RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 035678
         (231 letters)



>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon
           Methanococcus jannaschii [TaxId: 2190]}
          Length = 115

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 16/86 (18%)

Query: 129 KKEDLVVGVVDRQFLIIGQQLNEKKE-------------GGSCESFVLPHGVNPDGFETS 175
            KED+++  V     I  ++                        +  LP  V  +     
Sbjct: 32  NKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAK 91

Query: 176 MDDPGVLTVTFKKKPSKDGKKKKEKI 201
            ++ GVL+V   K  S    KK   I
Sbjct: 92  FEN-GVLSVILPKAESS--IKKGINI 114


>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum
           aestivum) [TaxId: 4565]}
          Length = 150

 Score = 36.3 bits (83), Expect = 0.001
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 160 SFVLPHGVNPDGFETSMDDPGVLTVTFKKKPSKDGKKKKEKI 201
            F L      +  +  +++ GVLTVT  K   K  + K  +I
Sbjct: 108 RFRLLEDAKVEEVKAGLEN-GVLTVTVPKAEVKKPEVKAIQI 148


>d1rvga_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase)
           {Thermus aquaticus [TaxId: 271]}
          Length = 305

 Score = 26.2 bits (57), Expect = 4.0
 Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 15/148 (10%)

Query: 2   HSVFWEEDENT---VLFKLPLASGTKQE-GVKVAIEDHKLFISEEAGTSLNQYFGMYVNL 57
           H  F      T   V     +    + E G    IE+H     ++A  +  +   +++  
Sbjct: 105 HEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMER 164

Query: 58  PVGLNPDSFETSMDQ-------TGLLTVRFKKLMPINSKLSCSTVKSSCDMAPMGWLEPD 110
                 D    ++          G   +   +L  I   +    V       P   +E  
Sbjct: 165 ---TGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVE-R 220

Query: 111 DKEANGVIHSKAGLSAETKKEDLVVGVV 138
            + + G I   AG+  E  K+ + +G+ 
Sbjct: 221 FRASGGEIGEAAGIHPEDIKKAISLGIA 248


>d1bvoa_ b.2.5.3 (A:) Dorsal homologue Gambif1 {African malaria
           mosquito (Anopheles gambiae) [TaxId: 7165]}
          Length = 175

 Score = 25.6 bits (56), Expect = 4.6
 Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 157 SCESFVLPHGVNPDGFETSMDDPGVLTVTFKKKPSKDGKKKKEKI 201
            C+  V    +N      + ++ G+  V  KKK  ++  + +++I
Sbjct: 78  GCKKGVCTVEINSTTMSYTFNNLGIQCV--KKKDVEEALRLRQEI 120


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.314    0.134    0.389 

Gapped
Lambda     K      H
   0.267   0.0647    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 843,775
Number of extensions: 37231
Number of successful extensions: 56
Number of sequences better than 10.0: 1
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 7
Length of query: 231
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 149
Effective length of database: 1,281,736
Effective search space: 190978664
Effective search space used: 190978664
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 51 (23.6 bits)