Query 035679
Match_columns 113
No_of_seqs 139 out of 204
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 08:30:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035679.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035679hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2h9ec1 g.22.1.1 (C:6-83) Anti 62.6 0.45 3.3E-05 29.3 -1.0 52 54-106 9-74 (78)
2 d1jv2b5 g.3.11.6 (B:563-605) I 57.3 1.7 0.00012 24.9 0.9 19 80-98 21-40 (43)
3 d1xu2r_ g.24.1.2 (R:) Tumor ne 46.5 3.8 0.00028 22.6 1.3 19 59-77 17-35 (36)
4 d1hx2a_ g.22.1.2 (A:) BSTI {Fi 31.6 0.93 6.8E-05 26.7 -3.3 35 54-92 12-46 (60)
5 d2aepa1 b.68.1.1 (A:83-469) In 27.1 6 0.00043 31.5 -0.1 18 86-103 185-202 (387)
6 d1f8ea_ b.68.1.1 (A:) Influenz 24.3 7.2 0.00053 31.0 -0.1 17 87-103 188-204 (388)
7 d2c7na1 g.39.1.15 (A:18-73) Ra 20.7 7.7 0.00056 23.2 -0.5 16 89-104 7-26 (56)
8 d1ccva_ g.22.1.1 (A:) Chymotry 19.4 0.62 4.5E-05 27.1 -5.8 39 54-97 11-50 (56)
9 d2heyr3 g.24.1.1 (R:29-82) Tum 16.8 8.3 0.0006 22.1 -1.0 25 77-104 12-44 (54)
10 d1kloa3 g.3.11.2 (A:122-172) L 16.2 19 0.0014 19.9 0.5 21 83-103 1-28 (51)
No 1
>d2h9ec1 g.22.1.1 (C:6-83) Anticoagulant protein {Dog hookworm (Ancylostoma caninum) [TaxId: 29170]}
Probab=62.62 E-value=0.45 Score=29.26 Aligned_cols=52 Identities=19% Similarity=0.402 Sum_probs=23.6
Q ss_pred CChH-HhhHHhhcCCCCchHHHHHhH------hcCcccccCCCCCCCCC-------CCCCccccccc
Q 035679 54 DCDG-ACAARCQLSSRPRLCKRACGT------CCARCDCVPPGTSGNYD-------ACPCYANMTTH 106 (113)
Q Consensus 54 ~C~~-~C~~RCs~~~~~~~C~~~C~~------CC~~C~CVP~Gt~gnk~-------~CpCY~~~~t~ 106 (113)
+|++ .|...|+.-.....|...++. |=.-|.| |+|++-|.+ +|||+.+=++.
T Consensus 9 ~C~~~~C~~tC~~~~~~~~c~~~~~~~c~~~~CveGC~C-p~G~v~~~~g~CV~~~~CpC~~~g~~Y 74 (78)
T d2h9ec1 9 SCGSKECDKKCKYDGVEEEDDEEPNVPCLVRVCHQDCVC-EEGFYRNKDDKCVSAEDCELDNMDFIY 74 (78)
T ss_dssp -------CCBCCCTTCC-------------------CEE-CSSCEECTTCCEECHHHHGGGGEEEEC
T ss_pred ccCCCcCccccCCCcccccccccCCccccCCCCCCcCCC-CCCeeEcCCCCEEChhhCCcccCCEEc
Confidence 6775 588888766655556555543 3356778 899987654 57898665544
No 2
>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.32 E-value=1.7 Score=24.87 Aligned_cols=19 Identities=42% Similarity=1.347 Sum_probs=14.9
Q ss_pred cCcccccCCCCCCCC-CCCC
Q 035679 80 CARCDCVPPGTSGNY-DACP 98 (113)
Q Consensus 80 C~~C~CVP~Gt~gnk-~~Cp 98 (113)
|++|.|--||.+|.. |+||
T Consensus 21 cG~C~C~~~gy~G~~Ce~Cp 40 (43)
T d1jv2b5 21 CGSCVCIQPGSYGDTCEKCP 40 (43)
T ss_dssp TTEEEECCSSCBSTTSCBCT
T ss_pred CCEeEeCCCCccCCccccCC
Confidence 789999878988865 5565
No 3
>d1xu2r_ g.24.1.2 (R:) Tumor necrosis factor receptor superfamily member 17, BCMA {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.54 E-value=3.8 Score=22.62 Aligned_cols=19 Identities=37% Similarity=1.006 Sum_probs=17.3
Q ss_pred hhHHhhcCCCCchHHHHHh
Q 035679 59 CAARCQLSSRPRLCKRACG 77 (113)
Q Consensus 59 C~~RCs~~~~~~~C~~~C~ 77 (113)
|.-|||..+-+-.|.+||+
T Consensus 17 c~lrcs~~~ppl~cq~yc~ 35 (36)
T d1xu2r_ 17 CQLRCSSNTPPLTCQRYCN 35 (36)
T ss_dssp GGGTTTSSSCCGGGHHHHH
T ss_pred ceeecCCCCCchhhhhhcc
Confidence 8889999899999999996
No 4
>d1hx2a_ g.22.1.2 (A:) BSTI {Fire-bellied toad (Bombina bombina) [TaxId: 8345]}
Probab=31.56 E-value=0.93 Score=26.72 Aligned_cols=35 Identities=31% Similarity=0.897 Sum_probs=25.9
Q ss_pred CChHHhhHHhhcCCCCchHHHHHhHhcCcccccCCCCCC
Q 035679 54 DCDGACAARCQLSSRPRLCKRACGTCCARCDCVPPGTSG 92 (113)
Q Consensus 54 ~C~~~C~~RCs~~~~~~~C~~~C~~CC~~C~CVP~Gt~g 92 (113)
.|+++|..-|+.-.....|.+.|- .-|.| |+|+.=
T Consensus 12 ~C~s~Cp~tC~~~~~~~~C~~~C~---eGC~C-p~G~vl 46 (60)
T d1hx2a_ 12 TCASSCPKTCETRNKLVLCDKKCN---QRCGC-ISGTVL 46 (60)
T ss_dssp SSCCSSCCCTTTCCCSSSCSSCCC---SEEEE-CTTCEE
T ss_pred cccCCCccccCCCCCCCCCCCCCC---ccCCC-CCCEeE
Confidence 699999999987666666766443 55777 888864
No 5
>d2aepa1 b.68.1.1 (A:83-469) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]}
Probab=27.06 E-value=6 Score=31.47 Aligned_cols=18 Identities=22% Similarity=0.720 Sum_probs=15.2
Q ss_pred cCCCCCCCCCCCCCcccc
Q 035679 86 VPPGTSGNYDACPCYANM 103 (113)
Q Consensus 86 VP~Gt~gnk~~CpCY~~~ 103 (113)
.++|+.++.|||.||.+.
T Consensus 185 ~l~g~~~HiEECSCYp~~ 202 (387)
T d2aepa1 185 PLSGSAQHVEECSCYPRY 202 (387)
T ss_dssp ECCSSCCCCEEEEEEEET
T ss_pred ecCCCcCceEeeeecCCC
Confidence 367899999999999765
No 6
>d1f8ea_ b.68.1.1 (A:) Influenza neuraminidase {Influenza A virus, different strains [TaxId: 11320]}
Probab=24.25 E-value=7.2 Score=30.98 Aligned_cols=17 Identities=29% Similarity=0.808 Sum_probs=14.3
Q ss_pred CCCCCCCCCCCCCcccc
Q 035679 87 PPGTSGNYDACPCYANM 103 (113)
Q Consensus 87 P~Gt~gnk~~CpCY~~~ 103 (113)
++|+.++.|||.||.+.
T Consensus 188 l~g~~~HiEECSCYp~~ 204 (388)
T d1f8ea_ 188 LAGTAKHIEECSCYGER 204 (388)
T ss_dssp CCSSCCCCEEEEEEEET
T ss_pred cCCCcCceEeeeecCCC
Confidence 57889999999999764
No 7
>d2c7na1 g.39.1.15 (A:18-73) RabGEF1 (Rabex-5), ubiquitin-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.71 E-value=7.7 Score=23.21 Aligned_cols=16 Identities=31% Similarity=0.671 Sum_probs=12.0
Q ss_pred CCCCC---CCCC-CCccccc
Q 035679 89 GTSGN---YDAC-PCYANMT 104 (113)
Q Consensus 89 Gt~gn---k~~C-pCY~~~~ 104 (113)
|.||| ...| .||+++.
T Consensus 7 GFyG~~~~~g~CSkCyr~~~ 26 (56)
T d2c7na1 7 GYYGNPAWQGFCSKCWREEY 26 (56)
T ss_dssp SSCCCGGGTTCCHHHHHHHH
T ss_pred CCCCCcccCCcchHHHHHHH
Confidence 67775 5789 6999874
No 8
>d1ccva_ g.22.1.1 (A:) Chymotrypsin inhibitor AMCI {Honeybee (Apis mellifera) [TaxId: 7460]}
Probab=19.41 E-value=0.62 Score=27.13 Aligned_cols=39 Identities=36% Similarity=0.923 Sum_probs=24.9
Q ss_pred CChHHhhHHhhcCCCCchHHHHHhHhcCcccccCCCCCCCCC-CC
Q 035679 54 DCDGACAARCQLSSRPRLCKRACGTCCARCDCVPPGTSGNYD-AC 97 (113)
Q Consensus 54 ~C~~~C~~RCs~~~~~~~C~~~C~~CC~~C~CVP~Gt~gnk~-~C 97 (113)
+|+++|...|+.. ....|.+.|- ..|.| |+|++-|.+ .|
T Consensus 11 ~Cg~~C~~tC~~~-~~~~C~~~C~---~GC~C-~~G~v~~~~g~C 50 (56)
T d1ccva_ 11 TCGSACAPTCAQP-KTRICTMQCR---IGCQC-QEGFLRNGEGAC 50 (56)
T ss_dssp EEECTTCCCSSCS-CCCCSSSSCE---EEEEE-CTTCEEETTTEE
T ss_pred cccCcCccccCcc-CCCcCCCCCC---CCCCC-CCCeeEcCCCCE
Confidence 6899999999753 3344544332 34777 788877643 44
No 9
>d2heyr3 g.24.1.1 (R:29-82) Tumor necrosis factor receptor superfamily member 4, OX40L receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.82 E-value=8.3 Score=22.08 Aligned_cols=25 Identities=32% Similarity=0.999 Sum_probs=15.1
Q ss_pred hHhcCcccccCCCCC-------CCCCCC-CCccccc
Q 035679 77 GTCCARCDCVPPGTS-------GNYDAC-PCYANMT 104 (113)
Q Consensus 77 ~~CC~~C~CVP~Gt~-------gnk~~C-pCY~~~~ 104 (113)
|.||.+| ||||| ...-+| ||-....
T Consensus 12 g~CC~~C---~pG~~~~~~Cs~~~~t~C~pC~~gty 44 (54)
T d2heyr3 12 DRCCHEC---RPGNGMVSRCSRSQNTVCRPCGPGFY 44 (54)
T ss_dssp TEEEECB---CTTEEEEECCCSSCCCEEEECCTTEE
T ss_pred CeECCCC---CCCCeEcCcCCCCCCCeeccCcCCCc
Confidence 4567765 78876 334567 6655543
No 10
>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.16 E-value=19 Score=19.90 Aligned_cols=21 Identities=33% Similarity=0.903 Sum_probs=14.1
Q ss_pred ccccCCCCCCCC-------CCCCCcccc
Q 035679 83 CDCVPPGTSGNY-------DACPCYANM 103 (113)
Q Consensus 83 C~CVP~Gt~gnk-------~~CpCY~~~ 103 (113)
|+|-|.||.++. ..|+|-.+.
T Consensus 1 C~C~~~Gs~~~~~~Cd~~tGqC~Ck~~v 28 (51)
T d1kloa3 1 CACNPYGTVQQQSSCNPVTGQCQCLPHV 28 (51)
T ss_dssp CCCCTTTBGGGCCCCCTTTCCCCBCTTE
T ss_pred CcCCCCcccCCCCccCCCCCeecCCCCC
Confidence 788898887653 366665544
Done!