BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035678
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XUW5|HS232_ORYSJ 23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP23.2 PE=2 SV=2
Length = 215
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 24/105 (22%)
Query: 1 MHSVFWEE--DENTVLFKLPLASGTKQEGVKVAIEDHKLF----------ISEEAGTSLN 48
M V W E D + V+ +P G ++E ++V +ED+++ +E+ G +
Sbjct: 75 MARVDWRETGDAHEVVVDVP---GMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDH 131
Query: 49 QY--------FGMYVNLPVGLNPDSFETSMDQTGLLTVRFKKLMP 85
+ F + LP + DS S+D G+LTVRF+KL P
Sbjct: 132 WHREERSYGRFWRQLRLPDNADLDSIAASLD-NGVLTVRFRKLAP 175
>sp|P29779|OV252_ONCVO Small heat shock protein OV25-2 (Fragment) OS=Onchocerca volvulus
GN=OV25-2 PE=2 SV=1
Length = 166
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 132 DLVVGVVDRQFLIIGQQLNEKKEGGS-------CESFVLPHGVNPDGFETSMDDPGVLTV 184
+L V V DR+ +I G G +VLP V PD E+ + D GVLT+
Sbjct: 70 ELSVSVRDRELVIEGHHEERTDPAGHGSIERHFIRKYVLPEEVQPDTIESHLSDKGVLTI 129
Query: 185 TFKK 188
+ K
Sbjct: 130 SANK 133
>sp|P29778|OV251_ONCVO Small heat shock protein OV25-1 OS=Onchocerca volvulus GN=OV25-1
PE=2 SV=1
Length = 174
Score = 37.4 bits (85), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 131 EDLVVGVVDRQFLIIGQQLNEKKEGGS-------CESFVLPHGVNPDGFETSMDDPGVLT 183
++L V V DR+ +I G G +VLP V PD E+ + D GVLT
Sbjct: 81 KELSVSVRDRELVIEGHHKERADSAGHGSIERHFIRKYVLPEEVQPDTIESHLSDKGVLT 140
Query: 184 VTFKK 188
+ K
Sbjct: 141 ICANK 145
>sp|P12811|HS22C_CHLRE Heat shock 22 kDa protein, chloroplastic OS=Chlamydomonas
reinhardtii PE=2 SV=1
Length = 157
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 158 CESFVLPHGVNPDGFETSMDDPGVLTVTFKKK--PSKDGKKK 197
+F LP NPDG +MD GVL VT K+ P+K K+
Sbjct: 111 SRAFSLPENANPDGITAAMDK-GVLVVTVPKREPPAKPEPKR 151
>sp|P02517|HSP26_DROME Heat shock protein 26 OS=Drosophila melanogaster GN=Hsp26 PE=1 SV=2
Length = 208
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 126 AETKKEDLVVGVVDRQFLIIGQQLNEKKEGGSC-ESFVLPHGVNPDGFE-----TSMDDP 179
A+ K +L V VVD L+ G+ + + G FV + V PDG++ + +
Sbjct: 96 AQFKPSELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKV-PDGYKAEQVVSQLSSD 154
Query: 180 GVLTVTFKKKPSKDGKKKKEKILKSRLLG 208
GVLTV+ KP K KE+I++ + +G
Sbjct: 155 GVLTVSI-PKPQAVEDKSKERIIQIQQVG 182
>sp|Q943Q3|HS166_ORYSJ 16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP16.6 PE=2 SV=1
Length = 150
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 124 LSAETKKEDLVVGVVDRQFLIIGQQLNEKKEGGSCESFVLPHGVNPDGFETSMDDPGVLT 183
+S E +E+ V G D ++ + E+ G F LP G D SMD+ GVLT
Sbjct: 77 ISGERAREEDVDGKNDERWHHV-----ERSSGKFQRRFRLPRGARVDQVSASMDN-GVLT 130
Query: 184 VTFKKKPSK 192
VT K+ +K
Sbjct: 131 VTVPKEETK 139
>sp|P02516|HSP23_DROME Heat shock protein 23 OS=Drosophila melanogaster GN=Hsp23 PE=2 SV=2
Length = 186
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 129 KKEDLVVGVVDRQFLIIGQQLNEKKEGGS-----CESFVLPHGVNPDGFETSMDDPGVLT 183
K +LVV V D L+ G + + G + LP G D +++ GVLT
Sbjct: 81 KPSELVVKVQDNSVLVEGNHEEREDDHGFITRHFVRRYALPPGYEADKVASTLSSDGVLT 140
Query: 184 VTFKKKPSKDGKKKKEKILKSRLLGGLAEACLLAGCKFACDELTGDD 230
+ K P+ + K E+I++ + +G A + K A ++ G+D
Sbjct: 141 IKVPKPPAIED-KGNERIVQIQQVGP-AHLNVKENPKEAVEQDNGND 185
>sp|Q9XIE3|HS17A_ARATH 17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana
GN=HSP17.6A PE=1 SV=1
Length = 155
Score = 31.2 bits (69), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 17/86 (19%)
Query: 129 KKEDLVVGVVDRQFL-IIGQQLNEKKE------------GGSCESFVLPHGVNPDGFETS 175
KKE++ V + D L I G++ EK+E GG F LP V D + S
Sbjct: 67 KKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKAS 126
Query: 176 MDDPGVLTVTFKKKPSKDGKKKKEKI 201
M++ GVLTVT P + KKK ++
Sbjct: 127 MEN-GVLTVTV---PKVETNKKKAQV 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,009,482
Number of Sequences: 539616
Number of extensions: 3959962
Number of successful extensions: 6948
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 6936
Number of HSP's gapped (non-prelim): 31
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)