Consensus 75 --~~~---~-----------------------~-~~~-------~~~~~-----------~---------~~-------- 90 (190)
... . . ... +.... . ..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 259 (343)
T PRK08775 180 AAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAY 259 (343)
T ss_pred HHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHH
Confidence 000 0 0 000 00000 0 00
Q ss_pred -------cc-hhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecC-CCcCCCCChh-HHHHHHHHHHHHh
Q 035673 91 -------KN-INKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKG-GGHCNLELYP-DYIRHLCRFIQEM 160 (190)
Q Consensus 91 -------~~-~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~~~-~~~~~i~~~l~~~ 160 (190)
.. ...+.++++|+++++|++|.++|++...++.+.+....+++++++ +||..+.+.+ ++.+.|.+||++.
T Consensus 260 ~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 260 LRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred HHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 00 012457889999999999999999989999888854458899985 9998665554 5779999999765
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.80 E-value=5.7e-19 Score=132.40 Aligned_cols=152 Identities=24% Similarity=0.299 Sum_probs=102.2
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh----
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL---- 75 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~---- 75 (190)
+|+||||.|...... ...+++.+.+..+.+.++ ..+++++|||+||.+++.++..+| ++.++++++|.....
T Consensus 163 ~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~ 239 (371)
T PRK14875 163 LDLPGHGASSKAVGA-GSLDELAAAVLAFLDALG--IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEING 239 (371)
T ss_pred EcCCCCCCCCCCCCC-CCHHHHHHHHHHHHHhcC--CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccch
Confidence 699999999654333 334555555555556664 478999999999999999999988 899999988742100
Q ss_pred ---hhh----------------hcccccc-------------------------------chhhhcchhhhhcCCCceEE
Q 035673 76 ---RVL----------------CHVKFTF-------------------------------CCDIYKNINKIKKVKCPVLV 105 (190)
Q Consensus 76 ---~~~----------------~~~~~~~-------------------------------~~~~~~~~~~~~~~~~P~l~ 105 (190)
..+ ....... .....+....+.++++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 319 (371)
T PRK14875 240 DYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLV 319 (371)
T ss_pred hHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEE
Confidence 000 0000000 00001112245678999999
Q ss_pred EEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHHHH
Q 035673 106 IHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFIQE 159 (190)
Q Consensus 106 i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~ 159 (190)
++|++|.++++..++.+ ....++.+++++||+.+.+.+ ++.+.|.+||++
T Consensus 320 i~g~~D~~vp~~~~~~l----~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 320 IWGEQDRIIPAAHAQGL----PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EEECCCCccCHHHHhhc----cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 99999999998766543 334578899999998766555 466888888864
No 42
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.80 E-value=1.4e-18 Score=122.66 Aligned_cols=153 Identities=22% Similarity=0.291 Sum_probs=99.9
Q ss_pred CCCCCCCCCCCCCC-CCchhhhHHHH-HHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhh
Q 035673 1 YDYSGYGASTGKPS-ESNTYADIEAV-YQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRV 77 (190)
Q Consensus 1 ~D~~G~G~s~~~~~-~~~~~~d~~~~-~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~ 77 (190)
+|+||||.|+.... .....++..+. +..+.+.+ +.++++++|||+||.+++.++.++| .+++++++++.......
T Consensus 33 ~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~ 110 (251)
T TIGR03695 33 IDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL--GIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATE 110 (251)
T ss_pred EcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc--CCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCch
Confidence 59999999975432 12233343333 66666666 3478999999999999999999999 89999998864321100
Q ss_pred ----------------hhcc----------c---ccc---chh-----------------------------hhcchhhh
Q 035673 78 ----------------LCHV----------K---FTF---CCD-----------------------------IYKNINKI 96 (190)
Q Consensus 78 ----------------~~~~----------~---~~~---~~~-----------------------------~~~~~~~~ 96 (190)
+... . +.. ... .......+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (251)
T TIGR03695 111 EERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKL 190 (251)
T ss_pred HhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHh
Confidence 0000 0 000 000 00011234
Q ss_pred hcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHH
Q 035673 97 KKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFI 157 (190)
Q Consensus 97 ~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l 157 (190)
.++++|+++++|++|..++ ...+.+.+..+. .++++++++||+.+.+.+ ++.+.+.+||
T Consensus 191 ~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 191 QALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTLVIIANAGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred hCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcEEEEcCCCCCcCccChHHHHHHHHHHh
Confidence 5688999999999998764 445555555543 588899999998766554 5778888887
No 43
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.80 E-value=1.9e-18 Score=126.38 Aligned_cols=155 Identities=23% Similarity=0.295 Sum_probs=106.7
Q ss_pred CCCCCCCCCCCCCCC-CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh----
Q 035673 1 YDYSGYGASTGKPSE-SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG---- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~---- 74 (190)
+|+||||.|+..... ....+++.+.+..+.+++++ ++++++||||||.+++.++..+| +++++|+++++...
T Consensus 59 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~--~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 136 (306)
T TIGR01249 59 FDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGI--KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEW 136 (306)
T ss_pred ECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC--CCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHH
Confidence 599999999854322 23345666777777777754 78999999999999999999999 89999988764210
Q ss_pred -------h--------hhhh-c--cccc--------------c---------------ch--------------------
Q 035673 75 -------L--------RVLC-H--VKFT--------------F---------------CC-------------------- 87 (190)
Q Consensus 75 -------~--------~~~~-~--~~~~--------------~---------------~~-------------------- 87 (190)
. .... . .... . ..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (306)
T TIGR01249 137 SWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFS 216 (306)
T ss_pred HHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHH
Confidence 0 0000 0 0000 0 00
Q ss_pred ---hhh-----------c----chhhhhcC-CCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH
Q 035673 88 ---DIY-----------K----NINKIKKV-KCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD 148 (190)
Q Consensus 88 ---~~~-----------~----~~~~~~~~-~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 148 (190)
... . ....+.++ ++|+++++|++|.++|.+.++.+.+.++.. ++++++++||... .++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~-~~~~~~~~gH~~~--~~~ 293 (306)
T TIGR01249 217 LAFARLENHYFVNKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEA-ELKVTNNAGHSAF--DPN 293 (306)
T ss_pred HHHHHHHHhHHHHhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCC-EEEEECCCCCCCC--ChH
Confidence 000 0 01123445 589999999999999999999999888764 8888999999864 355
Q ss_pred HHHHHHHHHHHh
Q 035673 149 YIRHLCRFIQEM 160 (190)
Q Consensus 149 ~~~~i~~~l~~~ 160 (190)
..+.|.+|+...
T Consensus 294 ~~~~i~~~~~~~ 305 (306)
T TIGR01249 294 NLAALVHALETY 305 (306)
T ss_pred HHHHHHHHHHHh
Confidence 667777777654
No 44
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=2.8e-18 Score=129.53 Aligned_cols=160 Identities=18% Similarity=0.187 Sum_probs=103.6
Q ss_pred CCCCCCCCCCCCCCCCchhh----hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh-
Q 035673 1 YDYSGYGASTGKPSESNTYA----DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~----d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~- 74 (190)
+|+||||.|+.........+ .+.+.+..+.+..+ .++++++||||||.+++.++.++| +++++|+++|....
T Consensus 137 ~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~--~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~ 214 (402)
T PLN02894 137 IDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKN--LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSS 214 (402)
T ss_pred ECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcC--CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccC
Confidence 59999999975432211111 12222333334444 368999999999999999999999 89999999864210
Q ss_pred --------hh-----h-------h-------------------------hcccc--------------ccchh-------
Q 035673 75 --------LR-----V-------L-------------------------CHVKF--------------TFCCD------- 88 (190)
Q Consensus 75 --------~~-----~-------~-------------------------~~~~~--------------~~~~~------- 88 (190)
.. + . ....+ ....+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 294 (402)
T PLN02894 215 ESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLA 294 (402)
T ss_pred CcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhc
Confidence 00 0 0 00000 00000
Q ss_pred -------------------hhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChh-H
Q 035673 89 -------------------IYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYP-D 148 (190)
Q Consensus 89 -------------------~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~ 148 (190)
..+....+.++++|+++++|++|.+.+ .....+.+......++++++++||+.+.+.+ +
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~ 373 (402)
T PLN02894 295 AKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSG 373 (402)
T ss_pred CCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHH
Confidence 001112356688999999999998664 6666666666545688999999998766655 5
Q ss_pred HHHHHHHHHHHhhcc
Q 035673 149 YIRHLCRFIQEMENM 163 (190)
Q Consensus 149 ~~~~i~~~l~~~~~~ 163 (190)
+.+.+.+|++.....
T Consensus 374 f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 374 FHSAVLYACRKYLSP 388 (402)
T ss_pred HHHHHHHHHHHhccC
Confidence 789999999988754
No 45
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.79 E-value=4.5e-19 Score=123.40 Aligned_cols=145 Identities=28% Similarity=0.359 Sum_probs=100.5
Q ss_pred CCCCCCCCCCCCCC-CCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhh-
Q 035673 1 YDYSGYGASTGKPS-ESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRV- 77 (190)
Q Consensus 1 ~D~~G~G~s~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~- 77 (190)
+|+||||.|..... .....++..+.+..+.+.++. ++++++|||+||.+++.++..+| +|+++++++|.......
T Consensus 30 ~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~ 107 (228)
T PF12697_consen 30 FDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI--KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSP 107 (228)
T ss_dssp EECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHH
T ss_pred EecCCccccccccccCCcchhhhhhhhhhccccccc--ccccccccccccccccccccccccccccceeecccccccccc
Confidence 58999999986553 122334444444444455543 78999999999999999999998 89999999987632110
Q ss_pred -------hhc---------------cccc---------c--------ch-------hhhcchhhhhcCCCceEEEEcCCC
Q 035673 78 -------LCH---------------VKFT---------F--------CC-------DIYKNINKIKKVKCPVLVIHGTED 111 (190)
Q Consensus 78 -------~~~---------------~~~~---------~--------~~-------~~~~~~~~~~~~~~P~l~i~g~~D 111 (190)
... ..+. . .. ........+..+++|+++++|++|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D 187 (228)
T PF12697_consen 108 SRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDD 187 (228)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTS
T ss_pred cccccchhhhhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCeEEeecCCC
Confidence 000 0000 0 00 011122456778999999999999
Q ss_pred ceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH
Q 035673 112 DVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD 148 (190)
Q Consensus 112 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 148 (190)
.+++.+..+.+.+.+++ .++++++++||+.+.+.++
T Consensus 188 ~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~ 223 (228)
T PF12697_consen 188 PIVPPESAEELADKLPN-AELVVIPGAGHFLFLEQPD 223 (228)
T ss_dssp SSSHHHHHHHHHHHSTT-EEEEEETTSSSTHHHHSHH
T ss_pred CCCCHHHHHHHHHHCCC-CEEEEECCCCCccHHHCHH
Confidence 99998888888887765 4889999999986655544
No 46
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.79 E-value=3.9e-18 Score=127.36 Aligned_cols=154 Identities=19% Similarity=0.288 Sum_probs=105.2
Q ss_pred CCCCCCCCCCCCCCC---CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh--
Q 035673 1 YDYSGYGASTGKPSE---SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG-- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~-- 74 (190)
+|+||||.|+..... ....+++.+.+..+.+++++ ++++++|||+||.+++.++..+| +|+++|+++|....
T Consensus 159 ~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~--~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~ 236 (383)
T PLN03084 159 FDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKS--DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEH 236 (383)
T ss_pred ECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCC--CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccc
Confidence 699999999865432 23445555555555566654 78999999999999999999999 99999999975321
Q ss_pred ------hhhh---------hc--c--------c---c----------c----------cchh-hhcch--------hhh-
Q 035673 75 ------LRVL---------CH--V--------K---F----------T----------FCCD-IYKNI--------NKI- 96 (190)
Q Consensus 75 ------~~~~---------~~--~--------~---~----------~----------~~~~-~~~~~--------~~~- 96 (190)
.... .. . . . . .... ..... ..+
T Consensus 237 ~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~ 316 (383)
T PLN03084 237 AKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMR 316 (383)
T ss_pred ccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHH
Confidence 0000 00 0 0 0 0 0000 00000 001
Q ss_pred -----hcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHH
Q 035673 97 -----KKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQ 158 (190)
Q Consensus 97 -----~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~ 158 (190)
.++++|+++++|+.|.+++.+..+.+.+.. ..++++++++||+.+.+.++ +.+.|.+|+.
T Consensus 317 ~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 317 SILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSS--QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred hhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhc--CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 246899999999999999998888877764 34888999999998777655 7799999885
No 47
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.79 E-value=1.9e-18 Score=112.99 Aligned_cols=114 Identities=32% Similarity=0.534 Sum_probs=92.3
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhc
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCH 80 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~ 80 (190)
+|+|++|.+. ...++.++++.+.+... +.++++++|||+||.+++.++...++++++|+++|+.+
T Consensus 32 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~v~~~v~~~~~~~------- 96 (145)
T PF12695_consen 32 FDYPGHGDSD-------GADAVERVLADIRAGYP-DPDRIILIGHSMGGAIAANLAARNPRVKAVVLLSPYPD------- 96 (145)
T ss_dssp ESCTTSTTSH-------HSHHHHHHHHHHHHHHC-TCCEEEEEEETHHHHHHHHHHHHSTTESEEEEESESSG-------
T ss_pred EecCCCCccc-------hhHHHHHHHHHHHhhcC-CCCcEEEEEEccCcHHHHHHhhhccceeEEEEecCccc-------
Confidence 4778888762 23367777777755444 67899999999999999999998889999999999411
Q ss_pred cccccchhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcC
Q 035673 81 VKFTFCCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHC 141 (190)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~ 141 (190)
...+...++|+++++|++|.+++.+..+++++.++...+++++++++|+
T Consensus 97 ------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 2455678889999999999999999999999999977789999999995
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.78 E-value=2.8e-18 Score=123.55 Aligned_cols=157 Identities=18% Similarity=0.222 Sum_probs=103.9
Q ss_pred CCCCCCCCCCCCCC-CCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhh--
Q 035673 1 YDYSGYGASTGKPS-ESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRV-- 77 (190)
Q Consensus 1 ~D~~G~G~s~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~-- 77 (190)
+|+||||.|.+... ...+.+|+.++++++++... ..++++++||||||.+++.++...++++++|+++|+......
T Consensus 63 ~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~ 141 (274)
T TIGR03100 63 FDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQA 141 (274)
T ss_pred eCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccch
Confidence 69999999976532 23456789999999987641 126799999999999999998765689999999997432110
Q ss_pred ------hh-----cccc-c-c-------------chh---hh--------------cchhhhhcCCCceEEEEcCCCcee
Q 035673 78 ------LC-----HVKF-T-F-------------CCD---IY--------------KNINKIKKVKCPVLVIHGTEDDVV 114 (190)
Q Consensus 78 ------~~-----~~~~-~-~-------------~~~---~~--------------~~~~~~~~~~~P~l~i~g~~D~~v 114 (190)
.. ...+ . . ... .+ .....+..+++|+++++|..|...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~ 221 (274)
T TIGR03100 142 ASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTA 221 (274)
T ss_pred HHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhH
Confidence 00 0000 0 0 000 00 001345567899999999999876
Q ss_pred echh-----HHHHHHHhC-CCCceEEecCCCcCCCC-Ch-hHHHHHHHHHHH
Q 035673 115 NWLH-----GNKLWKMAR-DPYEPLWIKGGGHCNLE-LY-PDYIRHLCRFIQ 158 (190)
Q Consensus 115 ~~~~-----~~~~~~~~~-~~~~~~~~~~~~H~~~~-~~-~~~~~~i~~~l~ 158 (190)
+.-. ...+.+.+. ...++..+++++|+... .. +++.+.|.+||+
T Consensus 222 ~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 222 QEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 4211 133444443 34578889999997633 33 357799999985
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.78 E-value=3.2e-18 Score=126.30 Aligned_cols=158 Identities=18% Similarity=0.258 Sum_probs=102.3
Q ss_pred CCCCCCCCCCCCCCC-------CchhhhHHHHHHHHHHHh-----------------CCC-CCcEEEEEEccChHHHHHH
Q 035673 1 YDYSGYGASTGKPSE-------SNTYADIEAVYQCLQTEY-----------------GVS-QEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~-------~~~~~d~~~~~~~~~~~~-----------------~~~-~~~~~l~G~S~Gg~~a~~~ 55 (190)
+|+||||.|.+.... ....+|+...++.+.+.. ... ..+++++||||||.+++.+
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 599999998854221 223456666666655410 012 3589999999999999998
Q ss_pred HhhcC---------ccceeeecCCcchhh----------h--------hh--hccccc-----------cchh-------
Q 035673 56 ASKLP---------RLRGVVLHSGILSGL----------R--------VL--CHVKFT-----------FCCD------- 88 (190)
Q Consensus 56 a~~~~---------~v~~~v~~~~~~~~~----------~--------~~--~~~~~~-----------~~~~------- 88 (190)
+..++ .++++|+++|+.... . .+ ....+. ...+
T Consensus 160 ~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~ 239 (332)
T TIGR01607 160 LELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKF 239 (332)
T ss_pred HHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCcc
Confidence 86542 488999888753100 0 00 000000 0000
Q ss_pred -------------hhcc----hhhhhcC--CCceEEEEcCCCceeechhHHHHHHHhCC-CCceEEecCCCcCCCCCh--
Q 035673 89 -------------IYKN----INKIKKV--KCPVLVIHGTEDDVVNWLHGNKLWKMARD-PYEPLWIKGGGHCNLELY-- 146 (190)
Q Consensus 89 -------------~~~~----~~~~~~~--~~P~l~i~g~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~-- 146 (190)
.+.. ...+..+ ++|+++++|++|.+++++.++.+++.+.. ..++.++++++|..+.+.
T Consensus 240 ~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~ 319 (332)
T TIGR01607 240 RYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGN 319 (332)
T ss_pred ccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCH
Confidence 0000 1123345 68999999999999999999998887653 357888999999876653
Q ss_pred hHHHHHHHHHHH
Q 035673 147 PDYIRHLCRFIQ 158 (190)
Q Consensus 147 ~~~~~~i~~~l~ 158 (190)
+++.+.+.+||+
T Consensus 320 ~~v~~~i~~wL~ 331 (332)
T TIGR01607 320 EEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHHHhh
Confidence 568899999985
No 50
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.77 E-value=6.3e-18 Score=125.87 Aligned_cols=155 Identities=20% Similarity=0.229 Sum_probs=104.8
Q ss_pred CCCCC--CCCCCCC---CC--------CCchhhhHHHHHHHHHHHhCCCCCc-EEEEEEccChHHHHHHHhhcC-cccee
Q 035673 1 YDYSG--YGASTGK---PS--------ESNTYADIEAVYQCLQTEYGVSQED-LILYGQSVGSGPTLHLASKLP-RLRGV 65 (190)
Q Consensus 1 ~D~~G--~G~s~~~---~~--------~~~~~~d~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~~-~v~~~ 65 (190)
+|+|| ||.|... +. .....+|..+.+..+.+++++ ++ ++++||||||.+++.++..+| +++++
T Consensus 78 ~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~l 155 (351)
T TIGR01392 78 SNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI--EQIAAVVGGSMGGMQALEWAIDYPERVRAI 155 (351)
T ss_pred ecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheE
Confidence 69999 5655421 10 123456766666667777766 67 999999999999999999999 89999
Q ss_pred eecCCcchh------hh-----hhhc------------------c-------------------ccc-------------
Q 035673 66 VLHSGILSG------LR-----VLCH------------------V-------------------KFT------------- 84 (190)
Q Consensus 66 v~~~~~~~~------~~-----~~~~------------------~-------------------~~~------------- 84 (190)
|++++.... +. .... . .+.
T Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 235 (351)
T TIGR01392 156 VVLATSARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGF 235 (351)
T ss_pred EEEccCCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCccccccccccc
Confidence 998864310 00 0000 0 000
Q ss_pred -------cc-----------------------hhhhc-------chhhhhcCCCceEEEEcCCCceeechhHHHHHHHhC
Q 035673 85 -------FC-----------------------CDIYK-------NINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMAR 127 (190)
Q Consensus 85 -------~~-----------------------~~~~~-------~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~ 127 (190)
.. ...++ ....++++++|+++|+|++|.++|++.++.+.+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~ 315 (351)
T TIGR01392 236 DTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALP 315 (351)
T ss_pred CccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHh
Confidence 00 00000 013456788999999999999999999999999887
Q ss_pred CCCceE-----EecCCCcCCCCCh-hHHHHHHHHHHH
Q 035673 128 DPYEPL-----WIKGGGHCNLELY-PDYIRHLCRFIQ 158 (190)
Q Consensus 128 ~~~~~~-----~~~~~~H~~~~~~-~~~~~~i~~~l~ 158 (190)
+. ++. +++++||..+.+. +++.+.|.+||+
T Consensus 316 ~~-~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 316 AA-GLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred hc-CCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 65 333 5578999875555 457799999973
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.76 E-value=1.5e-17 Score=122.56 Aligned_cols=158 Identities=17% Similarity=0.218 Sum_probs=104.5
Q ss_pred CCCCCCCCCCCCCC---CCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCCcchh
Q 035673 1 YDYSGYGASTGKPS---ESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGILSG 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~~~~ 74 (190)
+|+||||.++.... .....+|+..+++++.++++ ..+++++||||||.+++.++..++ .+.+++++++..+.
T Consensus 93 ~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 93 MHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML 170 (324)
T ss_pred EeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH
Confidence 58999997754321 13457899999999998874 378999999999998888887764 38888888875321
Q ss_pred hhh----------hhc-------------------ccccc----c--------------------------hhhhcchhh
Q 035673 75 LRV----------LCH-------------------VKFTF----C--------------------------CDIYKNINK 95 (190)
Q Consensus 75 ~~~----------~~~-------------------~~~~~----~--------------------------~~~~~~~~~ 95 (190)
... ... ..... . +...+....
T Consensus 171 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~ 250 (324)
T PRK10985 171 EACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPL 250 (324)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHH
Confidence 100 000 00000 0 000011235
Q ss_pred hhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCCh----hH-HH-HHHHHHHHHhh
Q 035673 96 IKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELY----PD-YI-RHLCRFIQEME 161 (190)
Q Consensus 96 ~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~----~~-~~-~~i~~~l~~~~ 161 (190)
++++++|+++++|++|++++.+....+.+..+ ..++++++++||+.+.+. +. +. +.+.+|+....
T Consensus 251 l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 251 LNQIRKPTLIIHAKDDPFMTHEVIPKPESLPP-NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred HhCCCCCEEEEecCCCCCCChhhChHHHHhCC-CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 67789999999999999999887776654443 347788899999854431 23 33 77888886554
No 52
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.76 E-value=1.4e-18 Score=114.96 Aligned_cols=155 Identities=19% Similarity=0.248 Sum_probs=109.6
Q ss_pred CCCCCCCCCCCCCCC---CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcc--h-
Q 035673 1 YDYSGYGASTGKPSE---SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGIL--S- 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~--~- 73 (190)
+|-||+|.|.++... +-+.+|...+++.++.. +.+++.|+|+|-||..++..|++++ .|..++.+++-. +
T Consensus 77 wDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL---k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~ 153 (277)
T KOG2984|consen 77 WDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL---KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNH 153 (277)
T ss_pred ECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh---CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecc
Confidence 589999999865443 33456888888766544 5589999999999999999999998 888888877521 1
Q ss_pred -------hhhhhh----c--c---------cccc----chhhhc----------chhhhhcCCCceEEEEcCCCceeech
Q 035673 74 -------GLRVLC----H--V---------KFTF----CCDIYK----------NINKIKKVKCPVLVIHGTEDDVVNWL 117 (190)
Q Consensus 74 -------~~~~~~----~--~---------~~~~----~~~~~~----------~~~~~~~~~~P~l~i~g~~D~~v~~~ 117 (190)
+++... + . .+.. +.+..+ ....+.+++||++|++|+.|++++..
T Consensus 154 ~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~ 233 (277)
T KOG2984|consen 154 LGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDP 233 (277)
T ss_pred hhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCC
Confidence 111110 0 0 0000 000000 12456789999999999999999988
Q ss_pred hHHHHHHHhCCCCceEEecCCCcCCCC-ChhHHHHHHHHHHHH
Q 035673 118 HGNKLWKMARDPYEPLWIKGGGHCNLE-LYPDYIRHLCRFIQE 159 (190)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~ 159 (190)
++-.+....+.. ++.++|.++|.+.. ..+++...+.+|++.
T Consensus 234 hv~fi~~~~~~a-~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 234 HVCFIPVLKSLA-KVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred Cccchhhhcccc-eEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 877666665554 89999999998654 445688999999975
No 53
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.75 E-value=8.4e-17 Score=115.83 Aligned_cols=155 Identities=15% Similarity=0.171 Sum_probs=99.4
Q ss_pred CCCCCCCCCCCCCCC-CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch--h--
Q 035673 1 YDYSGYGASTGKPSE-SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS--G-- 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~--~-- 74 (190)
+|+||||.|...+.. ..+.+++..+.+++.+ +. ..++++++||||||.+++.++..+| +|+++|++++... +
T Consensus 51 ~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~-l~-~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~ 128 (273)
T PLN02211 51 IDLKSAGIDQSDADSVTTFDEYNKPLIDFLSS-LP-ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ 128 (273)
T ss_pred ecccCCCCCCCCcccCCCHHHHHHHHHHHHHh-cC-CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCC
Confidence 699999988644333 2333334444444443 32 1378999999999999999999888 8999999977431 0
Q ss_pred -hhh-------hh---cc-------------ccccc---------hhhhc-----------------ch------hhhhc
Q 035673 75 -LRV-------LC---HV-------------KFTFC---------CDIYK-----------------NI------NKIKK 98 (190)
Q Consensus 75 -~~~-------~~---~~-------------~~~~~---------~~~~~-----------------~~------~~~~~ 98 (190)
... .. .. ..... +.... .. .....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (273)
T PLN02211 129 TDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGD 208 (273)
T ss_pred HHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccc
Confidence 000 00 00 00000 00000 00 01123
Q ss_pred C-CCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHHH
Q 035673 99 V-KCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQE 159 (190)
Q Consensus 99 ~-~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~~ 159 (190)
+ ++|+++|.|++|..+|++..+.+.+.++.. +++.++ +||..+.+.++ +.+.|.+....
T Consensus 209 ~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~-~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 209 IDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS-QVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred cCccceEEEEeCCCCCCCHHHHHHHHHhCCcc-EEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 4 689999999999999999999999888765 777786 89987666554 66777766543
No 54
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.74 E-value=9.8e-18 Score=132.72 Aligned_cols=146 Identities=23% Similarity=0.215 Sum_probs=113.6
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhcccc--c----------
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKF--T---------- 84 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~--~---------- 84 (190)
...+|+.+.++++.+...+|+++++|+|+|+||++++.++.+.+.+++.+...+..+.+........ .
T Consensus 452 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (620)
T COG1506 452 VDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGP 531 (620)
T ss_pred ccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhcCCHHHhCCCc
Confidence 4578999999988777778889999999999999999999999888888888876654443322111 1
Q ss_pred ----cchhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCC---CCceEEecCCCcCCCCC--hhHHHHHHHH
Q 035673 85 ----FCCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWIKGGGHCNLEL--YPDYIRHLCR 155 (190)
Q Consensus 85 ----~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~--~~~~~~~i~~ 155 (190)
..+....+.....++++|+|+|||+.|..|+.+++..+++.++. +++++++|+.+|.+... ..+.++.+.+
T Consensus 532 ~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~ 611 (620)
T COG1506 532 PEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILD 611 (620)
T ss_pred ccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHH
Confidence 11223344556778999999999999999999999999998764 36788899999986542 2347789999
Q ss_pred HHHHhhc
Q 035673 156 FIQEMEN 162 (190)
Q Consensus 156 ~l~~~~~ 162 (190)
|+++++.
T Consensus 612 ~~~~~~~ 618 (620)
T COG1506 612 WFKRHLK 618 (620)
T ss_pred HHHHHhc
Confidence 9988764
No 55
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.73 E-value=4.2e-17 Score=107.13 Aligned_cols=139 Identities=21% Similarity=0.256 Sum_probs=112.2
Q ss_pred CCCCCCCCCCCCCCC-CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhh
Q 035673 1 YDYSGYGASTGKPSE-SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLC 79 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~ 79 (190)
||+||.|.|.+.... .+-.+|..++++|++.+.. +.....+.|+|+|+.+++.+|.+.|.....+.++|..+..+
T Consensus 66 fNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~d--- 141 (210)
T COG2945 66 FNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYD--- 141 (210)
T ss_pred ecccccccccCcccCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchh---
Confidence 689999999987665 4567899999999999863 22234789999999999999999987788888887765111
Q ss_pred ccccccchhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHH
Q 035673 80 HVKFTFCCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQ 158 (190)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~ 158 (190)
...+....+|.++++|+.|.++++....++.+. ...+++.+++++||+......+.+.+.+|+.
T Consensus 142 -------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 142 -------------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES--IKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred -------------hhhccCCCCCceeEecChhhhhcHHHHHHhhcC--CCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 123455678999999999999999888888776 3347888999999998888888899999985
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.73 E-value=9.3e-17 Score=109.43 Aligned_cols=129 Identities=18% Similarity=0.287 Sum_probs=87.7
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhc---c--------ccccchh
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCH---V--------KFTFCCD 88 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~---~--------~~~~~~~ 88 (190)
+++.+.++.+.++++. ++++++||||||.+++.++..+| . .+|+++|..+....... . .+.....
T Consensus 45 ~~~~~~l~~l~~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~-~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (190)
T PRK11071 45 ADAAELLESLVLEHGG--DPLGLVGSSLGGYYATWLSQCFM-L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESR 120 (190)
T ss_pred HHHHHHHHHHHHHcCC--CCeEEEEECHHHHHHHHHHHHcC-C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHH
Confidence 3555666666666644 78999999999999999999998 3 45778876653222110 0 0110001
Q ss_pred hhcc-----hhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHH
Q 035673 89 IYKN-----INKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQ 158 (190)
Q Consensus 89 ~~~~-----~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~ 158 (190)
.... ...+ ...+|+++++|++|++||++.+.++++.. +.++++|++|.+. ..+++.+.+.+|+.
T Consensus 121 ~~~d~~~~~~~~i-~~~~~v~iihg~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f~-~~~~~~~~i~~fl~ 189 (190)
T PRK11071 121 HIYDLKVMQIDPL-ESPDLIWLLQQTGDEVLDYRQAVAYYAAC----RQTVEEGGNHAFV-GFERYFNQIVDFLG 189 (190)
T ss_pred HHHHHHhcCCccC-CChhhEEEEEeCCCCcCCHHHHHHHHHhc----ceEEECCCCcchh-hHHHhHHHHHHHhc
Confidence 1100 0112 25678899999999999999999999843 5677899999763 33678888988874
No 57
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.72 E-value=1.7e-16 Score=119.32 Aligned_cols=143 Identities=20% Similarity=0.227 Sum_probs=99.6
Q ss_pred hhhhHHHHHHHHHHHhCCCCCc-EEEEEEccChHHHHHHHhhcC-ccceeeecCCcchh------h-----hhhhc----
Q 035673 18 TYADIEAVYQCLQTEYGVSQED-LILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSG------L-----RVLCH---- 80 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~------~-----~~~~~---- 80 (190)
..++..+.+..+.+++++ ++ ++++||||||.+++.++..+| +|+++|++++.... + .....
T Consensus 128 ~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 205 (379)
T PRK00175 128 TIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDW 205 (379)
T ss_pred CHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCC
Confidence 456666666677777766 66 589999999999999999999 99999998864210 0 00000
Q ss_pred ---------------------------c-------ccc---------------cchh------------h----------
Q 035673 81 ---------------------------V-------KFT---------------FCCD------------I---------- 89 (190)
Q Consensus 81 ---------------------------~-------~~~---------------~~~~------------~---------- 89 (190)
. .+. .... .
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 0 000 0000 0
Q ss_pred -----hc--------chhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCC---CceEEec-CCCcCCCCCh-hHHHH
Q 035673 90 -----YK--------NINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDP---YEPLWIK-GGGHCNLELY-PDYIR 151 (190)
Q Consensus 90 -----~~--------~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~---~~~~~~~-~~~H~~~~~~-~~~~~ 151 (190)
++ ....+.++++|+|+|+|++|.++|++.++.+.+.++.. .++++++ ++||..+.+. +++.+
T Consensus 286 ~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~ 365 (379)
T PRK00175 286 RALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGR 365 (379)
T ss_pred HHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHH
Confidence 00 12335678999999999999999999999999888764 2566664 8999865554 45789
Q ss_pred HHHHHHHHhhc
Q 035673 152 HLCRFIQEMEN 162 (190)
Q Consensus 152 ~i~~~l~~~~~ 162 (190)
.|.+||++...
T Consensus 366 ~L~~FL~~~~~ 376 (379)
T PRK00175 366 LVRAFLERAAR 376 (379)
T ss_pred HHHHHHHhhhh
Confidence 99999988643
No 58
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.72 E-value=1.2e-16 Score=137.41 Aligned_cols=158 Identities=20% Similarity=0.262 Sum_probs=106.0
Q ss_pred CCCCCCCCCCCCCC-------CCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcc
Q 035673 1 YDYSGYGASTGKPS-------ESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGIL 72 (190)
Q Consensus 1 ~D~~G~G~s~~~~~-------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~ 72 (190)
+|+||||.|..... .....+++.+.+..+.++++. ++++++||||||.+++.++.++| +|++++++++..
T Consensus 1403 ~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~--~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1403 IDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP--GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred EcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC--CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 69999999875321 122345555555555556643 78999999999999999999999 999999887531
Q ss_pred hh-------hhh---------------------hhccc----c---c----cchhh---------------------hcc
Q 035673 73 SG-------LRV---------------------LCHVK----F---T----FCCDI---------------------YKN 92 (190)
Q Consensus 73 ~~-------~~~---------------------~~~~~----~---~----~~~~~---------------------~~~ 92 (190)
.. .+. +.... . . ..... .+.
T Consensus 1481 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl 1560 (1655)
T PLN02980 1481 GLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSL 1560 (1655)
T ss_pred ccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchH
Confidence 10 000 00000 0 0 00000 001
Q ss_pred hhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCC-----------CceEEecCCCcCCCCChh-HHHHHHHHHHHHh
Q 035673 93 INKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDP-----------YEPLWIKGGGHCNLELYP-DYIRHLCRFIQEM 160 (190)
Q Consensus 93 ~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~-----------~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~~ 160 (190)
...+.++++|+|+++|++|..++ ..+.++.+.+++. .++++++++||..+.+.+ ++.+.|.+||.+.
T Consensus 1561 ~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1561 WEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred HHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 13467789999999999999875 5667777766542 368899999998766655 4779999999976
Q ss_pred h
Q 035673 161 E 161 (190)
Q Consensus 161 ~ 161 (190)
.
T Consensus 1640 ~ 1640 (1655)
T PLN02980 1640 H 1640 (1655)
T ss_pred c
Confidence 5
No 59
>PRK11460 putative hydrolase; Provisional
Probab=99.71 E-value=1.6e-16 Score=111.61 Aligned_cols=120 Identities=19% Similarity=0.179 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccccccchhhhcchhhhhcCC
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKVK 100 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (190)
+.+.++++.+.++++.++++++|||+||.+++.++..+| .+.+++.+++..... ......+
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------~~~~~~~ 148 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------PETAPTA 148 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc------------------cccccCC
Confidence 444556666677777789999999999999999998888 566677776643210 0112357
Q ss_pred CceEEEEcCCCceeechhHHHHHHHhCC---CCceEEecCCCcCCCCChhHHHHHHHHHHHHhhc
Q 035673 101 CPVLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWIKGGGHCNLELYPDYIRHLCRFIQEMEN 162 (190)
Q Consensus 101 ~P~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~~~ 162 (190)
+|++++||++|+++|.+.++++.+.+.. ..+++++++++|.. .++..+.+.+||.+.+.
T Consensus 149 ~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i---~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 149 TTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI---DPRLMQFALDRLRYTVP 210 (232)
T ss_pred CcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC---CHHHHHHHHHHHHHHcc
Confidence 8999999999999999999988887753 34667789999954 45777788888877663
No 60
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.69 E-value=9.7e-17 Score=117.05 Aligned_cols=139 Identities=22% Similarity=0.305 Sum_probs=103.7
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhcccc-----c---------
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKF-----T--------- 84 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~-----~--------- 84 (190)
+.|...+++++.+..++|.++|++.|.|+||.+++.+|+..++|++++...|+...++....... .
T Consensus 156 ~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~ 235 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWR 235 (320)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCccchhhhhhcCCccccHHHHHHHHhcc
Confidence 46899999999999888999999999999999999999999999999999998765543221110 0
Q ss_pred -----------cchhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHH-HHH
Q 035673 85 -----------FCCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDY-IRH 152 (190)
Q Consensus 85 -----------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~-~~~ 152 (190)
.....++.....+.+++|+++..|-.|.+||+......++.++.++++.+++..+| +..+++ .+.
T Consensus 236 d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~H---e~~~~~~~~~ 312 (320)
T PF05448_consen 236 DPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGH---EYGPEFQEDK 312 (320)
T ss_dssp SCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--S---STTHHHHHHH
T ss_pred CCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCC---CchhhHHHHH
Confidence 01223444556678999999999999999999999999999998889999999999 555565 688
Q ss_pred HHHHHHHh
Q 035673 153 LCRFIQEM 160 (190)
Q Consensus 153 i~~~l~~~ 160 (190)
..+||.++
T Consensus 313 ~~~~l~~~ 320 (320)
T PF05448_consen 313 QLNFLKEH 320 (320)
T ss_dssp HHHHHHH-
T ss_pred HHHHHhcC
Confidence 88998763
No 61
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.69 E-value=7.6e-16 Score=115.41 Aligned_cols=141 Identities=16% Similarity=0.164 Sum_probs=98.9
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEE-EEEEccChHHHHHHHhhcC-ccceeeecCCcch--hh---------hh-h----
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLI-LYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS--GL---------RV-L---- 78 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~--~~---------~~-~---- 78 (190)
...+|+.+.+..+.+++++ +++. ++||||||++++.++.++| +++++|++++... .. +. +
T Consensus 141 ~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp 218 (389)
T PRK06765 141 VTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDP 218 (389)
T ss_pred CcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCC
Confidence 4566777777777788876 6775 9999999999999999999 8999998864211 00 00 0
Q ss_pred ---------------------------------hccccccc----h-------------h-----------hh-------
Q 035673 79 ---------------------------------CHVKFTFC----C-------------D-----------IY------- 90 (190)
Q Consensus 79 ---------------------------------~~~~~~~~----~-------------~-----------~~------- 90 (190)
....+... . . .+
T Consensus 219 ~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~ 298 (389)
T PRK06765 219 NWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLY 298 (389)
T ss_pred CCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHH
Confidence 00000000 0 0 00
Q ss_pred ---------------cchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCC---CCceEEecC-CCcCCCCCh-hHHH
Q 035673 91 ---------------KNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWIKG-GGHCNLELY-PDYI 150 (190)
Q Consensus 91 ---------------~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~-~~H~~~~~~-~~~~ 150 (190)
+....+.++++|+++|+|+.|.++|++.++++.+.++. ..+++++++ .||..+.+. +++.
T Consensus 299 l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~ 378 (389)
T PRK06765 299 LAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFE 378 (389)
T ss_pred HHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHH
Confidence 01224557899999999999999999999999888863 357788885 899866554 5677
Q ss_pred HHHHHHHHH
Q 035673 151 RHLCRFIQE 159 (190)
Q Consensus 151 ~~i~~~l~~ 159 (190)
+.|.+||++
T Consensus 379 ~~I~~FL~~ 387 (389)
T PRK06765 379 KKIYEFLNR 387 (389)
T ss_pred HHHHHHHcc
Confidence 999999864
No 62
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.67 E-value=8.4e-16 Score=114.46 Aligned_cols=156 Identities=16% Similarity=0.194 Sum_probs=107.1
Q ss_pred CCCCCCCCCCCCCCCCchh-hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhh-
Q 035673 1 YDYSGYGASTGKPSESNTY-ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRV- 77 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~- 77 (190)
+|++|+|.+.......++. +++.++++++.+..+. ++++++||||||.+++.+++.+| +++++++++|+.+....
T Consensus 100 ~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~--~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~ 177 (350)
T TIGR01836 100 IDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKL--DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPG 177 (350)
T ss_pred EeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCC--CcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCC
Confidence 4899999876443333343 3588899999998854 78999999999999999999988 89999998875431000
Q ss_pred -------------------------h-------hcc-cc-------------------------ccchhhhc--------
Q 035673 78 -------------------------L-------CHV-KF-------------------------TFCCDIYK-------- 91 (190)
Q Consensus 78 -------------------------~-------~~~-~~-------------------------~~~~~~~~-------- 91 (190)
. ... .. .+..+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~ 257 (350)
T TIGR01836 178 NMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQ 257 (350)
T ss_pred chhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHH
Confidence 0 000 00 00000000
Q ss_pred --------------------chhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCC-CceEEecCCCcCCC-CC---h
Q 035673 92 --------------------NINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDP-YEPLWIKGGGHCNL-EL---Y 146 (190)
Q Consensus 92 --------------------~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~-~~---~ 146 (190)
....+.++++|+++++|++|.++++..++.+.+.++.. .++++++ +||..+ .. .
T Consensus 258 ~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~ 336 (350)
T TIGR01836 258 FVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQ 336 (350)
T ss_pred HHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhH
Confidence 00125568999999999999999999999999988753 3555666 688642 22 2
Q ss_pred hHHHHHHHHHHHH
Q 035673 147 PDYIRHLCRFIQE 159 (190)
Q Consensus 147 ~~~~~~i~~~l~~ 159 (190)
+++++.+.+||.+
T Consensus 337 ~~v~~~i~~wl~~ 349 (350)
T TIGR01836 337 KEVPPAIGKWLQA 349 (350)
T ss_pred hhhhHHHHHHHHh
Confidence 5688999999865
No 63
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.67 E-value=4.8e-16 Score=108.26 Aligned_cols=110 Identities=35% Similarity=0.515 Sum_probs=79.2
Q ss_pred CCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccccccchhhhcchhhhhc-CCCceEEEEcCCC
Q 035673 34 GVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKK-VKCPVLVIHGTED 111 (190)
Q Consensus 34 ~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D 111 (190)
+++.++++++|+|+||++++.++.++| .+.+++.+|++....... ...... -++|++++||.+|
T Consensus 101 ~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~--------------~~~~~~~~~~pi~~~hG~~D 166 (216)
T PF02230_consen 101 GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL--------------EDRPEALAKTPILIIHGDED 166 (216)
T ss_dssp T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--------------HCCHCCCCTS-EEEEEETT-
T ss_pred CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--------------cccccccCCCcEEEEecCCC
Confidence 578899999999999999999999998 899999999876422111 011111 2789999999999
Q ss_pred ceeechhHHHHHHHhCCC---CceEEecCCCcCCCCChhHHHHHHHHHHHHh
Q 035673 112 DVVNWLHGNKLWKMARDP---YEPLWIKGGGHCNLELYPDYIRHLCRFIQEM 160 (190)
Q Consensus 112 ~~v~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~ 160 (190)
+++|.+.++...+.+... .++..|++.|| ...++..+.+.+||+++
T Consensus 167 ~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH---~i~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 167 PVVPFEWAEKTAEFLKAAGANVEFHEYPGGGH---EISPEELRDLREFLEKH 215 (216)
T ss_dssp SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SS---S--HHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHhcCCCEEEEEcCCCCC---CCCHHHHHHHHHHHhhh
Confidence 999999888888776543 46778999999 45567888899999875
No 64
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.65 E-value=1.1e-15 Score=106.62 Aligned_cols=127 Identities=22% Similarity=0.210 Sum_probs=89.6
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhccccccchhhhcchhhhhc
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKK 98 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (190)
..|+.+++++++++..++.++|.++|+|+||.+++.++...+.+++++.+.|... .........+
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~---------------~~~~~~~~~~ 143 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSP---------------PPPPLEDAPK 143 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSS---------------GGGHHHHGGG
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCC---------------CCcchhhhcc
Confidence 3467778888888876677899999999999999999998878999998887100 1112234667
Q ss_pred CCCceEEEEcCCCceeechhHHHHHHHh---CCCCceEEecCCCcCCCCCh---------hHHHHHHHHHHHHh
Q 035673 99 VKCPVLVIHGTEDDVVNWLHGNKLWKMA---RDPYEPLWIKGGGHCNLELY---------PDYIRHLCRFIQEM 160 (190)
Q Consensus 99 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~~~---------~~~~~~i~~~l~~~ 160 (190)
+++|+++++|++|+.++.+..+.+.+.+ ....++++|+|++|.+.... .+.++.+.+|++++
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999888887776 33467888999999753221 23667888888765
No 65
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.64 E-value=3.8e-15 Score=99.69 Aligned_cols=154 Identities=23% Similarity=0.306 Sum_probs=108.2
Q ss_pred CCCCCCCCCCCCCCC---CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhh
Q 035673 1 YDYSGYGASTGKPSE---SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRV 77 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~ 77 (190)
||++|-|+|++...+ ..-.+|+..+++++... ...--+|+|||-||.+++.++.+++.+.-++.+++-.+....
T Consensus 68 fDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~---nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~ 144 (269)
T KOG4667|consen 68 FDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS---NRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNG 144 (269)
T ss_pred EEecCCCCcCCccccCcccchHHHHHHHHHHhccC---ceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcc
Confidence 699999999987544 23357888888888653 223457899999999999999999888888888875543322
Q ss_pred hh-c-----------c----------ccccchhhhcc--------hhhhhc--CCCceEEEEcCCCceeechhHHHHHHH
Q 035673 78 LC-H-----------V----------KFTFCCDIYKN--------INKIKK--VKCPVLVIHGTEDDVVNWLHGNKLWKM 125 (190)
Q Consensus 78 ~~-~-----------~----------~~~~~~~~~~~--------~~~~~~--~~~P~l~i~g~~D~~v~~~~~~~~~~~ 125 (190)
.. + . .+...+..... .+...+ .+||+|-+||..|.+||.+.+.++.+.
T Consensus 145 I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~ 224 (269)
T KOG4667|consen 145 INERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKI 224 (269)
T ss_pred hhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHh
Confidence 20 0 0 00000000000 011122 369999999999999999999999999
Q ss_pred hCCCCceEEecCCCcCCCCChhHHHHHHHHHHH
Q 035673 126 ARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQ 158 (190)
Q Consensus 126 ~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~ 158 (190)
+++ .++.+++|+.|.+.....+.......|.+
T Consensus 225 i~n-H~L~iIEgADHnyt~~q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 225 IPN-HKLEIIEGADHNYTGHQSQLVSLGLEFIK 256 (269)
T ss_pred ccC-CceEEecCCCcCccchhhhHhhhcceeEE
Confidence 998 59999999999876655555555555543
No 66
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.63 E-value=2.5e-15 Score=100.28 Aligned_cols=130 Identities=18% Similarity=0.186 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHH-hhcC-ccceeeecCCcchhhhhhhccccccchhhhcchhhhhc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLA-SKLP-RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKK 98 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a-~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (190)
++.++++.+.+.+....+++++||||+|+..+++++ .... +|+++++++|+.......... ....+... ....
T Consensus 38 ~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~----~~~~f~~~-p~~~ 112 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPP----ELDGFTPL-PRDP 112 (171)
T ss_dssp -HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTC----GGCCCTTS-HCCH
T ss_pred CHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhh----hccccccC-cccc
Confidence 678888888888764456799999999999999999 4444 899999999997531111000 11111111 1223
Q ss_pred CCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHH
Q 035673 99 VKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFI 157 (190)
Q Consensus 99 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l 157 (190)
+.+|.+++.+++|+++|.+.++++.+.+.. +++.++++||+...+.-.-+..+.+.|
T Consensus 113 l~~~~~viaS~nDp~vp~~~a~~~A~~l~a--~~~~~~~~GHf~~~~G~~~~p~~~~~l 169 (171)
T PF06821_consen 113 LPFPSIVIASDNDPYVPFERAQRLAQRLGA--ELIILGGGGHFNAASGFGPWPEGLDLL 169 (171)
T ss_dssp HHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGGGTHSS-HHHHHHH
T ss_pred cCCCeEEEEcCCCCccCHHHHHHHHHHcCC--CeEECCCCCCcccccCCCchHHHHHHh
Confidence 456779999999999999999999999974 789999999986544333344444444
No 67
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.60 E-value=1.3e-14 Score=99.41 Aligned_cols=152 Identities=18% Similarity=0.290 Sum_probs=97.6
Q ss_pred CCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhC--CCCCcEEEEEEccChHHHHHHHhhcC----ccceeeecCCcch--
Q 035673 2 DYSGYGASTGKPSESNTYADIEAVYQCLQTEYG--VSQEDLILYGQSVGSGPTLHLASKLP----RLRGVVLHSGILS-- 73 (190)
Q Consensus 2 D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~----~v~~~v~~~~~~~-- 73 (190)
.|||+|.--..+ ...|+....+.+...+. ....++.++||||||++|.++|.+.. .+.++++.+.-..
T Consensus 40 qlPGR~~r~~ep----~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~ 115 (244)
T COG3208 40 QLPGRGDRFGEP----LLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHY 115 (244)
T ss_pred cCCCcccccCCc----ccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCC
Confidence 578887654333 34566666666666654 34468999999999999999998753 2445554442111
Q ss_pred ----------------hhhhhhccc-------------cccchhhhcchh-----hhhcCCCceEEEEcCCCceeechhH
Q 035673 74 ----------------GLRVLCHVK-------------FTFCCDIYKNIN-----KIKKVKCPVLVIHGTEDDVVNWLHG 119 (190)
Q Consensus 74 ----------------~~~~~~~~~-------------~~~~~~~~~~~~-----~~~~~~~P~l~i~g~~D~~v~~~~~ 119 (190)
.+..+.... .......+...+ .-..++||+.++.|++|..|+.+..
T Consensus 116 ~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~ 195 (244)
T COG3208 116 DRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDEL 195 (244)
T ss_pred cccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHH
Confidence 000000000 000000011000 1135789999999999999999999
Q ss_pred HHHHHHhCCCCceEEecCCCcCCCCChh-HHHHHHHHHHH
Q 035673 120 NKLWKMARDPYEPLWIKGGGHCNLELYP-DYIRHLCRFIQ 158 (190)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~ 158 (190)
..|.+..++..++.+++| ||+++.... ++...|.+.+.
T Consensus 196 ~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 196 GAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 999999998888999975 998876654 56676766664
No 68
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.60 E-value=1.6e-14 Score=100.13 Aligned_cols=143 Identities=21% Similarity=0.264 Sum_probs=86.0
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhh-------------hhc------
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRV-------------LCH------ 80 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~-------------~~~------ 80 (190)
+-+.++++||.++..++.++|.|+|.|.||-+|+.+|..+|.|+++|.++|..-.+.. ...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 4577899999999988889999999999999999999999999999999983211110 000
Q ss_pred ---c---ccccchhhh--c----chhhhhcCCCceEEEEcCCCceeechhHH-HHHHHhCC-----CCceEEecCCCcCC
Q 035673 81 ---V---KFTFCCDIY--K----NINKIKKVKCPVLVIHGTEDDVVNWLHGN-KLWKMARD-----PYEPLWIKGGGHCN 142 (190)
Q Consensus 81 ---~---~~~~~~~~~--~----~~~~~~~~~~P~l~i~g~~D~~v~~~~~~-~~~~~~~~-----~~~~~~~~~~~H~~ 142 (190)
. ......... . ..-.+.++++|+|++.|++|.+.|..... .+.+++.. ..+++.|+++||..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred ecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 0 000000000 0 01135678999999999999998765444 44444433 24667799999962
Q ss_pred C-------C----------------------ChhHHHHHHHHHHHHhhc
Q 035673 143 L-------E----------------------LYPDYIRHLCRFIQEMEN 162 (190)
Q Consensus 143 ~-------~----------------------~~~~~~~~i~~~l~~~~~ 162 (190)
. . ...+.|+.+.+||++++.
T Consensus 164 ~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 164 EPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp -STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 0 112477889999988764
No 69
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.59 E-value=5.5e-15 Score=109.33 Aligned_cols=157 Identities=20% Similarity=0.257 Sum_probs=98.3
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhh---
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLR--- 76 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~--- 76 (190)
+|.||-|.|...+...+...-...+++++.+...+|.++|+++|.|+||++|+++|..++ +++++|..+|....+-
T Consensus 224 vDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~ 303 (411)
T PF06500_consen 224 VDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDP 303 (411)
T ss_dssp E--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-H
T ss_pred EccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccH
Confidence 489999999765544444345678899999998899999999999999999999998765 9999999998643221
Q ss_pred -hhhcc----------ccccc----------hhhhcc--hhhh--hcCCCceEEEEcCCCceeechhHHHHHHHhCCCCc
Q 035673 77 -VLCHV----------KFTFC----------CDIYKN--INKI--KKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYE 131 (190)
Q Consensus 77 -~~~~~----------~~~~~----------~~~~~~--~~~~--~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~ 131 (190)
..... ++... ...+.. ...+ ++..+|+|.+.+++|+++|.+..+-+...-... +
T Consensus 304 ~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g-k 382 (411)
T PF06500_consen 304 EWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG-K 382 (411)
T ss_dssp HHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--E
T ss_pred HHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC-c
Confidence 10000 00000 011111 1123 566799999999999999998887776654443 6
Q ss_pred eEEecCCC-cCCCCChhHHHHHHHHHHHHhh
Q 035673 132 PLWIKGGG-HCNLELYPDYIRHLCRFIQEME 161 (190)
Q Consensus 132 ~~~~~~~~-H~~~~~~~~~~~~i~~~l~~~~ 161 (190)
...++... | ...++....+.+||++.+
T Consensus 383 ~~~~~~~~~~---~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 383 ALRIPSKPLH---MGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp EEEE-SSSHH---HHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCccc---cchHHHHHHHHHHHHHhc
Confidence 66666433 5 444578889999998753
No 70
>PRK05855 short chain dehydrogenase; Validated
Probab=99.59 E-value=1e-14 Score=115.42 Aligned_cols=62 Identities=23% Similarity=0.158 Sum_probs=48.9
Q ss_pred cCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHHHhh
Q 035673 98 KVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQEME 161 (190)
Q Consensus 98 ~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~~~~ 161 (190)
.+++|+++++|++|.+++......+.+.++.. .+++++ +||+.+.+.++ +.+.|.+|+.+..
T Consensus 231 ~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~-~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 231 YTDVPVQLIVPTGDPYVRPALYDDLSRWVPRL-WRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred CccCceEEEEeCCCcccCHHHhccccccCCcc-eEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 37899999999999999998888777666543 555665 68987666654 7799999998754
No 71
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.59 E-value=2.2e-14 Score=110.74 Aligned_cols=138 Identities=18% Similarity=0.254 Sum_probs=94.2
Q ss_pred CCCCCCCCCCCCCCCCchh-hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHH----HHHhhc-C-ccceeeecCCcch
Q 035673 1 YDYSGYGASTGKPSESNTY-ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTL----HLASKL-P-RLRGVVLHSGILS 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-~-~v~~~v~~~~~~~ 73 (190)
+|+||+|.+.......++. +++.++++.+.+..+. ++++++||||||.++. .+++.+ + ++++++++++..+
T Consensus 226 iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~--~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 226 ISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGE--KQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred EECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCC--CCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 5899999886544333333 4688999999988854 8899999999999852 244554 5 7999998886432
Q ss_pred hh------------------------------------hhhhc----------------ccccc-----chhh-------
Q 035673 74 GL------------------------------------RVLCH----------------VKFTF-----CCDI------- 89 (190)
Q Consensus 74 ~~------------------------------------~~~~~----------------~~~~~-----~~~~------- 89 (190)
.- ..+.. ....+ ..+.
T Consensus 304 f~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~ 383 (532)
T TIGR01838 304 FSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKM 383 (532)
T ss_pred CCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHH
Confidence 00 00000 00000 0000
Q ss_pred ---------------------hcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcC
Q 035673 90 ---------------------YKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHC 141 (190)
Q Consensus 90 ---------------------~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~ 141 (190)
......+..+++|+++++|++|.++|++.+..+.+.+++. +.++++++||.
T Consensus 384 ~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~-~~~vL~~sGHi 455 (532)
T TIGR01838 384 HNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGP-KTFVLGESGHI 455 (532)
T ss_pred HHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCC-EEEEECCCCCc
Confidence 0011356778999999999999999999999988888754 67788899996
No 72
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.58 E-value=3.1e-14 Score=101.52 Aligned_cols=159 Identities=17% Similarity=0.226 Sum_probs=103.4
Q ss_pred CCCCCCCCCCCCCC---CCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCCcchh
Q 035673 1 YDYSGYGASTGKPS---ESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGILSG 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~~~~ 74 (190)
+++|||+.+..... ..++.+|+..+++++++.. ...++..+|.|+||.+...+..... .+.+.+.+|.+.+.
T Consensus 110 ~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~--~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl 187 (345)
T COG0429 110 FHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARF--PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL 187 (345)
T ss_pred EecccccCCcccCcceecccchhHHHHHHHHHHHhC--CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH
Confidence 57899997764322 2567799999999999976 5589999999999966665555442 45555555432221
Q ss_pred ----------hh-hhh------------ccc-----------------------------------ccc---chhhhcch
Q 035673 75 ----------LR-VLC------------HVK-----------------------------------FTF---CCDIYKNI 93 (190)
Q Consensus 75 ----------~~-~~~------------~~~-----------------------------------~~~---~~~~~~~~ 93 (190)
+. ... ..+ +.- .+......
T Consensus 188 ~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~ 267 (345)
T COG0429 188 EACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSL 267 (345)
T ss_pred HHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcccc
Confidence 00 000 000 000 01111223
Q ss_pred hhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCC----hhH-HH-HHHHHHHHHhh
Q 035673 94 NKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLEL----YPD-YI-RHLCRFIQEME 161 (190)
Q Consensus 94 ~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~-~~-~~i~~~l~~~~ 161 (190)
..+.+|.+|++||++.+|++++++...+.....+....+.+.+.+||..+.. .+. +. +.+.+|++...
T Consensus 268 ~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 268 PLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred ccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 5677899999999999999999877666665555556777788899974332 233 33 78888887654
No 73
>COG0400 Predicted esterase [General function prediction only]
Probab=99.57 E-value=3.9e-14 Score=96.75 Aligned_cols=120 Identities=29% Similarity=0.447 Sum_probs=93.5
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccccccchhhhcchhhhhcC
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKV 99 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (190)
.+.+.++.+.+.++++.++++++|+|.||++++.+...+| .++++++++|+...... ..-..-
T Consensus 82 ~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~----------------~~~~~~ 145 (207)
T COG0400 82 KLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE----------------LLPDLA 145 (207)
T ss_pred HHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------cccccC
Confidence 4556667777778899999999999999999999999999 89999999987641110 111234
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCC---CCceEEecCCCcCCCCChhHHHHHHHHHHHHh
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWIKGGGHCNLELYPDYIRHLCRFIQEM 160 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~ 160 (190)
.+|+++++|+.|++||...+.++.+.+.+ .+...+++ .|| +-.++..+.+.+|+.+.
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH---~i~~e~~~~~~~wl~~~ 205 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGH---EIPPEELEAARSWLANT 205 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCC---cCCHHHHHHHHHHHHhc
Confidence 58999999999999999988888775543 34566676 799 55667788888898764
No 74
>PLN02872 triacylglycerol lipase
Probab=99.56 E-value=1.9e-14 Score=107.98 Aligned_cols=67 Identities=15% Similarity=0.234 Sum_probs=53.4
Q ss_pred hhhcC--CCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCC---CCC-hhHHHHHHHHHHHHhh
Q 035673 95 KIKKV--KCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCN---LEL-YPDYIRHLCRFIQEME 161 (190)
Q Consensus 95 ~~~~~--~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~---~~~-~~~~~~~i~~~l~~~~ 161 (190)
.+.++ ++|+++++|++|.+++++.++++.+.++...++..+++.+|.. ..+ ++++.+.|.+|+++..
T Consensus 318 ~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 318 DLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred CcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 34556 5799999999999999999999999988655777899999962 233 3457899999998653
No 75
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.55 E-value=2.1e-13 Score=109.96 Aligned_cols=162 Identities=19% Similarity=0.194 Sum_probs=111.3
Q ss_pred CCCCCCCCCCCCCCC--CchhhhHHHHHHHHHHHh--------------CCCCCcEEEEEEccChHHHHHHHhhcC-ccc
Q 035673 1 YDYSGYGASTGKPSE--SNTYADIEAVYQCLQTEY--------------GVSQEDLILYGQSVGSGPTLHLASKLP-RLR 63 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~--~~~~~d~~~~~~~~~~~~--------------~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~ 63 (190)
+|.||.|.|++.... ..-.+|..++|+|+.... .+...+|.++|.|+||.+++.+|...+ .++
T Consensus 285 ~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~Lk 364 (767)
T PRK05371 285 VSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLE 364 (767)
T ss_pred EcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcce
Confidence 489999999987543 234568999999998421 123579999999999999999988766 899
Q ss_pred eeeecCCcchhhhhhhc-----------------------c---------c----------------------cccchhh
Q 035673 64 GVVLHSGILSGLRVLCH-----------------------V---------K----------------------FTFCCDI 89 (190)
Q Consensus 64 ~~v~~~~~~~~~~~~~~-----------------------~---------~----------------------~~~~~~~ 89 (190)
++|..+++.+....... . . +.-.++.
T Consensus 365 AIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~ 444 (767)
T PRK05371 365 TIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDD 444 (767)
T ss_pred EEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHh
Confidence 99998876542211100 0 0 0000011
Q ss_pred hcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCC---CCceEEecCCCcCCCCC--hhHHHHHHHHHHHHhhcc
Q 035673 90 YKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWIKGGGHCNLEL--YPDYIRHLCRFIQEMENM 163 (190)
Q Consensus 90 ~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~--~~~~~~~i~~~l~~~~~~ 163 (190)
.+....+.++++|+++++|..|..+++.++.++++.+.. +.++ ++..++|..... ..++.+.+.+|+..++..
T Consensus 445 rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL-~l~~g~H~~~~~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 445 RNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKL-FLHQGGHVYPNNWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred CCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEE-EEeCCCccCCCchhHHHHHHHHHHHHHhcccc
Confidence 122245567899999999999999999989888887753 3344 444568864332 235778899999887653
No 76
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.55 E-value=3.1e-14 Score=98.52 Aligned_cols=139 Identities=20% Similarity=0.182 Sum_probs=108.9
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhcccc---------------
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKF--------------- 83 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~--------------- 83 (190)
+.|+..+++.+.....++.++|.+.|.|.||.+++.+++..|+++++++.-|+.+.++.......
T Consensus 157 ~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~ 236 (321)
T COG3458 157 FLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFLSDFPRAIELATEGPYDEIQTYFKRHD 236 (321)
T ss_pred hHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhcccccccccccchhheeecccCcHHHHHHHHHhcC
Confidence 46888899999888888999999999999999999999999999999999998876544322110
Q ss_pred ------ccchhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHH-HHHHHH
Q 035673 84 ------TFCCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYI-RHLCRF 156 (190)
Q Consensus 84 ------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~-~~i~~~ 156 (190)
......++.......++.|+|+..|-.|++||+...-.+++.+...+.+.+++--+|. .-+.+. +.+..|
T Consensus 237 ~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe---~~p~~~~~~~~~~ 313 (321)
T COG3458 237 PKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHE---GGPGFQSRQQVHF 313 (321)
T ss_pred chHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccc---cCcchhHHHHHHH
Confidence 0112233444456678999999999999999999999999999988888999887884 334433 457777
Q ss_pred HHHh
Q 035673 157 IQEM 160 (190)
Q Consensus 157 l~~~ 160 (190)
+...
T Consensus 314 l~~l 317 (321)
T COG3458 314 LKIL 317 (321)
T ss_pred HHhh
Confidence 7654
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.53 E-value=7.7e-13 Score=95.47 Aligned_cols=133 Identities=17% Similarity=0.209 Sum_probs=83.5
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhh---------hhccccccchhhhcch
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRV---------LCHVKFTFCCDIYKNI 93 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 93 (190)
++...+.+.++++.++++++||||||.+++.++..+| .++++++++|+.+.... ....... .....+..
T Consensus 124 ~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 202 (275)
T TIGR02821 124 ELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQKAFSAYLGADEA-AWRSYDAS 202 (275)
T ss_pred HHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHHHHHHHhccccc-chhhcchH
Confidence 3444455556677789999999999999999999999 89999999987543210 0000000 00011111
Q ss_pred hhhh--cCCCceEEEEcCCCceeec-hhHHHHHHHhC---CCCceEEecCCCcCCCCChhHHHHHHHHHHH
Q 035673 94 NKIK--KVKCPVLVIHGTEDDVVNW-LHGNKLWKMAR---DPYEPLWIKGGGHCNLELYPDYIRHLCRFIQ 158 (190)
Q Consensus 94 ~~~~--~~~~P~l~i~g~~D~~v~~-~~~~~~~~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~ 158 (190)
.... ....|+++.+|+.|+.++. .+...+.+.+. .+.++.++++.+|.+... ..+.....+|..
T Consensus 203 ~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~-~~~~~~~~~~~~ 272 (275)
T TIGR02821 203 LLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFI-ASFIADHLRHHA 272 (275)
T ss_pred HHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhH-HHhHHHHHHHHH
Confidence 1111 2457999999999999998 45555555443 345777889999965432 334444444443
No 78
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.53 E-value=9.9e-14 Score=98.95 Aligned_cols=157 Identities=17% Similarity=0.224 Sum_probs=100.5
Q ss_pred CCCCCCCCCCCCCCC--CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccCh-HHHHHHHhhcC-ccceeeecC--Cc-ch
Q 035673 1 YDYSGYGASTGKPSE--SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGS-GPTLHLASKLP-RLRGVVLHS--GI-LS 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~~-~v~~~v~~~--~~-~~ 73 (190)
.|.|.||.|+..... ....+|+...++.+..... ..++.++|||||| .+++..+...| .+..+|+.. |. ..
T Consensus 86 vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~--~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~ 163 (315)
T KOG2382|consen 86 VDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTR--LDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVG 163 (315)
T ss_pred EecccCCCCccccccCHHHHHHHHHHHHHHcccccc--cCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCC
Confidence 489999999854332 3344566666666654332 3689999999999 66666667777 666666543 31 00
Q ss_pred --------hhhhh--------------------------------hcccc---------ccc---------hhh---hcc
Q 035673 74 --------GLRVL--------------------------------CHVKF---------TFC---------CDI---YKN 92 (190)
Q Consensus 74 --------~~~~~--------------------------------~~~~~---------~~~---------~~~---~~~ 92 (190)
.+..+ ...++ .+. ++. ...
T Consensus 164 ~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~ 243 (315)
T KOG2382|consen 164 RSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSY 243 (315)
T ss_pred cccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcc
Confidence 00000 00000 000 000 000
Q ss_pred hhhh--hcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHHHh
Q 035673 93 INKI--KKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQEM 160 (190)
Q Consensus 93 ~~~~--~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~~~ 160 (190)
...+ .....|++++.|.++.+++.++-.++.+.++. .++..++++||+.+.+.|+ +.+.|.+|+.+.
T Consensus 244 ~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 244 WADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred cccccccccccceeEEecCCCCCcChhHHHHHHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 1112 44578999999999999998888888877776 5899999999998777665 779999998764
No 79
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.52 E-value=1.8e-13 Score=95.13 Aligned_cols=128 Identities=15% Similarity=0.223 Sum_probs=83.0
Q ss_pred CCCCCCCCCCCCC---------CCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCC
Q 035673 1 YDYSGYGASTGKP---------SESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSG 70 (190)
Q Consensus 1 ~D~~G~G~s~~~~---------~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~ 70 (190)
+|++|++.+.... .......|+..+++++.+.++++.++++|+|||+||.+++.++..+| .+.+++.+++
T Consensus 49 Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g 128 (212)
T TIGR01840 49 PEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAG 128 (212)
T ss_pred cCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecC
Confidence 5788876443211 01223567888999999988888889999999999999999999999 7888887776
Q ss_pred cchhhh-hh----hcc----ccccchhhhcc-hhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCC
Q 035673 71 ILSGLR-VL----CHV----KFTFCCDIYKN-INKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARD 128 (190)
Q Consensus 71 ~~~~~~-~~----~~~----~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~ 128 (190)
...... .. ... ....+.+.... .........|++++||++|.+||++.++.+.+.+..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 129 LPYGEASSSISATPQMCTAATAASVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred CcccccccchhhHhhcCCCCCHHHHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 532110 00 000 00000000000 011122334578999999999999999998887754
No 80
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.50 E-value=6.8e-13 Score=93.23 Aligned_cols=129 Identities=22% Similarity=0.257 Sum_probs=101.5
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhccccccchhhhcchhhh
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKI 96 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (190)
....|+.+.++++..+..++.++|.++|+||||.+++.++...|++++.+.+.|...... ....
T Consensus 91 ~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~----------------~~~~ 154 (236)
T COG0412 91 EVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADD----------------TADA 154 (236)
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCc----------------cccc
Confidence 345689999999998876678899999999999999999999888999998876532111 1125
Q ss_pred hcCCCceEEEEcCCCceeechhHHHHHHHhCCC---CceEEecCCCcCCCCC--------h----hHHHHHHHHHHHHhh
Q 035673 97 KKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDP---YEPLWIKGGGHCNLEL--------Y----PDYIRHLCRFIQEME 161 (190)
Q Consensus 97 ~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~~--------~----~~~~~~i~~~l~~~~ 161 (190)
.++++|+++.+++.|..+|......+.+.+... ..+.+++++.|.+... + ++.++.+.+|+++.+
T Consensus 155 ~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 155 PKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred ccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 588999999999999999998888888766543 5678899988965522 1 247788888888765
No 81
>PRK10115 protease 2; Provisional
Probab=99.50 E-value=5.2e-13 Score=106.92 Aligned_cols=145 Identities=17% Similarity=0.141 Sum_probs=107.6
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhcccccc----------
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTF---------- 85 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~---------- 85 (190)
..++|+.++++++.+.-.++++++.+.|.|.||+++..++.++| .++++|+..|+.+....+.......
T Consensus 503 ~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~ 582 (686)
T PRK10115 503 NTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGN 582 (686)
T ss_pred CcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCC
Confidence 56789999999999886678899999999999999999999888 9999999999988765432111100
Q ss_pred --------chhhhcchhhhhcCCCc-eEEEEcCCCceeechhHHHHHHHhCC---CCceEEe---cCCCcCCCCChhHHH
Q 035673 86 --------CCDIYKNINKIKKVKCP-VLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWI---KGGGHCNLELYPDYI 150 (190)
Q Consensus 86 --------~~~~~~~~~~~~~~~~P-~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~---~~~~H~~~~~~~~~~ 150 (190)
....+.+..++.+++.| +|+++|.+|..|++.++.++..++.. +.+++++ +++||.......+.+
T Consensus 583 p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~ 662 (686)
T PRK10115 583 PQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSY 662 (686)
T ss_pred CCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHH
Confidence 11123455677778889 56779999999999999999987753 3466777 899998544443333
Q ss_pred ---HHHHHHHHHhh
Q 035673 151 ---RHLCRFIQEME 161 (190)
Q Consensus 151 ---~~i~~~l~~~~ 161 (190)
.....||-..+
T Consensus 663 ~~~A~~~aFl~~~~ 676 (686)
T PRK10115 663 EGVAMEYAFLIALA 676 (686)
T ss_pred HHHHHHHHHHHHHh
Confidence 33455665554
No 82
>PLN02442 S-formylglutathione hydrolase
Probab=99.50 E-value=5.1e-13 Score=96.68 Aligned_cols=108 Identities=16% Similarity=0.184 Sum_probs=72.7
Q ss_pred CCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhh---------hhcccc--ccchhhhcchhhhhcCCCc
Q 035673 35 VSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRV---------LCHVKF--TFCCDIYKNINKIKKVKCP 102 (190)
Q Consensus 35 ~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~---------~~~~~~--~~~~~~~~~~~~~~~~~~P 102 (190)
++.++++|+||||||..++.++.++| .+++++.++|+.+.... ...... ....+.......+...++|
T Consensus 140 ~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~p 219 (283)
T PLN02442 140 LDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSAT 219 (283)
T ss_pred cCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCC
Confidence 36689999999999999999999999 88999999987642110 000000 0001112222334456899
Q ss_pred eEEEEcCCCceeech-hHHHHHHHh---CCCCceEEecCCCcCC
Q 035673 103 VLVIHGTEDDVVNWL-HGNKLWKMA---RDPYEPLWIKGGGHCN 142 (190)
Q Consensus 103 ~l~i~g~~D~~v~~~-~~~~~~~~~---~~~~~~~~~~~~~H~~ 142 (190)
+++++|++|.+++.. .++.+.+.+ +.+.++.++++.+|..
T Consensus 220 vli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~ 263 (283)
T PLN02442 220 ILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSY 263 (283)
T ss_pred EEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccH
Confidence 999999999998863 345555443 3446788899999953
No 83
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.48 E-value=8.6e-13 Score=97.27 Aligned_cols=160 Identities=18% Similarity=0.152 Sum_probs=102.2
Q ss_pred CCCCCCCCCCCCCC---CCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC----ccceeeecCCcch
Q 035673 1 YDYSGYGASTGKPS---ESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP----RLRGVVLHSGILS 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~----~v~~~v~~~~~~~ 73 (190)
++.||+|.+.-... ...+.+|+.++++++++.+ +..++..+|.||||.+.+.++.+.. -+.++.+++|+-.
T Consensus 160 fN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~--P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 160 FNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRY--PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred ECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchh
Confidence 46799887764322 3678899999999999998 5579999999999999999998764 3455556666431
Q ss_pred h--hhhhhcc-----------------------------------------------------cccc---chhhhcchhh
Q 035673 74 G--LRVLCHV-----------------------------------------------------KFTF---CCDIYKNINK 95 (190)
Q Consensus 74 ~--~~~~~~~-----------------------------------------------------~~~~---~~~~~~~~~~ 95 (190)
. -+.+... .+.- .+........
T Consensus 238 ~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~ 317 (409)
T KOG1838|consen 238 LAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNY 317 (409)
T ss_pred hhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhh
Confidence 0 0000000 0000 1111223457
Q ss_pred hhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCCh----h-HHHHH-HHHHHHHhhc
Q 035673 96 IKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELY----P-DYIRH-LCRFIQEMEN 162 (190)
Q Consensus 96 ~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~----~-~~~~~-i~~~l~~~~~ 162 (190)
+.+|++|+++|.+.+|+++|....-.-..+.+...-+++...+||..+.+. . .+.+. +.+|+.....
T Consensus 318 v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 318 VDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred cccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 778999999999999999997633332222233334455567899643222 2 24455 8888876654
No 84
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.46 E-value=2.3e-13 Score=94.66 Aligned_cols=157 Identities=18% Similarity=0.233 Sum_probs=91.9
Q ss_pred CCCCCCCCCCCCCCCCchhh-hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc--CccceeeecCCcchhh--
Q 035673 1 YDYSGYGASTGKPSESNTYA-DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL--PRLRGVVLHSGILSGL-- 75 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--~~v~~~v~~~~~~~~~-- 75 (190)
+|+||||++.-.....-..+ -..++...+.+.++-.+.+|+++||||||.+|...|... |.+.+++++.-.-...
T Consensus 108 ~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVVEgtAme 187 (343)
T KOG2564|consen 108 LDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVVEGTAME 187 (343)
T ss_pred eeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEEEEechHHHH
Confidence 69999999876544422222 233344445555544567899999999999999887654 4778888777432100
Q ss_pred -----------------------hhhhc----------------------c--cc----------ccchhhhcch-hhhh
Q 035673 76 -----------------------RVLCH----------------------V--KF----------TFCCDIYKNI-NKIK 97 (190)
Q Consensus 76 -----------------------~~~~~----------------------~--~~----------~~~~~~~~~~-~~~~ 97 (190)
.+..+ . .+ +++..+|... +.+-
T Consensus 188 AL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl 267 (343)
T KOG2564|consen 188 ALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFL 267 (343)
T ss_pred HHHHHHHHHhcCCccccchhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhh
Confidence 00000 0 00 0011111111 1222
Q ss_pred cCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHHHHHhh
Q 035673 98 KVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRFIQEME 161 (190)
Q Consensus 98 ~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~l~~~~ 161 (190)
...+|-++|.+..|.+-. +. ...++.+..++.+++..||+..++.|. +...+..|+.++.
T Consensus 268 ~~p~~klLilAg~d~LDk-dL---tiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 268 GLPVPKLLILAGVDRLDK-DL---TIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred CCCccceeEEecccccCc-ce---eeeeeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 356777777777665321 11 112334445888899999998888764 7788888887664
No 85
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.45 E-value=2.7e-12 Score=83.64 Aligned_cols=132 Identities=17% Similarity=0.247 Sum_probs=94.0
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccccccchhhhcchhhhhcC
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKV 99 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (190)
++.++++.+.+....-.+++++|+||+|+.+++.++.+.. .|.++++++|+.-....... .....+... ....+
T Consensus 42 ~~~dWi~~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~----~~~~tf~~~-p~~~l 116 (181)
T COG3545 42 VLDDWIARLEKEVNAAEGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRP----KHLMTFDPI-PREPL 116 (181)
T ss_pred CHHHHHHHHHHHHhccCCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccch----hhccccCCC-ccccC
Confidence 5666777777766545567999999999999999998876 89999999997643221100 011112221 22345
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCC----CCChhHHHHHHHHHHHH
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCN----LELYPDYIRHLCRFIQE 159 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~----~~~~~~~~~~i~~~l~~ 159 (190)
.-|.+++.+++|++++++.++.+.+.+.. .++....+||.. +..-++....+.+++.+
T Consensus 117 pfps~vvaSrnDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 117 PFPSVVVASRNDPYVSYEHAEDLANAWGS--ALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CCceeEEEecCCCCCCHHHHHHHHHhccH--hheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 67999999999999999999999999875 677888899974 33445655666666543
No 86
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.45 E-value=3.7e-12 Score=89.24 Aligned_cols=126 Identities=26% Similarity=0.375 Sum_probs=90.2
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcch----hhh
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILS----GLR 76 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~----~~~ 76 (190)
.+|||+|.+++.+.......+-...++.+.+.++++ ++++++|||.||-.|+.++..+| ..++++++|.-- +++
T Consensus 68 iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~-~~g~~lin~~G~r~HkgIr 145 (297)
T PF06342_consen 68 INYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHP-LHGLVLINPPGLRPHKGIR 145 (297)
T ss_pred eCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCc-cceEEEecCCccccccCcC
Confidence 379999999987776667778888899999999886 79999999999999999999997 679999998311 000
Q ss_pred h---------hhc-------------------ccccc---------------chhhhcchhhhhcCCCceEEEEcCCCce
Q 035673 77 V---------LCH-------------------VKFTF---------------CCDIYKNINKIKKVKCPVLVIHGTEDDV 113 (190)
Q Consensus 77 ~---------~~~-------------------~~~~~---------------~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 113 (190)
. ... .+..- ........+.+.+-++|+++++|.+|.+
T Consensus 146 p~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhL 225 (297)
T PF06342_consen 146 PLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHL 225 (297)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchh
Confidence 0 000 00000 0000112344555679999999999999
Q ss_pred eechhHHHHHHHhCC
Q 035673 114 VNWLHGNKLWKMARD 128 (190)
Q Consensus 114 v~~~~~~~~~~~~~~ 128 (190)
+..+-..++......
T Consensus 226 IEeeI~~E~a~~f~~ 240 (297)
T PF06342_consen 226 IEEEISFEFAMKFKG 240 (297)
T ss_pred hHHHHHHHHHHHhCC
Confidence 988877777665543
No 87
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=1e-12 Score=95.16 Aligned_cols=141 Identities=22% Similarity=0.194 Sum_probs=98.1
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEE-EEEEccChHHHHHHHhhcC-ccceeeecCCcch---------------------
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLI-LYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS--------------------- 73 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~--------------------- 73 (190)
..+.|...+...+.+++|+ +++. |+|-||||+.++.++..+| ++..++.++.-..
T Consensus 127 ~ti~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~ 204 (368)
T COG2021 127 ITIRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPD 204 (368)
T ss_pred ccHHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCC
Confidence 3456888888899999988 5555 9999999999999999999 8888887775110
Q ss_pred --------------hhhh-----------------hhcc-----cc-----cc---------------------------
Q 035673 74 --------------GLRV-----------------LCHV-----KF-----TF--------------------------- 85 (190)
Q Consensus 74 --------------~~~~-----------------~~~~-----~~-----~~--------------------------- 85 (190)
+++. .+.. .. .+
T Consensus 205 ~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ 284 (368)
T COG2021 205 WNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTR 284 (368)
T ss_pred ccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHH
Confidence 0000 0000 00 00
Q ss_pred chhhhcch-------hhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEe-cCCCcCC-CCChhHHHHHHHHH
Q 035673 86 CCDIYKNI-------NKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWI-KGGGHCN-LELYPDYIRHLCRF 156 (190)
Q Consensus 86 ~~~~~~~~-------~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~-~~~~H~~-~~~~~~~~~~i~~~ 156 (190)
..+.++.. ..++.+++|++++.-+.|.++|++..+...+.++....++++ ...||.. +.+.+.+...|..|
T Consensus 285 ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~f 364 (368)
T COG2021 285 ALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKF 364 (368)
T ss_pred HHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHH
Confidence 01111111 237779999999999999999999999999999887546555 4679964 34444566888888
Q ss_pred HHH
Q 035673 157 IQE 159 (190)
Q Consensus 157 l~~ 159 (190)
|+.
T Consensus 365 L~~ 367 (368)
T COG2021 365 LAL 367 (368)
T ss_pred hhc
Confidence 864
No 88
>PLN00021 chlorophyllase
Probab=99.42 E-value=8.4e-12 Score=91.20 Aligned_cols=134 Identities=15% Similarity=0.108 Sum_probs=86.2
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHh--------CCCCCcEEEEEEccChHHHHHHHhhcC------ccceee
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEY--------GVSQEDLILYGQSVGSGPTLHLASKLP------RLRGVV 66 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~--------~~~~~~~~l~G~S~Gg~~a~~~a~~~~------~v~~~v 66 (190)
+|++|++.+. .....++..++++++.+.+ .++.++++++||||||.+++.++..++ ++++++
T Consensus 85 pD~~g~~~~~----~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali 160 (313)
T PLN00021 85 PQLYTLAGPD----GTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALI 160 (313)
T ss_pred ecCCCcCCCC----chhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEE
Confidence 4667654321 1233456677777777632 235578999999999999999998875 478999
Q ss_pred ecCCcchhhhhhhccccccchhhhcchhhhhcCCCceEEEEcCCCc-----eee----ch-hHHHHHHHhCCCCceEEec
Q 035673 67 LHSGILSGLRVLCHVKFTFCCDIYKNINKIKKVKCPVLVIHGTEDD-----VVN----WL-HGNKLWKMARDPYEPLWIK 136 (190)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-----~v~----~~-~~~~~~~~~~~~~~~~~~~ 136 (190)
+++|......... ...... .......++.+|++++.+..|. .+| .. .-..+++.++.++.+.+++
T Consensus 161 ~ldPv~g~~~~~~--~~p~il---~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~ 235 (313)
T PLN00021 161 GLDPVDGTSKGKQ--TPPPVL---TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAK 235 (313)
T ss_pred eeccccccccccC--CCCccc---ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeec
Confidence 9998754221110 000011 1111222478999999998763 222 33 3377888888887888899
Q ss_pred CCCcCCC
Q 035673 137 GGGHCNL 143 (190)
Q Consensus 137 ~~~H~~~ 143 (190)
++||..+
T Consensus 236 ~~gH~~~ 242 (313)
T PLN00021 236 DYGHMDM 242 (313)
T ss_pred CCCccee
Confidence 9999754
No 89
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.40 E-value=9.2e-13 Score=93.88 Aligned_cols=72 Identities=28% Similarity=0.421 Sum_probs=59.0
Q ss_pred CCCCCCCCCCCCCCCC---chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh
Q 035673 1 YDYSGYGASTGKPSES---NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL 75 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~ 75 (190)
+|+||||.|.+..... .+.+|+..+++++++. + .++++++||||||.+++.++.++| +++++|+++|+.++.
T Consensus 62 ~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~--~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 62 IDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-G--HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred ECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-C--CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 6999999997654332 3567888888888765 3 378999999999999999999988 899999999987644
No 90
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.38 E-value=3e-12 Score=86.47 Aligned_cols=124 Identities=17% Similarity=0.183 Sum_probs=97.6
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhccccccchhhhcchhhhh
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIK 97 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (190)
...++..++++++.+. +..+|.++|++|||.++..+....+.+.+++.+-|-.. ....+.
T Consensus 102 ~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~------------------d~~D~~ 161 (242)
T KOG3043|consen 102 IWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFV------------------DSADIA 161 (242)
T ss_pred chhHHHHHHHHHHHcC--CcceeeEEEEeecceEEEEeeccchhheeeeEecCCcC------------------ChhHHh
Confidence 4578999999999664 56899999999999999999988888888887766432 134567
Q ss_pred cCCCceEEEEcCCCceeechhHHHHHHHhCCCC----ceEEecCCCcCCCC------Ch------hHHHHHHHHHHHHhh
Q 035673 98 KVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPY----EPLWIKGGGHCNLE------LY------PDYIRHLCRFIQEME 161 (190)
Q Consensus 98 ~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~----~~~~~~~~~H~~~~------~~------~~~~~~i~~~l~~~~ 161 (190)
++++|++++.++.|.++|+.....+.+.+.... .+.+|++.+|.++. .+ ++.++.+..|++.++
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 889999999999999999999888888877553 47889999996542 11 235577777777654
No 91
>PRK10162 acetyl esterase; Provisional
Probab=99.35 E-value=1.7e-11 Score=90.20 Aligned_cols=143 Identities=19% Similarity=0.227 Sum_probs=92.6
Q ss_pred chhhhHHHHHHHHHHH---hCCCCCcEEEEEEccChHHHHHHHhhc-------CccceeeecCCcchhhhhhh----ccc
Q 035673 17 NTYADIEAVYQCLQTE---YGVSQEDLILYGQSVGSGPTLHLASKL-------PRLRGVVLHSGILSGLRVLC----HVK 82 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~-------~~v~~~v~~~~~~~~~~~~~----~~~ 82 (190)
...+|+.++++++.++ ++++.++++|+|+|+||.+++.++... +.++++++++|+.+...... ...
T Consensus 130 ~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~ 209 (318)
T PRK10162 130 QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGV 209 (318)
T ss_pred CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCC
Confidence 3567888888888764 677888999999999999999988642 26889999998765311100 000
Q ss_pred c-cc-------chh--------hhcch-----hhhhcCCCceEEEEcCCCceeechhHHHHHHHhCC---CCceEEecCC
Q 035673 83 F-TF-------CCD--------IYKNI-----NKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWIKGG 138 (190)
Q Consensus 83 ~-~~-------~~~--------~~~~~-----~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~~ 138 (190)
. .+ ... ...+. ..+..--.|+++++|+.|++.+ ++..+.+.+.. .++++++++.
T Consensus 210 ~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~ 287 (318)
T PRK10162 210 WDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGT 287 (318)
T ss_pred ccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCC
Confidence 0 00 000 00000 1111223699999999999864 56666665543 3678889999
Q ss_pred CcCCCCC------hhHHHHHHHHHHHHhh
Q 035673 139 GHCNLEL------YPDYIRHLCRFIQEME 161 (190)
Q Consensus 139 ~H~~~~~------~~~~~~~i~~~l~~~~ 161 (190)
.|.+... ..+.++.+.+||++.+
T Consensus 288 ~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 288 LHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred ceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 9964322 2346677888887764
No 92
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.35 E-value=3.1e-12 Score=91.27 Aligned_cols=152 Identities=23% Similarity=0.332 Sum_probs=59.0
Q ss_pred CCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCC--CCCcEEEEEEccChHHHHHHHhhc------CccceeeecCCcchh
Q 035673 3 YSGYGASTGKPSESNTYADIEAVYQCLQTEYGV--SQEDLILYGQSVGSGPTLHLASKL------PRLRGVVLHSGILSG 74 (190)
Q Consensus 3 ~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~------~~v~~~v~~~~~~~~ 74 (190)
+.|+|.++- ....+|+.++++|++...+- ..++|+|+|||.|+.-+++++... +.|+++|+-+|+.+.
T Consensus 75 y~G~G~~SL----~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 75 YSGWGTSSL----DRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp BTTS-S--H----HHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred cCCcCcchh----hhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 345554432 24577899999999998421 458999999999999999998765 369999999996541
Q ss_pred h------------hhh----------------hcccc--------cc-------------chhhhcc-------hhhhhc
Q 035673 75 L------------RVL----------------CHVKF--------TF-------------CCDIYKN-------INKIKK 98 (190)
Q Consensus 75 ~------------~~~----------------~~~~~--------~~-------------~~~~~~~-------~~~~~~ 98 (190)
- ... ..... .. ..+.|.. ...+..
T Consensus 151 Ea~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~ 230 (303)
T PF08538_consen 151 EAILNFLGEREAYEELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGK 230 (303)
T ss_dssp TSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG
T ss_pred hHhhhcccchHHHHHHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhcc
Confidence 0 000 00000 00 0011111 135667
Q ss_pred CCCceEEEEcCCCceeechh-HHHHHHHhCCCC-------ceEEecCCCcCCCCChh-----HHHHHHHHHHH
Q 035673 99 VKCPVLVIHGTEDDVVNWLH-GNKLWKMARDPY-------EPLWIKGGGHCNLELYP-----DYIRHLCRFIQ 158 (190)
Q Consensus 99 ~~~P~l~i~g~~D~~v~~~~-~~~~~~~~~~~~-------~~~~~~~~~H~~~~~~~-----~~~~~i~~~l~ 158 (190)
+.+|+|++.+.+|++||... .+.+.+++.... .--++||+.|..-.... .+.+.+..||+
T Consensus 231 v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 231 VSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --S-EEEEEE--TT-----------------------------------------------------------
T ss_pred CCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 88999999999999998642 233333333211 22468999997543222 24566676663
No 93
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=7.4e-12 Score=100.93 Aligned_cols=162 Identities=19% Similarity=0.172 Sum_probs=115.5
Q ss_pred CCCCCCCCCCCCCC-----C--CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC--ccceeeecCCc
Q 035673 1 YDYSGYGASTGKPS-----E--SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP--RLRGVVLHSGI 71 (190)
Q Consensus 1 ~D~~G~G~s~~~~~-----~--~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~v~~~v~~~~~ 71 (190)
+|.||-|....... . ....+|...++.++.+..-+|.+++.|+|+|.||++++.++...+ -+++.+.++|+
T Consensus 564 vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPV 643 (755)
T KOG2100|consen 564 VDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPV 643 (755)
T ss_pred EcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecce
Confidence 37777765432211 1 224568888888888887789999999999999999999999987 45666999998
Q ss_pred chhhhh--hhcccc-------ccchhhhcchhhhhcCCCce-EEEEcCCCceeechhHHHHHHHhCCC---CceEEecCC
Q 035673 72 LSGLRV--LCHVKF-------TFCCDIYKNINKIKKVKCPV-LVIHGTEDDVVNWLHGNKLWKMARDP---YEPLWIKGG 138 (190)
Q Consensus 72 ~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~P~-l~i~g~~D~~v~~~~~~~~~~~~~~~---~~~~~~~~~ 138 (190)
.+.... ....++ ...+........+..++.|. |++||+.|..|+.+++..+++++... .++.++|+.
T Consensus 644 td~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde 723 (755)
T KOG2100|consen 644 TDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDE 723 (755)
T ss_pred eeeeeecccccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCC
Confidence 764311 001111 00122333445566677666 99999999999999999999877643 577889999
Q ss_pred CcCCCCCh--hHHHHHHHHHHHHhhc
Q 035673 139 GHCNLELY--PDYIRHLCRFIQEMEN 162 (190)
Q Consensus 139 ~H~~~~~~--~~~~~~i~~~l~~~~~ 162 (190)
.|...... ..+...+..|+.....
T Consensus 724 ~H~is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 724 NHGISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred CcccccccchHHHHHHHHHHHHHHcC
Confidence 99875544 4577999999986554
No 94
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.34 E-value=6.1e-11 Score=83.83 Aligned_cols=151 Identities=24% Similarity=0.324 Sum_probs=94.0
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch------
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS------ 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~------ 73 (190)
+|+||||.|. .. ..........+..+.+.++. .++.++|||+||.+++.++..+| .+++++++++...
T Consensus 56 ~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~ 130 (282)
T COG0596 56 PDLRGHGRSD-PA--GYSLSAYADDLAALLDALGL--EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEA 130 (282)
T ss_pred ecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCC--CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccC
Confidence 5999999997 11 11222224455555556654 55999999999999999999999 7999999885421
Q ss_pred -----hh----hh------hh---------ccc--cccc--------hhh----------------------------hc
Q 035673 74 -----GL----RV------LC---------HVK--FTFC--------CDI----------------------------YK 91 (190)
Q Consensus 74 -----~~----~~------~~---------~~~--~~~~--------~~~----------------------------~~ 91 (190)
.. .. .. ... .... ... ..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (282)
T COG0596 131 ALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLD 210 (282)
T ss_pred ccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccc
Confidence 00 00 00 000 0000 000 00
Q ss_pred --chhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhH-HHHHHHHH
Q 035673 92 --NINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPD-YIRHLCRF 156 (190)
Q Consensus 92 --~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~~ 156 (190)
.......+.+|+++++|.+|.+.+......+.+.++...++++++++||+...+.++ +.+.+.+|
T Consensus 211 ~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 278 (282)
T COG0596 211 RDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAF 278 (282)
T ss_pred cccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHH
Confidence 011234567999999999996666555455555555434788899999997766655 54666553
No 95
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.30 E-value=1.1e-10 Score=78.92 Aligned_cols=115 Identities=18% Similarity=0.310 Sum_probs=73.6
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhcc----c-------cccchhhhcchhhh----hcCC
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHV----K-------FTFCCDIYKNINKI----KKVK 100 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~----~~~~ 100 (190)
..+.+.++|.||||+.|..++.+++ +++ |+++|.......+... . +.+....+.....+ ..-.
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~ 134 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNP 134 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCC
Confidence 3356999999999999999999886 444 8888876654433211 1 11111111111111 1224
Q ss_pred CceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHH
Q 035673 101 CPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFI 157 (190)
Q Consensus 101 ~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l 157 (190)
.++++++++.|+++++..+...++ +. ..++.+|++|-+. ..++....|.+|+
T Consensus 135 ~~~lvll~~~DEvLd~~~a~~~~~---~~-~~~i~~ggdH~f~-~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 135 ERYLVLLQTGDEVLDYREAVAKYR---GC-AQIIEEGGDHSFQ-DFEEYLPQIIAFL 186 (187)
T ss_pred ccEEEEEecCCcccCHHHHHHHhc---Cc-eEEEEeCCCCCCc-cHHHHHHHHHHhh
Confidence 689999999999999966555443 33 4556678899553 3567778888886
No 96
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.30 E-value=4.7e-11 Score=99.84 Aligned_cols=66 Identities=20% Similarity=0.307 Sum_probs=54.5
Q ss_pred hhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCce-EEecCCCcCCC----CChhHHHHHHHHHHHHhhc
Q 035673 96 IKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEP-LWIKGGGHCNL----ELYPDYIRHLCRFIQEMEN 162 (190)
Q Consensus 96 ~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~----~~~~~~~~~i~~~l~~~~~ 162 (190)
++++++|+++++|++|.+++++.++.+.+.+++. ++ .+++++||+.+ ..+++++..+.+||.+...
T Consensus 293 L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a-~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 293 LADITCPVLAFVGEVDDIGQPASVRGIRRAAPNA-EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred hhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC-eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 6778999999999999999999999998888765 55 67789999743 2335688999999998753
No 97
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.29 E-value=6.1e-11 Score=93.42 Aligned_cols=72 Identities=24% Similarity=0.218 Sum_probs=59.4
Q ss_pred CCCCCCCCCCCCCCC--CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch
Q 035673 1 YDYSGYGASTGKPSE--SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~ 73 (190)
+|+||+|.|++.... ....+|+.++++++.++... ..+++++|+|+||.+++.++..+| .+++++..+++.+
T Consensus 59 ~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~-~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 59 QDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWC-DGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred EeccccccCCCceEecCcccchHHHHHHHHHHhCCCC-CCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 599999999875432 34567999999999887543 369999999999999999999887 8999998887654
No 98
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.26 E-value=3.8e-11 Score=84.86 Aligned_cols=137 Identities=20% Similarity=0.282 Sum_probs=92.4
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc------CccceeeecCCcchhhhhhhccc-c--------
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL------PRLRGVVLHSGILSGLRVLCHVK-F-------- 83 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------~~v~~~v~~~~~~~~~~~~~~~~-~-------- 83 (190)
...+..++.+|.+++++ +++-+|||||||..++.++..+ |++..+|.+++.+++........ .
T Consensus 86 a~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp 163 (255)
T PF06028_consen 86 AKWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGP 163 (255)
T ss_dssp HHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-B
T ss_pred HHHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCC
Confidence 45788899999999977 8999999999999999988764 47899999988777653321100 0
Q ss_pred ccchhhhcchhhh--hcC--CCceEEEEcC------CCceeechhHHHHHHHhCCC---CceEEec--CCCcCCCCChhH
Q 035673 84 TFCCDIYKNINKI--KKV--KCPVLVIHGT------EDDVVNWLHGNKLWKMARDP---YEPLWIK--GGGHCNLELYPD 148 (190)
Q Consensus 84 ~~~~~~~~~~~~~--~~~--~~P~l~i~g~------~D~~v~~~~~~~~~~~~~~~---~~~~~~~--~~~H~~~~~~~~ 148 (190)
......+...... ..+ ++.+|-|.|. .|..||...+..+...+.+. .+..++. ++.|..+.+.++
T Consensus 164 ~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~ 243 (255)
T PF06028_consen 164 KSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQ 243 (255)
T ss_dssp SS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHH
T ss_pred cccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHH
Confidence 0011111111111 122 4779999998 89999999888887777653 2334454 468988888899
Q ss_pred HHHHHHHHH
Q 035673 149 YIRHLCRFI 157 (190)
Q Consensus 149 ~~~~i~~~l 157 (190)
+.+.|.+||
T Consensus 244 V~~~I~~FL 252 (255)
T PF06028_consen 244 VDKLIIQFL 252 (255)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999997
No 99
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.26 E-value=6e-11 Score=91.41 Aligned_cols=123 Identities=18% Similarity=0.255 Sum_probs=84.2
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHH----HHhhcC--ccceeeecCCcchhhh-------------
Q 035673 16 SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLH----LASKLP--RLRGVVLHSGILSGLR------------- 76 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~----~a~~~~--~v~~~v~~~~~~~~~~------------- 76 (190)
.++.+.+.++++.+++..|. +++.++|+|+||.+++. +++.++ +|++++++..+.+.-.
T Consensus 268 dDYv~~i~~Ald~V~~~tG~--~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~ 345 (560)
T TIGR01839 268 STYVDALKEAVDAVRAITGS--RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTL 345 (560)
T ss_pred HHHHHHHHHHHHHHHHhcCC--CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHH
Confidence 34456788889999888754 88999999999999986 677776 5999987776433100
Q ss_pred ----h-------------------hhcc---------cc-----ccchh---------------------hhc-------
Q 035673 77 ----V-------------------LCHV---------KF-----TFCCD---------------------IYK------- 91 (190)
Q Consensus 77 ----~-------------------~~~~---------~~-----~~~~~---------------------~~~------- 91 (190)
. +... .+ ....+ .+.
T Consensus 346 ~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~p 425 (560)
T TIGR01839 346 EAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRP 425 (560)
T ss_pred HHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCC
Confidence 0 0000 00 00000 000
Q ss_pred -------chhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcC
Q 035673 92 -------NINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHC 141 (190)
Q Consensus 92 -------~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~ 141 (190)
..-.+++|++|++++.+++|.++|++.+....+.+.+.++++.. .+||.
T Consensus 426 G~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHI 481 (560)
T TIGR01839 426 DALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-NSGHI 481 (560)
T ss_pred CCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-CCCcc
Confidence 01256779999999999999999999999999988876555555 46885
No 100
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.26 E-value=6.4e-11 Score=80.56 Aligned_cols=154 Identities=16% Similarity=0.192 Sum_probs=93.5
Q ss_pred CCCCCCCCCCCCCCC------Cch-hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCc--
Q 035673 1 YDYSGYGASTGKPSE------SNT-YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGI-- 71 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~------~~~-~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~-- 71 (190)
+||||.|+|...... .++ ..|+..+++.+.+.. ...+...+|||+||.+.- ++..+++..+.......
T Consensus 63 ~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~g-L~~~~~k~~a~~vfG~gag 139 (281)
T COG4757 63 FDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALG-LLGQHPKYAAFAVFGSGAG 139 (281)
T ss_pred EecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeec-ccccCcccceeeEeccccc
Confidence 699999999865433 122 348999999998877 447899999999996544 44444544333332211
Q ss_pred chh----------------------------------------------hhhhhccc-cccchhhhc-chhhhhcCCCce
Q 035673 72 LSG----------------------------------------------LRVLCHVK-FTFCCDIYK-NINKIKKVKCPV 103 (190)
Q Consensus 72 ~~~----------------------------------------------~~~~~~~~-~~~~~~~~~-~~~~~~~~~~P~ 103 (190)
.++ ++.+++.. +.+....+. ..+....+.+|+
T Consensus 140 wsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi 219 (281)
T COG4757 140 WSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPI 219 (281)
T ss_pred cccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCce
Confidence 000 00001111 111111111 123456789999
Q ss_pred EEEEcCCCceeechhHHHHHHHhCCC-CceEEecC----CCcCCCCCh--hHHHHHHHHHH
Q 035673 104 LVIHGTEDDVVNWLHGNKLWKMARDP-YEPLWIKG----GGHCNLELY--PDYIRHLCRFI 157 (190)
Q Consensus 104 l~i~g~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~----~~H~~~~~~--~~~~~~i~~~l 157 (190)
+.+...+|+.+|+...+.+.+...+. .+...++. .||+-.... +..++++++|+
T Consensus 220 ~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 220 TFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred eeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 99999999999999988888765543 34444442 589754443 44667777775
No 101
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.24 E-value=1.2e-10 Score=83.94 Aligned_cols=139 Identities=22% Similarity=0.224 Sum_probs=90.0
Q ss_pred CCCCCCCCCCCCCCCC--chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhh
Q 035673 1 YDYSGYGASTGKPSES--NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRV 77 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~ 77 (190)
.|.||.|.|++..... .-.+|..++|+++.++. +...+|.++|.|++|..++.+|...| .+++++..++..+..+.
T Consensus 63 ~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~ 141 (272)
T PF02129_consen 63 QDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQP-WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRD 141 (272)
T ss_dssp EE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCT
T ss_pred ECCcccccCCCccccCChhHHHHHHHHHHHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccccc
Confidence 3889999999876552 33569999999999994 45679999999999999999999555 99999988764332110
Q ss_pred h-------------------------hcc---------------------------------------ccccchhhhcch
Q 035673 78 L-------------------------CHV---------------------------------------KFTFCCDIYKNI 93 (190)
Q Consensus 78 ~-------------------------~~~---------------------------------------~~~~~~~~~~~~ 93 (190)
. ... .....+......
T Consensus 142 ~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 221 (272)
T PF02129_consen 142 SIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPS 221 (272)
T ss_dssp SSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHH
T ss_pred chhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChH
Confidence 0 000 000000011112
Q ss_pred hhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCC---ceEEecCCCcC
Q 035673 94 NKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPY---EPLWIKGGGHC 141 (190)
Q Consensus 94 ~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~---~~~~~~~~~H~ 141 (190)
..+.++++|+|++.|-.|..+. ..+.+.++.+.... ...++-..+|.
T Consensus 222 ~~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 222 ERLDKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp HHHGG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred HHHhhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 3467899999999999996666 77888888887764 14445456774
No 102
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.24 E-value=1.9e-10 Score=77.84 Aligned_cols=122 Identities=21% Similarity=0.223 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh---------cCccceeeecCCcchhhhhhhccccccchhhhcc
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK---------LPRLRGVVLHSGILSGLRVLCHVKFTFCCDIYKN 92 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~---------~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (190)
+..+.+++.+.--. -.|+|+|.|+.++..++.. +|.++-+|++|++...- ..+..
T Consensus 92 l~yl~~~i~enGPF----DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~------------~~~~~ 155 (230)
T KOG2551|consen 92 LEYLEDYIKENGPF----DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS------------KKLDE 155 (230)
T ss_pred HHHHHHHHHHhCCC----ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc------------chhhh
Confidence 45555555554222 4799999999999998872 24678899999876421 11122
Q ss_pred hhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHHHhhc
Q 035673 93 INKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQEMEN 162 (190)
Q Consensus 93 ~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~~~ 162 (190)
....+.+++|.|.+.|+.|.+++...++.+++.+... .++...+||...... .+.+.+.+||.....
T Consensus 156 ~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a--~vl~HpggH~VP~~~-~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 156 SAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA--TVLEHPGGHIVPNKA-KYKEKIADFIQSFLQ 222 (230)
T ss_pred hhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC--eEEecCCCccCCCch-HHHHHHHHHHHHHHH
Confidence 2344578999999999999999999999999999876 444456799765544 677888888877653
No 103
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.15 E-value=9.1e-11 Score=81.46 Aligned_cols=114 Identities=20% Similarity=0.184 Sum_probs=63.1
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc---------CccceeeecCCcchhhhhhhccccccchhh
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL---------PRLRGVVLHSGILSGLRVLCHVKFTFCCDI 89 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~---------~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 89 (190)
+.++.+.++++.+.+.-...-..|+|+|.||.+|..++... +.++.+|++|++....... ...
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~--------~~~ 154 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY--------QEL 154 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G--------TTT
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh--------hhh
Confidence 44556666666665431112368999999999999888642 2578899999876522110 001
Q ss_pred hcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCC
Q 035673 90 YKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLEL 145 (190)
Q Consensus 90 ~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 145 (190)
+ ....+++|+|.++|++|.+++++.++.+.+.+... ..++..++||.....
T Consensus 155 ~----~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h~gGH~vP~~ 205 (212)
T PF03959_consen 155 Y----DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIEHDGGHHVPRK 205 (212)
T ss_dssp T------TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEEESSSSS----
T ss_pred h----ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEEECCCCcCcCC
Confidence 1 23467999999999999999999999998887764 334444568865543
No 104
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=99.15 E-value=6e-10 Score=82.32 Aligned_cols=134 Identities=19% Similarity=0.263 Sum_probs=101.1
Q ss_pred HHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecC-Ccchhh-------hhhh-------------------
Q 035673 27 QCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHS-GILSGL-------RVLC------------------- 79 (190)
Q Consensus 27 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~-~~~~~~-------~~~~------------------- 79 (190)
+++.+..+++.++++|.|.|-=|..++..|+..+||++++.+. ++.+.. +.++
T Consensus 161 ~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l 240 (367)
T PF10142_consen 161 EFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQL 240 (367)
T ss_pred HHHHhhcCCCccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhc
Confidence 3344445667799999999999999999999888999888543 222211 1111
Q ss_pred -ccccccchhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHH
Q 035673 80 -HVKFTFCCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQ 158 (190)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~ 158 (190)
...+....+..++..+..++++|.+++.|.+|+++.++.+..+++.+++.+.+.++|+++|.... .++.+.+..|+.
T Consensus 241 ~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~~ 318 (367)
T PF10142_consen 241 DTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFYN 318 (367)
T ss_pred CCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHHH
Confidence 01112233445666777888999999999999999999999999999999888999999997655 678888999998
Q ss_pred Hhhc
Q 035673 159 EMEN 162 (190)
Q Consensus 159 ~~~~ 162 (190)
....
T Consensus 319 ~~~~ 322 (367)
T PF10142_consen 319 RIQN 322 (367)
T ss_pred HHHc
Confidence 7653
No 105
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.14 E-value=9e-10 Score=74.02 Aligned_cols=112 Identities=24% Similarity=0.285 Sum_probs=81.5
Q ss_pred hCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccccccchhhhcchhhhhcCCCceEEEEcCCC
Q 035673 33 YGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKVKCPVLVIHGTED 111 (190)
Q Consensus 33 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 111 (190)
.+++..+|.+-|.||||.+++..+..++ .+.+++..+++........... .. .. + .+|++..||+.|
T Consensus 88 ~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~--------~~--~~-~-~~~i~~~Hg~~d 155 (206)
T KOG2112|consen 88 NGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGW--------LP--GV-N-YTPILLCHGTAD 155 (206)
T ss_pred cCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCC--------cc--cc-C-cchhheecccCC
Confidence 3667789999999999999999999988 7888887777665222111000 00 00 1 789999999999
Q ss_pred ceeechhHHHHHHHhC---CCCceEEecCCCcCCCCChhHHHHHHHHHHHH
Q 035673 112 DVVNWLHGNKLWKMAR---DPYEPLWIKGGGHCNLELYPDYIRHLCRFIQE 159 (190)
Q Consensus 112 ~~v~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~ 159 (190)
++||....+...+.+. ..+++..|++.+| ...++-.+.+..|+.+
T Consensus 156 ~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h---~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 156 PLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGH---STSPQELDDLKSWIKT 203 (206)
T ss_pred ceeehHHHHHHHHHHHHcCCceeeeecCCccc---cccHHHHHHHHHHHHH
Confidence 9999876655544333 2357777899999 5666778888999876
No 106
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.11 E-value=1.9e-10 Score=82.64 Aligned_cols=117 Identities=30% Similarity=0.404 Sum_probs=90.0
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhc
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCH 80 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~ 80 (190)
+++||++.|.+.|...+...-+..++++..+.++...+.|++.|+|.||..++++|..+|+|+++|+-+.|-+.......
T Consensus 274 wNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~ 353 (517)
T KOG1553|consen 274 WNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALF 353 (517)
T ss_pred cCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhh
Confidence 57899999999888777777788899999999999999999999999999999999999999999999987664332211
Q ss_pred cc---ccc-----ch--hhhcchhhhhcCCCceEEEEcCCCceeech
Q 035673 81 VK---FTF-----CC--DIYKNINKIKKVKCPVLVIHGTEDDVVNWL 117 (190)
Q Consensus 81 ~~---~~~-----~~--~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~ 117 (190)
.- +.. .. -..+..+.+.+.+-|+.+|.-.+|+++...
T Consensus 354 rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 354 RMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred hchHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 00 000 00 011233556678899999999999887654
No 107
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.10 E-value=1.1e-09 Score=75.78 Aligned_cols=109 Identities=22% Similarity=0.211 Sum_probs=74.1
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh-----hhh--hcccccc-chhh
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL-----RVL--CHVKFTF-CCDI 89 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~-----~~~--~~~~~~~-~~~~ 89 (190)
...+..+++++..++.+|+++|++.|+|.||.++..++..+| .|.++..+++..-.. ... +...... ....
T Consensus 78 ~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~ 157 (220)
T PF10503_consen 78 VAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAAA 157 (220)
T ss_pred hhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChHHH
Confidence 345778899999999999999999999999999999999999 888888777643211 000 0000000 0000
Q ss_pred hcchhhh-hcCCCceEEEEcCCCceeechhHHHHHHHhC
Q 035673 90 YKNINKI-KKVKCPVLVIHGTEDDVVNWLHGNKLWKMAR 127 (190)
Q Consensus 90 ~~~~~~~-~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~ 127 (190)
....... .....|++++||+.|..|.+....++.+++.
T Consensus 158 ~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 158 WGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred HHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 0000011 1123699999999999999998888877664
No 108
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.10 E-value=9.2e-10 Score=80.00 Aligned_cols=135 Identities=19% Similarity=0.202 Sum_probs=86.7
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcc------hh-------hhhhhcc---
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGIL------SG-------LRVLCHV--- 81 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~------~~-------~~~~~~~--- 81 (190)
+.+...+++|++++ |. .++.+.|.||||.+|...+...| .+..+-++++-. .+ +..+...
T Consensus 159 i~E~~~Ll~Wl~~~-G~--~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~ 235 (348)
T PF09752_consen 159 ILESRALLHWLERE-GY--GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFED 235 (348)
T ss_pred HHHHHHHHHHHHhc-CC--CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcc
Confidence 45677788888888 55 69999999999999999999998 444444555421 11 0111000
Q ss_pred c------------------------------cccchhhhcchhhhhcCC-----CceEEEEcCCCceeechhHHHHHHHh
Q 035673 82 K------------------------------FTFCCDIYKNINKIKKVK-----CPVLVIHGTEDDVVNWLHGNKLWKMA 126 (190)
Q Consensus 82 ~------------------------------~~~~~~~~~~~~~~~~~~-----~P~l~i~g~~D~~v~~~~~~~~~~~~ 126 (190)
. ..+....++....+.+.. -.++++.+++|.+||......+.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W 315 (348)
T PF09752_consen 236 TVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW 315 (348)
T ss_pred cchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhC
Confidence 0 000000011112233333 34789999999999999999898888
Q ss_pred CCCCceEEecCCCcC--CCCChhHHHHHHHHHHH
Q 035673 127 RDPYEPLWIKGGGHC--NLELYPDYIRHLCRFIQ 158 (190)
Q Consensus 127 ~~~~~~~~~~~~~H~--~~~~~~~~~~~i~~~l~ 158 (190)
++. ++.++++ ||. ++.....+.+.|.+-++
T Consensus 316 PGs-EvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 316 PGS-EVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CCC-eEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 876 8888876 997 34444556677776553
No 109
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.07 E-value=4.3e-10 Score=78.03 Aligned_cols=125 Identities=22% Similarity=0.352 Sum_probs=83.4
Q ss_pred CchhhhHHHHHHHHHHH---hCCCCCcEEEEEEccChHHHHHHHhhcC-----ccceeeecCCcchh--h--hhh-----
Q 035673 16 SNTYADIEAVYQCLQTE---YGVSQEDLILYGQSVGSGPTLHLASKLP-----RLRGVVLHSGILSG--L--RVL----- 78 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~v~~~v~~~~~~~~--~--~~~----- 78 (190)
....+|+.++++++.++ ++++.++++|+|+|.||.+++.++.... .++++++++|..+. . ...
T Consensus 46 p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~ 125 (211)
T PF07859_consen 46 PAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNE 125 (211)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHH
T ss_pred cccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccc
Confidence 56788999999999998 5668899999999999999999987532 58999999997643 1 000
Q ss_pred hcc-cc------ccchhhhc--------chhhhh--cC--CCceEEEEcCCCceeechhHHHHHHHhCCC---CceEEec
Q 035673 79 CHV-KF------TFCCDIYK--------NINKIK--KV--KCPVLVIHGTEDDVVNWLHGNKLWKMARDP---YEPLWIK 136 (190)
Q Consensus 79 ~~~-~~------~~~~~~~~--------~~~~~~--~~--~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~---~~~~~~~ 136 (190)
... .. ......+. ....+. .. -.|+++++|+.|.+++ ++..+.+++++. +++++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~~--~~~~~~~~L~~~gv~v~~~~~~ 203 (211)
T PF07859_consen 126 NKDDPFLPAPKIDWFWKLYLPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLVD--DSLRFAEKLKKAGVDVELHVYP 203 (211)
T ss_dssp HSTTSSSBHHHHHHHHHHHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTHH--HHHHHHHHHHHTT-EEEEEEET
T ss_pred ccccccccccccccccccccccccccccccccccccccccCCCeeeeccccccchH--HHHHHHHHHHHCCCCEEEEEEC
Confidence 000 00 00000000 000111 12 3599999999998764 556677666533 5777899
Q ss_pred CCCcCC
Q 035673 137 GGGHCN 142 (190)
Q Consensus 137 ~~~H~~ 142 (190)
+..|.+
T Consensus 204 g~~H~f 209 (211)
T PF07859_consen 204 GMPHGF 209 (211)
T ss_dssp TEETTG
T ss_pred CCeEEe
Confidence 999964
No 110
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.04 E-value=6.2e-10 Score=74.54 Aligned_cols=126 Identities=13% Similarity=0.132 Sum_probs=90.0
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc--CccceeeecCCcchhhhhhhcc---ccccchh---
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL--PRLRGVVLHSGILSGLRVLCHV---KFTFCCD--- 88 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--~~v~~~v~~~~~~~~~~~~~~~---~~~~~~~--- 88 (190)
....++..-++++.+.+. ..+.+.+.|||.|+.+++.+..+. |+|.++++.|+....-...... .+.+..+
T Consensus 116 qt~~~~~~gv~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae 194 (270)
T KOG4627|consen 116 QTMTQFTHGVNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAE 194 (270)
T ss_pred HHHHHHHHHHHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhh
Confidence 445677778888888875 456799999999999999988664 5999999999987633222111 1111111
Q ss_pred -hhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCC
Q 035673 89 -IYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLE 144 (190)
Q Consensus 89 -~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 144 (190)
..........++.|++++.++.|.---.++.+.+..++.+. .+..+++.+|+...
T Consensus 195 ~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a-~~~~f~n~~hy~I~ 250 (270)
T KOG4627|consen 195 SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA-SFTLFKNYDHYDII 250 (270)
T ss_pred hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc-ceeecCCcchhhHH
Confidence 11123455678899999999999866667888888888775 88999999997543
No 111
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.99 E-value=1.2e-09 Score=82.78 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=57.5
Q ss_pred CCCCCCCCCCCCCCCC---chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch
Q 035673 1 YDYSGYGASTGKPSES---NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~ 73 (190)
+|++|+|.+....... ...+++.+.++++.+.++++.++++++||||||.+|..++...+ +|.++++++|...
T Consensus 79 VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 79 VDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred EECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 5999999876432211 12346788888887777767789999999999999999999888 8999999998543
No 112
>PRK04940 hypothetical protein; Provisional
Probab=98.97 E-value=2.9e-08 Score=66.10 Aligned_cols=114 Identities=14% Similarity=0.086 Sum_probs=75.6
Q ss_pred CcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhcccc-ccchhhhcc--hhhhhcCC--CceEEEEcCCCc
Q 035673 38 EDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKF-TFCCDIYKN--INKIKKVK--CPVLVIHGTEDD 112 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~--~P~l~i~g~~D~ 112 (190)
+++.++|.|+||+.|..++.++. + ..|+++|...+...+...-. ...+..+.. ...++ ++ -..+++..+.|+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~-~~~p~r~~vllq~gDE 136 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFR-EKNRDRCLVILSRNDE 136 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhh-hcCcccEEEEEeCCCc
Confidence 57999999999999999999987 4 66788887766543221110 000111111 11222 23 345999999999
Q ss_pred eeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHH
Q 035673 113 VVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQ 158 (190)
Q Consensus 113 ~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~ 158 (190)
+.++..+...+... .+.++.+|+.|. +..-+++...|.+|+.
T Consensus 137 vLDyr~a~~~y~~~---y~~~v~~GGdH~-f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 137 VLDSQRTAEELHPY---YEIVWDEEQTHK-FKNISPHLQRIKAFKT 178 (180)
T ss_pred ccCHHHHHHHhccC---ceEEEECCCCCC-CCCHHHHHHHHHHHHh
Confidence 99998887766432 256777777774 4455678899999984
No 113
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.96 E-value=5.2e-09 Score=74.00 Aligned_cols=86 Identities=22% Similarity=0.373 Sum_probs=68.8
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccccccchhhhcchhhhhc-CCCc
Q 035673 25 VYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKK-VKCP 102 (190)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P 102 (190)
+.+-+.+++++|..+|.++|.|+||+.++.++.++| .+.+.+++|+--+. ...++. -+.|
T Consensus 256 i~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------------------v~lv~~lk~~p 317 (387)
T COG4099 256 ILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------------------VYLVRTLKKAP 317 (387)
T ss_pred HHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch------------------hhhhhhhccCc
Confidence 334677788999999999999999999999999999 88999998875431 112223 3589
Q ss_pred eEEEEcCCCceeechhHHHHHHHhCC
Q 035673 103 VLVIHGTEDDVVNWLHGNKLWKMARD 128 (190)
Q Consensus 103 ~l~i~g~~D~~v~~~~~~~~~~~~~~ 128 (190)
+.++|+.+|+++|.+.+.-.++.++.
T Consensus 318 iWvfhs~dDkv~Pv~nSrv~y~~lk~ 343 (387)
T COG4099 318 IWVFHSSDDKVIPVSNSRVLYERLKA 343 (387)
T ss_pred eEEEEecCCCccccCcceeehHHHHh
Confidence 99999999999999988877766553
No 114
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.95 E-value=2.5e-08 Score=73.43 Aligned_cols=124 Identities=20% Similarity=0.176 Sum_probs=82.9
Q ss_pred CchhhhHHHHHHHHHHH---hCCCCCcEEEEEEccChHHHHHHHhhcC-----ccceeeecCCcchhhh-hhh----cc-
Q 035673 16 SNTYADIEAVYQCLQTE---YGVSQEDLILYGQSVGSGPTLHLASKLP-----RLRGVVLHSGILSGLR-VLC----HV- 81 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~v~~~v~~~~~~~~~~-~~~----~~- 81 (190)
....+|+.+++.++.++ +++++++|+|+|+|.||.+++.++..-. ...+.++++|..+... ... ..
T Consensus 127 p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~ 206 (312)
T COG0657 127 PAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEA 206 (312)
T ss_pred CchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCc
Confidence 45578899999999976 5788999999999999999999886542 5788899999765442 000 00
Q ss_pred --------------c-cccchhh----hcch--hhhhcCCCceEEEEcCCCceeechhHHHHHHHhCC---CCceEEecC
Q 035673 82 --------------K-FTFCCDI----YKNI--NKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWIKG 137 (190)
Q Consensus 82 --------------~-~~~~~~~----~~~~--~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~ 137 (190)
. .....+. ..+. ..+.. -.|+++++|+.|.+.+ +...+.+.+.. .+++..+++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g 283 (312)
T COG0657 207 DLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPG 283 (312)
T ss_pred cccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCC
Confidence 0 0000000 0000 11233 4789999999999887 55556555543 357788999
Q ss_pred CCcCC
Q 035673 138 GGHCN 142 (190)
Q Consensus 138 ~~H~~ 142 (190)
..|.+
T Consensus 284 ~~H~f 288 (312)
T COG0657 284 MIHGF 288 (312)
T ss_pred cceec
Confidence 99965
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.95 E-value=1.2e-08 Score=65.78 Aligned_cols=105 Identities=20% Similarity=0.301 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecC-CcchhhhhhhccccccchhhhcchhhhhcC
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHS-GILSGLRVLCHVKFTFCCDIYKNINKIKKV 99 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (190)
....+..+++.+ ...++++-|+||||-++..++..-. .|+++++++ ||... ... +.. -.+.+..+
T Consensus 75 ~~~~~aql~~~l--~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp-GKP---------e~~-Rt~HL~gl 141 (213)
T COG3571 75 YIVAIAQLRAGL--AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP-GKP---------EQL-RTEHLTGL 141 (213)
T ss_pred HHHHHHHHHhcc--cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCC-CCc---------ccc-hhhhccCC
Confidence 344444555554 5568999999999999998887665 788988776 33221 000 000 12456778
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcC
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHC 141 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~ 141 (190)
++|++|.+|+.|++-..++...+ .+....+++++.++.|.
T Consensus 142 ~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~adHD 181 (213)
T COG3571 142 KTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLEDADHD 181 (213)
T ss_pred CCCeEEeecccccccCHHHHHhh--hcCCceEEEEeccCccc
Confidence 99999999999998776655322 34455689999999996
No 116
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.94 E-value=2.5e-08 Score=72.15 Aligned_cols=117 Identities=26% Similarity=0.404 Sum_probs=77.4
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHh-CCCCCcEEEEEEccChHHHHHHHhhcC-----ccceeeec-CCcch
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEY-GVSQEDLILYGQSVGSGPTLHLASKLP-----RLRGVVLH-SGILS 73 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~v~~~v~~-~~~~~ 73 (190)
|+|||.|.|.+.+...+...|..+.+++++++. |+.++.|++.|||+||.++..++..+. .++-+++- -++.+
T Consensus 177 fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfss 256 (365)
T PF05677_consen 177 FNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSS 256 (365)
T ss_pred ECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcch
Confidence 589999999998887888899999999998854 567799999999999999998776653 23333332 23332
Q ss_pred hhhhh---hcc----ccccchhhhcchhhhhcCCCceEEEEcCC-------Cceeech
Q 035673 74 GLRVL---CHV----KFTFCCDIYKNINKIKKVKCPVLVIHGTE-------DDVVNWL 117 (190)
Q Consensus 74 ~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~P~l~i~g~~-------D~~v~~~ 117 (190)
..... ... -.....=.++....-.++.||=+++++.+ |.+++++
T Consensus 257 l~~vas~~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~ 314 (365)
T PF05677_consen 257 LAAVASQFFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPE 314 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccccchhhcccccCCcc
Confidence 11111 000 00000111234455667889999999875 5555554
No 117
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.92 E-value=2.3e-08 Score=66.85 Aligned_cols=134 Identities=22% Similarity=0.291 Sum_probs=84.6
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-----ccceeeecCCcchhhhhhhccc-cccch--
Q 035673 16 SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-----RLRGVVLHSGILSGLRVLCHVK-FTFCC-- 87 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~v~~~v~~~~~~~~~~~~~~~~-~~~~~-- 87 (190)
.....|+.++++...++++. ++++++|.|+|+-+.-....+.| +|+.+++++|-....-...-.. +....
T Consensus 48 ~~~a~Dl~~~i~~y~~~w~~--~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~ 125 (192)
T PF06057_consen 48 EQTAADLARIIRHYRARWGR--KRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDD 125 (192)
T ss_pred HHHHHHHHHHHHHHHHHhCC--ceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCc
Confidence 34567999999999999854 89999999999988887777766 6999999998543211110000 00001
Q ss_pred hhhcchhhhhcCC-CceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHH
Q 035673 88 DIYKNINKIKKVK-CPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQ 158 (190)
Q Consensus 88 ~~~~~~~~~~~~~-~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~ 158 (190)
..++....+.++. .|+++|+|+++.-..-. .+ -....+.+.+|| ||.+-.+.+.+.+.|.+-++
T Consensus 126 ~~~~~~pei~~l~~~~v~CiyG~~E~d~~cp---~l---~~~~~~~i~lpG-gHHfd~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 126 AAYPVIPEIAKLPPAPVQCIYGEDEDDSLCP---SL---RQPGVEVIALPG-GHHFDGDYDALAKRILDALK 190 (192)
T ss_pred ccCCchHHHHhCCCCeEEEEEcCCCCCCcCc---cc---cCCCcEEEEcCC-CcCCCCCHHHHHHHHHHHHh
Confidence 1123445566665 59999999987642111 11 112346677887 55444555667777766654
No 118
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.91 E-value=7.8e-09 Score=73.44 Aligned_cols=155 Identities=18% Similarity=0.256 Sum_probs=92.6
Q ss_pred CCCCCCCCCCCCCC---CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhh
Q 035673 2 DYSGYGASTGKPSE---SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRV 77 (190)
Q Consensus 2 D~~G~G~s~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~ 77 (190)
|.||+..-...... .-..+++.+.+..+.+++++ +.++-+|-..||++..++|..+| +|.++|+++|......+
T Consensus 62 ~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw 139 (283)
T PF03096_consen 62 DAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW 139 (283)
T ss_dssp E-TTTSTT-----TT-----HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H
T ss_pred eCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH
Confidence 67888654332222 33456788888888888877 78999999999999999999999 99999999984332111
Q ss_pred h--hcc---------------------------------------------------ccccchhhhcch----hhhhcCC
Q 035673 78 L--CHV---------------------------------------------------KFTFCCDIYKNI----NKIKKVK 100 (190)
Q Consensus 78 ~--~~~---------------------------------------------------~~~~~~~~~~~~----~~~~~~~ 100 (190)
. ... +.....+.+... .......
T Consensus 140 ~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~ 219 (283)
T PF03096_consen 140 MEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLG 219 (283)
T ss_dssp HHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCC
T ss_pred HHHHHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCC
Confidence 0 000 000011111111 1233456
Q ss_pred CceEEEEcCCCceeechhHHHHHHHhCCC-CceEEecCCCcCCCCChh-HHHHHHHHHHHHh
Q 035673 101 CPVLVIHGTEDDVVNWLHGNKLWKMARDP-YEPLWIKGGGHCNLELYP-DYIRHLCRFIQEM 160 (190)
Q Consensus 101 ~P~l~i~g~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~~ 160 (190)
||+|++.|+..+.+ +.+.++..++.+. .+++.++++|=...++.| ...+.+.-|++..
T Consensus 220 c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 220 CPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp S-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred CCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 99999999999865 4557888888765 467778898776666655 4778888888753
No 119
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=2.3e-08 Score=77.44 Aligned_cols=141 Identities=20% Similarity=0.201 Sum_probs=96.7
Q ss_pred hhhHHHHHHHHHHHhC-CCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh--hhhhccccccchhh-----
Q 035673 19 YADIEAVYQCLQTEYG-VSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL--RVLCHVKFTFCCDI----- 89 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~--~~~~~~~~~~~~~~----- 89 (190)
.+|..+.++++.+++| +|.++++|-|+|.||++++..+.++| -++.+|.-+|..+.. ......++.-..+.
T Consensus 707 ~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~~nE~gY 786 (867)
T KOG2281|consen 707 VEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYPDNNEHGY 786 (867)
T ss_pred ehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcCCCccchhcc
Confidence 5688889999999986 57899999999999999999999999 566666666654411 11111111111100
Q ss_pred -----hcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhC---CCCceEEecCCCcCCCC-ChhH-HHHHHHHHHHH
Q 035673 90 -----YKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMAR---DPYEPLWIKGGGHCNLE-LYPD-YIRHLCRFIQE 159 (190)
Q Consensus 90 -----~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~-~~~~-~~~~i~~~l~~ 159 (190)
....+.+..-...+|++||--|..|...++.++...+. ++.++.+||+..|..-. +..+ +-..+..|+++
T Consensus 787 ~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 787 GAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred cchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 01112333334569999999999999999998887554 44688999999997422 2223 44788888865
No 120
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.88 E-value=2e-09 Score=79.12 Aligned_cols=110 Identities=14% Similarity=0.125 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhh---hhh---cc-----c------c
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLR---VLC---HV-----K------F 83 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~---~~~---~~-----~------~ 83 (190)
|...++||+.....+++++|+++|+||||..++.+++..++|++.|..+-+..... .+. .. . .
T Consensus 209 ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~i 288 (390)
T PF12715_consen 209 DDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYI 288 (390)
T ss_dssp HHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--
T ss_pred HHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhC
Confidence 45568899999999999999999999999999999999999988876554322111 110 00 0 1
Q ss_pred ccchhhhcchhhhhcC-CCceEEEEcCCCceeechhHHHHHHHhCCCCce
Q 035673 84 TFCCDIYKNINKIKKV-KCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEP 132 (190)
Q Consensus 84 ~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~ 132 (190)
......++..+-++-+ ..|++++.|..|..++. .+..++....+..+
T Consensus 289 Pgl~r~~D~PdIasliAPRPll~~nG~~Dklf~i--V~~AY~~~~~p~n~ 336 (390)
T PF12715_consen 289 PGLWRYFDFPDIASLIAPRPLLFENGGKDKLFPI--VRRAYAIMGAPDNF 336 (390)
T ss_dssp TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHHH--HHHHHHHTT-GGGE
T ss_pred ccHHhhCccHHHHHHhCCCcchhhcCCcccccHH--HHHHHHhcCCCcce
Confidence 1111222222222222 57999999999999866 67777776655333
No 121
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.88 E-value=1.2e-08 Score=76.58 Aligned_cols=65 Identities=14% Similarity=0.238 Sum_probs=51.0
Q ss_pred hhhcCC-CceEEEEcCCCceeechhHHHHHHHh---CCC-CceEEecCCCcCCCC----ChhHHHHHHHHHHHH
Q 035673 95 KIKKVK-CPVLVIHGTEDDVVNWLHGNKLWKMA---RDP-YEPLWIKGGGHCNLE----LYPDYIRHLCRFIQE 159 (190)
Q Consensus 95 ~~~~~~-~P~l~i~g~~D~~v~~~~~~~~~~~~---~~~-~~~~~~~~~~H~~~~----~~~~~~~~i~~~l~~ 159 (190)
.+++|+ +|++.+.|++|.++++.++..+.+.+ +.. +..+..+++||..+. ...+++..|.+||.+
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 566788 99999999999999999999999875 433 346667789997432 234688999999875
No 122
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.85 E-value=2.1e-08 Score=74.25 Aligned_cols=120 Identities=14% Similarity=0.225 Sum_probs=83.2
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-c-cceeeecCCcchhhh--------------------
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-R-LRGVVLHSGILSGLR-------------------- 76 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~-v~~~v~~~~~~~~~~-------------------- 76 (190)
.+.+..+++.+++..+. ++|.++|+|.||+++..+++.++ + |+++.++....+...
T Consensus 164 ~e~l~~aid~v~~itg~--~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i 241 (445)
T COG3243 164 LEGLSEAIDTVKDITGQ--KDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADI 241 (445)
T ss_pred HHHHHHHHHHHHHHhCc--cccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhh
Confidence 36788899999998865 78999999999999999999888 4 888886664322000
Q ss_pred ----------------hhhc----------------cccccchhhh---------------------------------c
Q 035673 77 ----------------VLCH----------------VKFTFCCDIY---------------------------------K 91 (190)
Q Consensus 77 ----------------~~~~----------------~~~~~~~~~~---------------------------------~ 91 (190)
.+.. ....+....+ .
T Consensus 242 ~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G 321 (445)
T COG3243 242 VQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSG 321 (445)
T ss_pred hhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECC
Confidence 0000 0000000000 0
Q ss_pred chhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcC
Q 035673 92 NINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHC 141 (190)
Q Consensus 92 ~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~ 141 (190)
..-.+.+++||++++.+++|.++|++......+.+++.++++.. +.||.
T Consensus 322 ~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~-~sGHI 370 (445)
T COG3243 322 TMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLS-RSGHI 370 (445)
T ss_pred EEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEe-cCceE
Confidence 01256679999999999999999999998888888886454444 67996
No 123
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.83 E-value=2.3e-08 Score=70.25 Aligned_cols=137 Identities=12% Similarity=0.204 Sum_probs=77.6
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC----ccceeeecCCcchhhh---hhhcccc-------
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP----RLRGVVLHSGILSGLR---VLCHVKF------- 83 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~----~v~~~v~~~~~~~~~~---~~~~~~~------- 83 (190)
..+-+...++.+.+.. +..++.++|||+||.+|+.+|.+-. .+..++++++...... .......
T Consensus 48 i~~la~~y~~~I~~~~--~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~ 125 (229)
T PF00975_consen 48 IEELASRYAEAIRARQ--PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEEL 125 (229)
T ss_dssp HHHHHHHHHHHHHHHT--SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhC--CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHH
Confidence 3334555666666654 3349999999999999999997642 5888998884322110 0000000
Q ss_pred -----------------ccchhhh----cchhh--hhcC---CCceEEEEcCCCceeech---hHHHHHHHhCCCCceEE
Q 035673 84 -----------------TFCCDIY----KNINK--IKKV---KCPVLVIHGTEDDVVNWL---HGNKLWKMARDPYEPLW 134 (190)
Q Consensus 84 -----------------~~~~~~~----~~~~~--~~~~---~~P~l~i~g~~D~~v~~~---~~~~~~~~~~~~~~~~~ 134 (190)
......+ ..... .... .+|..+.....|+..... ....+.+...+...++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 205 (229)
T PF00975_consen 126 RRIGGTPDASLEDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHD 205 (229)
T ss_dssp HHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEE
T ss_pred HHhcCCchhhhcCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEE
Confidence 0000000 00001 1112 356888889999887655 23336666666556666
Q ss_pred ecCCCcCCCCC--hhHHHHHHHHHH
Q 035673 135 IKGGGHCNLEL--YPDYIRHLCRFI 157 (190)
Q Consensus 135 ~~~~~H~~~~~--~~~~~~~i~~~l 157 (190)
++ ++|+.+.. .+++.+.|.++|
T Consensus 206 v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 206 VP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp ES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred Ec-CCCcEecchHHHHHHHHHhccC
Confidence 66 48986555 345666666654
No 124
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.82 E-value=2.1e-09 Score=78.00 Aligned_cols=159 Identities=21% Similarity=0.310 Sum_probs=92.2
Q ss_pred CCCCCCCCCCCCCCchhhhHHHHHHHHHHHh-CCCCCcEEEEEEccChHHHHHHHhhc----C-ccceeeecCCcchh-h
Q 035673 3 YSGYGASTGKPSESNTYADIEAVYQCLQTEY-GVSQEDLILYGQSVGSGPTLHLASKL----P-RLRGVVLHSGILSG-L 75 (190)
Q Consensus 3 ~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~----~-~v~~~v~~~~~~~~-~ 75 (190)
+++++.+.+.........+...+..++.... ..+..++.++|.|+||..++...... + .+..++.-+++... .
T Consensus 124 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (299)
T COG1073 124 YRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELIDYLITPGGFAPLPA 203 (299)
T ss_pred HHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhhhhccCCCCCCCCc
Confidence 4455555433333333333333333333221 01235778888888887777755431 1 34444444444332 1
Q ss_pred hhhhcccc---ccchhhhcchhhhhcCC-CceEEEEcCCCceeechhHHHHHHHhCC-CCceEEecCCCcCCCC-Chh--
Q 035673 76 RVLCHVKF---TFCCDIYKNINKIKKVK-CPVLVIHGTEDDVVNWLHGNKLWKMARD-PYEPLWIKGGGHCNLE-LYP-- 147 (190)
Q Consensus 76 ~~~~~~~~---~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~v~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~-~~~-- 147 (190)
........ .......+....+..+. +|+++++|.+|..||...+..+++.... +....++++++|.... ..+
T Consensus 204 ~~~~~~~~~~~~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~ 283 (299)
T COG1073 204 PEAPLDTLPLRAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAV 283 (299)
T ss_pred ccccccccccchhhhccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHH
Confidence 11100000 11122233344555566 7999999999999999999999998887 6677888999998653 223
Q ss_pred -HHHHHHHHHHHHhh
Q 035673 148 -DYIRHLCRFIQEME 161 (190)
Q Consensus 148 -~~~~~i~~~l~~~~ 161 (190)
+.++.+.+|+.+..
T Consensus 284 ~~~~~~~~~f~~~~l 298 (299)
T COG1073 284 EQALDKLAEFLERHL 298 (299)
T ss_pred HHHHHHHHHHHHHhc
Confidence 57788999987753
No 125
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.81 E-value=7.8e-08 Score=67.78 Aligned_cols=125 Identities=15% Similarity=0.102 Sum_probs=82.4
Q ss_pred chhhhHHHHHHHHHHHh--------CCCCCcEEEEEEccChHHHHHHHhhc-----C-ccceeeecCCcchhhhhhhccc
Q 035673 17 NTYADIEAVYQCLQTEY--------GVSQEDLILYGQSVGSGPTLHLASKL-----P-RLRGVVLHSGILSGLRVLCHVK 82 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~--------~~~~~~~~l~G~S~Gg~~a~~~a~~~-----~-~v~~~v~~~~~~~~~~~~~~~~ 82 (190)
...+++.++++|+.+.+ ..|..++.|+|||.||-+|..++..+ + ++++++++.|+...-.. ....
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~-~~~~ 140 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKG-SQTE 140 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccc-cCCC
Confidence 34567888888877742 13567999999999999999999887 3 79999999998631111 0000
Q ss_pred cccchhhhcchhhhhcCCCceEEEEcCCCce--------eec--hhHHHHHHHhCCCCceEEecCCCcCCCCCh
Q 035673 83 FTFCCDIYKNINKIKKVKCPVLVIHGTEDDV--------VNW--LHGNKLWKMARDPYEPLWIKGGGHCNLELY 146 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~--------v~~--~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 146 (190)
... ......--+..+|++++...-+.. +-+ ..-+++++.+..+....+..+.||..+.+.
T Consensus 141 -P~v---~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd 210 (259)
T PF12740_consen 141 -PPV---LTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDD 210 (259)
T ss_pred -Ccc---ccCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcC
Confidence 000 111111223569999998776642 222 355678888888766777889999865443
No 126
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.80 E-value=1.4e-07 Score=67.75 Aligned_cols=56 Identities=25% Similarity=0.327 Sum_probs=43.8
Q ss_pred CchhhhHHHHHHHHHHHhCC---CCCcEEEEEEccChHHHHHHHhhcC----ccceeeecCCc
Q 035673 16 SNTYADIEAVYQCLQTEYGV---SQEDLILYGQSVGSGPTLHLASKLP----RLRGVVLHSGI 71 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~----~v~~~v~~~~~ 71 (190)
.+..+.+...++++.+...- ...+++++|||.|++++++++.+.+ +|.+++++-|.
T Consensus 59 ~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 59 FSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPT 121 (266)
T ss_pred cCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCc
Confidence 34445577777777776541 4578999999999999999999887 78899998884
No 127
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.77 E-value=2.5e-08 Score=76.00 Aligned_cols=72 Identities=11% Similarity=0.153 Sum_probs=55.9
Q ss_pred CCCCCCCCCCCCCCC-CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-----ccceeeecCCcchh
Q 035673 1 YDYSGYGASTGKPSE-SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-----RLRGVVLHSGILSG 74 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~v~~~v~~~~~~~~ 74 (190)
.|++|+|.+.+.... ....+++.+.++.+.+..+ .++++++||||||.++..++..+| .|+.+|++++...+
T Consensus 126 ~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 126 KTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred CCcccCCCCccccccHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 378999988765432 3456788888888887764 378999999999999999998877 37888888875443
No 128
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.77 E-value=2.2e-07 Score=68.37 Aligned_cols=142 Identities=16% Similarity=0.193 Sum_probs=89.9
Q ss_pred CchhhhHHHHHHHHHHH----hCCCCCcEEEEEEccChHHHHHHHhhc-------CccceeeecCCcchhhhhhhcc---
Q 035673 16 SNTYADIEAVYQCLQTE----YGVSQEDLILYGQSVGSGPTLHLASKL-------PRLRGVVLHSGILSGLRVLCHV--- 81 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~~-------~~v~~~v~~~~~~~~~~~~~~~--- 81 (190)
...++|...++.|+.++ ++.|.++++|+|-|.||.+|..++.+. +++++.|++.|+..+.......
T Consensus 140 Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~ 219 (336)
T KOG1515|consen 140 PAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQ 219 (336)
T ss_pred CccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHH
Confidence 35678999999999885 567889999999999999998887542 3799999999987543221100
Q ss_pred -----------ccccchh-------------hhcchh-----hhhcCC-CceEEEEcCCCceeechhHHHHHHHhCCC--
Q 035673 82 -----------KFTFCCD-------------IYKNIN-----KIKKVK-CPVLVIHGTEDDVVNWLHGNKLWKMARDP-- 129 (190)
Q Consensus 82 -----------~~~~~~~-------------~~~~~~-----~~~~~~-~P~l~i~g~~D~~v~~~~~~~~~~~~~~~-- 129 (190)
....++. ...+.. ...... .|++++.++.|.+. +....+.+.+++.
T Consensus 220 ~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv 297 (336)
T KOG1515|consen 220 NLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGV 297 (336)
T ss_pred hhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCC
Confidence 0000000 000111 112233 45999999999876 4445555555432
Q ss_pred -CceEEecCCCcCCCC------ChhHHHHHHHHHHHH
Q 035673 130 -YEPLWIKGGGHCNLE------LYPDYIRHLCRFIQE 159 (190)
Q Consensus 130 -~~~~~~~~~~H~~~~------~~~~~~~~i~~~l~~ 159 (190)
.++..++++.|.++. ...+..+.+.+|+..
T Consensus 298 ~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 298 EVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred eEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 355568899996321 112456777778765
No 129
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.76 E-value=2.2e-07 Score=64.23 Aligned_cols=134 Identities=20% Similarity=0.247 Sum_probs=73.9
Q ss_pred CCCCCCCCCCch---hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhh---c
Q 035673 7 GASTGKPSESNT---YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLC---H 80 (190)
Q Consensus 7 G~s~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~---~ 80 (190)
|.|++......+ ..++..+++|+. ..| ..++.++.-|+.|-+|+..++.- .+.-+|+.-+..+....+. .
T Consensus 70 GlSsG~I~eftms~g~~sL~~V~dwl~-~~g--~~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~ 145 (294)
T PF02273_consen 70 GLSSGDINEFTMSIGKASLLTVIDWLA-TRG--IRRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALG 145 (294)
T ss_dssp -----------HHHHHHHHHHHHHHHH-HTT-----EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHS
T ss_pred cCCCCChhhcchHHhHHHHHHHHHHHH-hcC--CCcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhc
Confidence 788877555433 468999999998 444 47899999999999999999954 5777777667654322110 0
Q ss_pred cccc----------------------c--------chhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCC-
Q 035673 81 VKFT----------------------F--------CCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDP- 129 (190)
Q Consensus 81 ~~~~----------------------~--------~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~- 129 (190)
..+. | +.+.-.....++.+.+|++.+++++|.+|.......+...+...
T Consensus 146 ~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~ 225 (294)
T PF02273_consen 146 YDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNK 225 (294)
T ss_dssp S-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--
T ss_pred cchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCc
Confidence 0000 0 00111123456778999999999999999999999998877765
Q ss_pred CceEEecCCCcCCCC
Q 035673 130 YEPLWIKGGGHCNLE 144 (190)
Q Consensus 130 ~~~~~~~~~~H~~~~ 144 (190)
++++.++|+.|..-+
T Consensus 226 ~klysl~Gs~HdL~e 240 (294)
T PF02273_consen 226 CKLYSLPGSSHDLGE 240 (294)
T ss_dssp EEEEEETT-SS-TTS
T ss_pred eeEEEecCccchhhh
Confidence 466678999995544
No 130
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.73 E-value=9.8e-09 Score=74.07 Aligned_cols=54 Identities=20% Similarity=0.249 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS 73 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~ 73 (190)
+++..+++++.+..+++.++++++||||||.+|..++...+ +++++++++|...
T Consensus 94 ~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 94 AELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 46778888888876666789999999999999999999988 8999999988654
No 131
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.73 E-value=4.4e-07 Score=64.31 Aligned_cols=156 Identities=18% Similarity=0.194 Sum_probs=102.3
Q ss_pred CCCCCCCCCCCCCC-C--CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhh
Q 035673 1 YDYSGYGASTGKPS-E--SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLR 76 (190)
Q Consensus 1 ~D~~G~G~s~~~~~-~--~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~ 76 (190)
.|-||+-....... . .-..+++.+.+-.+.+++++ +.++-+|-..|+++..++|..|| +|.++|++++-.....
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~l--k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g 161 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGL--KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG 161 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCc--ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch
Confidence 36788754332221 1 34567888888888888877 78999999999999999999999 9999999997432111
Q ss_pred h--hhcc---------------------------------------------------ccccchhhhcchhh--------
Q 035673 77 V--LCHV---------------------------------------------------KFTFCCDIYKNINK-------- 95 (190)
Q Consensus 77 ~--~~~~---------------------------------------------------~~~~~~~~~~~~~~-------- 95 (190)
+ +... ++....+.+.....
T Consensus 162 wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~ 241 (326)
T KOG2931|consen 162 WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKL 241 (326)
T ss_pred HHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCc
Confidence 1 0000 00111111111111
Q ss_pred hhcCCCceEEEEcCCCceeechhHHHHHHHhCCC-CceEEecCCCcCCCCChh-HHHHHHHHHHHHh
Q 035673 96 IKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDP-YEPLWIKGGGHCNLELYP-DYIRHLCRFIQEM 160 (190)
Q Consensus 96 ~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~-~~~~~i~~~l~~~ 160 (190)
...++||++++.|++.+.+. .+..+...+.+. ..++.+.++|-...++.| ...+.+.-|++..
T Consensus 242 ~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 242 GTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred CccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 11456999999999998654 445666666543 567778888887777555 4668888888654
No 132
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.72 E-value=3.5e-07 Score=63.49 Aligned_cols=141 Identities=20% Similarity=0.265 Sum_probs=93.0
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc------CccceeeecCCcch-h-hh------hhhccc
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL------PRLRGVVLHSGILS-G-LR------VLCHVK 82 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------~~v~~~v~~~~~~~-~-~~------~~~~~~ 82 (190)
.+...+..++.+|.+++++ .++-++||||||.-...++..+ |.+..+|.+++..+ + .. ......
T Consensus 117 ~~s~wlk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~ 194 (288)
T COG4814 117 DQSKWLKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDG 194 (288)
T ss_pred hHHHHHHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccC
Confidence 3455788899999999977 7899999999999988888765 56888888776554 1 10 000000
Q ss_pred cccchhhh-cch-hhhh--cCCCceEEEEcCC------CceeechhHHHHHHHhCCC-CceE--Ee--cCCCcCCCCChh
Q 035673 83 FTFCCDIY-KNI-NKIK--KVKCPVLVIHGTE------DDVVNWLHGNKLWKMARDP-YEPL--WI--KGGGHCNLELYP 147 (190)
Q Consensus 83 ~~~~~~~~-~~~-~~~~--~~~~P~l~i~g~~------D~~v~~~~~~~~~~~~~~~-~~~~--~~--~~~~H~~~~~~~ 147 (190)
.....+.+ +.. .... .-.+.+++|.|+- |..||+..+...+..+.+. ..++ ++ +++.|.-+.+.+
T Consensus 195 ~~~~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~ 274 (288)
T COG4814 195 PGLIKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENP 274 (288)
T ss_pred ccccCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCCh
Confidence 00010110 000 0111 1246799999984 7788988888888777765 2232 24 457898888888
Q ss_pred HHHHHHHHHHHH
Q 035673 148 DYIRHLCRFIQE 159 (190)
Q Consensus 148 ~~~~~i~~~l~~ 159 (190)
.+...+..||-+
T Consensus 275 ~v~~yv~~FLw~ 286 (288)
T COG4814 275 TVAKYVKNFLWE 286 (288)
T ss_pred hHHHHHHHHhhc
Confidence 899999999854
No 133
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.71 E-value=2.5e-07 Score=72.14 Aligned_cols=135 Identities=19% Similarity=0.235 Sum_probs=96.6
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccccccc--------
Q 035673 16 SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTFC-------- 86 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~-------- 86 (190)
.+...|..++.++|.+.--.+.+.++++|-|.||+++-..+...| .++++|+..||.+.+..+......+.
T Consensus 505 ~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWG 584 (682)
T COG1770 505 KNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWG 584 (682)
T ss_pred cccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhC
Confidence 456779888999998875446789999999999999999999999 89999999999987766654433321
Q ss_pred ----------hhhhcchhhhhcC-CCceEEEEcCCCceeechhHHHHHHHhCCC---CceEEe---cCCCcCCCCChhHH
Q 035673 87 ----------CDIYKNINKIKKV-KCPVLVIHGTEDDVVNWLHGNKLWKMARDP---YEPLWI---KGGGHCNLELYPDY 149 (190)
Q Consensus 87 ----------~~~~~~~~~~~~~-~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~---~~~~~~---~~~~H~~~~~~~~~ 149 (190)
...+.+.+++..- -.|+|+..|..|+.|..-+..++..+++.. ...+++ -++||.......+.
T Consensus 585 NP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~ 664 (682)
T COG1770 585 NPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQR 664 (682)
T ss_pred CcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHH
Confidence 1112333344332 378999999999999988777877766532 112222 46899766555544
Q ss_pred H
Q 035673 150 I 150 (190)
Q Consensus 150 ~ 150 (190)
+
T Consensus 665 l 665 (682)
T COG1770 665 L 665 (682)
T ss_pred H
Confidence 4
No 134
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.71 E-value=5.1e-07 Score=65.67 Aligned_cols=62 Identities=23% Similarity=0.229 Sum_probs=43.6
Q ss_pred CCCceEEEEcCCCceeechhHHHHHHHhCC----CCceEEecCCCcCCCCChhHHHHHHHHHHHHhhc
Q 035673 99 VKCPVLVIHGTEDDVVNWLHGNKLWKMARD----PYEPLWIKGGGHCNLELYPDYIRHLCRFIQEMEN 162 (190)
Q Consensus 99 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~~~ 162 (190)
.+.|+++.+|..|.++|+..+..+.+.+.. ..+++.+++.+|.... ..-......||.+.+.
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~--~~~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA--FASAPDALAWLDDRFA 283 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh--hcCcHHHHHHHHHHHC
Confidence 368999999999999999999888875432 2345567788996321 1122556678877664
No 135
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.67 E-value=3.6e-07 Score=63.84 Aligned_cols=123 Identities=15% Similarity=0.137 Sum_probs=81.1
Q ss_pred CchhhhHHHHHHHHHHHhC--------CCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCCcchhhhhhhccccc
Q 035673 16 SNTYADIEAVYQCLQTEYG--------VSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGILSGLRVLCHVKFT 84 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~~~--------~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~~~~~~~~~~~~~~ 84 (190)
..-.++..++++|+.+.+. .+..++.++|||.||-.|..+|..+. +++++|.+.|+...-.... ...
T Consensus 90 ~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~--t~P 167 (307)
T PF07224_consen 90 QDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQ--TPP 167 (307)
T ss_pred hHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCC--CCC
Confidence 4456788889999988642 24579999999999999999998874 7899999998765322111 101
Q ss_pred cchhhhcchhhhhcCCCceEEEEcCCC-------ceeech--hHHHHHHHhCCCCceEEecCCCcCCC
Q 035673 85 FCCDIYKNINKIKKVKCPVLVIHGTED-------DVVNWL--HGNKLWKMARDPYEPLWIKGGGHCNL 143 (190)
Q Consensus 85 ~~~~~~~~~~~~~~~~~P~l~i~g~~D-------~~v~~~--~~~~~~~~~~~~~~~~~~~~~~H~~~ 143 (190)
.... ....--++.+|+++|...-- +-+.++ .-++++..++.++...+..+.||..+
T Consensus 168 ~iLt---y~p~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~hfV~~dYGHmDm 232 (307)
T PF07224_consen 168 PILT---YVPQSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPCAHFVAKDYGHMDM 232 (307)
T ss_pred Ceee---cCCcccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcccceeeeecccccccc
Confidence 0101 10111146689999875544 222222 44678888888777777788999743
No 136
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.66 E-value=8.3e-08 Score=68.39 Aligned_cols=93 Identities=23% Similarity=0.245 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhcc--ccc-cchhhhcchh--h
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHV--KFT-FCCDIYKNIN--K 95 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~--~ 95 (190)
..+++.++.+++.+...+..|+|+||||..|+.++.++| .+.+++++||.......+... ... ...+.+.... .
T Consensus 99 ~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 178 (251)
T PF00756_consen 99 TEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALS 178 (251)
T ss_dssp HTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHH
T ss_pred hccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhh
Confidence 457888888888766555899999999999999999999 899999999875432111100 000 0111111111 1
Q ss_pred hhcCCCceEEEEcCCCcee
Q 035673 96 IKKVKCPVLVIHGTEDDVV 114 (190)
Q Consensus 96 ~~~~~~P~l~i~g~~D~~v 114 (190)
...-..++++..|..|...
T Consensus 179 ~~~~~~~i~l~~G~~d~~~ 197 (251)
T PF00756_consen 179 QKKKPLRIYLDVGTKDEFG 197 (251)
T ss_dssp HTTSEEEEEEEEETTSTTH
T ss_pred cccCCCeEEEEeCCCCccc
Confidence 2334577888999999843
No 137
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.61 E-value=3.7e-07 Score=68.62 Aligned_cols=140 Identities=14% Similarity=0.153 Sum_probs=96.0
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC----ccceeeecCCcchhh--------------------
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP----RLRGVVLHSGILSGL-------------------- 75 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~----~v~~~v~~~~~~~~~-------------------- 75 (190)
.|+.+.++++.+.-+. ++++.+|||.|+.....++...| +|+.+++++|.....
T Consensus 145 yDLPA~IdyIL~~T~~--~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~ 222 (403)
T KOG2624|consen 145 YDLPAMIDYILEKTGQ--EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLL 222 (403)
T ss_pred cCHHHHHHHHHHhccc--cceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHHhhhhhhhhhhHH
Confidence 4999999999998754 89999999999999999998886 589999999843100
Q ss_pred hh--------------------hhccc-----------------------------------------------------
Q 035673 76 RV--------------------LCHVK----------------------------------------------------- 82 (190)
Q Consensus 76 ~~--------------------~~~~~----------------------------------------------------- 82 (190)
.. .+...
T Consensus 223 ~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~ 302 (403)
T KOG2624|consen 223 PLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSG 302 (403)
T ss_pred HHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCC
Confidence 00 00000
Q ss_pred ----ccc--------chhhhcchhhhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCc--eEEecCCCcCCCC----
Q 035673 83 ----FTF--------CCDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYE--PLWIKGGGHCNLE---- 144 (190)
Q Consensus 83 ----~~~--------~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~--~~~~~~~~H~~~~---- 144 (190)
+.+ ......+.-.+.++++|+.+++|++|.++.++....+...+..... .+.+++-.|..+.
T Consensus 303 ~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~d 382 (403)
T KOG2624|consen 303 KFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLD 382 (403)
T ss_pred CccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccC
Confidence 000 0000011224566789999999999999999999988877665533 2226888997432
Q ss_pred ChhHHHHHHHHHHHHhh
Q 035673 145 LYPDYIRHLCRFIQEME 161 (190)
Q Consensus 145 ~~~~~~~~i~~~l~~~~ 161 (190)
-.+++.+.|.+.++...
T Consensus 383 a~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 383 AKEEVYDPVIERLRLFE 399 (403)
T ss_pred cHHHHHHHHHHHHHhhh
Confidence 23457788888877654
No 138
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.55 E-value=3.3e-07 Score=70.72 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=74.9
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcC--ccceeeecCCcchhhhhhhccccccchhhhcchhhhhcCCCceEEEEcCCCce
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLP--RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKVKCPVLVIHGTEDDV 113 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 113 (190)
+..+|+++|.|||+.++.+...... .|+++|+++=..+..+... -...+.+-.++.|+|++.|.+|..
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr----------girDE~Lldmk~PVLFV~Gsnd~m 317 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR----------GIRDEALLDMKQPVLFVIGSNDHM 317 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc----------CCcchhhHhcCCceEEEecCCccc
Confidence 5579999999999888887776655 5778887763333221110 112345567899999999999999
Q ss_pred eechhHHHHHHHhCCCCceEEecCCCcCC
Q 035673 114 VNWLHGNKLWKMARDPYEPLWIKGGGHCN 142 (190)
Q Consensus 114 v~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 142 (190)
+++...+.+.+++....+++++.+++|.+
T Consensus 318 cspn~ME~vreKMqA~~elhVI~~adhsm 346 (784)
T KOG3253|consen 318 CSPNSMEEVREKMQAEVELHVIGGADHSM 346 (784)
T ss_pred CCHHHHHHHHHHhhccceEEEecCCCccc
Confidence 99999999999999888999999999963
No 139
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.54 E-value=5.4e-07 Score=68.54 Aligned_cols=116 Identities=14% Similarity=0.120 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHhCC--CCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccccccchhhhcchhhhhc
Q 035673 22 IEAVYQCLQTEYGV--SQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKK 98 (190)
Q Consensus 22 ~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (190)
..+++-++.+.+.+ +.++.+|+|+||||..|+.++.++| .+.+++.+||..-..... ........+.... .....
T Consensus 270 ~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~-~~~~~~l~~~l~~-~~~~~ 347 (411)
T PRK10439 270 QQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRG-GQQEGVLLEQLKA-GEVSA 347 (411)
T ss_pred HHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCcc-CCchhHHHHHHHh-cccCC
Confidence 45666777777654 5568999999999999999999999 899999999853100000 0000001111100 00111
Q ss_pred CCCceEEEEcCCCceeechhHHHHHHHhCC---CCceEEecCCCcC
Q 035673 99 VKCPVLVIHGTEDDVVNWLHGNKLWKMARD---PYEPLWIKGGGHC 141 (190)
Q Consensus 99 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~---~~~~~~~~~~~H~ 141 (190)
....+++-.|..|... ....+.+.+.+.. ...+.+++| ||.
T Consensus 348 ~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd 391 (411)
T PRK10439 348 RGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHD 391 (411)
T ss_pred CCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcC
Confidence 2346778889888644 3455666666553 245566765 783
No 140
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.46 E-value=2e-06 Score=67.00 Aligned_cols=146 Identities=16% Similarity=0.091 Sum_probs=96.3
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccccccchhh-----
Q 035673 16 SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVKFTFCCDI----- 89 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~~~~~~~~----- 89 (190)
.+..+|..+..++|.+.--..++++.+.|.|.||.++..++.++| .+.++++--|+.+.++.............
T Consensus 527 qN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g 606 (712)
T KOG2237|consen 527 QNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWG 606 (712)
T ss_pred cccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccC
Confidence 567889999999999986667789999999999999999999999 78899999999887765433322221111
Q ss_pred ----------hcchhhhhcC-----CCceEEEEcCCCceeechhHHHHHHHhCC----C------CceEEecCCCcCCCC
Q 035673 90 ----------YKNINKIKKV-----KCPVLVIHGTEDDVVNWLHGNKLWKMARD----P------YEPLWIKGGGHCNLE 144 (190)
Q Consensus 90 ----------~~~~~~~~~~-----~~P~l~i~g~~D~~v~~~~~~~~~~~~~~----~------~~~~~~~~~~H~~~~ 144 (190)
+.+.....++ -.-+|+..+.+|..|.+.++..+.+.++. . .-+.+..++||+.-.
T Consensus 607 ~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~ 686 (712)
T KOG2237|consen 607 NPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEK 686 (712)
T ss_pred ChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCC
Confidence 1111122222 13578888899888877666666554431 1 123345789997533
Q ss_pred ChhH---HHHHHHHHHHHhh
Q 035673 145 LYPD---YIRHLCRFIQEME 161 (190)
Q Consensus 145 ~~~~---~~~~i~~~l~~~~ 161 (190)
.... .......||.+..
T Consensus 687 ~~~k~~~E~a~~yaFl~K~~ 706 (712)
T KOG2237|consen 687 PRFKQIEEAAFRYAFLAKML 706 (712)
T ss_pred chHHHHHHHHHHHHHHHHHh
Confidence 3222 3344566666654
No 141
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.45 E-value=7.3e-07 Score=62.44 Aligned_cols=54 Identities=13% Similarity=0.111 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHHh---CCCCCcEEEEEEccChHHHHHHHhhcC----ccceeeecCCcch
Q 035673 20 ADIEAVYQCLQTEY---GVSQEDLILYGQSVGSGPTLHLASKLP----RLRGVVLHSGILS 73 (190)
Q Consensus 20 ~d~~~~~~~~~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~~----~v~~~v~~~~~~~ 73 (190)
+-+.+.++.+.+.+ ....++++++||||||.++-.++...+ .++.+|.++.+..
T Consensus 64 ~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 64 EFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred HHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 34566677776666 235689999999999999888876543 5889998776543
No 142
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.45 E-value=2.8e-07 Score=69.38 Aligned_cols=88 Identities=22% Similarity=0.242 Sum_probs=49.9
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhccccccchhhhcchhhhhcCCCceEEEEcCCCceee
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKVKCPVLVIHGTEDDVVN 115 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~ 115 (190)
|.++++++|||+||..++.++....++++.|++.|+.-++.. .....++.|+|+|.++.=. .
T Consensus 226 D~~~i~~~GHSFGGATa~~~l~~d~r~~~~I~LD~W~~Pl~~----------------~~~~~i~~P~L~InSe~f~--~ 287 (379)
T PF03403_consen 226 DLSRIGLAGHSFGGATALQALRQDTRFKAGILLDPWMFPLGD----------------EIYSKIPQPLLFINSESFQ--W 287 (379)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHH-TT--EEEEES---TTS-G----------------GGGGG--S-EEEEEETTT----
T ss_pred chhheeeeecCchHHHHHHHHhhccCcceEEEeCCcccCCCc----------------ccccCCCCCEEEEECcccC--C
Confidence 456899999999999999999888899999999887542211 1225678999999887532 2
Q ss_pred chhHHHHHHHhC--CCCceEEecCCCcC
Q 035673 116 WLHGNKLWKMAR--DPYEPLWIKGGGHC 141 (190)
Q Consensus 116 ~~~~~~~~~~~~--~~~~~~~~~~~~H~ 141 (190)
......+.+... ....++.+.|..|.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~ti~gt~H~ 315 (379)
T PF03403_consen 288 WENIFRMKKVISNNKESRMLTIKGTAHL 315 (379)
T ss_dssp HHHHHHHHTT--TTS-EEEEEETT--GG
T ss_pred hhhHHHHHHHhccCCCcEEEEECCCcCC
Confidence 223333333222 22467778999995
No 143
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.42 E-value=8.2e-07 Score=65.19 Aligned_cols=128 Identities=16% Similarity=0.122 Sum_probs=77.1
Q ss_pred hhhHHHHHHHHHHH---h----CCCCCcEEEEEEccChHHHHHHHhhcCcccee---------eecCCcchhhhhhhc-c
Q 035673 19 YADIEAVYQCLQTE---Y----GVSQEDLILYGQSVGSGPTLHLASKLPRLRGV---------VLHSGILSGLRVLCH-V 81 (190)
Q Consensus 19 ~~d~~~~~~~~~~~---~----~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~---------v~~~~~~~~~~~~~~-~ 81 (190)
..|+..+++++.+. . .++..+|.++|||+||..++.++.-+.....+ +...+.....+.... .
T Consensus 133 p~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~ 212 (365)
T COG4188 133 PLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCA 212 (365)
T ss_pred cccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhcccc
Confidence 35899999999988 2 24678999999999999999988655321111 111111100000000 0
Q ss_pred --------------cccc--chhh----hcchhhhhcCCCceEEEEcCCCceeech-hHHHHHHHhCCC-CceEEecCCC
Q 035673 82 --------------KFTF--CCDI----YKNINKIKKVKCPVLVIHGTEDDVVNWL-HGNKLWKMARDP-YEPLWIKGGG 139 (190)
Q Consensus 82 --------------~~~~--~~~~----~~~~~~~~~~~~P~l~i~g~~D~~v~~~-~~~~~~~~~~~~-~~~~~~~~~~ 139 (190)
+... ..+. .-....+.+++.|++++.|..|.+.|+. ...+.+..+++. ..+..++++.
T Consensus 213 av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~ 292 (365)
T COG4188 213 AVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGAT 292 (365)
T ss_pred ccccchhhhccccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCc
Confidence 0000 0000 0012456778999999999999977664 444555666665 4567789999
Q ss_pred cCCCCCh
Q 035673 140 HCNLELY 146 (190)
Q Consensus 140 H~~~~~~ 146 (190)
|+.+.+.
T Consensus 293 h~sfl~~ 299 (365)
T COG4188 293 HFSFLEL 299 (365)
T ss_pred ccccccc
Confidence 9865443
No 144
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.34 E-value=2.3e-07 Score=62.71 Aligned_cols=110 Identities=15% Similarity=0.187 Sum_probs=68.1
Q ss_pred CCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhc-c-------ccccchhhhcchh---hhhcCCC
Q 035673 34 GVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCH-V-------KFTFCCDIYKNIN---KIKKVKC 101 (190)
Q Consensus 34 ~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~---~~~~~~~ 101 (190)
.+++.++.|.||||||.-|+..+.+.+ +.+++-.++|+.++..-... . .-...++.++.-. ..+....
T Consensus 137 pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~ 216 (283)
T KOG3101|consen 137 PLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGD 216 (283)
T ss_pred cccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhhcccCCChHHHhhcchHHHHHhcCCCCc
Confidence 357789999999999999999999988 88888888887664321110 0 0111122333333 3344556
Q ss_pred ceEEEEcCCCceeechhH-HHHHHHhCC----CCceEEecCCCcCCC
Q 035673 102 PVLVIHGTEDDVVNWLHG-NKLWKMARD----PYEPLWIKGGGHCNL 143 (190)
Q Consensus 102 P~l~i~g~~D~~v~~~~~-~~~~~~~~~----~~~~~~~~~~~H~~~ 143 (190)
-+||=+|..|.+...+.. +.+.+..+. +..+...+|..|...
T Consensus 217 ~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYy 263 (283)
T KOG3101|consen 217 DILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYY 263 (283)
T ss_pred cEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCccee
Confidence 799999999998873221 223333332 233444678888643
No 145
>COG0627 Predicted esterase [General function prediction only]
Probab=98.33 E-value=6.2e-06 Score=60.41 Aligned_cols=136 Identities=18% Similarity=0.170 Sum_probs=78.2
Q ss_pred HHHHHHHHHhCCCC--CcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhcc------------------c
Q 035673 24 AVYQCLQTEYGVSQ--EDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHV------------------K 82 (190)
Q Consensus 24 ~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~------------------~ 82 (190)
++-..+.+.+..+. +...|+||||||.-|+.+|+++| +++.+..++|+.+........ .
T Consensus 136 ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~ 215 (316)
T COG0627 136 ELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPD 215 (316)
T ss_pred hhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHHHhcCCC
Confidence 33445555554443 27899999999999999999997 999999999877644111110 0
Q ss_pred cccchhhhcchhhhhc--------------CCCceEEEEcCCCceee-c-hhHHHHHHHhC---CCCceEEecCCCcCCC
Q 035673 83 FTFCCDIYKNINKIKK--------------VKCPVLVIHGTEDDVVN-W-LHGNKLWKMAR---DPYEPLWIKGGGHCNL 143 (190)
Q Consensus 83 ~~~~~~~~~~~~~~~~--------------~~~P~l~i~g~~D~~v~-~-~~~~~~~~~~~---~~~~~~~~~~~~H~~~ 143 (190)
....+..+++...+.+ ...++++-.|..|.+.. . ...+.+.+++. .+..+...+++.|...
T Consensus 216 ~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~ 295 (316)
T COG0627 216 SDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWY 295 (316)
T ss_pred ccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHH
Confidence 0111122222222221 34667777888888775 2 23445555444 4445666677888422
Q ss_pred CChhHHHHHHHHHHHHh
Q 035673 144 ELYPDYIRHLCRFIQEM 160 (190)
Q Consensus 144 ~~~~~~~~~i~~~l~~~ 160 (190)
. -.........|+...
T Consensus 296 ~-w~~~l~~~~~~~a~~ 311 (316)
T COG0627 296 F-WASQLADHLPWLAGA 311 (316)
T ss_pred H-HHHHHHHHHHHHHHH
Confidence 1 123444455555443
No 146
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.29 E-value=1.5e-05 Score=62.11 Aligned_cols=71 Identities=21% Similarity=0.203 Sum_probs=59.0
Q ss_pred CCCCCCCCCCCCCCCc--hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch
Q 035673 2 DYSGYGASTGKPSESN--TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS 73 (190)
Q Consensus 2 D~~G~G~s~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~ 73 (190)
|.||.|.|++...... -.+|-.+.|+|+.++.. ...++..+|.|++|+..+.+|+..| .+++++..++..+
T Consensus 87 DvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpW-sNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 87 DVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPW-SNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cccccccCCcccceeccccccchhHHHHHHHhCCc-cCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 8999999998765533 35689999999999866 4579999999999999999998877 8888888777443
No 147
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.29 E-value=1.5e-05 Score=56.90 Aligned_cols=56 Identities=23% Similarity=0.361 Sum_probs=48.4
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcc
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGIL 72 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~ 72 (190)
+....+.++++.+..+++++++++++.|.|-||.++..++..+| .+.++..+++..
T Consensus 123 ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 123 DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 34556888899999999999999999999999999999999999 777777777654
No 148
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.25 E-value=1e-05 Score=56.78 Aligned_cols=57 Identities=18% Similarity=0.260 Sum_probs=45.6
Q ss_pred eEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcC--CCCChhHHHHHHHHHHHHhh
Q 035673 103 VLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHC--NLELYPDYIRHLCRFIQEME 161 (190)
Q Consensus 103 ~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~--~~~~~~~~~~~i~~~l~~~~ 161 (190)
+.++.+++|.++|...+..+.+.+++. ++.+++ +||. ++..+..+.+.|.+-|++..
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~-eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGC-EVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCC-EEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 577889999999998888888888875 888887 7996 45555678899999988764
No 149
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.22 E-value=3.6e-05 Score=56.62 Aligned_cols=124 Identities=15% Similarity=0.205 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC--ccceeeecCCcchhhhhhhccccccchhhhcchhhhhcC
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP--RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKV 99 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (190)
+.+++.++.+. ...+++|+||+.|+..++.+....+ .+.++|+++++...... .......+.++
T Consensus 180 i~Aa~~~~~~~---~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~-----------n~~l~~~la~l 245 (310)
T PF12048_consen 180 IEAAIAFAQQQ---GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDR-----------NPALAEQLAQL 245 (310)
T ss_pred HHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchh-----------hhhHHHHhhcc
Confidence 34444444433 3356999999999999999999887 68999999997652221 12223567789
Q ss_pred CCceEEEEcCCCceeechhHHHHHH---HhC-CCCceEEecCCCcCCCCChhHHHHHHHHHHHHh
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWK---MAR-DPYEPLWIKGGGHCNLELYPDYIRHLCRFIQEM 160 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~---~~~-~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~ 160 (190)
+.|+|=|++.+...+ ...+..-.. +.. ..++.+-+.+..|..........++|..||+++
T Consensus 246 ~iPvLDi~~~~~~~~-~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 246 KIPVLDIYSADNPAS-QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred CCCEEEEecCCChHH-HHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 999999998884332 222222111 111 123445566666644333334789999999764
No 150
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.17 E-value=2.1e-05 Score=54.08 Aligned_cols=66 Identities=23% Similarity=0.283 Sum_probs=41.4
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc---C-ccceeeecCC
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL---P-RLRGVVLHSG 70 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~---~-~v~~~v~~~~ 70 (190)
+|++|++.+.... ......+....+.+.+.. ...+++++|||+||.++..++... + .+.+++++.+
T Consensus 31 ~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~--~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 31 LPLPGFGPGEPLP--ASADALVEAQAEAVLRAA--GGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred ecCCCCCCCCCCC--CCHHHHHHHHHHHHHHhc--CCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 3677887554322 122222333444554443 346899999999999998888753 2 5778877654
No 151
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.14 E-value=5.6e-06 Score=64.18 Aligned_cols=145 Identities=21% Similarity=0.175 Sum_probs=99.3
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhhhhhhccc-ccc--------
Q 035673 16 SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGLRVLCHVK-FTF-------- 85 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~~~~~~~~-~~~-------- 85 (190)
+..++|..++.+.|.++---.++++.+.|-|-||.+.-.+..++| .+.++++--|+.+.++...-.. ..+
T Consensus 478 q~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd 557 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPD 557 (648)
T ss_pred hhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhcCCCC
Confidence 456789999999998884446789999999999999988888999 7888888888888665432111 111
Q ss_pred ------chhhhcchhhhhc--CCCceEEEEcCCCceeechhHHHHHHHhCCC-CceEEe--cCCCcCCCCChhH---HHH
Q 035673 86 ------CCDIYKNINKIKK--VKCPVLVIHGTEDDVVNWLHGNKLWKMARDP-YEPLWI--KGGGHCNLELYPD---YIR 151 (190)
Q Consensus 86 ------~~~~~~~~~~~~~--~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~-~~~~~~--~~~~H~~~~~~~~---~~~ 151 (190)
....+.+.++++. .-.|+||-.+..|..|.+.++..++..+... ....++ -++||..-....+ ...
T Consensus 558 ~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a 637 (648)
T COG1505 558 DPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELA 637 (648)
T ss_pred CHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHH
Confidence 1122333444433 2269999999999999999999998877643 222332 3689975443333 334
Q ss_pred HHHHHHHHh
Q 035673 152 HLCRFIQEM 160 (190)
Q Consensus 152 ~i~~~l~~~ 160 (190)
.+..||.+.
T Consensus 638 ~~~afl~r~ 646 (648)
T COG1505 638 DLLAFLLRT 646 (648)
T ss_pred HHHHHHHHh
Confidence 556666654
No 152
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.14 E-value=8.3e-05 Score=57.15 Aligned_cols=48 Identities=10% Similarity=0.230 Sum_probs=34.7
Q ss_pred hhhcCCCceEEEEcCCCceeechhHHHHHHH-------hCCCCceE---EecCCCcCC
Q 035673 95 KIKKVKCPVLVIHGTEDDVVNWLHGNKLWKM-------ARDPYEPL---WIKGGGHCN 142 (190)
Q Consensus 95 ~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~-------~~~~~~~~---~~~~~~H~~ 142 (190)
.+++|++|++++.+..|.++|++++..+... +....+.+ +.+..||..
T Consensus 292 DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLG 349 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLG 349 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceE
Confidence 5788999999999999999999988766532 22222222 246789963
No 153
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.10 E-value=4e-05 Score=66.71 Aligned_cols=151 Identities=7% Similarity=-0.006 Sum_probs=81.0
Q ss_pred CCCCCCCCCCCCCCCchhhhHHH-HHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc---C-ccceeeecCCcchhhh
Q 035673 2 DYSGYGASTGKPSESNTYADIEA-VYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL---P-RLRGVVLHSGILSGLR 76 (190)
Q Consensus 2 D~~G~G~s~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~---~-~v~~~v~~~~~~~~~~ 76 (190)
|+||+|.+.. . ....+++.+ .++.+.+ .. ...+++++||||||.++..+|.+. + ++..+++++++.....
T Consensus 1101 ~~~g~~~~~~--~-~~~l~~la~~~~~~i~~-~~-~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~ 1175 (1296)
T PRK10252 1101 QSPRPDGPMQ--T-ATSLDEVCEAHLATLLE-QQ-PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQ 1175 (1296)
T ss_pred ECCCCCCCCC--C-CCCHHHHHHHHHHHHHh-hC-CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccc
Confidence 6788875431 1 122333322 3333333 22 235899999999999999999863 4 7888888775432110
Q ss_pred ---h----------hhccc--cc----------------cchhhhcch------hhhhcCCCceEEEEcCCCceeechhH
Q 035673 77 ---V----------LCHVK--FT----------------FCCDIYKNI------NKIKKVKCPVLVIHGTEDDVVNWLHG 119 (190)
Q Consensus 77 ---~----------~~~~~--~~----------------~~~~~~~~~------~~~~~~~~P~l~i~g~~D~~v~~~~~ 119 (190)
. ..... .. .....+... .....+.+|++++.+..|........
T Consensus 1176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 (1296)
T PRK10252 1176 NWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPE 1255 (1296)
T ss_pred cccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcc
Confidence 0 00000 00 000000000 01234568999999999876655555
Q ss_pred HHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHHHh
Q 035673 120 NKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQEM 160 (190)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~ 160 (190)
..+.+.. +......+ +++|+.+...+ ....+.+++.+.
T Consensus 1256 ~~W~~~~-~~~~~~~v-~g~H~~~~~~~-~~~~~~~~l~~~ 1293 (1296)
T PRK10252 1256 QAWSPWI-AELDVYRQ-DCAHVDIISPE-AFEKIGPILRAT 1293 (1296)
T ss_pred cchhhhc-CCCEEEEC-CCCHHHHCCcH-HHHHHHHHHHHH
Confidence 5555544 44466666 56897655433 345555555543
No 154
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.10 E-value=1.5e-05 Score=48.82 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=51.7
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCC-CChhHHHHHHHHHHHHh
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNL-ELYPDYIRHLCRFIQEM 160 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~-~~~~~~~~~i~~~l~~~ 160 (190)
..|+|++.++.|+.+|.+.++.+.+.+.+. .++.+++.||..+ ...+-+.+.+.+||..-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s-~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGS-RLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCc-eEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 589999999999999999999999999985 8999999999866 44455778888998753
No 155
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.06 E-value=8.5e-05 Score=51.83 Aligned_cols=138 Identities=9% Similarity=0.087 Sum_probs=83.6
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCCcchhhhh----------------
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGILSGLRV---------------- 77 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~~~~~~~---------------- 77 (190)
+..+.+..-++++++..- ...+++++|||-|+++.+.++.... .+..++++-|-...+..
T Consensus 90 sL~~QV~HKlaFik~~~P-k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~h 168 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYVP-KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPH 168 (301)
T ss_pred chhhHHHHHHHHHHHhCC-CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehh
Confidence 344567788889988764 4579999999999999999987432 56666666662211000
Q ss_pred -------------------h------hccc---------------------cccchhhhc-----chhhhhcCCCceEEE
Q 035673 78 -------------------L------CHVK---------------------FTFCCDIYK-----NINKIKKVKCPVLVI 106 (190)
Q Consensus 78 -------------------~------~~~~---------------------~~~~~~~~~-----~~~~~~~~~~P~l~i 106 (190)
+ ...+ .....+.+. ..+.+.+-.+-+.+.
T Consensus 169 v~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fy 248 (301)
T KOG3975|consen 169 VVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFY 248 (301)
T ss_pred hhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEE
Confidence 0 0000 000000000 112334446788999
Q ss_pred EcCCCceeechhHHHHHHHhCCCCceEE-ecCCCcCCCCChhH-HHHHHHHH
Q 035673 107 HGTEDDVVNWLHGNKLWKMARDPYEPLW-IKGGGHCNLELYPD-YIRHLCRF 156 (190)
Q Consensus 107 ~g~~D~~v~~~~~~~~~~~~~~~~~~~~-~~~~~H~~~~~~~~-~~~~i~~~ 156 (190)
+|.+|.+||.+....+.+.++.. ++.+ ..+..|.+.....+ ....+.+.
T Consensus 249 ygt~DgW~p~~~~d~~kdd~~ee-d~~Ldedki~HAFV~~~~q~ma~~v~d~ 299 (301)
T KOG3975|consen 249 YGTNDGWVPSHYYDYYKDDVPEE-DLKLDEDKIPHAFVVKHAQYMANAVFDM 299 (301)
T ss_pred ccCCCCCcchHHHHHHhhhcchh-ceeeccccCCcceeecccHHHHHHHHHh
Confidence 99999999988888888888765 2222 36788866544433 44555443
No 156
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.03 E-value=1.4e-05 Score=57.39 Aligned_cols=88 Identities=15% Similarity=0.126 Sum_probs=58.6
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhccccccchhhhcchhhhhcCCCceEEEEcCCCceee
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKVKCPVLVIHGTEDDVVN 115 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~ 115 (190)
+..++.|+|||+||..++...+.+.+++..|++.++.-+++. ....+++.|+++|.-+ |...
T Consensus 239 ~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~WM~Pl~~----------------~~~~~arqP~~finv~-~fQ~- 300 (399)
T KOG3847|consen 239 DTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAWMFPLDQ----------------LQYSQARQPTLFINVE-DFQW- 300 (399)
T ss_pred hhhhhhheeccccchhhhhhhccccceeeeeeeeeeecccch----------------hhhhhccCCeEEEEcc-cccc-
Confidence 567899999999999999988887789988888765432221 2345778899999833 3222
Q ss_pred chhHHHHHHHhCCC--CceEEecCCCcC
Q 035673 116 WLHGNKLWKMARDP--YEPLWIKGGGHC 141 (190)
Q Consensus 116 ~~~~~~~~~~~~~~--~~~~~~~~~~H~ 141 (190)
.+....+.+-...+ ..++.+.|+-|-
T Consensus 301 ~en~~vmKki~~~n~g~~~it~~GsVHq 328 (399)
T KOG3847|consen 301 NENLLVMKKIESQNEGNHVITLDGSVHQ 328 (399)
T ss_pred hhHHHHHHhhhCCCccceEEEEccceec
Confidence 23333333333322 356677888884
No 157
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.92 E-value=0.00019 Score=50.87 Aligned_cols=59 Identities=19% Similarity=0.281 Sum_probs=44.5
Q ss_pred CCCceEEEEcCCCceeechhHHHHHHHhCCC---CceEEecCCCcCCC--CChhHHHHHHHHHH
Q 035673 99 VKCPVLVIHGTEDDVVNWLHGNKLWKMARDP---YEPLWIKGGGHCNL--ELYPDYIRHLCRFI 157 (190)
Q Consensus 99 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~--~~~~~~~~~i~~~l 157 (190)
..+|-++++++.|.+++.+..++..+...+. +....+++..|..+ ..++++++.+.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4689999999999999999888887755432 35555788999743 33456888888774
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=97.91 E-value=0.00043 Score=45.48 Aligned_cols=129 Identities=15% Similarity=0.223 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhc----cccccchhhh------
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCH----VKFTFCCDIY------ 90 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~----~~~~~~~~~~------ 90 (190)
.+.+-++.+.+..+ .+...|+|-|+||+.|-+++.++. +++ |+++|...+.+.+.. ......-..+
T Consensus 44 ~a~~ele~~i~~~~--~~~p~ivGssLGGY~At~l~~~~G-ira-v~~NPav~P~e~l~gylg~~en~ytg~~y~le~~h 119 (191)
T COG3150 44 QALKELEKAVQELG--DESPLIVGSSLGGYYATWLGFLCG-IRA-VVFNPAVRPYELLTGYLGRPENPYTGQEYVLESRH 119 (191)
T ss_pred HHHHHHHHHHHHcC--CCCceEEeecchHHHHHHHHHHhC-Chh-hhcCCCcCchhhhhhhcCCCCCCCCcceEEeehhh
Confidence 33344444444443 355899999999999999999886 444 455665443333211 1101000111
Q ss_pred -cc--hhhhhcCCC-ceEEEEcCC-CceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHH
Q 035673 91 -KN--INKIKKVKC-PVLVIHGTE-DDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQ 158 (190)
Q Consensus 91 -~~--~~~~~~~~~-P~l~i~g~~-D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~ 158 (190)
.. ...++.++. ..+.+.... |.+.+...+...+... ..++.+|+.|-+ ..-....+.|..|..
T Consensus 120 I~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~----~~~V~dgg~H~F-~~f~~~l~~i~aF~g 187 (191)
T COG3150 120 IATLCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPC----YEIVWDGGDHKF-KGFSRHLQRIKAFKG 187 (191)
T ss_pred HHHHHHhhccccCCCcEEEeecccccHHHHHHHHHHHhhhh----hheeecCCCccc-cchHHhHHHHHHHhc
Confidence 11 112334443 345555555 9988887777666543 556777888854 334567788888864
No 159
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.89 E-value=0.00012 Score=50.33 Aligned_cols=55 Identities=18% Similarity=0.391 Sum_probs=39.5
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc--C-ccceeeecCCcch
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL--P-RLRGVVLHSGILS 73 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--~-~v~~~v~~~~~~~ 73 (190)
...+|+..+++.+... + ..+.++++|||.|+.-.+.+...- + .+.+.|+.+|..+
T Consensus 88 ~D~edl~~l~~Hi~~~-~-fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 88 DDVEDLKCLLEHIQLC-G-FSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred ccHHHHHHHHHHhhcc-C-cccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 3466777777755433 1 235899999999999998888332 3 6888889998755
No 160
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.87 E-value=3.9e-05 Score=62.50 Aligned_cols=23 Identities=13% Similarity=0.180 Sum_probs=20.6
Q ss_pred CCCcEEEEEEccChHHHHHHHhh
Q 035673 36 SQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
+..+++++||||||+++..++..
T Consensus 553 ~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 553 DGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CCCcEEEEecCHHHHHHHHHHHh
Confidence 45799999999999999999875
No 161
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.87 E-value=6.9e-05 Score=55.17 Aligned_cols=138 Identities=15% Similarity=0.093 Sum_probs=89.7
Q ss_pred hHHHHHHHHHHHhC-CCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCc-ch-------hhhhh-------------
Q 035673 21 DIEAVYQCLQTEYG-VSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGI-LS-------GLRVL------------- 78 (190)
Q Consensus 21 d~~~~~~~~~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~-~~-------~~~~~------------- 78 (190)
-+.++++...+.+. +..+.+.|-|.|--|..++..|...|++.+++.+.-= .+ -.+..
T Consensus 216 a~srAMdlAq~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyya 295 (507)
T COG4287 216 AVSRAMDLAQDELEQVEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYA 295 (507)
T ss_pred HHHHHHHHHHhhhhheeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHh
Confidence 34444544444331 2447899999999999999999999988887754320 00 00000
Q ss_pred -------hccccccchhhhcchhhh-----hcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCCh
Q 035673 79 -------CHVKFTFCCDIYKNINKI-----KKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELY 146 (190)
Q Consensus 79 -------~~~~~~~~~~~~~~~~~~-----~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 146 (190)
....+....+..++.... .++..|-.++.+..|.++.++.+...++.+++.+.+.++|+..|....
T Consensus 296 egi~erl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n-- 373 (507)
T COG4287 296 EGIDERLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN-- 373 (507)
T ss_pred hhHHHhhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH--
Confidence 000111122233333333 567899999999999999999999999999998889999999995432
Q ss_pred hHHHHHHHHHHHHh
Q 035673 147 PDYIRHLCRFIQEM 160 (190)
Q Consensus 147 ~~~~~~i~~~l~~~ 160 (190)
.-+.+.+..|+.+.
T Consensus 374 ~~i~esl~~flnrf 387 (507)
T COG4287 374 QFIKESLEPFLNRF 387 (507)
T ss_pred HHHHHHHHHHHHHH
Confidence 12335555666544
No 162
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.84 E-value=0.00013 Score=47.95 Aligned_cols=68 Identities=18% Similarity=0.014 Sum_probs=43.0
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcC-----ccceeeecCCcchhhhhhhccccccchhhhcchhhhhcCCCceEEEEcCC
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLP-----RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKVKCPVLVIHGTE 110 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~-----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 110 (190)
+..++.++|||+||.+|..++.... ....++.++++..+...... ..........+..++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~------------~~~~~~~~~~~~~i~~~~ 93 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE------------DRLDPSDALFVDRIVNDN 93 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH------------HhhhccCCccEEEEEECC
Confidence 4579999999999999999887653 34566666665432222110 011123345677888888
Q ss_pred Cceee
Q 035673 111 DDVVN 115 (190)
Q Consensus 111 D~~v~ 115 (190)
|.+..
T Consensus 94 D~v~~ 98 (153)
T cd00741 94 DIVPR 98 (153)
T ss_pred CccCC
Confidence 87654
No 163
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.76 E-value=0.00028 Score=50.72 Aligned_cols=51 Identities=22% Similarity=0.355 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhCC--CCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcch
Q 035673 23 EAVYQCLQTEYGV--SQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILS 73 (190)
Q Consensus 23 ~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~ 73 (190)
.+++=++.+.+.+ +.+.-+++|.|+||.+++..+..+| .+..++..||...
T Consensus 160 ~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 160 QELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 3444555555432 3456789999999999999999999 8999999998654
No 164
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.68 E-value=0.00011 Score=55.84 Aligned_cols=52 Identities=8% Similarity=0.188 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-------ccceeeecCCcch
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-------RLRGVVLHSGILS 73 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-------~v~~~v~~~~~~~ 73 (190)
...+...++.+.+. ..++++|+||||||.++..++...+ .|+++|.++++..
T Consensus 103 ~~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 103 FTKLKQLIEEAYKK---NGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHh---cCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 34455555555443 4589999999999999999887763 4899999887654
No 165
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.68 E-value=9.4e-05 Score=50.72 Aligned_cols=41 Identities=29% Similarity=0.477 Sum_probs=35.9
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
-+.|+.++.++..++.+ +.++++|+|||.|+.+...++...
T Consensus 76 ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 46799999999999986 457999999999999999998765
No 166
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.66 E-value=0.0013 Score=51.39 Aligned_cols=64 Identities=16% Similarity=0.204 Sum_probs=48.5
Q ss_pred CCCceEEEEcCCCceeechhHHHHHHHhCC-----------CCceEEecCCCcCCCC---ChhHHHHHHHHHHHHhhc
Q 035673 99 VKCPVLVIHGTEDDVVNWLHGNKLWKMARD-----------PYEPLWIKGGGHCNLE---LYPDYIRHLCRFIQEMEN 162 (190)
Q Consensus 99 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~H~~~~---~~~~~~~~i~~~l~~~~~ 162 (190)
-.-++++.||..|.+|++..+.++++++.. -.++.++||.+|+.-. ...+.+..|.+|+++-..
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCC
Confidence 346899999999999999998888874431 1367778999998432 234688899999986543
No 167
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.65 E-value=0.00024 Score=50.17 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC----------ccceeeecCCcchhhhhhhccccccchhhh
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP----------RLRGVVLHSGILSGLRVLCHVKFTFCCDIY 90 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~----------~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 90 (190)
.+.+.+..+.+.. ..++|+|++||||+.+.+.+..... ++..+++.+|=.+.-... .
T Consensus 78 ~l~~~L~~L~~~~--~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~--~--------- 144 (233)
T PF05990_consen 78 ALARFLRDLARAP--GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFR--S--------- 144 (233)
T ss_pred HHHHHHHHHHhcc--CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHH--H---------
Confidence 4555555555543 3489999999999999988765421 467888888755421100 0
Q ss_pred cchhhhhcCCCceEEEEcCCCceeech
Q 035673 91 KNINKIKKVKCPVLVIHGTEDDVVNWL 117 (190)
Q Consensus 91 ~~~~~~~~~~~P~l~i~g~~D~~v~~~ 117 (190)
....+.....++.+.+..+|......
T Consensus 145 -~~~~~~~~~~~itvy~s~~D~AL~~S 170 (233)
T PF05990_consen 145 -QLPDLGSSARRITVYYSRNDRALKAS 170 (233)
T ss_pred -HHHHHhhcCCCEEEEEcCCchHHHHH
Confidence 01134455578999999999876544
No 168
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.64 E-value=9.6e-05 Score=52.29 Aligned_cols=45 Identities=22% Similarity=0.236 Sum_probs=37.8
Q ss_pred HHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcc
Q 035673 28 CLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGIL 72 (190)
Q Consensus 28 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~ 72 (190)
++.+.+.++.++..|+|||+||.+++.....+| .+...+++||-.
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 334446677788999999999999999999998 899999999843
No 169
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.59 E-value=0.0002 Score=53.12 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCCcchhh
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGILSGL 75 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~~~~~ 75 (190)
.+...++.|.+..+++.++++|+|||+||.+|-.++.... ++..+..+.|....+
T Consensus 133 ~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 133 QLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp HHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred HHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 4566777777777888999999999999999998887654 588888888865533
No 170
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.56 E-value=0.00029 Score=54.76 Aligned_cols=73 Identities=22% Similarity=0.313 Sum_probs=47.6
Q ss_pred CCC-CCCCCCCCCCCC-----CchhhhHHHHHHHHHHHh-CCCCCcEEEEEEccChHHHHHHHhhc----------C-cc
Q 035673 1 YDY-SGYGASTGKPSE-----SNTYADIEAVYQCLQTEY-GVSQEDLILYGQSVGSGPTLHLASKL----------P-RL 62 (190)
Q Consensus 1 ~D~-~G~G~s~~~~~~-----~~~~~d~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~----------~-~v 62 (190)
+|. .|+|.|...... ....+|+.++++.+.+.+ .....+++|+|+|+||..+..+|..- . .+
T Consensus 127 iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inL 206 (462)
T PTZ00472 127 VDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINL 206 (462)
T ss_pred EeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeee
Confidence 365 488887653222 223456666666554443 23457999999999999987777642 1 57
Q ss_pred ceeeecCCcch
Q 035673 63 RGVVLHSGILS 73 (190)
Q Consensus 63 ~~~v~~~~~~~ 73 (190)
+++++.+|+.+
T Consensus 207 kGi~IGNg~~d 217 (462)
T PTZ00472 207 AGLAVGNGLTD 217 (462)
T ss_pred EEEEEeccccC
Confidence 88888887543
No 171
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.53 E-value=0.00021 Score=46.19 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
.+.+.+..+.+.. ...++.+.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~--~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKY--PDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc--cCccchhhccchHHHHHHHHHHh
Confidence 3444444455554 34789999999999999888765
No 172
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.51 E-value=0.00025 Score=49.62 Aligned_cols=49 Identities=16% Similarity=0.146 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-----ccceeeecCCc
Q 035673 23 EAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-----RLRGVVLHSGI 71 (190)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~v~~~v~~~~~ 71 (190)
..+++++.+...-...++.+.|||.||.+|..++..-+ +|..++.+.++
T Consensus 69 ~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 34555665554323356999999999999999887732 68888866653
No 173
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.46 E-value=0.0014 Score=48.70 Aligned_cols=64 Identities=25% Similarity=0.277 Sum_probs=49.4
Q ss_pred CCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceee
Q 035673 1 YDYSGYGASTGKPSESNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVV 66 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v 66 (190)
+-+||+|-|++.....--...++.++.-+.-++|. .+..|-|..+|+.++..+|..+| +|.++=
T Consensus 194 PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~--nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 194 PSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGY--NKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred cCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCc--ceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 45899999997655433344566677777777766 88999999999999999999999 666553
No 174
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.45 E-value=0.00029 Score=54.43 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=48.9
Q ss_pred CCCCCCCCCCCCCC----------CchhhhHHHHHHHHHHHhCC-CCCcEEEEEEccChHHHHHHHhhcC-ccceeeecC
Q 035673 2 DYSGYGASTGKPSE----------SNTYADIEAVYQCLQTEYGV-SQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHS 69 (190)
Q Consensus 2 D~~G~G~s~~~~~~----------~~~~~d~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~ 69 (190)
.+|-+|+|.+.... .....|+...++++++.+.. +..+++++|-|.||.+|..+-.++| .|.+.+..|
T Consensus 66 EHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASS 145 (434)
T PF05577_consen 66 EHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASS 145 (434)
T ss_dssp --TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET
T ss_pred ehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecc
Confidence 57889999753221 22456899999999877632 4459999999999999999999999 788888777
Q ss_pred Ccch
Q 035673 70 GILS 73 (190)
Q Consensus 70 ~~~~ 73 (190)
++..
T Consensus 146 apv~ 149 (434)
T PF05577_consen 146 APVQ 149 (434)
T ss_dssp --CC
T ss_pred ceee
Confidence 6544
No 175
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.43 E-value=0.0016 Score=48.79 Aligned_cols=57 Identities=23% Similarity=0.341 Sum_probs=44.4
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC------ccceeeecCCcchhh
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP------RLRGVVLHSGILSGL 75 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~------~v~~~v~~~~~~~~~ 75 (190)
....++.+..+++.+..| .+.|+++|-|.||.+++.+++.-. -.+++|++||+.+..
T Consensus 176 tQL~qlv~~Y~~Lv~~~G--~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 176 TQLRQLVATYDYLVESEG--NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred hHHHHHHHHHHHHHhccC--CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 345577788888886654 379999999999999998876431 368999999987654
No 176
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.43 E-value=0.0007 Score=48.28 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC----ccceeeecCCcch
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP----RLRGVVLHSGILS 73 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~----~v~~~v~~~~~~~ 73 (190)
+...++.+++.= +..++.++|+|+||.+|..+|.+-. .|..++++.++..
T Consensus 51 a~~yv~~Ir~~Q--P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 51 AAAYVAAIRRVQ--PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhC--CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 555666666543 4469999999999999999997642 6888888887655
No 177
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.34 E-value=0.00056 Score=48.18 Aligned_cols=37 Identities=19% Similarity=0.201 Sum_probs=27.0
Q ss_pred CCCcEEEEEEccChHHHHHHHhhc-----C-ccceeeecCCcc
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKL-----P-RLRGVVLHSGIL 72 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~-----~-~v~~~v~~~~~~ 72 (190)
+..++.+.|||+||.+|..++... + .+..+.+-+|..
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 457899999999999998877652 2 466555565544
No 178
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.28 E-value=0.00047 Score=54.26 Aligned_cols=54 Identities=15% Similarity=0.266 Sum_probs=39.7
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc-----------C-----ccceeeecCCcc
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL-----------P-----RLRGVVLHSGIL 72 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----------~-----~v~~~v~~~~~~ 72 (190)
.++..+...++.+.+.- ..++++|+||||||.+++.++... + .|+++|.++|..
T Consensus 194 ~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 194 QTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 45566777777776654 247999999999999999876531 1 378888888754
No 179
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.24 E-value=0.00038 Score=54.70 Aligned_cols=54 Identities=17% Similarity=0.301 Sum_probs=44.3
Q ss_pred hhhhHHHHHHHHHHH---hCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCCc
Q 035673 18 TYADIEAVYQCLQTE---YGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGI 71 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~ 71 (190)
-..|...+++|+++. +|.|+++|+|+|+|.||..+..++.... .++++|+.|+.
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCC
Confidence 356899999999886 4778999999999999999988877632 58888888763
No 180
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.20 E-value=0.014 Score=44.23 Aligned_cols=53 Identities=23% Similarity=0.158 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHhCCCCC--cEEEEEEccChHHHHHHHhhcC-ccceeeecCCcc
Q 035673 20 ADIEAVYQCLQTEYGVSQE--DLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGIL 72 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~ 72 (190)
.|+..++.++.+.+.-... +++++|+|.||++|...+..-| .+++++=-|++.
T Consensus 164 iD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred HHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 3777777788777653334 9999999999999999999989 788887666543
No 181
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.15 E-value=0.00062 Score=52.23 Aligned_cols=55 Identities=18% Similarity=0.324 Sum_probs=44.6
Q ss_pred hhhhHHHHHHHHHHH---hCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCCcc
Q 035673 18 TYADIEAVYQCLQTE---YGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGIL 72 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~~ 72 (190)
-..|...+++|+++. +|-|++.|.|+|+|.||+.++.+++... -+..+|+.||..
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 356888889999885 6779999999999999999988877632 477778888754
No 182
>PLN02454 triacylglycerol lipase
Probab=97.13 E-value=0.0013 Score=49.90 Aligned_cols=53 Identities=19% Similarity=0.236 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc---------CccceeeecCCcc
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL---------PRLRGVVLHSGIL 72 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~---------~~v~~~v~~~~~~ 72 (190)
+++...++.+.+.+.-..-+|++.|||+||.+|..+|... +.|..+.+-+|-.
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 3455556666665531112499999999999999887542 1355555666644
No 183
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.10 E-value=0.00089 Score=53.01 Aligned_cols=53 Identities=23% Similarity=0.387 Sum_probs=43.6
Q ss_pred hhhhHHHHHHHHHHH---hCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCC
Q 035673 18 TYADIEAVYQCLQTE---YGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSG 70 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~ 70 (190)
-..|...+++|+++. +|-|+++|.|+|+|.||..+..++.... .++++|+.|+
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 356999999999997 5668999999999999999887776532 6899999887
No 184
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.05 E-value=0.0038 Score=46.86 Aligned_cols=128 Identities=19% Similarity=0.220 Sum_probs=69.5
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-----ccceeeecCCcchhhhhhhcccc--ccchh
Q 035673 16 SNTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-----RLRGVVLHSGILSGLRVLCHVKF--TFCCD 88 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~v~~~v~~~~~~~~~~~~~~~~~--~~~~~ 88 (190)
.....|+.+++++...+++. .++.++|+|+|+=+.-....+.| +++.+.+++- .. +.-+.... +...+
T Consensus 306 e~~a~Dl~r~i~~y~~~w~~--~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l-~~--~~~fe~~v~gWlg~~ 380 (456)
T COG3946 306 EQIAADLSRLIRFYARRWGA--KRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGL-GR--TADFEISVEGWLGMA 380 (456)
T ss_pred HHHHHHHHHHHHHHHHhhCc--ceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhc-cc--cceEEEEEeeeeccC
Confidence 34567999999999998855 89999999999988766665554 2333333321 00 00000000 00000
Q ss_pred h---hcchhhhhcCC-CceEEEEcCCC--ceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHH
Q 035673 89 I---YKNINKIKKVK-CPVLVIHGTED--DVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFI 157 (190)
Q Consensus 89 ~---~~~~~~~~~~~-~P~l~i~g~~D--~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l 157 (190)
. .+....+.++. ..+.+|+|.+| ..||.-.. +..+.+.+||+.|| -.+...+.+.|++=+
T Consensus 381 ~~g~~~~~~~~~~l~~~~v~CiYG~~e~d~~Cp~l~~--------~~~~~v~lpGgHHF-d~dy~~la~~il~~~ 446 (456)
T COG3946 381 GEGAGDVVPDIAKLPLARVQCIYGQEEKDTACPSLKA--------KGVDTVKLPGGHHF-DGDYEKLAKAILQGM 446 (456)
T ss_pred CcCCCCcchhhhhCCcceeEEEecCccccccCCcchh--------hcceeEecCCCccc-CccHHHHHHHHHHHH
Confidence 0 12233444553 56788888764 44443221 12356778875554 344445555555544
No 185
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.01 E-value=0.0012 Score=53.39 Aligned_cols=50 Identities=14% Similarity=0.169 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHHhCC----C---CCcEEEEEEccChHHHHHHHhhcC----ccceeeecC
Q 035673 20 ADIEAVYQCLQTEYGV----S---QEDLILYGQSVGSGPTLHLASKLP----RLRGVVLHS 69 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~----~---~~~~~l~G~S~Gg~~a~~~a~~~~----~v~~~v~~~ 69 (190)
+-+.+++.++.+.+.- + ++.++++||||||.+|..++.... .|.-++..+
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 3455666677666532 2 456999999999999987776432 455555544
No 186
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.94 E-value=0.0045 Score=41.65 Aligned_cols=51 Identities=22% Similarity=0.173 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCc
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGI 71 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~ 71 (190)
.++...++-|.... -+..++.++|||+|+.++-..+...+ .+..+++++.+
T Consensus 92 ~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 92 PRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 35666666666554 24569999999999999988887744 78888877643
No 187
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.91 E-value=0.0013 Score=49.37 Aligned_cols=52 Identities=19% Similarity=0.304 Sum_probs=42.1
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceee-ecCC
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVV-LHSG 70 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v-~~~~ 70 (190)
..|....+.++++.++-...+++++|-|.||+++.++=.++| -+.+++ ..+|
T Consensus 148 LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 148 LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 468888999999887766679999999999999999999999 444444 3444
No 188
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.88 E-value=0.0055 Score=45.44 Aligned_cols=52 Identities=21% Similarity=0.379 Sum_probs=41.0
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc--------C-ccceeeecCCcc
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL--------P-RLRGVVLHSGIL 72 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------~-~v~~~v~~~~~~ 72 (190)
..+++.++.+|.+.... ++|+|++||||..++++.+.+- + +++-+|+.+|=.
T Consensus 174 r~aLe~~lr~La~~~~~--~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 174 RPALERLLRYLATDKPV--KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred HHHHHHHHHHHHhCCCC--ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 34788889999888744 8999999999999998877542 2 578888888743
No 189
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.79 E-value=0.005 Score=43.01 Aligned_cols=37 Identities=14% Similarity=0.134 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
..+.+.++.+++.-+ . ++-||||||||.++-.++...
T Consensus 60 ~~l~~fI~~Vl~~TG--a-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 60 KQLRAFIDAVLAYTG--A-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHHHT-----EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhC--C-EEEEEEcCCcCHHHHHHHHHc
Confidence 357777777777763 4 999999999999998887643
No 190
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.78 E-value=0.0073 Score=41.84 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=25.8
Q ss_pred CCcEEEEEEccChHHHHHHHhhcCccceeeecCC
Q 035673 37 QEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSG 70 (190)
Q Consensus 37 ~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~ 70 (190)
.+.+.|+++|||-.+|..+....+ ++..+.+++
T Consensus 56 y~~i~lvAWSmGVw~A~~~l~~~~-~~~aiAING 88 (213)
T PF04301_consen 56 YREIYLVAWSMGVWAANRVLQGIP-FKRAIAING 88 (213)
T ss_pred CceEEEEEEeHHHHHHHHHhccCC-cceeEEEEC
Confidence 378999999999999988876554 566666664
No 191
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.76 E-value=0.0031 Score=48.23 Aligned_cols=41 Identities=12% Similarity=0.165 Sum_probs=31.0
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
....+...++...+..| .++++|++|||||.+.+.+...++
T Consensus 164 yl~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~lyFl~w~~ 204 (473)
T KOG2369|consen 164 YLSKLKKKIETMYKLNG--GKKVVLISHSMGGLYVLYFLKWVE 204 (473)
T ss_pred HHHHHHHHHHHHHHHcC--CCceEEEecCCccHHHHHHHhccc
Confidence 34456666666666653 389999999999999999887765
No 192
>PLN02408 phospholipase A1
Probab=96.63 E-value=0.0035 Score=46.92 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
+.+.+..+.+.+.-...+|++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 4444455555543222369999999999999887764
No 193
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.59 E-value=0.0074 Score=40.04 Aligned_cols=50 Identities=20% Similarity=0.217 Sum_probs=38.7
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcchhh
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGILSGL 75 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~~~~ 75 (190)
+.-.++.++. =+....+-|.||||..|+.+..++| .+.++|.+|+..+..
T Consensus 89 AyerYv~eEa--lpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdar 139 (227)
T COG4947 89 AYERYVIEEA--LPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHhh--cCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHH
Confidence 3444555543 1245788999999999999999999 789999999987644
No 194
>PLN02571 triacylglycerol lipase
Probab=96.55 E-value=0.0043 Score=47.15 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
++.+.+..+.+.+.-..-++++.|||+||.+|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44444445555442111269999999999999988764
No 195
>PLN00413 triacylglycerol lipase
Probab=96.50 E-value=0.0047 Score=47.55 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHh
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
.+...++.+.+.+ +..++++.|||+||.+|..++.
T Consensus 269 ~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 3444445554444 4468999999999999998874
No 196
>PLN02934 triacylglycerol lipase
Probab=96.44 E-value=0.0054 Score=47.64 Aligned_cols=35 Identities=14% Similarity=0.351 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHh
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
.+...++.+.+.+ +..++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHH
Confidence 3555555555554 4468999999999999998874
No 197
>PLN02162 triacylglycerol lipase
Probab=96.42 E-value=0.0055 Score=47.13 Aligned_cols=22 Identities=23% Similarity=0.342 Sum_probs=18.7
Q ss_pred CCCcEEEEEEccChHHHHHHHh
Q 035673 36 SQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
+..++++.|||+||.+|..++.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 4468999999999999988754
No 198
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.42 E-value=0.012 Score=39.94 Aligned_cols=77 Identities=19% Similarity=0.156 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh--cC-----ccceeeecCCcchhhhhhhccccccchhhhcchh
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK--LP-----RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNIN 94 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~~-----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
+...++.....- +..+++|+|+|.|+.++..++.. .+ +|.++++++-+....... .
T Consensus 67 ~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~---------------~ 129 (179)
T PF01083_consen 67 LVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQP---------------G 129 (179)
T ss_dssp HHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTT---------------T
T ss_pred HHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCcc---------------c
Confidence 333444333343 55799999999999999998877 22 688888876443211000 0
Q ss_pred hhhcCCCceEEEEcCCCceee
Q 035673 95 KIKKVKCPVLVIHGTEDDVVN 115 (190)
Q Consensus 95 ~~~~~~~P~l~i~g~~D~~v~ 115 (190)
......-.++-+--..|.++.
T Consensus 130 ~~~~~~~~~~~~C~~gD~vC~ 150 (179)
T PF01083_consen 130 IPGDYSDRVRSYCNPGDPVCD 150 (179)
T ss_dssp BTCSCGGGEEEE-BTT-GGGG
T ss_pred cCcccccceeEEcCCCCcccC
Confidence 111122346677777888885
No 199
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=96.39 E-value=0.0094 Score=42.85 Aligned_cols=50 Identities=20% Similarity=0.289 Sum_probs=37.0
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCC
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSG 70 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~ 70 (190)
++.+..+++..+++.+ +..++.+-|||+||.+|..+..++. +-.+.+-+|
T Consensus 258 yySa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T KOG4540|consen 258 YYSAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred hhHHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 3445566666777776 5679999999999999998887775 445555555
No 200
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=96.39 E-value=0.0094 Score=42.85 Aligned_cols=50 Identities=20% Similarity=0.289 Sum_probs=37.0
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCC
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSG 70 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~ 70 (190)
++.+..+++..+++.+ +..++.+-|||+||.+|..+..++. +-.+.+-+|
T Consensus 258 yySa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T COG5153 258 YYSAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred hhHHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 3445566666777776 5679999999999999998887775 445555555
No 201
>PLN02324 triacylglycerol lipase
Probab=96.33 E-value=0.0077 Score=45.78 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
.+.+.+..+.+.+.-..-.|.+.|||+||.+|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455555555553112379999999999999988753
No 202
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.27 E-value=0.017 Score=43.20 Aligned_cols=52 Identities=17% Similarity=0.155 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhCC-CCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCCcch
Q 035673 22 IEAVYQCLQTEYGV-SQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGILS 73 (190)
Q Consensus 22 ~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~~~ 73 (190)
...+..++.+.+.. ..+++.++||||||..+..++...+ +|+.++.++++-.
T Consensus 110 ~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 110 GEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 33444444443321 3489999999999999998888876 7999998887543
No 203
>PLN02802 triacylglycerol lipase
Probab=96.23 E-value=0.0077 Score=46.81 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
+.+.+..+.+.+.-..-+|+|.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 3344444444442112379999999999999887764
No 204
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.19 E-value=0.0079 Score=42.05 Aligned_cols=36 Identities=11% Similarity=0.029 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhC---CCCCcEEEEEEccChHHHHHHHh
Q 035673 22 IEAVYQCLQTEYG---VSQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 22 ~~~~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
..++++++.+... ....++.++||||||.++-.++.
T Consensus 59 g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 59 GERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 3344555555432 12258999999999999865554
No 205
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=95.96 E-value=0.0078 Score=34.84 Aligned_cols=15 Identities=47% Similarity=0.718 Sum_probs=11.9
Q ss_pred CCCCCCCCCCCCCCC
Q 035673 1 YDYSGYGASTGKPSE 15 (190)
Q Consensus 1 ~D~~G~G~s~~~~~~ 15 (190)
+|+||||.|++....
T Consensus 49 ~D~rGhG~S~g~rg~ 63 (79)
T PF12146_consen 49 YDHRGHGRSEGKRGH 63 (79)
T ss_pred ECCCcCCCCCCcccc
Confidence 599999999965444
No 206
>PLN02310 triacylglycerol lipase
Probab=95.89 E-value=0.014 Score=44.36 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHhC--CCCCcEEEEEEccChHHHHHHHhh
Q 035673 21 DIEAVYQCLQTEYG--VSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 21 d~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
.+.+.+..+.+.+. -..-+|.|.|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34444444544442 122479999999999999887753
No 207
>PLN02761 lipase class 3 family protein
Probab=95.87 E-value=0.014 Score=45.51 Aligned_cols=38 Identities=24% Similarity=0.271 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHhC----CCCCcEEEEEEccChHHHHHHHh
Q 035673 20 ADIEAVYQCLQTEYG----VSQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
+++...+..+.+.+. -..-+|.+.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345555555555552 12247999999999999998774
No 208
>PLN02753 triacylglycerol lipase
Probab=95.85 E-value=0.015 Score=45.47 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHHHhCC---CCCcEEEEEEccChHHHHHHHh
Q 035673 20 ADIEAVYQCLQTEYGV---SQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
+.+.+.+..+.+.+.- ..-+|.+.|||+||.+|...|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3444455555555431 1358999999999999998875
No 209
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.47 E-value=0.016 Score=46.31 Aligned_cols=52 Identities=17% Similarity=0.293 Sum_probs=39.6
Q ss_pred hhhHHHHHHHHHHH---hCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCC
Q 035673 19 YADIEAVYQCLQTE---YGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSG 70 (190)
Q Consensus 19 ~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~ 70 (190)
..|...+++|+++. +|-|+++|.++|||.||..+..+..... .+..+|.+++
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 34888899999887 4668899999999999998877665432 4556665554
No 210
>PLN02847 triacylglycerol lipase
Probab=95.43 E-value=0.028 Score=44.69 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=19.1
Q ss_pred CCCcEEEEEEccChHHHHHHHhh
Q 035673 36 SQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
+.-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 33589999999999999887654
No 211
>PLN02719 triacylglycerol lipase
Probab=95.40 E-value=0.027 Score=43.94 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHhCC---CCCcEEEEEEccChHHHHHHHh
Q 035673 21 DIEAVYQCLQTEYGV---SQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 21 d~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
++.+.+..+.+.+.- ...+|.+.|||+||.+|...|.
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 444445555555421 1248999999999999998775
No 212
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.34 E-value=0.028 Score=43.98 Aligned_cols=21 Identities=29% Similarity=0.339 Sum_probs=18.1
Q ss_pred CcEEEEEEccChHHHHHHHhh
Q 035673 38 EDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
.+|.|.|||+||.+|...|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999887743
No 213
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.23 E-value=0.03 Score=41.93 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
..+.+.++.+.+.+ +.-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~--~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELY--PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhc--CCcEEEEecCChHHHHHHHHHHH
Confidence 46777777777777 45799999999999999887754
No 214
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.06 E-value=0.7 Score=32.90 Aligned_cols=136 Identities=16% Similarity=0.158 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHhCCCC--CcEEEEEEccChHHHHHHHhhcC-ccceeeecCC----cchhhhhhhcc----ccccchhhh
Q 035673 22 IEAVYQCLQTEYGVSQ--EDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSG----ILSGLRVLCHV----KFTFCCDIY 90 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~----~~~~~~~~~~~----~~~~~~~~~ 90 (190)
...+++.+.+..+... -+++-+|||+|+-+-+.+....+ .-++-++++= ..+.+...... ...+.....
T Consensus 72 f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~ 151 (250)
T PF07082_consen 72 FERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPSPE 151 (250)
T ss_pred HHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHhhhccccccCccCCHH
Confidence 3444555555433332 37788999999999888877665 4455566551 11111111111 111111111
Q ss_pred cchhhhh--cCCCceEEEEcCCCceeechhHHHHHHHhCC----CCceEEecCCCcCCCC-------ChhH--HHHHHHH
Q 035673 91 KNINKIK--KVKCPVLVIHGTEDDVVNWLHGNKLWKMARD----PYEPLWIKGGGHCNLE-------LYPD--YIRHLCR 155 (190)
Q Consensus 91 ~~~~~~~--~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~-------~~~~--~~~~i~~ 155 (190)
.....++ ..-..+++|.-.+|.+ +++..+.+.+.. .......+ +.|.... ...+ -.+.+.+
T Consensus 152 ET~~li~~~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~-G~HLTPl~q~~~~~~g~~ftP~da~~q 227 (250)
T PF07082_consen 152 ETRRLIRESYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLP-GNHLTPLGQDLKWQVGSSFTPLDAVGQ 227 (250)
T ss_pred HHHHHHHHhcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCC-CCCCCcCcCCcCCccCCccCchHHHHH
Confidence 1111111 1224578888888875 344555544432 22334455 5785311 1122 2377788
Q ss_pred HHHHhh
Q 035673 156 FIQEME 161 (190)
Q Consensus 156 ~l~~~~ 161 (190)
|+++..
T Consensus 228 ~~k~~~ 233 (250)
T PF07082_consen 228 WLKQEV 233 (250)
T ss_pred HHHHHH
Confidence 877654
No 215
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.98 E-value=0.078 Score=41.19 Aligned_cols=69 Identities=20% Similarity=0.303 Sum_probs=51.8
Q ss_pred CCCCCCCCCCCCCC----------CchhhhHHHHHHHHHHHhCCCCC-cEEEEEEccChHHHHHHHhhcC-ccceeeecC
Q 035673 2 DYSGYGASTGKPSE----------SNTYADIEAVYQCLQTEYGVSQE-DLILYGQSVGSGPTLHLASKLP-RLRGVVLHS 69 (190)
Q Consensus 2 D~~G~G~s~~~~~~----------~~~~~d~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~ 69 (190)
++|-+|.|.+.... .....|+...++.+..+++.... +.+.+|-|.-|.+++++=..+| .+.+.|..|
T Consensus 125 EHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASS 204 (514)
T KOG2182|consen 125 EHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASS 204 (514)
T ss_pred eeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccc
Confidence 56888977543222 12346888888888888876544 9999999999999999999999 566666655
Q ss_pred C
Q 035673 70 G 70 (190)
Q Consensus 70 ~ 70 (190)
+
T Consensus 205 a 205 (514)
T KOG2182|consen 205 A 205 (514)
T ss_pred c
Confidence 4
No 216
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=94.94 E-value=0.97 Score=35.43 Aligned_cols=53 Identities=25% Similarity=0.317 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcch
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILS 73 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~ 73 (190)
+.+.++++.-.+.+|.+.+.+++.|-|||..-|+.+++... ..++|+-=|+.+
T Consensus 339 ~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~-P~AIiVgKPL~N 391 (511)
T TIGR03712 339 QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS-PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC-CceEEEcCcccc
Confidence 35777777777888999999999999999999999998764 578888778765
No 217
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.56 E-value=0.086 Score=40.51 Aligned_cols=59 Identities=20% Similarity=0.315 Sum_probs=39.5
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCCC-------------------------CceEEecCCCcCCCCChhH-HHHHH
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARDP-------------------------YEPLWIKGGGHCNLELYPD-YIRHL 153 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~H~~~~~~~~-~~~~i 153 (190)
..++|+.+|..|.+++.-.++.+.+.+.-. ..++.+.++||....+.|+ ..+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 489999999999999999888888765411 1345678999986655554 56888
Q ss_pred HHHHH
Q 035673 154 CRFIQ 158 (190)
Q Consensus 154 ~~~l~ 158 (190)
.+||+
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88874
No 218
>PF03283 PAE: Pectinacetylesterase
Probab=94.33 E-value=0.059 Score=40.75 Aligned_cols=38 Identities=24% Similarity=0.289 Sum_probs=30.6
Q ss_pred hhhHHHHHHHHHHH-hCCCCCcEEEEEEccChHHHHHHHh
Q 035673 19 YADIEAVYQCLQTE-YGVSQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 19 ~~d~~~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
...+.++++++.+. +. +.++++|.|.|.||.-++..+.
T Consensus 137 ~~i~~avl~~l~~~gl~-~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLP-NAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHHhcCc-ccceEEEeccChHHHHHHHHHH
Confidence 35688899999888 43 4689999999999988877553
No 219
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.10 E-value=0.14 Score=34.92 Aligned_cols=60 Identities=17% Similarity=0.214 Sum_probs=44.2
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCCC----CceEEecCCCcCCCCCh----hHHHHHHHHHHHH
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARDP----YEPLWIKGGGHCNLELY----PDYIRHLCRFIQE 159 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~----~~~~~~~~~~H~~~~~~----~~~~~~i~~~l~~ 159 (190)
+++++-|-|+.|.++.+-++....+.+.+- +..++.+++||..+..- .++...|.+||.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 478888999999999998888777765532 45667889999855443 3566777777764
No 220
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=93.94 E-value=0.13 Score=37.26 Aligned_cols=34 Identities=12% Similarity=0.054 Sum_probs=26.2
Q ss_pred CcEEEEEEccChHHHHHHHhhcC--ccceeeecCCc
Q 035673 38 EDLILYGQSVGSGPTLHLASKLP--RLRGVVLHSGI 71 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~~~~--~v~~~v~~~~~ 71 (190)
+=+.++|+|.||.++-.++.+.+ .|+-+|.+++.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 46999999999999999998875 79999988763
No 221
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.91 E-value=0.18 Score=37.87 Aligned_cols=66 Identities=17% Similarity=0.162 Sum_probs=43.0
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcC------ccceeeecCCcchhh-hhhhccccccchhhhcchhhhhcCCCceEEEEc
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLP------RLRGVVLHSGILSGL-RVLCHVKFTFCCDIYKNINKIKKVKCPVLVIHG 108 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~------~v~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 108 (190)
..+++.++|||+|+.+...++..-. .|+.+++++.+...- ..+ . ....-+.-.+.=+++
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W------------~--~~r~vVsGr~vN~YS 283 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEW------------R--KIRSVVSGRLVNVYS 283 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHH------------H--HHHHHccCeEEEEec
Confidence 4468999999999999877665432 478888887654321 111 0 111235667888888
Q ss_pred CCCceee
Q 035673 109 TEDDVVN 115 (190)
Q Consensus 109 ~~D~~v~ 115 (190)
++|.+..
T Consensus 284 ~~D~vL~ 290 (345)
T PF05277_consen 284 ENDWVLG 290 (345)
T ss_pred CcHHHHH
Confidence 8887653
No 222
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.90 E-value=0.27 Score=36.64 Aligned_cols=60 Identities=20% Similarity=0.160 Sum_probs=42.7
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCC-----------------------C-CceEEecCCCcCCCCChhHHHHHHHH
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARD-----------------------P-YEPLWIKGGGHCNLELYPDYIRHLCR 155 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~-----------------------~-~~~~~~~~~~H~~~~~~~~~~~~i~~ 155 (190)
..++|+..|..|.+|+.-..+.+.+.++- . ..+..+.++||.....+....+.+..
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 37899999999999999888888876651 0 13344568999775433346678888
Q ss_pred HHHH
Q 035673 156 FIQE 159 (190)
Q Consensus 156 ~l~~ 159 (190)
||..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 8753
No 223
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.76 E-value=0.31 Score=36.33 Aligned_cols=72 Identities=19% Similarity=0.175 Sum_probs=42.9
Q ss_pred CCCC-CCCCCCCCCCC--C---chhhhHHHHHHHHHH-HhCCCCCcEEEEEEccChHHHHHHHhh----c------C-cc
Q 035673 1 YDYS-GYGASTGKPSE--S---NTYADIEAVYQCLQT-EYGVSQEDLILYGQSVGSGPTLHLASK----L------P-RL 62 (190)
Q Consensus 1 ~D~~-G~G~s~~~~~~--~---~~~~d~~~~~~~~~~-~~~~~~~~~~l~G~S~Gg~~a~~~a~~----~------~-~v 62 (190)
+|.| |-|.|-..... . ...+|+..++..+.+ .......+++|.|-|.||..+-.+|.. . + .+
T Consensus 7 iDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inL 86 (319)
T PLN02213 7 LDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINL 86 (319)
T ss_pred ecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceee
Confidence 3666 77877543221 1 112343333333322 333456799999999999987666643 1 2 57
Q ss_pred ceeeecCCcc
Q 035673 63 RGVVLHSGIL 72 (190)
Q Consensus 63 ~~~v~~~~~~ 72 (190)
+++++-+|+.
T Consensus 87 kGi~IGNg~t 96 (319)
T PLN02213 87 QGYMLGNPVT 96 (319)
T ss_pred eEEEeCCCCC
Confidence 8888888754
No 224
>PLN02633 palmitoyl protein thioesterase family protein
Probab=93.30 E-value=0.45 Score=35.03 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=28.6
Q ss_pred CcEEEEEEccChHHHHHHHhhcC---ccceeeecCCc
Q 035673 38 EDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGI 71 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~ 71 (190)
+-+.++|+|.||.++-.++.+-+ .|+.+|.+++.
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 35999999999999999988764 58999988763
No 225
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=92.54 E-value=1.2 Score=32.14 Aligned_cols=50 Identities=10% Similarity=0.102 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC--ccceeeecCCc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP--RLRGVVLHSGI 71 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~v~~~v~~~~~ 71 (190)
.+..+.+.+.+-... ++=+.++|.|.||.++-.++..-+ .++.+|.+++.
T Consensus 76 Qv~~~ce~v~~m~~l-sqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 76 QVDVACEKVKQMPEL-SQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred HHHHHHHHHhcchhc-cCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 344444444432222 356899999999999988887644 78888877753
No 226
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=91.86 E-value=4 Score=30.11 Aligned_cols=64 Identities=11% Similarity=0.216 Sum_probs=44.1
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhC---CC-CceEEecCCCcCCCCC----hhHHHHHHHHHHHHhhcc
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMAR---DP-YEPLWIKGGGHCNLEL----YPDYIRHLCRFIQEMENM 163 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~---~~-~~~~~~~~~~H~~~~~----~~~~~~~i~~~l~~~~~~ 163 (190)
++-++-+-|++|.+.-.-+++...+.+. .. ....+-++.||..... .+++...|.+|+.++-+.
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 3677888999999887766666555443 22 3456678999974332 245678899999887543
No 227
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.73 E-value=0.54 Score=32.71 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=27.4
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcC---ccceeeecC
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHS 69 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~ 69 (190)
..+.+.++.||.||...+.+..++| +|.++.+-.
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTD 224 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTD 224 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeec
Confidence 5688999999999999999999998 455554433
No 228
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=91.49 E-value=0.66 Score=36.52 Aligned_cols=61 Identities=16% Similarity=0.241 Sum_probs=44.4
Q ss_pred CCCceEEEEcCCCceeechhHHHHHHHhCC----------------------------------CCceEEecCCCcCCCC
Q 035673 99 VKCPVLVIHGTEDDVVNWLHGNKLWKMARD----------------------------------PYEPLWIKGGGHCNLE 144 (190)
Q Consensus 99 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~H~~~~ 144 (190)
-..++++..|+.|.+|+....+++.+.++- ...++.+.++||+...
T Consensus 363 ~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~ 442 (462)
T PTZ00472 363 DGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPM 442 (462)
T ss_pred cCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChh
Confidence 358999999999999999888877765540 0123345789998776
Q ss_pred ChhH-HHHHHHHHHHH
Q 035673 145 LYPD-YIRHLCRFIQE 159 (190)
Q Consensus 145 ~~~~-~~~~i~~~l~~ 159 (190)
+.|+ ..+.+..|+..
T Consensus 443 d~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 443 DQPAVALTMINRFLRN 458 (462)
T ss_pred hHHHHHHHHHHHHHcC
Confidence 6665 66888888753
No 229
>PLN02606 palmitoyl-protein thioesterase
Probab=91.27 E-value=0.79 Score=33.73 Aligned_cols=34 Identities=18% Similarity=0.035 Sum_probs=28.5
Q ss_pred CcEEEEEEccChHHHHHHHhhcC---ccceeeecCCc
Q 035673 38 EDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSGI 71 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~~ 71 (190)
+-+.++|+|.||.++-.++.+-| .|+.+|.+++.
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 45999999999999999998864 58899988753
No 230
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=90.91 E-value=0.58 Score=33.01 Aligned_cols=38 Identities=11% Similarity=0.285 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
-+..+.+.+..... ..++++|+|+|+|+.++...+.+.
T Consensus 32 G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 32 GVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred HHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHH
Confidence 34445555554433 558999999999999998876553
No 231
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=90.84 E-value=1.1 Score=34.89 Aligned_cols=60 Identities=20% Similarity=0.167 Sum_probs=44.5
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCCC------------------------CceEEecCCCcCCCCChhHHHHHHHH
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARDP------------------------YEPLWIKGGGHCNLELYPDYIRHLCR 155 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~------------------------~~~~~~~~~~H~~~~~~~~~~~~i~~ 155 (190)
..++|+..|+.|.+|+...++.+.+.++-. ..+..+.++||.....+....+.+..
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~~al~m~~~ 426 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 426 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHHHHHHHHHH
Confidence 479999999999999999988888765410 13345678999875444446688888
Q ss_pred HHHH
Q 035673 156 FIQE 159 (190)
Q Consensus 156 ~l~~ 159 (190)
|+..
T Consensus 427 Fi~~ 430 (433)
T PLN03016 427 WISG 430 (433)
T ss_pred HHcC
Confidence 8853
No 232
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=90.36 E-value=0.12 Score=39.35 Aligned_cols=65 Identities=20% Similarity=0.264 Sum_probs=51.0
Q ss_pred CCCCCCCCCCCCCCC------chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC-ccceeeecC
Q 035673 2 DYSGYGASTGKPSES------NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHS 69 (190)
Q Consensus 2 D~~G~G~s~~~~~~~------~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~ 69 (190)
.+|-||.|.+.+.+. ....|..++++.++..+. .+.+--|.|-||+.++..=..+| +|++.|...
T Consensus 95 EhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~---~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 95 EHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP---GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred EEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc---CCceecCcCCCceeEEEEeeeCCCCCCeeeeee
Confidence 467788888766542 234689999999988773 67999999999999998888888 898888543
No 233
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=90.29 E-value=0.68 Score=33.78 Aligned_cols=41 Identities=24% Similarity=0.399 Sum_probs=33.2
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
....+..+..++.+.+. +.++|.++|+|-|+.+|-.++..-
T Consensus 73 ~~~~I~~ay~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYE-PGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred hHHHHHHHHHHHHhccC-CcceEEEEecCccHHHHHHHHHHH
Confidence 44568888888888875 567899999999999998888653
No 234
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.27 E-value=0.83 Score=36.67 Aligned_cols=47 Identities=26% Similarity=0.388 Sum_probs=29.5
Q ss_pred HHHHHHHHHhCC-CCCcEEEEEEccChHHHHHHHhh-----cC-------ccceeeecCCc
Q 035673 24 AVYQCLQTEYGV-SQEDLILYGQSVGSGPTLHLASK-----LP-------RLRGVVLHSGI 71 (190)
Q Consensus 24 ~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~-----~~-------~v~~~v~~~~~ 71 (190)
+.++.+... ++ +.++++.+||||||.++=.++.. .| ...++++++.+
T Consensus 512 ~lleql~~~-~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 512 ELLEQLQAA-GVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHh-ccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 344444333 33 36899999999999887655432 22 24577766643
No 235
>PLN02209 serine carboxypeptidase
Probab=90.25 E-value=1.4 Score=34.54 Aligned_cols=59 Identities=20% Similarity=0.188 Sum_probs=43.9
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCC-----------------------C-CceEEecCCCcCCCCChhHHHHHHHH
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARD-----------------------P-YEPLWIKGGGHCNLELYPDYIRHLCR 155 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~-----------------------~-~~~~~~~~~~H~~~~~~~~~~~~i~~ 155 (190)
..++++..|+.|.+|+...++.+.+.++- . ..+..+.++||.....+++..+.+.+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~qP~~al~m~~~ 430 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEYLPEESSIMFQR 430 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCcCHHHHHHHHHH
Confidence 46899999999999999988888876651 0 13445678999875433446688888
Q ss_pred HHH
Q 035673 156 FIQ 158 (190)
Q Consensus 156 ~l~ 158 (190)
|+.
T Consensus 431 fi~ 433 (437)
T PLN02209 431 WIS 433 (437)
T ss_pred HHc
Confidence 875
No 236
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=89.47 E-value=1 Score=33.44 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=33.9
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
....+..+..++.+.+. +.++|.++|+|-|++.|--+|..
T Consensus 103 L~~nI~~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 103 LVQNIREAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHH
Confidence 34578889999999987 56899999999999998887765
No 237
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=88.67 E-value=1.3 Score=34.53 Aligned_cols=39 Identities=21% Similarity=0.199 Sum_probs=29.4
Q ss_pred CCCcEEEEEEccChHHHHHHHhh----c------C-ccceeeecCCcchh
Q 035673 36 SQEDLILYGQSVGSGPTLHLASK----L------P-RLRGVVLHSGILSG 74 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~----~------~-~v~~~v~~~~~~~~ 74 (190)
...+++|+|.|.||..+-.+|.. . + .++++++-+|+.+.
T Consensus 163 ~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 163 FSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred cCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCc
Confidence 45789999999999877666542 1 2 68899999987653
No 238
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.78 E-value=7 Score=29.63 Aligned_cols=63 Identities=16% Similarity=0.239 Sum_probs=44.9
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCCC---CceEEecCCCcCCC--CChhHHHHHHHHHHHHhhc
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARDP---YEPLWIKGGGHCNL--ELYPDYIRHLCRFIQEMEN 162 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~--~~~~~~~~~i~~~l~~~~~ 162 (190)
..+.+.+++..|.++|.+..+++.+..... .+-+-+.++.|... ..+..+++...+|++....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 578899999999999999998886544432 22333567778632 2334688999999987764
No 239
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=86.19 E-value=2.8 Score=32.95 Aligned_cols=60 Identities=23% Similarity=0.251 Sum_probs=44.6
Q ss_pred CceEEEEcCCCceeechhHHHHHHHhCCC------------------------CceEEecCCCcCCCCChhH-HHHHHHH
Q 035673 101 CPVLVIHGTEDDVVNWLHGNKLWKMARDP------------------------YEPLWIKGGGHCNLELYPD-YIRHLCR 155 (190)
Q Consensus 101 ~P~l~i~g~~D~~v~~~~~~~~~~~~~~~------------------------~~~~~~~~~~H~~~~~~~~-~~~~i~~ 155 (190)
.+++|..|+.|-+||.-..+.+.+.+.-. ..+..+.|+||......|+ ....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 79999999999999999888876654310 0224567999987666665 5588888
Q ss_pred HHHHh
Q 035673 156 FIQEM 160 (190)
Q Consensus 156 ~l~~~ 160 (190)
||...
T Consensus 444 fl~g~ 448 (454)
T KOG1282|consen 444 FLNGQ 448 (454)
T ss_pred HHcCC
Confidence 98653
No 240
>PLN02209 serine carboxypeptidase
Probab=86.14 E-value=2.9 Score=32.77 Aligned_cols=39 Identities=23% Similarity=0.214 Sum_probs=29.5
Q ss_pred CCCcEEEEEEccChHHHHHHHhh----c------C-ccceeeecCCcchh
Q 035673 36 SQEDLILYGQSVGSGPTLHLASK----L------P-RLRGVVLHSGILSG 74 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~----~------~-~v~~~v~~~~~~~~ 74 (190)
...+++|.|.|.||..+-.+|.. . + .++++++.+|+.+.
T Consensus 165 ~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 165 LSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred cCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 44689999999999876666542 1 2 57899999997764
No 241
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=86.02 E-value=0.72 Score=35.48 Aligned_cols=72 Identities=28% Similarity=0.365 Sum_probs=42.1
Q ss_pred CC-CCCCCCCCCCCCC---chhhhHHHHHHHHHH---H-hCCCCCcEEEEEEccChHHHHHHHhh----c------C-cc
Q 035673 2 DY-SGYGASTGKPSES---NTYADIEAVYQCLQT---E-YGVSQEDLILYGQSVGSGPTLHLASK----L------P-RL 62 (190)
Q Consensus 2 D~-~G~G~s~~~~~~~---~~~~d~~~~~~~~~~---~-~~~~~~~~~l~G~S~Gg~~a~~~a~~----~------~-~v 62 (190)
|. .|-|.|....... +..++..+..++|.+ . ......+++|.|-|+||..+-.+|.. . + .+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 53 3778776544332 223333334433333 2 23445699999999999987666643 2 2 58
Q ss_pred ceeeecCCcch
Q 035673 63 RGVVLHSGILS 73 (190)
Q Consensus 63 ~~~v~~~~~~~ 73 (190)
+++++.+|+.+
T Consensus 172 kGi~IGng~~d 182 (415)
T PF00450_consen 172 KGIAIGNGWID 182 (415)
T ss_dssp EEEEEESE-SB
T ss_pred ccceecCcccc
Confidence 89999998654
No 242
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=84.75 E-value=3.4 Score=36.60 Aligned_cols=66 Identities=18% Similarity=0.260 Sum_probs=41.1
Q ss_pred CCCCCCCCCCCCCCchhhhHHH-HHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC---ccceeeecCC
Q 035673 3 YSGYGASTGKPSESNTYADIEA-VYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP---RLRGVVLHSG 70 (190)
Q Consensus 3 ~~G~G~s~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~v~~~v~~~~ 70 (190)
.|-||.-.....+.+..+++.+ .++.+++.- +..+..++|.|+|+.++..+|.... ....+|++.+
T Consensus 2148 ~PaYglQ~T~~vP~dSies~A~~yirqirkvQ--P~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2148 IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ--PEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred CcchhhhccccCCcchHHHHHHHHHHHHHhcC--CCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 4555543333333445555433 444444432 4469999999999999999986543 3456777765
No 243
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=83.45 E-value=1.2 Score=29.59 Aligned_cols=48 Identities=21% Similarity=0.334 Sum_probs=27.6
Q ss_pred CCCCCCCCCCCC--CCchhhhHHHHH----HHHHHHhCC--CCCcEEEEEEccChH
Q 035673 3 YSGYGASTGKPS--ESNTYADIEAVY----QCLQTEYGV--SQEDLILYGQSVGSG 50 (190)
Q Consensus 3 ~~G~G~s~~~~~--~~~~~~d~~~~~----~~~~~~~~~--~~~~~~l~G~S~Gg~ 50 (190)
+-|||....... .....+.+...+ +.+.+.++. .+++|.++|.|++..
T Consensus 61 lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 61 LVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 348887722221 123345666666 777777643 578999999999987
No 244
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=81.44 E-value=1.3 Score=35.66 Aligned_cols=43 Identities=14% Similarity=0.258 Sum_probs=32.5
Q ss_pred CCceEEEEcCCCceeechhHHHHHHHhCC-------CCceEEecCCCcCC
Q 035673 100 KCPVLVIHGTEDDVVNWLHGNKLWKMARD-------PYEPLWIKGGGHCN 142 (190)
Q Consensus 100 ~~P~l~i~g~~D~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~H~~ 142 (190)
..|.+++||..|.++|..+..+-+-.+.. ...++++.++.|+.
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 58999999999999999877766543332 13566778989974
No 245
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=81.36 E-value=2.5 Score=28.32 Aligned_cols=34 Identities=29% Similarity=0.205 Sum_probs=26.0
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++ ++ ..-.+.|.|+|+.++..++...+
T Consensus 15 Gvl~aL~e~-gi--~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRER-GP--LIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCC
Confidence 355666555 33 46789999999999999998765
No 246
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=79.81 E-value=2.7 Score=28.63 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=25.3
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++ ++ ..-.++|.|.||.++..++....
T Consensus 16 Gvl~~L~e~-~~--~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 16 GALKALEEA-GI--LKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHc-CC--CcceEEEECHHHHHHHHHHcCCC
Confidence 456666554 33 44789999999999999987654
No 247
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=79.48 E-value=4.8 Score=23.06 Aligned_cols=44 Identities=14% Similarity=0.303 Sum_probs=31.5
Q ss_pred chhhhHHHHHHHHHHHhCC-CCCcEEEEEEccChHHHHHHHhhcC
Q 035673 17 NTYADIEAVYQCLQTEYGV-SQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
.....+.+.+++++.+..+ .++++.|+|-|-|=.+|.+.++.+.
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 4566888899999886433 3479999999999999988776653
No 248
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=79.27 E-value=2.9 Score=31.03 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=25.2
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
-+++.+.++ ++ ..-.|+|.|+|+.++..++...
T Consensus 32 GvL~aLee~-gi--~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEA-GI--PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCC
Confidence 356666555 44 4578999999999999999764
No 249
>PRK10279 hypothetical protein; Provisional
Probab=79.24 E-value=2.6 Score=31.23 Aligned_cols=33 Identities=30% Similarity=0.274 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
-+++.+.++ ++ ..-.|+|.|+|+.++..+|...
T Consensus 22 GVL~aL~E~-gi--~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 22 GVINALKKV-GI--EIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHc-CC--CcCEEEEEcHHHHHHHHHHcCC
Confidence 355666554 44 5678999999999999998754
No 250
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.48 E-value=7.4 Score=31.06 Aligned_cols=38 Identities=18% Similarity=0.279 Sum_probs=28.0
Q ss_pred CCCcEEEEEEccChHHHHHHHhhc----C--ccceeeecCCcch
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKL----P--RLRGVVLHSGILS 73 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~----~--~v~~~v~~~~~~~ 73 (190)
..+|+.++|+|.|+-+....+..- . -|..+++++.+..
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 458999999999999988655422 1 5778888776543
No 251
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=78.01 E-value=4.7 Score=30.06 Aligned_cols=37 Identities=16% Similarity=0.105 Sum_probs=26.0
Q ss_pred HHHHHHHHHhCCC--CCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVS--QEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~--~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
.+++.+.+..+.+ ..--.+.|.|+||.+|+.++...+
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCCC
Confidence 4566777765532 113479999999999999987543
No 252
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=77.55 E-value=3.8 Score=29.06 Aligned_cols=36 Identities=36% Similarity=0.301 Sum_probs=26.6
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++ ++.++.-.++|-|.|+.++..++...+
T Consensus 16 GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEA-GVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 456666665 343335589999999999999998765
No 253
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=77.35 E-value=6.8 Score=30.86 Aligned_cols=55 Identities=20% Similarity=0.277 Sum_probs=39.1
Q ss_pred hhh-HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh---------cC--ccceeeecCCcch
Q 035673 19 YAD-IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK---------LP--RLRGVVLHSGILS 73 (190)
Q Consensus 19 ~~d-~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~---------~~--~v~~~v~~~~~~~ 73 (190)
..| ...+++|+.+..+....++.|.|-|.+|...-.+|.. .+ .++++++-+|..+
T Consensus 148 A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 148 AKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTD 214 (454)
T ss_pred HHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccC
Confidence 344 4445566666666667899999999999776666542 23 6889999888765
No 254
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=76.73 E-value=4.2 Score=28.63 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=24.6
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.+. ++ ..-.++|.|.|+.++..++...+
T Consensus 17 GvL~aL~e~-gi--~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 17 GFLAALLEM-GL--EPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHHc-CC--CceEEEEeCHHHHHHHHHHcCCC
Confidence 345555554 44 44579999999999999987553
No 255
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=75.32 E-value=7.1 Score=30.96 Aligned_cols=56 Identities=16% Similarity=0.150 Sum_probs=35.5
Q ss_pred CCCCCCCCC--CCCC---CchhhhHHHHHHHHHHHh---CCCCCcEEEEEEccChHHHHHHHhh
Q 035673 3 YSGYGASTG--KPSE---SNTYADIEAVYQCLQTEY---GVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 3 ~~G~G~s~~--~~~~---~~~~~d~~~~~~~~~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
--|-|.|.. .... ...-+|+..+.+.+.+.+ .-...+.+|+|-|+||.-+..+|..
T Consensus 155 PvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~ 218 (498)
T COG2939 155 PVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHE 218 (498)
T ss_pred CcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHH
Confidence 346666663 1111 233457777777666653 1122589999999999988877754
No 256
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=74.87 E-value=4.3 Score=29.57 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=24.8
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
-+++.+.+. ++ ..-.+.|.|+|+.++..+|...
T Consensus 27 GVL~aLeE~-gi--~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEA-GI--PIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHc-CC--CccEEEEECHHHHHHHHHHcCC
Confidence 356666544 44 4578999999999999998763
No 257
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=73.55 E-value=5.8 Score=26.63 Aligned_cols=34 Identities=29% Similarity=0.323 Sum_probs=25.2
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++ ++ ..-.++|.|.|+.++..++...+
T Consensus 17 Gvl~~L~e~-g~--~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 17 GVLRALEEE-GI--EIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHHC-CC--CeeEEEEeCHHHHHHHHHHcCCC
Confidence 355666554 33 45789999999999999887654
No 258
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=73.06 E-value=3.6 Score=30.61 Aligned_cols=28 Identities=25% Similarity=0.402 Sum_probs=21.1
Q ss_pred HHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 31 TEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 31 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
+..|+ .+-.++|||+|=+.|+.++....
T Consensus 79 ~~~Gi--~P~~v~GhSlGE~aA~~aaG~ls 106 (318)
T PF00698_consen 79 RSWGI--KPDAVIGHSLGEYAALVAAGALS 106 (318)
T ss_dssp HHTTH--CESEEEESTTHHHHHHHHTTSSS
T ss_pred ccccc--ccceeeccchhhHHHHHHCCccc
Confidence 44454 78899999999998887765443
No 259
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=72.32 E-value=5.5 Score=27.83 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=24.9
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 25 VYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
+++.+.+. ++ ..-.+.|.|.|+.+++.++...+
T Consensus 16 vl~aL~e~-g~--~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEA-GI--EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCc
Confidence 55556554 33 45689999999999999998764
No 260
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=71.18 E-value=5.2 Score=32.28 Aligned_cols=27 Identities=15% Similarity=0.179 Sum_probs=22.0
Q ss_pred HHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 31 TEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 31 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
+.+|+ ++-.++|||+|=+.|+..+.-.
T Consensus 260 ~~~GI--~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 260 DEFAI--KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HhcCC--CCCEEeecCHHHHHHHHHhCCC
Confidence 45666 6789999999999998888655
No 261
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=70.58 E-value=5.3 Score=29.64 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=23.7
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 25 VYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
+++.|.+. +...-.|.|.|+|+.++..+|...
T Consensus 29 Vl~aL~e~---gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEA---GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHc---CCCccEEEecCHHHHHHHHHHcCC
Confidence 34444443 336789999999999999999854
No 262
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=70.16 E-value=7.8 Score=25.93 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=24.6
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++ ++ ..-.++|.|.|+.++..++....
T Consensus 17 Gvl~~L~~~-~~--~~d~i~GtSaGal~a~~~a~g~~ 50 (175)
T cd07205 17 GVLKALEEA-GI--PIDIVSGTSAGAIVGALYAAGYS 50 (175)
T ss_pred HHHHHHHHc-CC--CeeEEEEECHHHHHHHHHHcCCC
Confidence 455666554 33 45689999999999999987643
No 263
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=69.65 E-value=8.1 Score=28.31 Aligned_cols=27 Identities=26% Similarity=0.349 Sum_probs=20.6
Q ss_pred HHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 31 TEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 31 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
+..|+ ++-.++|||+|-+.|+.++...
T Consensus 77 ~~~Gi--~p~~~~GhSlGE~aA~~~ag~~ 103 (298)
T smart00827 77 RSWGV--RPDAVVGHSLGEIAAAYVAGVL 103 (298)
T ss_pred HHcCC--cccEEEecCHHHHHHHHHhCCC
Confidence 34555 6789999999999988776543
No 264
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=69.23 E-value=7.9 Score=28.42 Aligned_cols=26 Identities=23% Similarity=0.106 Sum_probs=20.2
Q ss_pred HhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 32 EYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 32 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
..++ ++..++|||+|=+.|+.++...
T Consensus 72 ~~g~--~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 72 ALLP--RPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred hcCC--CCcEEeecCHHHHHHHHHhCCC
Confidence 3454 7889999999998888777544
No 265
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=68.68 E-value=13 Score=29.64 Aligned_cols=55 Identities=24% Similarity=0.399 Sum_probs=35.4
Q ss_pred CCchhhhHHHHHHHHHHH---hCCCCCcEEEEEEccChHHHHH-HHhh--cCccceeeecCC
Q 035673 15 ESNTYADIEAVYQCLQTE---YGVSQEDLILYGQSVGSGPTLH-LASK--LPRLRGVVLHSG 70 (190)
Q Consensus 15 ~~~~~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~-~a~~--~~~v~~~v~~~~ 70 (190)
..+.. |..-++.|+++. +|-+++++.++|-|.|+.-... +.+= ++-++..|+-|+
T Consensus 193 NmGl~-DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSG 253 (601)
T KOG4389|consen 193 NMGLL-DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSG 253 (601)
T ss_pred ccchH-HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcC
Confidence 33433 555677888876 5678999999999999865432 2221 114666666655
No 266
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=67.42 E-value=8.5 Score=27.82 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=24.7
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.+. ++. ..-.++|.|.|+.++..++....
T Consensus 15 Gvl~al~e~-~~~-~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 15 GVLDAFLEA-GIR-PFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHc-CCC-CCCEEEEECHHHHhHHHHHhCCc
Confidence 355666554 222 14589999999999999887754
No 267
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=66.90 E-value=9.2 Score=28.02 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=25.8
Q ss_pred CcEEEEEEccChHHHHHHHhhc----CccceeeecCCcc
Q 035673 38 EDLILYGQSVGSGPTLHLASKL----PRLRGVVLHSGIL 72 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~~~----~~v~~~v~~~~~~ 72 (190)
-++++.|-|+|++-+....... .++.+++..+|..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 4899999999998766544322 2688999888754
No 268
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=66.74 E-value=9.1 Score=27.89 Aligned_cols=23 Identities=26% Similarity=0.237 Sum_probs=18.9
Q ss_pred CcEEEEEEccChHHHHHHHhhcC
Q 035673 38 EDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
.+-.++|||+|=+.|+.++...+
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG~ls 105 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAGALD 105 (290)
T ss_pred CCCEEeecCHHHHHHHHHhCCCC
Confidence 67899999999998888776543
No 269
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=66.11 E-value=9.7 Score=28.26 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=23.3
Q ss_pred HHHHHHHHHhCCCCC--cEEEEEEccChHHHHHHHh
Q 035673 24 AVYQCLQTEYGVSQE--DLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~ 57 (190)
.+++.+.+..+.+.. -=.+.|.|.||.+|+.++.
T Consensus 25 ~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 25 EILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred HHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 456666666542211 1469999999999999876
No 270
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=65.74 E-value=7.2 Score=30.47 Aligned_cols=33 Identities=24% Similarity=0.219 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 25 VYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
+++.+.++ ++ .+-+|.|.|.|+.+|..++...+
T Consensus 91 VLkaL~E~-gl--~p~vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 91 VLKALFEA-NL--LPRIISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCH
Confidence 45555444 33 34589999999999999887544
No 271
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=63.49 E-value=3.9 Score=31.38 Aligned_cols=20 Identities=20% Similarity=0.184 Sum_probs=16.2
Q ss_pred CCcEEEEEEccChHHHHHHH
Q 035673 37 QEDLILYGQSVGSGPTLHLA 56 (190)
Q Consensus 37 ~~~~~l~G~S~Gg~~a~~~a 56 (190)
.++|.++|||+||.++..+.
T Consensus 149 i~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred cceeeeeeeecCCeeeeEEE
Confidence 37999999999998765443
No 272
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=63.11 E-value=8.1 Score=30.00 Aligned_cols=61 Identities=18% Similarity=0.148 Sum_probs=34.3
Q ss_pred hhhcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCC----CC--ChhHHHHHHHHHHH
Q 035673 95 KIKKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCN----LE--LYPDYIRHLCRFIQ 158 (190)
Q Consensus 95 ~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~----~~--~~~~~~~~i~~~l~ 158 (190)
.+++-...+++|+|++|++.-... .+.+ -.....+.+.||+.|.. +. +..+....|.+|..
T Consensus 346 Wvr~~~~rmlFVYG~nDPW~A~~f--~l~~-g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 346 WVRNNGPRMLFVYGENDPWSAEPF--RLGK-GKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHHhCCCeEEEEeCCCCCcccCcc--ccCC-CCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 445556789999999998753221 1111 11223455679999962 11 11234566666653
No 273
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=62.86 E-value=14 Score=25.20 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
+....++|....+++ +.|+|+|||-=|.+...+
T Consensus 66 ~~~asleyAv~~L~v--~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 66 NCLSVLQYAVDVLKV--KHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred chhhhHHHHHHhcCC--CEEEEecCCCchHHHHHH
Confidence 477889999999976 889999999766555443
No 274
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=62.36 E-value=17 Score=22.76 Aligned_cols=30 Identities=20% Similarity=0.293 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPT 52 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a 52 (190)
++...+++....+++ +.++++||+--|.+.
T Consensus 44 ~~~~sl~~av~~l~v--~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLGV--KHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhCC--CEEEEEccCCCcHHH
Confidence 688888999888866 889999996555443
No 275
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=61.44 E-value=9.1 Score=29.79 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=24.3
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++ ++ .+-+++|.|.|+.+|..++...+
T Consensus 84 GVlkaL~e~-gl--lp~iI~GtSAGAivaalla~~t~ 117 (407)
T cd07232 84 GVVKALLDA-DL--LPNVISGTSGGSLVAALLCTRTD 117 (407)
T ss_pred HHHHHHHhC-CC--CCCEEEEECHHHHHHHHHHcCCH
Confidence 345555554 23 45679999999999999998543
No 276
>PLN03006 carbonate dehydratase
Probab=60.87 E-value=14 Score=27.37 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHH
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTL 53 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 53 (190)
+...++|...++++ +.|+|+|||-=|.+..
T Consensus 158 ~~aSLEYAV~~L~V--~~IVV~GHs~CGaV~A 187 (301)
T PLN03006 158 TKAALEFSVNTLNV--ENILVIGHSRCGGIQA 187 (301)
T ss_pred hhhhHHHHHHHhCC--CEEEEecCCCchHHHH
Confidence 67899999999977 8899999996554443
No 277
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=60.41 E-value=16 Score=26.30 Aligned_cols=36 Identities=25% Similarity=0.216 Sum_probs=23.7
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++-. ....-.+.|-|+|+.++..++...+
T Consensus 17 GVl~aL~e~g~-~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 17 GVAVCLKKYAP-HLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHHhCc-ccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 35566666521 1112239999999999999887644
No 278
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.21 E-value=4.8 Score=26.84 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=25.6
Q ss_pred CcEEEEEEccChHHHHHHHhhcCccceeeecCC
Q 035673 38 EDLILYGQSVGSGPTLHLASKLPRLRGVVLHSG 70 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~ 70 (190)
+.+.++.+|||-.+|-++....+ +++.+.+++
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~-lksatAiNG 88 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIR-LKSATAING 88 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhcc-ccceeeecC
Confidence 67899999999999999887765 666666654
No 279
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=58.19 E-value=8.7 Score=24.00 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=24.2
Q ss_pred cEEEEE-EccChHHHHHHHhhcCccceeeecC
Q 035673 39 DLILYG-QSVGSGPTLHLASKLPRLRGVVLHS 69 (190)
Q Consensus 39 ~~~l~G-~S~Gg~~a~~~a~~~~~v~~~v~~~ 69 (190)
++.|+| ..+.|...+.++..+|.++-+.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeee
Confidence 578999 8899999999999999666554443
No 280
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=57.62 E-value=18 Score=25.91 Aligned_cols=36 Identities=14% Similarity=0.070 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCCCCC--cEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQE--DLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++ ++... .-.++|.|.|+.++..++...+
T Consensus 16 GVl~~L~e~-g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 16 GVASALREH-APRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHHHHc-CcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 345555554 22111 2389999999999999988654
No 281
>PLN03014 carbonic anhydrase
Probab=56.54 E-value=16 Score=27.64 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEcc-ChHHHH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSV-GSGPTL 53 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~-Gg~~a~ 53 (190)
++...++|....+++ +.|+|+|||- ||.-++
T Consensus 205 ~v~asLEYAV~~L~V--~~IVV~GHs~CGaV~Aa 236 (347)
T PLN03014 205 GVGAAIEYAVLHLKV--ENIVVIGHSACGGIKGL 236 (347)
T ss_pred cchhHHHHHHHHhCC--CEEEEeCCCCchHHHHH
Confidence 467899999999976 7899999995 444443
No 282
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=56.52 E-value=18 Score=26.10 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=24.5
Q ss_pred HHHHHHHHHhCCC--CCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVS--QEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~--~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++ ++. ...-.++|-|.|+.++..++...+
T Consensus 21 GVl~~L~e~-g~~l~~~~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 21 GVASCLLEH-APFLVANARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred HHHHHHHhc-CCcccccCCeEEEEcHHHHHHHHHHcCCC
Confidence 355666655 211 113568999999999999887654
No 283
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=56.46 E-value=29 Score=20.31 Aligned_cols=37 Identities=22% Similarity=0.193 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
+...+++-+++.+|. +.|.|.|.+....+|..+..-.
T Consensus 28 ~~~~~~~~l~~~LG~--QdV~V~Gip~~sh~ArvLVeAD 64 (84)
T PF07643_consen 28 GPAAWVDGLRQALGP--QDVTVYGIPADSHFARVLVEAD 64 (84)
T ss_pred CHHHHHHHHHHHhCC--ceeEEEccCCccHHHHHHHHhh
Confidence 456688888888864 8999999999999998876543
No 284
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=56.22 E-value=16 Score=28.34 Aligned_cols=22 Identities=14% Similarity=0.089 Sum_probs=18.8
Q ss_pred CcEEEEEEccChHHHHHHHhhc
Q 035673 38 EDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
.+-+|.|.|.|+.+|..+|...
T Consensus 111 ~p~~i~GtS~Gaivaa~~a~~~ 132 (391)
T cd07229 111 LPRIITGTATGALIAALVGVHT 132 (391)
T ss_pred CCceEEEecHHHHHHHHHHcCC
Confidence 4567999999999999999854
No 285
>PLN03019 carbonic anhydrase
Probab=55.87 E-value=16 Score=27.49 Aligned_cols=31 Identities=19% Similarity=0.272 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTL 53 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 53 (190)
.+...++|....+++ +.|+|+|||-=|.+..
T Consensus 200 ~v~aSIEYAV~~L~V--~~IVV~GHs~CGaVkA 230 (330)
T PLN03019 200 GVGAAIEYAVLHLKV--ENIVVIGHSACGGIKG 230 (330)
T ss_pred ccchhHHHHHHHhCC--CEEEEecCCCchHHHH
Confidence 467889999999977 8899999996554443
No 286
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=55.48 E-value=7.7 Score=27.99 Aligned_cols=16 Identities=31% Similarity=0.750 Sum_probs=13.1
Q ss_pred CCCcEEEEEEccChHH
Q 035673 36 SQEDLILYGQSVGSGP 51 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~ 51 (190)
+...|+++|||+|..=
T Consensus 233 ~i~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVD 248 (270)
T ss_pred CCCEEEEEeCCCchhh
Confidence 4478999999999753
No 287
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=55.11 E-value=14 Score=30.18 Aligned_cols=53 Identities=19% Similarity=0.253 Sum_probs=35.8
Q ss_pred hhhhHHHHHHHHHHH---hCCCCCcEEEEEEccChHHHHHHHhh----cC-ccceeeecCC
Q 035673 18 TYADIEAVYQCLQTE---YGVSQEDLILYGQSVGSGPTLHLASK----LP-RLRGVVLHSG 70 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~----~~-~v~~~v~~~~ 70 (190)
..+.+.-+.-|+.+. +|...++|+++|-|.||.+.+-.+.+ .= ..+++++..+
T Consensus 446 aleEv~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 446 ALEEVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred HHHHHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 345666666777664 56778999999999999875544433 21 3467776554
No 288
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=55.00 E-value=20 Score=23.52 Aligned_cols=31 Identities=23% Similarity=0.077 Sum_probs=21.9
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccChHHHHHHH
Q 035673 25 VYQCLQTEYGVSQEDLILYGQSVGSGPTLHLA 56 (190)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 56 (190)
+++.+.++- +....-.+.|.|.|+.++..++
T Consensus 16 vl~~l~~~~-~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAERG-LLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHhC-CccCCCEEEEEcHHHHHHHHHh
Confidence 455555542 2224568899999999999988
No 289
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=54.78 E-value=22 Score=25.72 Aligned_cols=36 Identities=25% Similarity=0.507 Sum_probs=24.2
Q ss_pred HHHHHHHHHhCCC--CCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVS--QEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~--~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
-+++.+.++ +.+ ...-.++|.|.|+.++..++...+
T Consensus 17 GVl~aL~e~-~~~l~~~~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 17 GVTRCLSER-APHLLRDARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred HHHHHHHHh-CcchhccCCEEEEEcHHHHHHHHHHhCCC
Confidence 355566555 211 124579999999999999987654
No 290
>PLN00416 carbonate dehydratase
Probab=54.78 E-value=22 Score=25.80 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
.+...++|....+++ +.|+|+|||-=|.+...+
T Consensus 125 ~~~asLEyAv~~L~V--~~IVV~GHs~CGaV~Aa~ 157 (258)
T PLN00416 125 GVGAAVEYAVVHLKV--ENILVIGHSCCGGIKGLM 157 (258)
T ss_pred cchhHHHHHHHHhCC--CEEEEecCCCchHHHHHH
Confidence 466789999999977 789999999555444433
No 291
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=54.56 E-value=23 Score=24.37 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
+...++|....+++ +.|+|+|||-=|.+...+
T Consensus 73 ~~asleyav~~l~v--~~ivV~GH~~Cgav~Aa~ 104 (190)
T cd00884 73 TSAAIEYAVAVLKV--EHIVVCGHSDCGGIRALL 104 (190)
T ss_pred hhhhHHHHHHHhCC--CEEEEeCCCcchHHHHHh
Confidence 67889999999976 789999999655554443
No 292
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=54.53 E-value=54 Score=24.23 Aligned_cols=48 Identities=19% Similarity=0.213 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHHhCCCCC-cEEEEEEccChHHHHHHHhhcC-ccceeeec
Q 035673 20 ADIEAVYQCLQTEYGVSQE-DLILYGQSVGSGPTLHLASKLP-RLRGVVLH 68 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~ 68 (190)
+--.+.++.+.+.+++.+. ++-=+|.++|+. +..+|..+. +|.++-+.
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l-~~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGL-AIYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHH-HHHHHHHcCCEEEEeeCC
Confidence 3455677888888877654 555599999984 455666654 56565544
No 293
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=53.93 E-value=18 Score=27.17 Aligned_cols=32 Identities=25% Similarity=0.252 Sum_probs=22.2
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 25 VYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
+++.+.++ ++ .+-++.|.|.|+.+|..++...
T Consensus 86 VlkaL~e~-gl--~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 86 VVRTLVEH-QL--LPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCC
Confidence 44444444 33 4557999999999999888753
No 294
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=53.64 E-value=18 Score=26.85 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=22.4
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 25 VYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
+++.+.+. ++ .+-.+.|.|.|+.+|..++...
T Consensus 87 vl~aL~e~-~l--~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 87 VVKALWEQ-DL--LPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HHHHHHHc-CC--CCCEEEEEcHHHHHHHHHHcCC
Confidence 44444443 33 3457999999999999988754
No 295
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=53.63 E-value=24 Score=23.63 Aligned_cols=27 Identities=11% Similarity=0.219 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEcc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSV 47 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~ 47 (190)
++..+++.+.+...+....+.++|.|.
T Consensus 2 q~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 2 QLRQALEELLEQANLKPGQIFVVGCST 28 (172)
T ss_dssp -HHHHHHHHHHHS---TT-EEEEEE-H
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 566778888887777788999999994
No 296
>PRK15219 carbonic anhydrase; Provisional
Probab=53.38 E-value=26 Score=25.25 Aligned_cols=34 Identities=9% Similarity=0.129 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
.++...++|....+++ +.|+|+|||-=|.+...+
T Consensus 127 ~~~~~slEyAv~~L~v--~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 127 DDLLGSMEFACAVAGA--KVVLVMGHTACGAVKGAI 160 (245)
T ss_pred cchhhHHHHHHHHcCC--CEEEEecCCcchHHHHHH
Confidence 3677899999999976 789999999655554433
No 297
>PRK13690 hypothetical protein; Provisional
Probab=52.98 E-value=34 Score=23.19 Aligned_cols=30 Identities=10% Similarity=0.171 Sum_probs=25.3
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEcc
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSV 47 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~ 47 (190)
..+++..+++.+.+...+....+.++|.|-
T Consensus 6 i~~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 6 IKKQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 456788888888888888889999999994
No 298
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=52.92 E-value=17 Score=27.14 Aligned_cols=22 Identities=23% Similarity=0.219 Sum_probs=18.8
Q ss_pred CCcEEEEEEccChHHHHHHHhh
Q 035673 37 QEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 37 ~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
..+.++.|||+|=+.|+.++..
T Consensus 84 ~~p~~~aGHSlGEysAl~~ag~ 105 (310)
T COG0331 84 VKPDFVAGHSLGEYSALAAAGV 105 (310)
T ss_pred CCCceeecccHhHHHHHHHccc
Confidence 4778999999999999887764
No 299
>PLN02154 carbonic anhydrase
Probab=51.08 E-value=29 Score=25.65 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
.+.+.++|....+++ +.|+|+|||-=|.+...+
T Consensus 151 ~~~aslEyAv~~L~v--~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 151 ETNSALEFAVTTLQV--ENIIVMGHSNCGGIAALM 183 (290)
T ss_pred chhhHHHHHHHHhCC--CEEEEecCCCchHHHHHH
Confidence 467789999999976 789999999544444433
No 300
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=49.87 E-value=15 Score=24.38 Aligned_cols=23 Identities=22% Similarity=0.141 Sum_probs=17.8
Q ss_pred CCcEEEEEEccChHHHHHHHhhc
Q 035673 37 QEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 37 ~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
...-.+.|.|.||.+++.++...
T Consensus 26 ~~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 26 ERFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp CT-SEEEEECCHHHHHHHHHTC-
T ss_pred CCccEEEEcChhhhhHHHHHhCC
Confidence 35568999999999998887764
No 301
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=49.77 E-value=23 Score=25.37 Aligned_cols=33 Identities=21% Similarity=0.157 Sum_probs=22.1
Q ss_pred HHHHHHHHHhCCC--CCcEEEEEEccChHHHHHHHh
Q 035673 24 AVYQCLQTEYGVS--QEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 24 ~~~~~~~~~~~~~--~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
-+++.+.++ ++. .+.-.++|.|+|+.++..++.
T Consensus 16 GVl~~L~e~-g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 16 GAAKALLRH-GKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHc-CchhhccCCEEEEECHHHHHHHHHhc
Confidence 355566554 221 012479999999999999984
No 302
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=49.74 E-value=1e+02 Score=22.61 Aligned_cols=110 Identities=14% Similarity=0.020 Sum_probs=53.1
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcchhhhhhhcccccc------chhh---hcchh
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGILSGLRVLCHVKFTF------CCDI---YKNIN 94 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~ 94 (190)
++++.++++.. ..-.|+|-+.|..++..++..-. ++-++..+.- .++......+.. ..+. +. .+
T Consensus 2 eil~~l~~~i~---~~~pIig~gaGtGlsAk~ae~gG-aDlI~~ynsG--rfR~~G~~SlagllpygnaN~iv~em~-~e 74 (268)
T PF09370_consen 2 EILDRLRAQIK---AGKPIIGAGAGTGLSAKCAEKGG-ADLILIYNSG--RFRMAGRGSLAGLLPYGNANEIVMEMA-RE 74 (268)
T ss_dssp HHHHHHHHHHH---TT--EEEEEESSHHHHHHHHHTT--SEEEE-HHH--HHHHTT--GGGGGBTEEEHHHHHHHHH-HH
T ss_pred hHHHHHHHHHh---CCCceEEEeeccchhhHHHHhcC-CCEEEEecch--hHhhCCCcchhhhhcccCHhHHHHHHH-Hh
Confidence 46777777764 23568888999999999988764 5555554421 111111111110 0000 11 23
Q ss_pred hhhcCC-CceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcC
Q 035673 95 KIKKVK-CPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHC 141 (190)
Q Consensus 95 ~~~~~~-~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~ 141 (190)
-+..++ +|++.-.+..|++.+......-.+.+.= .-+.-||..|..
T Consensus 75 iLp~v~~tPViaGv~atDP~~~~~~fl~~lk~~Gf-~GV~NfPTvgli 121 (268)
T PF09370_consen 75 ILPVVKDTPVIAGVCATDPFRDMDRFLDELKELGF-SGVQNFPTVGLI 121 (268)
T ss_dssp HGGG-SSS-EEEEE-TT-TT--HHHHHHHHHHHT--SEEEE-S-GGG-
T ss_pred hhhhccCCCEEEEecCcCCCCcHHHHHHHHHHhCC-ceEEECCcceee
Confidence 344444 9999999999998766544443333332 245667877765
No 303
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=49.52 E-value=27 Score=29.54 Aligned_cols=20 Identities=25% Similarity=0.190 Sum_probs=17.3
Q ss_pred CcEEEEEEccChHHHHHHHh
Q 035673 38 EDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a~ 57 (190)
.--+|.|.|+||+++..+|.
T Consensus 66 ~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 66 RVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCceEEeeCHHHHHHHHHHc
Confidence 45689999999999998886
No 304
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=49.20 E-value=22 Score=24.80 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHh
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
.++...++|....+++ +.|+|+||+-=|++...+..
T Consensus 76 ~~~l~sleyAv~~L~v--~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 76 GSVLRSLEYAVYVLGV--KEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred cchhHHHHHHHHHcCC--CEEEEecCCCcHHHHhcccc
Confidence 5788899999999976 88999999876655554443
No 305
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=49.03 E-value=15 Score=27.93 Aligned_cols=20 Identities=25% Similarity=0.139 Sum_probs=17.1
Q ss_pred EEEEEEccChHHHHHHHhhc
Q 035673 40 LILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 40 ~~l~G~S~Gg~~a~~~a~~~ 59 (190)
=.+.|.|.||.+|+.++...
T Consensus 43 DlIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 43 DFVGGTSTGSIIAACIALGM 62 (344)
T ss_pred cEEEEecHHHHHHHHHHcCC
Confidence 47899999999999998643
No 306
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=48.37 E-value=52 Score=21.42 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=25.6
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
.+....+++....+++ +.++|+||+-=|.+...+
T Consensus 39 ~~~~~sle~av~~l~v--~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 39 DSALASLEYAVYHLGV--KEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp HHHHHHHHHHHHTST---SEEEEEEETT-HHHHHHH
T ss_pred cchhhheeeeeecCCC--CEEEEEcCCCchHHHHHH
Confidence 5678889999888866 889999999777666443
No 307
>PRK10437 carbonic anhydrase; Provisional
Probab=48.29 E-value=35 Score=24.15 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
+....++|....+++ +.|+|+||+-=|.+...+
T Consensus 76 ~~~~~leyAV~~L~v--~~IvV~GHt~CG~V~Aal 108 (220)
T PRK10437 76 NCLSVVQYAVDVLEV--EHIIICGHYGCGGVQAAV 108 (220)
T ss_pred chHHHHHHHHHHcCC--CEEEEeCCCCchHHHHHH
Confidence 467888998888876 789999999666555444
No 308
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=48.29 E-value=29 Score=24.54 Aligned_cols=26 Identities=12% Similarity=0.119 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHHhC----CCCCcEEEEEEc
Q 035673 21 DIEAVYQCLQTEYG----VSQEDLILYGQS 46 (190)
Q Consensus 21 d~~~~~~~~~~~~~----~~~~~~~l~G~S 46 (190)
-+..++||+....+ +..+++.++|.|
T Consensus 108 ~LKNaiDwls~~~~~~~~~~~KpvaivgaS 137 (219)
T TIGR02690 108 SQKDQIDWIPLSVGPVRPTQGKTLAVMQVS 137 (219)
T ss_pred HHHHHHHhcccCcccccccCCCcEEEEEeC
Confidence 34455666654321 234566666666
No 309
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=48.15 E-value=36 Score=22.81 Aligned_cols=27 Identities=22% Similarity=0.373 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEcc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSV 47 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~ 47 (190)
++..+++.+.+...+....+.++|.|-
T Consensus 2 ~~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T TIGR01440 2 QLTTVLEELKDASNLKKGDLFVIGCST 28 (172)
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 456777888888777888999999994
No 310
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=47.05 E-value=15 Score=26.94 Aligned_cols=36 Identities=25% Similarity=0.229 Sum_probs=23.9
Q ss_pred HHHHHHHHHhC-CCCCcEEEEEEccChHHHHHHHhhc
Q 035673 24 AVYQCLQTEYG-VSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 24 ~~~~~~~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
.+++.+.++.. +...--.++|.|.||.+|+.++...
T Consensus 19 ~vL~~Le~~~~~~~~~fD~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 19 VLLKRLAEEFPSFLDQIDLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred HHHHHHHHhCcccccceeEEEEeCHHHHHHHHHHcCc
Confidence 35556655521 1112348999999999999998764
No 311
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=46.83 E-value=56 Score=24.42 Aligned_cols=45 Identities=11% Similarity=0.215 Sum_probs=36.5
Q ss_pred CchhhhHHHHHHHHHHHhCC--CCCcEEEEEEccChHHHHHHHhhcC
Q 035673 16 SNTYADIEAVYQCLQTEYGV--SQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 16 ~~~~~d~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
...-..+.+.+++++..-.+ .++++.|+|-|-|=.+|.+.++.+.
T Consensus 18 ~GCe~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 18 YGCEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred ccHHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 45566788899999887544 4689999999999999999887764
No 312
>COG0218 Predicted GTPase [General function prediction only]
Probab=46.82 E-value=24 Score=24.49 Aligned_cols=26 Identities=19% Similarity=0.272 Sum_probs=20.4
Q ss_pred hhhhhcCCCceEEEEcCCCceeechh
Q 035673 93 INKIKKVKCPVLVIHGTEDDVVNWLH 118 (190)
Q Consensus 93 ~~~~~~~~~P~l~i~g~~D~~v~~~~ 118 (190)
.+.+.....|++++...-|.+-..+.
T Consensus 128 ~~~l~~~~i~~~vv~tK~DKi~~~~~ 153 (200)
T COG0218 128 IEFLLELGIPVIVVLTKADKLKKSER 153 (200)
T ss_pred HHHHHHcCCCeEEEEEccccCChhHH
Confidence 45677889999999999999765443
No 313
>PRK02929 L-arabinose isomerase; Provisional
Probab=46.66 E-value=1.6e+02 Score=23.95 Aligned_cols=79 Identities=15% Similarity=0.229 Sum_probs=43.3
Q ss_pred ccceeeecCCcchhhhhhhccccccchhhhcchhhhhcCCCceEEEEcCCCceeech-----------------hHHHHH
Q 035673 61 RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKVKCPVLVIHGTEDDVVNWL-----------------HGNKLW 123 (190)
Q Consensus 61 ~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~-----------------~~~~~~ 123 (190)
.+.++|+..+-+.....+ ...++.+++|+++++-...+-+|+. ..-...
T Consensus 72 ~~dgvi~~m~TFs~a~~~--------------i~~~~~l~~PvL~~~~Q~~~e~p~~~id~d~m~lnqs~~G~~e~~~il 137 (499)
T PRK02929 72 NCAGVITWMHTFSPAKMW--------------IRGLSALQKPLLHLHTQFNAEIPWDTIDMDFMNLNQSAHGDREFGFIG 137 (499)
T ss_pred CCcEEEEccCCCchHHHH--------------HHHHHHcCCCEEEEecCCCccCCCCCCCcchhhhhhcccChHHHHHHH
Confidence 588888765533322221 2346778999999988322222221 111112
Q ss_pred HHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHHHh
Q 035673 124 KMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQEM 160 (190)
Q Consensus 124 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~ 160 (190)
.++..+ +.++- ||+ +.+++.+.|.+|++..
T Consensus 138 ~R~gi~--~~~v~--G~~---~d~~v~~~i~~w~raa 167 (499)
T PRK02929 138 ARLRKQ--RKVVV--GHW---QDPEVQERIGAWMRVA 167 (499)
T ss_pred HHcCCC--eeEEE--EeC---CCHHHHHHHHHHHHHH
Confidence 223322 22322 673 6678999999999754
No 314
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=45.02 E-value=6.2 Score=29.79 Aligned_cols=34 Identities=21% Similarity=0.110 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
..++++.|...---..+...+.|-|.||..++.=
T Consensus 160 w~av~~eLl~kGms~Ak~alLsGcSAGGLa~iLh 193 (402)
T KOG4287|consen 160 WLAVMDELLAKGMSNAKQALLSGCSAGGLASILH 193 (402)
T ss_pred HHHHHHHHHHhhhhHHHHHHhhcCCccchhheee
Confidence 3445555554422245678999999999877643
No 315
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=44.63 E-value=41 Score=21.83 Aligned_cols=28 Identities=11% Similarity=0.011 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSG 50 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 50 (190)
+....+.+....+++ +.++++||+-=|.
T Consensus 41 ~~~~sl~~av~~l~~--~~IiV~gHt~Cg~ 68 (142)
T cd03379 41 DAIRSLVVSVYLLGT--REIIVIHHTDCGM 68 (142)
T ss_pred hHHHHHHHHHHHhCC--CEEEEEeecCCcc
Confidence 667778888888865 8899999984443
No 316
>PF02610 Arabinose_Isome: L-arabinose isomerase; InterPro: IPR003762 The Escherichia coli araBAD operon consists of three genes encoding three enzymes that convert L-arabinose to D-xylulose-5 phosphate. L-arabinose isomerase (AraA) 5.3.1.4 from EC catalyses the conversion of L-arabinose to L-ribulose as the first step in the pathway of L-arabinose utilization as a carbon source [].; GO: 0008733 L-arabinose isomerase activity, 0008152 metabolic process; PDB: 4F2D_A 2AJT_C 2HXG_C.
Probab=43.86 E-value=1.5e+02 Score=22.86 Aligned_cols=61 Identities=10% Similarity=0.223 Sum_probs=32.0
Q ss_pred hhhhcCCCceEEEEcCCCceeechhHHH-H----------------HHHhCCCCceEEecCCCcCCCCChhHHHHHHHHH
Q 035673 94 NKIKKVKCPVLVIHGTEDDVVNWLHGNK-L----------------WKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRF 156 (190)
Q Consensus 94 ~~~~~~~~P~l~i~g~~D~~v~~~~~~~-~----------------~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~ 156 (190)
..++.+++|+++++-..++-+|++...- + ..++.. +..++ .||+ +.++++++|.+|
T Consensus 91 ~gl~~l~kPllhl~tQ~~~~ip~~~iDmd~MnlNqsAHgdrEfg~i~~R~gi--~~kvV--~G~w---~D~~v~~~I~~W 163 (359)
T PF02610_consen 91 PGLQRLQKPLLHLHTQPNRAIPWDTIDMDFMNLNQSAHGDREFGFIFSRMGI--PRKVV--VGHW---QDEEVWAEIGDW 163 (359)
T ss_dssp HHHHH--S-EEEEE--SSSS--TTT--HHHHHSS-HHHHHHHHHHHHHHTT----EEEE--ES-T---T-HHHHHHHHHH
T ss_pred HHHHHhCCCeEEeecccccCCCcccCCHHHHHHhhcccccHHHHHHHHHhCC--CcCeE--eeeC---CCHHHHHHHHHH
Confidence 5677899999999999888888654431 1 122222 23333 3784 467899999999
Q ss_pred HHHhh
Q 035673 157 IQEME 161 (190)
Q Consensus 157 l~~~~ 161 (190)
++...
T Consensus 164 ~rAA~ 168 (359)
T PF02610_consen 164 MRAAA 168 (359)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 97643
No 317
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=42.24 E-value=19 Score=26.17 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHh
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
.+.+++++....+++ +.|.++|||.=|.++..+.-
T Consensus 139 ~~~AalE~aV~~lkv--enIiv~ghs~cgGik~~m~~ 173 (276)
T KOG1578|consen 139 NVGAALEYAVTTLKV--ENIIVIGHSLCGGIKGLMSF 173 (276)
T ss_pred cccchHHHHHHHhcc--ceEEEeccccCCchhhcccc
Confidence 455788999999877 88999999987766655543
No 318
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=41.35 E-value=16 Score=27.10 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=15.2
Q ss_pred EEEEEccChHHHHHHHh
Q 035673 41 ILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 41 ~l~G~S~Gg~~a~~~a~ 57 (190)
.+.|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 79999999999998864
No 319
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=40.89 E-value=61 Score=21.48 Aligned_cols=30 Identities=13% Similarity=0.201 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPT 52 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a 52 (190)
+....+++....+++ +.++|+|||-=|.+.
T Consensus 77 ~~~~sl~yav~~l~v--~~IvV~GHt~CG~~~ 106 (154)
T cd03378 77 DVLGSLEYAVEVLGV--PLVVVLGHESCGAVA 106 (154)
T ss_pred hHHHHHHHHHHHhCC--CEEEEEcCCCccHHH
Confidence 567788888888866 789999999844443
No 320
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=40.71 E-value=2e+02 Score=23.33 Aligned_cols=101 Identities=13% Similarity=0.188 Sum_probs=55.4
Q ss_pred cEEEEEEccChHHHHHHHhhc---CccceeeecCCcchhhhhhhccccccchhhhcchhhhhcCCCceEEEEcCCCceee
Q 035673 39 DLILYGQSVGSGPTLHLASKL---PRLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKIKKVKCPVLVIHGTEDDVVN 115 (190)
Q Consensus 39 ~~~l~G~S~Gg~~a~~~a~~~---~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~ 115 (190)
+++..|--.-.--+..+.... +.+.++|+..+-+..-..+ ...++.+++|+++++-....-+|
T Consensus 41 ~v~~~~~v~~~~~i~~~~~~~~~~~~~dgvi~~m~TFs~a~~~--------------i~~~~~l~~PvL~~~~q~~~~l~ 106 (484)
T cd03557 41 KIVFKPVLTTPDEILAVCREANADDNCAGVITWMHTFSPAKMW--------------IAGLTALQKPLLHLHTQFNREIP 106 (484)
T ss_pred EEEEccccCCHHHHHHHHHHccccCCccEEEEccCCCchHHHH--------------HHHHHHcCCCEEEEccCCCccCC
Confidence 455555444444444544443 3688888766543322221 23467789999998877533333
Q ss_pred chh----HHH-------------HHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHHHh
Q 035673 116 WLH----GNK-------------LWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQEM 160 (190)
Q Consensus 116 ~~~----~~~-------------~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~ 160 (190)
+.. ... ...++.. .+.++- ||+ +.+++.+.|.+|++..
T Consensus 107 ~~sidmd~m~l~qaahG~~e~~~il~R~gi--~~~~v~--G~~---~d~~~~~~i~~w~raa 161 (484)
T cd03557 107 WDTIDMDFMNLNQSAHGDREFGFIGSRMRI--PRKVVV--GHW---QDPEVHEKIGDWMRAA 161 (484)
T ss_pred CCCccchHHhhhhhcCCcHHHHHHHHHcCC--CeeEEE--EeC---CCHHHHHHHHHHHHHH
Confidence 322 111 1222222 223332 673 6678999999999754
No 321
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=39.04 E-value=20 Score=25.75 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCCC----CCcEEEEEEccChHHHHHHHhh
Q 035673 24 AVYQCLQTEYGVS----QEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 24 ~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
.+++.+.+.++.. ..--.++|.|.||.+|+.++..
T Consensus 16 ~~L~~le~~~~~~~~~~~~fd~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 16 EILAELEKRLGKPSRIADLFDLIAGTSTGGIIALGLALG 54 (258)
T ss_pred HHHHHHHHHhCCCCchhhccceeeeccHHHHHHHHHhcC
Confidence 3556666665321 1124689999999999999887
No 322
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=39.02 E-value=47 Score=25.09 Aligned_cols=20 Identities=30% Similarity=0.306 Sum_probs=16.2
Q ss_pred EEEEEEccChHHHHHHHhhc
Q 035673 40 LILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 40 ~~l~G~S~Gg~~a~~~a~~~ 59 (190)
-.++|||+|=+.|+.++...
T Consensus 126 ~~~~GHSlGE~aA~~~AG~l 145 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGAL 145 (343)
T ss_pred CeeeeccHHHHHHHHHhCCC
Confidence 46899999999988877543
No 323
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=38.39 E-value=19 Score=27.38 Aligned_cols=19 Identities=26% Similarity=0.240 Sum_probs=16.8
Q ss_pred EEEEEEccChHHHHHHHhh
Q 035673 40 LILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 40 ~~l~G~S~Gg~~a~~~a~~ 58 (190)
-.|.|.|.||.+|+.++..
T Consensus 45 DliaGTStGgiiA~~la~~ 63 (349)
T cd07214 45 DVIAGTSTGGLITAMLTAP 63 (349)
T ss_pred CEEeeCCHHHHHHHHHhcC
Confidence 4789999999999999874
No 324
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=37.22 E-value=20 Score=26.91 Aligned_cols=17 Identities=24% Similarity=0.186 Sum_probs=14.9
Q ss_pred EEEEEccChHHHHHHHh
Q 035673 41 ILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 41 ~l~G~S~Gg~~a~~~a~ 57 (190)
.+.|.|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 78999999999988764
No 325
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=36.44 E-value=59 Score=25.46 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=21.2
Q ss_pred CceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcC
Q 035673 101 CPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHC 141 (190)
Q Consensus 101 ~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~ 141 (190)
..+++..|..|++-... ..+........+++++++|+
T Consensus 377 tnviFtNG~~DPW~~lg----v~~~~~~~~~~~~I~g~~Hc 413 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG----VTSDSSDSVPAIVIPGGAHC 413 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TT
T ss_pred CeEEeeCCCCCCccccc----CCCCCCCCcccEEECCCeee
Confidence 68999999999976544 22223333345678999997
No 326
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=36.13 E-value=79 Score=26.13 Aligned_cols=46 Identities=11% Similarity=0.228 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEE------ccChHHHHHHHhhcCccceeeecCC
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQ------SVGSGPTLHLASKLPRLRGVVLHSG 70 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~------S~Gg~~a~~~a~~~~~v~~~v~~~~ 70 (190)
.+..++..+... .++++++|| +.|+.+++...+..-.-.+.+.+.|
T Consensus 325 vis~al~d~i~e----~d~VfImGHk~pDmDalGsAig~~~~A~~~~~~a~~v~dp 376 (655)
T COG3887 325 VISTALSDIIKE----SDNVFIMGHKFPDMDALGSAIGMQKFASMNNKEAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHhh----cCcEEEEccCCCChHHHHHHHHHHHHHHhcccccEEEECc
Confidence 444444444433 378999999 6899998886665542256777765
No 327
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=35.90 E-value=48 Score=24.75 Aligned_cols=24 Identities=33% Similarity=0.256 Sum_probs=19.4
Q ss_pred CCCcEEEEEEccChHHHHHHHhhc
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
..-++.|+|+|-|+.+.-.+....
T Consensus 191 ~~~~~~LiGFSKGcvVLNqll~El 214 (303)
T PF10561_consen 191 SKPPLTLIGFSKGCVVLNQLLYEL 214 (303)
T ss_pred cCCceEEEEecCcchHHHHHHHHH
Confidence 446899999999999887776653
No 328
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=35.68 E-value=47 Score=25.70 Aligned_cols=19 Identities=21% Similarity=0.099 Sum_probs=16.6
Q ss_pred EEEEEEccChHHHHHHHhh
Q 035673 40 LILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 40 ~~l~G~S~Gg~~a~~~a~~ 58 (190)
-.++|.|.|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 4599999999999988876
No 329
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=35.21 E-value=1.6e+02 Score=20.76 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=61.6
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC--ccceeeecCCcchhhhhhhccccccchhhhcchhhh
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP--RLRGVVLHSGILSGLRVLCHVKFTFCCDIYKNINKI 96 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (190)
.+.+..+.+++.+.. ..+.-|+|.++|=.+..++..-.= ..++.=+ .........+...+...+
T Consensus 76 ~dWI~KLcs~~kkld---~mkkkvlGICFGHQiiara~Gg~Vgra~KG~~~-----------~lg~itivk~~~~~~~yF 141 (245)
T KOG3179|consen 76 ADWIKKLCSFVKKLD---FMKKKVLGICFGHQIIARAKGGKVGRAPKGPDL-----------GLGSITIVKDAEKPEKYF 141 (245)
T ss_pred chHHHHHHHHHHHHH---hhccceEEEeccHHHHHHhhCCccccCCCCCcc-----------cccceEEEEecccchhhc
Confidence 334555666665553 345778999999888777653210 1111000 000011111222233444
Q ss_pred hcCCCceEEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCC-CCChhHHHH
Q 035673 97 KKVKCPVLVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCN-LELYPDYIR 151 (190)
Q Consensus 97 ~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~-~~~~~~~~~ 151 (190)
..+..-+-++..-+|.++.......+...... +++.++.-..|.. +..+|++..
T Consensus 142 G~~~~~l~IikcHqDevle~PE~a~llasSe~-ceve~fs~~~~~l~fQGHPEyn~ 196 (245)
T KOG3179|consen 142 GEIPKSLNIIKCHQDEVLELPEGAELLASSEK-CEVEMFSIEDHLLCFQGHPEYNK 196 (245)
T ss_pred ccchhhhhHHhhcccceecCCchhhhhccccc-cceEEEEecceEEEecCCchhhH
Confidence 55555566777888998866555554433222 4666665566753 455566663
No 330
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=35.04 E-value=1e+02 Score=23.51 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=30.5
Q ss_pred CCCCCcEEEEEEccChHHHHHHHhhcC----------ccceeeecCCcchhh
Q 035673 34 GVSQEDLILYGQSVGSGPTLHLASKLP----------RLRGVVLHSGILSGL 75 (190)
Q Consensus 34 ~~~~~~~~l~G~S~Gg~~a~~~a~~~~----------~v~~~v~~~~~~~~~ 75 (190)
.....+++|+.-|.||-+|..++.... .+.++++-.++.++.
T Consensus 118 e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~ 169 (414)
T KOG1283|consen 118 EFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPE 169 (414)
T ss_pred cccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChh
Confidence 345679999999999999988876431 466777766655543
No 331
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=34.91 E-value=1e+02 Score=20.56 Aligned_cols=37 Identities=14% Similarity=0.063 Sum_probs=20.1
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcC-ccceeeecCCcc
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLP-RLRGVVLHSGIL 72 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~-~v~~~v~~~~~~ 72 (190)
...+++++|-|..|.+-+.++...+ .+..++=.+|..
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~K 104 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPLK 104 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT--TTTS--EEES-GGG
T ss_pred cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChhh
Confidence 4478999999999999888887755 466666555543
No 332
>PRK13938 phosphoheptose isomerase; Provisional
Probab=34.05 E-value=1.2e+02 Score=21.01 Aligned_cols=38 Identities=18% Similarity=0.304 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
-+.++.+.+.+.+. ...+++++|.+-.|.+|..++.+.
T Consensus 30 ~~~~~a~~~~~~l~-~g~rI~i~G~G~S~~~A~~fa~~L 67 (196)
T PRK13938 30 AARAIGDRLIAGYR-AGARVFMCGNGGSAADAQHFAAEL 67 (196)
T ss_pred HHHHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHHHc
Confidence 34444455544444 458999999999999999998764
No 333
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=33.01 E-value=32 Score=27.55 Aligned_cols=25 Identities=16% Similarity=0.074 Sum_probs=20.1
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcC
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
+--|=+|.|.|+||.+|..++.+.-
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~ 224 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSN 224 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcch
Confidence 4456789999999999998887753
No 334
>PRK04148 hypothetical protein; Provisional
Probab=32.65 E-value=1.4e+02 Score=19.31 Aligned_cols=34 Identities=9% Similarity=0.145 Sum_probs=23.2
Q ss_pred HHHHHHHHhCC-CCCcEEEEEEccChHHHHHHHhh
Q 035673 25 VYQCLQTEYGV-SQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 25 ~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
+.+++.+.+.. ...++..+|-..|..+|..++..
T Consensus 4 i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 4 IAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred HHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHC
Confidence 44556555531 23579999999888788877754
No 335
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=32.28 E-value=1.2e+02 Score=20.94 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
+.+.++.+.+.+.+. ..+++.++|-.-.|.+|..++.+
T Consensus 25 ~~i~~a~~~l~~~l~-~~~rI~~~G~GgSa~~A~~~a~~ 62 (196)
T PRK10886 25 DAISRAAMTLVQSLL-NGNKILCCGNGTSAANAQHFAAS 62 (196)
T ss_pred HHHHHHHHHHHHHHH-cCCEEEEEECcHHHHHHHHHHHH
Confidence 456666666666554 45899999999999999998875
No 336
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=31.40 E-value=1.1e+02 Score=19.55 Aligned_cols=39 Identities=15% Similarity=0.251 Sum_probs=26.4
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
+.+.++.+.+.+.+. ...+++++|..-.+.++.+++.+.
T Consensus 19 ~~i~~aa~~i~~~~~-~gg~i~~~G~G~S~~~a~~~~~~~ 57 (138)
T PF13580_consen 19 EAIEKAADLIAEALR-NGGRIFVCGNGHSAAIASHFAADL 57 (138)
T ss_dssp HHHHHHHHHHHHHHH-TT--EEEEESTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-CCCEEEEEcCchhhhHHHHHHHHH
Confidence 356666666666664 457999999887777888877664
No 337
>COG4475 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.38 E-value=1.1e+02 Score=20.26 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=25.8
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccCh
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGS 49 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 49 (190)
...|...+++.+.+...+....++++|-|-.-
T Consensus 4 l~k~~~~vl~d~~~~s~lk~g~lfvlG~StSE 35 (180)
T COG4475 4 LKKDTRTVLDDVQDQSELKQGQLFVLGLSTSE 35 (180)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEecchHh
Confidence 34578888888888877788999999999543
No 338
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=30.63 E-value=1.1e+02 Score=22.89 Aligned_cols=36 Identities=6% Similarity=-0.022 Sum_probs=27.4
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
.+++.+.+++++++++ ..-++|-|+|+.+++.+..-
T Consensus 119 ~YW~El~~i~~w~~~~------~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 119 DYWDELKEILDWAKTH------VTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred chHHHHHHHHHHHHHc------CCCEEEEcHHHHHHHHHcCC
Confidence 3455688888888765 25789999999998876654
No 339
>PRK13936 phosphoheptose isomerase; Provisional
Probab=30.19 E-value=1.4e+02 Score=20.63 Aligned_cols=38 Identities=11% Similarity=0.226 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
.+.++++.+.+.+. ..+++.++|.+-.+.+|..++...
T Consensus 28 ~i~~a~~~~~~~l~-~a~~I~i~G~G~S~~~A~~~~~~l 65 (197)
T PRK13936 28 PIAQAVELMVQALL-NEGKILACGNGGSAADAQHFSAEL 65 (197)
T ss_pred HHHHHHHHHHHHHH-CCCEEEEEeCcHhHHHHHHHHHHc
Confidence 34455555555543 558999999998888888877643
No 340
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=30.07 E-value=42 Score=26.56 Aligned_cols=52 Identities=12% Similarity=0.005 Sum_probs=32.3
Q ss_pred EEEEcCCCceeechhHHHHHHHhCCCCceEEecCCCcCCCCChhHHHHHHHHHHHH
Q 035673 104 LVIHGTEDDVVNWLHGNKLWKMARDPYEPLWIKGGGHCNLELYPDYIRHLCRFIQE 159 (190)
Q Consensus 104 l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~ 159 (190)
-++++..|..|+.+.++.. . +. ......++ +.|..+...+++.+.|..||..
T Consensus 370 ~~~y~dGDGTV~~~S~~~~-~-~~-~~~~~~l~-~~H~~il~n~~v~~~I~~fL~~ 421 (440)
T PLN02733 370 EYTYVDGDGTVPVESAKAD-G-LN-AVARVGVP-GDHRGILRDEHVFRILKHWLKV 421 (440)
T ss_pred eEEEeCCCCEEecchhhcc-C-cc-ccccccCC-chHHHHhcCHHHHHHHHHHHhc
Confidence 3444566777776665432 1 11 11223344 7898777788999999999953
No 341
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=29.75 E-value=61 Score=23.23 Aligned_cols=25 Identities=24% Similarity=0.469 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCCCCcEEEEEEcc
Q 035673 23 EAVYQCLQTEYGVSQEDLILYGQSV 47 (190)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~l~G~S~ 47 (190)
..++.|+.+.++++.++++++|-|.
T Consensus 167 ~~Al~~L~~~~~~~~~~vl~aGDSg 191 (247)
T PF05116_consen 167 GAALRYLMERWGIPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHHHT--GGGEEEEESSG
T ss_pred HHHHHHHHHHhCCCHHHEEEEeCCC
Confidence 3688999999998888999999884
No 342
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=29.60 E-value=1.3e+02 Score=20.65 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHh
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
+.+.++++.+.+.+. ..+++.++|..-.+.+|..++.
T Consensus 28 ~~i~~a~~~i~~al~-~~~rI~i~G~G~S~~~A~~~a~ 64 (192)
T PRK00414 28 HAIQRAAVLIADSFK-AGGKVLSCGNGGSHCDAMHFAE 64 (192)
T ss_pred HHHHHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHH
Confidence 456667777776654 4589999999999998888873
No 343
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=27.58 E-value=1.4e+02 Score=19.65 Aligned_cols=51 Identities=8% Similarity=0.116 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHhC----CCCCcEEEEEEccChHHHHHHHhhcCccceeeecCCcc
Q 035673 21 DIEAVYQCLQTEYG----VSQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHSGIL 72 (190)
Q Consensus 21 d~~~~~~~~~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~~~~ 72 (190)
--.++.+++.+..+ +++++|++..-+..+...+..+...| =+.+++-.|..
T Consensus 97 lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dp-GD~VlVp~P~Y 151 (153)
T PLN02994 97 FRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADP-GDAFLVPTPYY 151 (153)
T ss_pred HHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCC-CCEEEEeCCCC
Confidence 34455666766655 45667777655555555554444444 25566666654
No 344
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.21 E-value=1.2e+02 Score=22.73 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=23.0
Q ss_pred HHHHhC--CCCCcEEEEEEc--cChHHHHHHHhhc
Q 035673 29 LQTEYG--VSQEDLILYGQS--VGSGPTLHLASKL 59 (190)
Q Consensus 29 ~~~~~~--~~~~~~~l~G~S--~Gg~~a~~~a~~~ 59 (190)
+.++++ +...++.++|.| ||-.++..+....
T Consensus 149 lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g 183 (301)
T PRK14194 149 LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH 183 (301)
T ss_pred HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC
Confidence 334444 456899999997 9999998887654
No 345
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=26.80 E-value=72 Score=23.60 Aligned_cols=22 Identities=9% Similarity=0.083 Sum_probs=17.2
Q ss_pred cEEEEEEccChHHHHHHHhhcC
Q 035673 39 DLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 39 ~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
+|+|+|-+.+|..+..++++..
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G 24 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAG 24 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHhcc
Confidence 5899999999999888888764
No 346
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=26.80 E-value=1.7e+02 Score=23.12 Aligned_cols=47 Identities=17% Similarity=0.312 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHhC-CCCCcEEEEEEc-cChHHHHHHHhhcCccceeeecC
Q 035673 21 DIEAVYQCLQTEYG-VSQEDLILYGQS-VGSGPTLHLASKLPRLRGVVLHS 69 (190)
Q Consensus 21 d~~~~~~~~~~~~~-~~~~~~~l~G~S-~Gg~~a~~~a~~~~~v~~~v~~~ 69 (190)
-...+++..++.++ +...++.++|-+ ||..++-+++... +..+...+
T Consensus 161 i~saAv~lA~~~~~~L~~~~vlvIGAGem~~lva~~L~~~g--~~~i~IaN 209 (414)
T COG0373 161 ISSAAVELAKRIFGSLKDKKVLVIGAGEMGELVAKHLAEKG--VKKITIAN 209 (414)
T ss_pred hHHHHHHHHHHHhcccccCeEEEEcccHHHHHHHHHHHhCC--CCEEEEEc
Confidence 34566777777776 567899999999 7777777776653 45555444
No 347
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=26.77 E-value=96 Score=21.10 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
-+..++||+-.. .+..+++.+++.|.|+.-+...
T Consensus 85 ~lKnaiD~l~~~-~~~~Kpv~~~~~s~g~~~~~~a 118 (184)
T COG0431 85 ALKNAIDWLSRE-ALGGKPVLLLGTSGGGAGGLRA 118 (184)
T ss_pred HHHHHHHhCCHh-HhCCCcEEEEecCCCchhHHHH
Confidence 344555555544 1234566666666666555543
No 348
>PF00691 OmpA: OmpA family; InterPro: IPR006665 This entry represents domain with a beta/alpha/beta/alpha-beta(2) structure found in the C-terminal region of many Gram-negative bacterial outer membrane proteins [], such as porin-like integral membrane proteins (such as ompA) [], small lipid-anchored proteins (such as pal) [], and MotB proton channels []. The N-terminal half is variable although some of the proteins in this group have the OmpA-like transmembrane domain IPR000498 from INTERPRO at the N terminus. OmpA from Escherichia coli is required for pathogenesis, and can interact with host receptor molecules []. MotB (and MotA) serves two functions in E. coli, the MotA(4)-MotB(2) complex attaches to the cell wall via MotB to form the stator of the flagellar motor, and the MotA-MotB complex couples the flow of ions across the cell membrane to movement of the rotor [].; GO: 0009279 cell outer membrane; PDB: 1OAP_A 2W8B_G 2HQS_C 4ERH_A 2ZF8_A 2ZOV_A 2ZVZ_B 2ZVY_A 3TD4_B 3TD5_D ....
Probab=26.04 E-value=1.4e+02 Score=17.33 Aligned_cols=25 Identities=32% Similarity=0.396 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQS 46 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S 46 (190)
-...+.++|.+ .|++.+++.+.|+.
T Consensus 55 RA~~V~~~L~~-~gi~~~ri~~~~~G 79 (97)
T PF00691_consen 55 RAEAVKQYLVE-NGIPPERISVVGYG 79 (97)
T ss_dssp HHHHHHHHHHH-TTSSGGGEEEEEET
T ss_pred HHHHHHHHHHH-cCCChHhEEEEEEc
Confidence 35566677776 67888888887664
No 349
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=25.96 E-value=43 Score=21.91 Aligned_cols=12 Identities=25% Similarity=0.315 Sum_probs=10.5
Q ss_pred EEEEEEccChHH
Q 035673 40 LILYGQSVGSGP 51 (190)
Q Consensus 40 ~~l~G~S~Gg~~ 51 (190)
..++|.|.|+++
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 689999999976
No 350
>PF01187 MIF: Macrophage migration inhibitory factor (MIF); InterPro: IPR001398 Macrophage migration inhibitory factor (MIF) is a key regulatory cytokine within innate and adaptive immune responses, capable of promoting and modulating the magnitude of the response []. MIF is released from T-cells and macrophages, and acts within the neuroendocrine system. MIF is capable of tautomerase activity, although its biological function has not been fully characterised. It is induced by glucocorticoid and is capable of overriding the anti-inflammatory actions of glucocorticoid []. MIF regulates cytokine secretion and the expression of receptors involved in the immune response. It can be taken up into target cells in order to interact with intracellular signalling molecules, inhibiting p53 function, and/or activating components of the mitogen-activated protein kinase and Jun-activation domain-binding protein-1 (Jab-1) []. MIF has been linked to various inflammatory diseases, such as rheumatoid arthritis and atherosclerosis []. The MIF homologue D-dopachrome tautomerase (4.1.1.84 from EC) is involved in detoxification through the conversion of dopaminechrome (and possibly norepinephrinechrome), the toxic quinine product of the neurotransmitter dopamine (and norepinephrine), to an indole derivative that can serve as a precursor to neuromelanin [, ].; PDB: 1UIZ_C 3FWT_A 1HFO_F 2WKB_D 3RF4_B 2OS5_A 3RF5_A 2XCZ_A 3FWU_A 3B64_A ....
Probab=25.74 E-value=1e+02 Score=19.06 Aligned_cols=26 Identities=15% Similarity=0.276 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQS 46 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S 46 (190)
-..++.+++.++++++.++++|.=+.
T Consensus 75 ~s~~i~~~l~~~LgIp~~Riyi~f~d 100 (114)
T PF01187_consen 75 YSAAITEFLEEELGIPPDRIYINFHD 100 (114)
T ss_dssp HHHHHHHHHHHHHT--GGGEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCcCceEEEEEE
Confidence 46677888999999999999886443
No 351
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=25.61 E-value=1.3e+02 Score=20.41 Aligned_cols=27 Identities=7% Similarity=0.209 Sum_probs=17.7
Q ss_pred hhHHHHHHHHHHHhCCCCCcEEEEEEccCh
Q 035673 20 ADIEAVYQCLQTEYGVSQEDLILYGQSVGS 49 (190)
Q Consensus 20 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 49 (190)
+++.++++++.+...- .+ .|+=|++||
T Consensus 89 ~~l~~~v~~i~~~~~~--g~-kVvVHC~~G 115 (180)
T COG2453 89 EDLDKIVDFIEEALSK--GK-KVVVHCQGG 115 (180)
T ss_pred HHHHHHHHHHHHHHhc--CC-eEEEEcCCC
Confidence 6888899999888742 22 444455554
No 352
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=25.24 E-value=1.3e+02 Score=16.61 Aligned_cols=45 Identities=16% Similarity=0.265 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCCCcEEEEEEc-cChHHHHHHHhhcCccceeeecCCcch
Q 035673 25 VYQCLQTEYGVSQEDLILYGQS-VGSGPTLHLASKLPRLRGVVLHSGILS 73 (190)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~G~S-~Gg~~a~~~a~~~~~v~~~v~~~~~~~ 73 (190)
.++.+.+.+++++++++++|-| .--..+...+. +..+.+..+...
T Consensus 9 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G----~~~ilV~tG~~~ 54 (75)
T PF13242_consen 9 MLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAG----IDTILVLTGVYS 54 (75)
T ss_dssp HHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTT----SEEEEESSSSSC
T ss_pred HHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcC----CcEEEECCCCCC
Confidence 4566667778888999999999 66655555442 556666555443
No 353
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=25.19 E-value=39 Score=22.92 Aligned_cols=37 Identities=5% Similarity=0.014 Sum_probs=27.4
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
.+++.+.++++|.+++. ...+|-++|+..++.++...
T Consensus 82 ~Yw~El~~i~dwa~~~v------~stl~iCWgaqaal~~~yGi 118 (175)
T cd03131 82 DYWEELTEILDWAKTHV------TSTLFSCWAAMAALYYFYGI 118 (175)
T ss_pred chHHHHHHHHHHHHHhC------cchHHHHHHHHHHHHHHcCc
Confidence 34567889999998653 46778899998888877543
No 354
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=25.07 E-value=98 Score=22.91 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=23.4
Q ss_pred CCCcEEEEEEccChHHHHHHHhhcCccceeeecC
Q 035673 36 SQEDLILYGQSVGSGPTLHLASKLPRLRGVVLHS 69 (190)
Q Consensus 36 ~~~~~~l~G~S~Gg~~a~~~a~~~~~v~~~v~~~ 69 (190)
+++++.++|-..|| +++.+.+++.+..++++.
T Consensus 76 ~pk~VLiiGgGdG~--tlRevlkh~~ve~i~~VE 107 (282)
T COG0421 76 NPKRVLIIGGGDGG--TLREVLKHLPVERITMVE 107 (282)
T ss_pred CCCeEEEECCCccH--HHHHHHhcCCcceEEEEE
Confidence 44699999999999 455556666577777655
No 355
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=24.68 E-value=1e+02 Score=23.70 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=20.9
Q ss_pred CCcEEEEEEccChHHHHHHHhh-cC-ccc
Q 035673 37 QEDLILYGQSVGSGPTLHLASK-LP-RLR 63 (190)
Q Consensus 37 ~~~~~l~G~S~Gg~~a~~~a~~-~~-~v~ 63 (190)
..+++++|-|.||.-|+..... .| .+.
T Consensus 156 ~~~iV~IGaStGGp~AL~~il~~lP~~~p 184 (350)
T COG2201 156 ARKIVAIGASTGGPAALRAVLPALPADFP 184 (350)
T ss_pred CccEEEEEeCCCCHHHHHHHHHhCCCCCC
Confidence 4589999999999999986654 45 454
No 356
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=24.47 E-value=1.7e+02 Score=17.72 Aligned_cols=40 Identities=18% Similarity=0.358 Sum_probs=26.0
Q ss_pred HHHHHHHHhCCCCCcEEEEEEccChH--HHHHHHhhcC-ccceee
Q 035673 25 VYQCLQTEYGVSQEDLILYGQSVGSG--PTLHLASKLP-RLRGVV 66 (190)
Q Consensus 25 ~~~~~~~~~~~~~~~~~l~G~S~Gg~--~a~~~a~~~~-~v~~~v 66 (190)
.++.+.+.+ +..+++++|-|--.= +-..++..+| +|.++.
T Consensus 54 ~i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~ 96 (100)
T PF09949_consen 54 NIERILRDF--PERKFILIGDSGQHDPEIYAEIARRFPGRILAIY 96 (100)
T ss_pred HHHHHHHHC--CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEE
Confidence 444455555 668999999986543 2344667778 776664
No 357
>PTZ00450 macrophage migration inhibitory factor-like protein; Provisional
Probab=24.25 E-value=1.1e+02 Score=19.10 Aligned_cols=25 Identities=16% Similarity=0.328 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhCCCCCcEEEEEEc
Q 035673 22 IEAVYQCLQTEYGVSQEDLILYGQS 46 (190)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~l~G~S 46 (190)
-..+.+++.+++++++++++|-=+.
T Consensus 78 s~~i~~~l~~~LgIp~dRiYI~f~d 102 (113)
T PTZ00450 78 TPRITAAITKECGIPAERIYVFYYS 102 (113)
T ss_pred HHHHHHHHHHHcCCCcccEEEEEEc
Confidence 4567788888999999999886544
No 358
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=23.81 E-value=1.5e+02 Score=19.74 Aligned_cols=34 Identities=9% Similarity=0.156 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
++.++++.+. ..+++.++|....+.+|..+..+.
T Consensus 19 ~~~~~~~~l~-----~a~~I~i~G~G~S~~~A~~~~~~l 52 (179)
T TIGR03127 19 ELDKLADKII-----KAKRIFVAGAGRSGLVGKAFAMRL 52 (179)
T ss_pred HHHHHHHHHH-----hCCEEEEEecCHHHHHHHHHHHHH
Confidence 4555555554 337899999988777777666554
No 359
>cd06583 PGRP Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of
Probab=23.56 E-value=1.8e+02 Score=17.84 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=23.9
Q ss_pred chhhhHHHHHHHHHHHhCCCCCcEEEEEEccCh
Q 035673 17 NTYADIEAVYQCLQTEYGVSQEDLILYGQSVGS 49 (190)
Q Consensus 17 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 49 (190)
..++-+..++.++.+.++++ ..-.|+||....
T Consensus 86 ~q~~~~~~L~~~l~~~~~i~-~~~~i~~H~~~~ 117 (126)
T cd06583 86 AQLEALAELLAYLVKRYGIP-PDYRIVGHRDVS 117 (126)
T ss_pred HHHHHHHHHHHHHHHhCCCC-CCCEEEecccCC
Confidence 34556778888888888774 367899998754
No 360
>PF07640 QPP: QPP; InterPro: IPR011507 These Rhodopirellula baltica proteins share a highly conserved sequence, centred around an invariant QPP motif, at their N termini. This motif may represent an export signal.
Probab=23.44 E-value=52 Score=15.76 Aligned_cols=11 Identities=36% Similarity=0.265 Sum_probs=7.1
Q ss_pred ccccCCCCCCC
Q 035673 180 IRSNTNTGSAN 190 (190)
Q Consensus 180 ~~~~~~~~~~~ 190 (190)
.+..+++||+|
T Consensus 5 QPPLTRcGSiN 15 (36)
T PF07640_consen 5 QPPLTRCGSIN 15 (36)
T ss_pred CCCcccccccc
Confidence 34466777776
No 361
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=23.42 E-value=2.4e+02 Score=20.58 Aligned_cols=52 Identities=17% Similarity=0.180 Sum_probs=39.3
Q ss_pred hhhhHHHHHHHHHHHhCCCCCcEEEEEEccChHH-HHHHHhhcCccceeeecCCcc
Q 035673 18 TYADIEAVYQCLQTEYGVSQEDLILYGQSVGSGP-TLHLASKLPRLRGVVLHSGIL 72 (190)
Q Consensus 18 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~-a~~~a~~~~~v~~~v~~~~~~ 72 (190)
+.+|..++++...+. +...+.++|.+....- ++.++..+|.+-..+.+-|..
T Consensus 15 ~~~d~~~vi~~a~~~---gv~~~~~~g~~~~~~~~~~~la~~y~~v~~~~G~HP~~ 67 (256)
T COG0084 15 FDEDRDEVIARAREA---GVKKMVVVGTDLEDFKRALELAEKYPNVYAAVGVHPLD 67 (256)
T ss_pred hcCCHHHHHHHHHHc---CCcEEEEeecCHHHHHHHHHHHHhCCCeEEEEeeCCCc
Confidence 344677777666554 3378999999999887 788888888777777777765
No 362
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=22.94 E-value=2.2e+02 Score=18.97 Aligned_cols=39 Identities=18% Similarity=0.243 Sum_probs=27.2
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
.+.+.++++.+.+.+. ..++++++|-...+.+|..++..
T Consensus 16 ~~~i~~a~~~i~~~i~-~~~~I~i~G~G~S~~~A~~~~~~ 54 (177)
T cd05006 16 AEAIEQAAQLLAEALL-NGGKILICGNGGSAADAQHFAAE 54 (177)
T ss_pred HHHHHHHHHHHHHHHH-CCCEEEEEeCcHHHHHHHHHHHH
Confidence 3467777777777542 34789999998777777666543
No 363
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=22.68 E-value=98 Score=22.79 Aligned_cols=35 Identities=17% Similarity=-0.008 Sum_probs=24.0
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcC
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLP 60 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~ 60 (190)
.++|.+...-.. .=-.++|.|+|+..+..+....+
T Consensus 28 GVLD~fl~a~~~--~f~~~~GvSAGA~n~~aYls~Q~ 62 (292)
T COG4667 28 GVLDEFLRANFN--PFDLVVGVSAGALNLVAYLSKQR 62 (292)
T ss_pred HHHHHHHHhccC--CcCeeeeecHhHHhHHHHhhcCC
Confidence 456666533211 22368999999999999988876
No 364
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=22.63 E-value=1.5e+02 Score=18.24 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEE
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILY 43 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~ 43 (190)
-..++.+.+.+.++++++++.|.
T Consensus 77 l~~~i~~~l~~~lgi~~~rv~I~ 99 (116)
T PTZ00397 77 IAAAITKILASHLKVKSERVYIE 99 (116)
T ss_pred HHHHHHHHHHHHhCcCcccEEEE
Confidence 45567788888899999998875
No 365
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=22.62 E-value=1e+02 Score=30.61 Aligned_cols=26 Identities=27% Similarity=0.267 Sum_probs=20.1
Q ss_pred HHhCCCCCcEEEEEEccChHHHHHHHhh
Q 035673 31 TEYGVSQEDLILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 31 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 58 (190)
+.+|+ .+-.++|||+|=+.|+.++..
T Consensus 669 ~~~Gi--~Pd~v~GHSlGE~aAa~aAGv 694 (2582)
T TIGR02813 669 TQAGF--KADMTAGHSFGELSALCAAGV 694 (2582)
T ss_pred HHcCC--ccceeecCCHHHHHHHHHhCC
Confidence 45666 667999999999888877643
No 366
>PF14987 NADHdh_A3: NADH dehydrogenase 1 alpha subcomplex subunit 3
Probab=22.33 E-value=1.7e+02 Score=16.93 Aligned_cols=26 Identities=12% Similarity=0.257 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHH
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGP 51 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 51 (190)
++-.+++..+ +.+++.++.+..||..
T Consensus 4 r~~afLKnAW--aKEPVlvvSf~ig~la 29 (84)
T PF14987_consen 4 RLGAFLKNAW--AKEPVLVVSFVIGGLA 29 (84)
T ss_pred HHHHHHHHhh--hcCCeEEeeehhhhhh
Confidence 3455666666 5689999999888854
No 367
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=22.09 E-value=1.6e+02 Score=18.89 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=22.5
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
..+..+.+.++++++.+.++|-|.....+..-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~ 168 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKE 168 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHH
Confidence 45667777778788888888888855544443
No 368
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=22.01 E-value=1.9e+02 Score=20.93 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKL 59 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 59 (190)
.+.++++.+.+.+. ...+++++|..-.|.++..-+...
T Consensus 34 ~I~~av~~~~~~l~-~ggrl~~~GaGtSg~la~~da~e~ 71 (257)
T cd05007 34 QIARAVDAAAERLR-AGGRLIYVGAGTSGRLGVLDASEL 71 (257)
T ss_pred HHHHHHHHHHHHHH-cCCEEEEEcCcHHHHHHHHHHHhc
Confidence 35555666666654 457999999999999997655544
No 369
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc). Xsc plays a key role in the degradation of taurine, catalyzing the desulfonation of 2-sulfoacetaldehyde into sulfite and acetyl phosphate. This enzyme requires TPP and divalent metal ions for activity.
Probab=21.93 E-value=1e+02 Score=21.19 Aligned_cols=19 Identities=16% Similarity=0.020 Sum_probs=13.0
Q ss_pred hhcCCCceEEEEcCCCcee
Q 035673 96 IKKVKCPVLVIHGTEDDVV 114 (190)
Q Consensus 96 ~~~~~~P~l~i~g~~D~~v 114 (190)
..+.+.|++++.-.+..+-
T Consensus 93 a~~~~lpvi~vV~NN~~yg 111 (196)
T cd02013 93 AVRHKLPVTAVVFRNRQWG 111 (196)
T ss_pred HHHhCCCeEEEEEECchhH
Confidence 4456788888887776653
No 370
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=21.64 E-value=3.6e+02 Score=20.33 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHhC------C-CCCcEEEEEEccChHHHHH-HHhhcCccceeeecCCcchhhhhhhccccccchhhhcc
Q 035673 21 DIEAVYQCLQTEYG------V-SQEDLILYGQSVGSGPTLH-LASKLPRLRGVVLHSGILSGLRVLCHVKFTFCCDIYKN 92 (190)
Q Consensus 21 d~~~~~~~~~~~~~------~-~~~~~~l~G~S~Gg~~a~~-~a~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (190)
.+.++++++.+.-. + .+.+|-++-||..|.+... +|..+|-|-..++-.|-.... ..+..+..-.
T Consensus 101 k~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass~ptvv~YvvDt~rs~~p-------~tFMSNMlYA 173 (366)
T KOG1532|consen 101 KFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASSFPTVVVYVVDTPRSTSP-------TTFMSNMLYA 173 (366)
T ss_pred HHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhcCCeEEEEEecCCcCCCc-------hhHHHHHHHH
Confidence 34455555555421 1 3568899999998887766 455667555555544432211 1111222222
Q ss_pred hhhhhcCCCceEEEEcCCCceeechhHHHH
Q 035673 93 INKIKKVKCPVLVIHGTEDDVVNWLHGNKL 122 (190)
Q Consensus 93 ~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~ 122 (190)
..-+-+.+.|.+++....|- .....+.+|
T Consensus 174 cSilyktklp~ivvfNK~Dv-~d~~fa~eW 202 (366)
T KOG1532|consen 174 CSILYKTKLPFIVVFNKTDV-SDSEFALEW 202 (366)
T ss_pred HHHHHhccCCeEEEEecccc-cccHHHHHH
Confidence 23344667899999998885 444444433
No 371
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS. AHAS catalyzes the condensation of two molecules of pyruvate to give the acetohydroxyacid, 2-acetolactate. 2-Acetolactate is the precursor of the branched chain amino acids, valine and leucine. AHAS also catalyzes the condensation of pyruvate and 2-ketobutyrate to form 2-aceto-2-hydroxybutyrate in isoleucine biosynthesis. In addition to requiring TPP and a divalent metal ion as cofactors, AHAS requires FAD.
Probab=21.36 E-value=1.3e+02 Score=20.32 Aligned_cols=18 Identities=11% Similarity=0.202 Sum_probs=11.8
Q ss_pred hhcCCCceEEEEcCCCce
Q 035673 96 IKKVKCPVLVIHGTEDDV 113 (190)
Q Consensus 96 ~~~~~~P~l~i~g~~D~~ 113 (190)
..+.+.|++++.-.+..+
T Consensus 90 a~~~~lpi~ivV~nN~~~ 107 (186)
T cd02015 90 AAQYNLPVKIVILNNGSL 107 (186)
T ss_pred HHHhCCCeEEEEEECCcc
Confidence 445567887777777654
No 372
>cd08757 SAM_PNT_ESE Sterile alpha motif (SAM)/Pointed domain of ESE-like ETS transcriptional regulators. SAM Pointed domain of ESE-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. ETS factors are important for cell differentiation. They can be involved in regulation of gene expression in different types of epithelial cells. They are expressed in salivary gland, intestine, stomach, pancreas, lungs, kidneys, colon, mammary gland, and prostate. Members of this group are proto-oncogenes. Expression profiles of these factors are altered in epithelial cancers, which makes them potential targets for cancer therapy.
Probab=21.25 E-value=1.6e+02 Score=16.41 Aligned_cols=37 Identities=8% Similarity=0.057 Sum_probs=27.7
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHH
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHL 55 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 55 (190)
.++|..++.++.++++++...+-+-.+.|-|.....+
T Consensus 7 ~~~V~~Wl~w~~~e~~l~~~~i~~~~F~m~Gk~LC~m 43 (68)
T cd08757 7 KNDVLEWLQFVAEQNKLDAECISFQKFNIDGQTLCSM 43 (68)
T ss_pred HHHHHHHHHHHHHHcCCCCCcCCccccCCCHHHHHcC
Confidence 3589999999999888776667777778888554443
No 373
>PRK03482 phosphoglycerate mutase; Provisional
Probab=21.22 E-value=2.5e+02 Score=19.39 Aligned_cols=17 Identities=12% Similarity=0.126 Sum_probs=10.8
Q ss_pred CcEEEEEEccChHHHHHHH
Q 035673 38 EDLILYGQSVGSGPTLHLA 56 (190)
Q Consensus 38 ~~~~l~G~S~Gg~~a~~~a 56 (190)
+.+.||+| |+.+.+.++
T Consensus 143 ~~vliVsH--g~~i~~l~~ 159 (215)
T PRK03482 143 SRPLLVSH--GIALGCLVS 159 (215)
T ss_pred CeEEEEeC--cHHHHHHHH
Confidence 56888888 565544443
No 374
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=21.12 E-value=1.2e+02 Score=20.37 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=25.7
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHh
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLAS 57 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 57 (190)
+.+..+.+.++++++.++++|-|....-++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag 183 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVAD 183 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcC
Confidence 3556666777777788999999998877776653
No 375
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=21.10 E-value=1.8e+02 Score=16.73 Aligned_cols=29 Identities=14% Similarity=0.133 Sum_probs=19.8
Q ss_pred CCCceEEEEcCCCceeechhHHHHHHHhC
Q 035673 99 VKCPVLVIHGTEDDVVNWLHGNKLWKMAR 127 (190)
Q Consensus 99 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~~ 127 (190)
...|++++.+.+...++....+.+.+.+.
T Consensus 37 ~~PPtFv~f~N~~~~~~~sY~ryL~n~lR 65 (80)
T PF14714_consen 37 TRPPTFVLFVNDPELLPESYKRYLENQLR 65 (80)
T ss_dssp TTTTEEEEEES-CCC--HHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcccCCHHHHHHHHHHHH
Confidence 56899999999888888777666665554
No 376
>PF13059 DUF3922: Protein of unknown function (DUF3992)
Probab=20.95 E-value=1.7e+02 Score=16.17 Aligned_cols=26 Identities=15% Similarity=0.266 Sum_probs=19.7
Q ss_pred hhhHHHHHHHHHHHhCCCCCcEEEEE
Q 035673 19 YADIEAVYQCLQTEYGVSQEDLILYG 44 (190)
Q Consensus 19 ~~d~~~~~~~~~~~~~~~~~~~~l~G 44 (190)
......+++.+++++.++.+.|.++-
T Consensus 9 lg~yvnalqal~eqy~vetd~iaiie 34 (79)
T PF13059_consen 9 LGNYVNALQALCEQYDVETDCIAIIE 34 (79)
T ss_pred HHHHHHHHHHHHHHhccccCeEEEEE
Confidence 34566788889999988878887764
No 377
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=20.84 E-value=2.3e+02 Score=18.96 Aligned_cols=85 Identities=14% Similarity=0.208 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHhCCCCCcEEEEEEccChHHHHHHHhhcCccc-eeeecCCcchhhhhhhcccc-------ccchhhhcc
Q 035673 21 DIEAVYQCLQTEYGVSQEDLILYGQSVGSGPTLHLASKLPRLR-GVVLHSGILSGLRVLCHVKF-------TFCCDIYKN 92 (190)
Q Consensus 21 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~v~-~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 92 (190)
++.++++.+. ..++|.++|....+.+|..++.+.-++. .+.+..... ......... ....+....
T Consensus 22 ~l~~~~~~i~-----~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~--~~~~~~~D~vI~iS~sG~t~~~i~~ 94 (179)
T cd05005 22 ELDKLISAIL-----NAKRIFVYGAGRSGLVAKAFAMRLMHLGLNVYVVGETT--TPAIGPGDLLIAISGSGETSSVVNA 94 (179)
T ss_pred HHHHHHHHHH-----hCCeEEEEecChhHHHHHHHHHHHHhCCCeEEEeCCCC--CCCCCCCCEEEEEcCCCCcHHHHHH
Confidence 3444555553 3378999998877777776665443111 122222111 000000100 011122233
Q ss_pred hhhhhcCCCceEEEEcCCCc
Q 035673 93 INKIKKVKCPVLVIHGTEDD 112 (190)
Q Consensus 93 ~~~~~~~~~P~l~i~g~~D~ 112 (190)
.+.+++..+|++.+.+..+.
T Consensus 95 ~~~ak~~g~~iI~IT~~~~s 114 (179)
T cd05005 95 AEKAKKAGAKVVLITSNPDS 114 (179)
T ss_pred HHHHHHCCCeEEEEECCCCC
Confidence 34566678899998887664
No 378
>PF01339 CheB_methylest: CheB methylesterase; InterPro: IPR000673 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the signal transduction response regulator CheB involved in chemotaxis. CheB methylesterase is responsible for removing the methyl group from the gamma-glutamyl methyl ester residues in the methyl-accepting chemotaxis proteins (MCP). The enzyme catalyses the reaction: protein L-glutamate O-methyl ester and water is converted to protein L-glutamate and methanol. CheB is regulated through phosphorylation by CheA. The N-terminal region of the protein is similar to that of other regulatory components of sensory transduction systems. The Myxococcus xanthus FrzG protein also belongs to this family, and is required for the normal aggregation of cells during fruiting body formation.; GO: 0000156 two-component response regulator activity, 0008984 protein-glutamate methylesterase activity, 0000160 two-component signal transduction system (phosphorelay), 0006935 chemotaxis, 0005737 cytoplasm; PDB: 1CHD_A 1A2O_B 3SFT_A.
Probab=20.61 E-value=1e+02 Score=21.04 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=14.3
Q ss_pred EEEEEEccChHHHHHHHhh
Q 035673 40 LILYGQSVGSGPTLHLASK 58 (190)
Q Consensus 40 ~~l~G~S~Gg~~a~~~a~~ 58 (190)
++++|-|.||.-++.-...
T Consensus 1 vV~IGaSaGG~~al~~il~ 19 (182)
T PF01339_consen 1 VVAIGASAGGPEALQEILS 19 (182)
T ss_dssp EEEEEE-TTHHHHHCCCHC
T ss_pred CEEEEeCCCCHHHHHHHHH
Confidence 5789999999998875543
No 379
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl). E. coli glyoxylate carboligase, plays a key role in glyoxylate metabolism where it catalyzes the condensation of two molecules of glyoxylate to give tartronic semialdehyde and carbon dioxide. This enzyme requires TPP, magnesium ion and FAD as cofactors.
Probab=20.52 E-value=1.1e+02 Score=21.02 Aligned_cols=20 Identities=5% Similarity=-0.056 Sum_probs=13.8
Q ss_pred hhhcCCCceEEEEcCCCcee
Q 035673 95 KIKKVKCPVLVIHGTEDDVV 114 (190)
Q Consensus 95 ~~~~~~~P~l~i~g~~D~~v 114 (190)
.+.+.+.|++++.-.+..+-
T Consensus 96 Ta~~~~lpviivV~NN~~yg 115 (202)
T cd02006 96 VGAQHRIPYIHVLVNNAYLG 115 (202)
T ss_pred HHHHhCCCeEEEEEeCchHH
Confidence 34556788888887777654
No 380
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=20.36 E-value=1.8e+02 Score=18.56 Aligned_cols=29 Identities=7% Similarity=0.244 Sum_probs=16.6
Q ss_pred HHHHHHHHHhCCCCCcEEEEEEccChHHHH
Q 035673 24 AVYQCLQTEYGVSQEDLILYGQSVGSGPTL 53 (190)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 53 (190)
+.+..+.+++++++ ++.++|-|.....+.
T Consensus 122 ~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa 150 (154)
T TIGR01549 122 EIFLAALESLGLPP-EVLHVGDNLNDIEGA 150 (154)
T ss_pred HHHHHHHHHcCCCC-CEEEEeCCHHHHHHH
Confidence 34455555556555 666777666555444
No 381
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=20.21 E-value=2.1e+02 Score=19.24 Aligned_cols=38 Identities=13% Similarity=0.196 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHh-CCCCCcEEEEEEc-cChHHHHHHHhhc
Q 035673 22 IEAVYQCLQTEY-GVSQEDLILYGQS-VGSGPTLHLASKL 59 (190)
Q Consensus 22 ~~~~~~~~~~~~-~~~~~~~~l~G~S-~Gg~~a~~~a~~~ 59 (190)
...+++.+++.. .+...++.|+|-+ |+|..+..++...
T Consensus 28 ~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~ 67 (168)
T cd01080 28 PAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNR 67 (168)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhC
Confidence 445555555553 3567899999998 5666455544443
Done!