BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035677
(168 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6S4P4|RF2B_ORYSJ Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b
PE=1 SV=1
Length = 329
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 35 EAKATAEPE--TEDRELEAKKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQAEVAIM 92
EAK PE ++ ++ K+ +R+LA+RQ + + + ++ YI +LE +V+ LQ E +
Sbjct: 115 EAKKAMTPEQLSDLAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTL 174
Query: 93 SPRIKYADCQNSLLRAENGSMKQKLSAFSGELTFKEAQYEELKRERQILK 142
S ++ + L AEN +K +L A + ++A + LK+E + LK
Sbjct: 175 SAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQELERLK 224
>sp|Q69IL4|RF2A_ORYSJ Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a
PE=1 SV=1
Length = 380
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%)
Query: 49 LEAKKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQAEVAIMSPRIKYADCQNSLLRA 108
++ K+ +R+ A+RQ + + + +++ YI +LE +V+ LQ E +S ++ S L
Sbjct: 180 VDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLALLQRDTSGLTT 239
Query: 109 ENGSMKQKLSAFSGELTFKEAQYEELKRERQILK 142
EN +K +L ++ ++A + LK E Q LK
Sbjct: 240 ENSELKLRLQTMEQQVHLQDALNDTLKSEVQRLK 273
>sp|Q9MA75|VIP1_ARATH Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1
Length = 341
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 49 LEAKKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQAEVAIMSPRIKYADCQNSLLRA 108
L+ K+ +R+LA+RQ + + + +++ Y +LE +V+ LQ E +S ++ S L
Sbjct: 193 LDPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTMLQRGTSELNT 252
Query: 109 ENGSMKQKLSAFSGELTFKEAQYEELKRERQILKQLC 145
EN +K +L A + ++A E L+ E LK +
Sbjct: 253 ENKHLKMRLQALEQQAELRDALNEALRDELNRLKVVA 289
>sp|Q04088|POF21_ARATH Probable transcription factor PosF21 OS=Arabidopsis thaliana
GN=POSF21 PE=2 SV=1
Length = 398
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 30 DDAGKEAK--ATAEPETEDRELEAKKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQA 87
DD+ +AK +A E ++ K+ +R+ A+RQ + + + ++ YI +LE +V+ LQ
Sbjct: 179 DDSAIDAKKSMSATKLAELALIDPKRAKRIWANRQSAARSKERKTRYIFELERKVQTLQT 238
Query: 88 EVAIMSPRIKYADCQNSLLRAENGSMKQKLSAFSGELTFKEAQYEELKRERQILKQLC 145
E +S ++ + L EN +K +L ++ ++ E LK E Q LK L
Sbjct: 239 EATTLSAQLTLLQRDTNGLTVENNELKLRLQTMEQQVHLQDELNEALKEEIQHLKVLT 296
>sp|Q54WN7|BZPF_DICDI Probable basic-leucine zipper transcription factor F
OS=Dictyostelium discoideum GN=bzpF PE=3 SV=1
Length = 631
Score = 37.0 bits (84), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 33 GKEAKATAEPETE-----DRELEAKKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQA 87
G+ T P T+ D E K+ RR++ +R+ +Q +R +Q YI LE +V L
Sbjct: 383 GENGGTTLIPTTDGGFNMDEERHQKRQRRLVKNREAAQLFRQRQKAYIQDLEKKVSDLTG 442
Query: 88 EVAIMSPRIKYADCQNSLLR 107
+ R++ + +N L+R
Sbjct: 443 TNSEFRARVELLNSENKLIR 462
>sp|O24160|TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana
tabacum GN=TGA21 PE=1 SV=1
Length = 456
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 19 LPSSFSRKNT-----GDDAGKEAKAT-AEPETEDRELEAKKLRRVLASRQYSQKYRLKQL 72
+ S SR +T GDD + +A + +++++ L+ K LRR+ +R+ ++K RL++
Sbjct: 129 MADSGSRTDTSTDMDGDDKNQLIEAGQSSDKSKEKVLDQKTLRRLAQNREAARKSRLRKK 188
Query: 73 HYIMQLETEVKALQAEVAIMSPRIKYADCQNSLLRA-------ENGSMKQKLSAFSGELT 125
Y+ QLE R+K + + L RA N + + +G L
Sbjct: 189 AYVQQLENS-------------RLKLSQLEQDLQRARQQGKYISNIADQSNGVGANGPLA 235
Query: 126 FKEAQYEELKRERQILKQLCIMYNQQQEQPKL---VNNLNQRFNKM 168
F L+ + + +L N P+L VNN+ F+++
Sbjct: 236 FDAEYSRWLEEHNKHINELRTAVNAHASDPELRSIVNNVTAHFDEV 281
>sp|P14233|TGA1B_TOBAC TGACG-sequence-specific DNA-binding protein TGA-1B (Fragment)
OS=Nicotiana tabacum GN=TGA1B PE=2 SV=1
Length = 242
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 36/58 (62%)
Query: 52 KKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQAEVAIMSPRIKYADCQNSLLRAE 109
KK R++ +R+ +Q R ++ HY+ +LE +V+ + + + ++ ++ Y +N+ L+ +
Sbjct: 185 KKRARLVRNRESAQLSRQRKKHYVEELEDKVRIMHSTIQDLNAKVAYIIAENATLKTQ 242
>sp|O24646|HY5_ARATH Transcription factor HY5 OS=Arabidopsis thaliana GN=HY5 PE=1 SV=1
Length = 168
Score = 33.5 bits (75), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 48 ELEAKKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQAEVAIMSPRIKYADCQNSLLR 107
E E K+L+R+L +R +Q+ R ++ Y+ +LE VK L+ + + + R+ +N +LR
Sbjct: 86 EKENKRLKRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQNENQMLR 145
>sp|Q1AW41|RNY_RUBXD Ribonuclease Y OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129) GN=rny PE=3 SV=1
Length = 514
Score = 32.7 bits (73), Expect = 0.98, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 35 EAKATAEPETEDRELEAKKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQAEVAIMSP 94
E +A A ED +A+ LRR R+K + E EV+A +AE++ +
Sbjct: 35 ETRADARSIIEDANRQAETLRREAELAAKEAAMRIKD-----EAEAEVRARRAEISRIEE 89
Query: 95 RIKYADCQNSLLRAENGSMKQKLSAFSGELTFKEAQYEELKRERQILKQL 144
R+ D E +++LS EL +E E RE++ L+ L
Sbjct: 90 RLDNRDTALDRREVELDERRRRLSETEDELRRREESLAE--REQEQLRAL 137
>sp|Q55E93|BZPE_DICDI Probable basic-leucine zipper transcription factor E
OS=Dictyostelium discoideum GN=bzpE PE=3 SV=1
Length = 418
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%)
Query: 52 KKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQAEVAIMSPRIKYADCQNSLLR 107
+K RR+L +R+ +Q +R +Q YI LE++ +L+A ++ + +N L++
Sbjct: 248 RKNRRLLKNREAAQLFRQRQKEYINSLESKASSLEASNTTALSKVSHLTEENQLMK 303
>sp|Q9FUD3|BZIP9_ARATH Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1
Length = 277
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 21 SSFSRKNTGDDAGKEAKATAEPETEDRELEAKKLRRVLASRQYSQKYRLKQLHYIMQLET 80
+S S DD E +A T D + K++RR+ ++R+ +++ R ++ Y++ LET
Sbjct: 92 TSGSSHVNSDDEDAETEAGQSEMTNDPN-DLKRIRRMNSNRESAKRSRRRKQEYLVDLET 150
Query: 81 EVKALQAEVAIM 92
+V +L+ + + +
Sbjct: 151 QVDSLKGDNSTL 162
>sp|Q39140|TGA6_ARATH Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1
SV=2
Length = 330
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 15 PPIPLPSSFSRKNTGDDAGK-EAKATAEPETEDRELEAKKLRRVLASRQYSQKYRLKQLH 73
+ ++ G D G A A+ + +L+ K LRR+ +R+ ++K RL++
Sbjct: 8 TDVSTDGDTDHRDLGSDRGHMHAAASDSSDRSKDKLDQKTLRRLAQNREAARKSRLRKKA 67
Query: 74 YIMQLE 79
Y+ QLE
Sbjct: 68 YVQQLE 73
>sp|Q8IUD2|RB6I2_HUMAN ELKS/Rab6-interacting/CAST family member 1 OS=Homo sapiens GN=ERC1
PE=1 SV=1
Length = 1116
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 78 LETEVKALQAEVAIMSPRIKYADCQNSLLRAENGSMKQKLSAFSGELTFKEAQYEELKR 136
LE E++ L++ A+ + + Q + R+ + MK K+ EL+ KEAQ+EELK+
Sbjct: 401 LEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKEAQWEELKK 459
>sp|A0JMK8|BICR2_DANRE Bicaudal D-related protein 2 OS=Danio rerio GN=ccdc64b PE=2 SV=1
Length = 414
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 75 IMQLETEVKALQAEVAIMSPRIKYADCQNSLLRAENGSMKQKLSAFSGELTFKEAQYEEL 134
IMQ+E+E++A+Q E ++ R++ D + S AE ++ +SA +L K Q +
Sbjct: 48 IMQMESEMEAMQQEKHMVQRRLEVRDLEASQREAE---LQADISALRAQLEQKHIQGRDR 104
Query: 135 KRERQILKQLCIMYNQQQEQPKLVNNL 161
+RE +QL + N Q KLV L
Sbjct: 105 RREES--EQLIQLSNHNQ---KLVEQL 126
>sp|Q9SX27|PAN_ARATH Transcription factor PERIANTHIA OS=Arabidopsis thaliana GN=PAN PE=1
SV=1
Length = 452
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 52 KKLRRVLASRQYSQKYRLKQLHYIMQLETEVKALQAEVAIMSPRIKYADCQNSLLRAENG 111
+ LRR+ +R+ ++K RL++ Y+ QLE + +A + +K A Q SL+
Sbjct: 166 RTLRRLAQNREAARKSRLRKKAYVQQLENS----RIRLAQLEEELKRARQQGSLVERGVS 221
Query: 112 SMKQKLSAFSGELTFKEAQYEELKRERQ 139
+ L+A +G +F E +Y K E Q
Sbjct: 222 ADHTHLAAGNGVFSF-ELEYTRWKEEHQ 248
>sp|P43273|TGA2_ARATH Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1
SV=1
Length = 330
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 31 DAGKEAKA--TAEPETEDR---ELEAKKLRRVLASRQYSQKYRLKQLHYIMQLE 79
D G E TA ++ DR +++ K LRR+ +R+ ++K RL++ Y+ QLE
Sbjct: 20 DLGSEGALVNTAASDSSDRSKGKMDQKTLRRLAQNREAARKSRLRKKAYVQQLE 73
>sp|A0PJT0|RIPL1_DANRE RILP-like protein 1 OS=Danio rerio GN=rilpl1 PE=2 SV=2
Length = 406
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 101 CQNSLLRAENGSMKQKLSAFSGELTFKEAQYEE--LKRERQILKQLCIMYNQQQEQ 154
CQ S L+ EN ++ LS LT ++ Q +E +RERQ++K+L + ++Q+++
Sbjct: 116 CQISQLQEENKTLLNNLSIRESPLTEEDIQKQEGMTERERQVMKKLKEVVDKQRDE 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,980,933
Number of Sequences: 539616
Number of extensions: 2191107
Number of successful extensions: 8325
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 258
Number of HSP's that attempted gapping in prelim test: 8090
Number of HSP's gapped (non-prelim): 497
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)