Query 035691
Match_columns 640
No_of_seqs 679 out of 4524
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 08:40:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035691.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035691hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 3.8E-49 1.3E-53 452.5 30.1 360 3-377 294-754 (768)
2 3rgz_A Protein brassinosteroid 100.0 3E-44 1E-48 412.0 27.6 347 1-364 267-721 (768)
3 4eco_A Uncharacterized protein 100.0 7.1E-43 2.4E-47 391.6 25.1 340 1-363 204-604 (636)
4 3vq2_A TLR4, TOLL-like recepto 100.0 2.1E-42 7.1E-47 387.3 28.0 198 160-363 351-562 (606)
5 2id5_A Lingo-1, leucine rich r 100.0 5.4E-42 1.9E-46 372.4 26.8 329 4-365 33-362 (477)
6 3j0a_A TOLL-like receptor 5; m 100.0 5.6E-42 1.9E-46 397.1 28.5 357 1-364 46-565 (844)
7 3v47_A TOLL-like receptor 5B a 100.0 4.6E-42 1.6E-46 370.8 24.5 345 3-363 30-412 (455)
8 3t6q_A CD180 antigen; protein- 100.0 6.4E-41 2.2E-45 375.2 32.6 323 2-331 56-438 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 2.1E-41 7.1E-46 379.2 27.0 187 153-340 370-567 (606)
10 2z63_A TOLL-like receptor 4, v 100.0 2.4E-41 8.3E-46 375.8 26.6 348 4-363 29-535 (570)
11 3t6q_A CD180 antigen; protein- 100.0 3E-40 1E-44 369.7 31.9 338 3-358 33-437 (606)
12 4eco_A Uncharacterized protein 100.0 5.1E-41 1.7E-45 376.6 23.9 322 14-358 194-578 (636)
13 3v47_A TOLL-like receptor 5B a 100.0 1.8E-40 6E-45 358.4 26.4 334 6-359 13-384 (455)
14 4ecn_A Leucine-rich repeat pro 100.0 6.5E-41 2.2E-45 382.2 23.3 336 4-357 324-787 (876)
15 4ecn_A Leucine-rich repeat pro 100.0 2.1E-40 7.2E-45 378.1 26.4 336 1-360 446-841 (876)
16 4g8a_A TOLL-like receptor 4; l 100.0 7.8E-40 2.7E-44 368.2 29.9 350 3-363 52-584 (635)
17 2z7x_B TOLL-like receptor 1, v 100.0 4.9E-40 1.7E-44 361.1 26.4 340 3-363 21-485 (520)
18 1ziw_A TOLL-like receptor 3; i 100.0 1.5E-39 5.1E-44 369.1 31.2 345 3-363 222-626 (680)
19 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-39 4E-44 361.3 28.2 340 3-363 52-514 (562)
20 2z81_A CD282 antigen, TOLL-lik 100.0 4.3E-40 1.5E-44 364.0 23.8 344 3-362 26-513 (549)
21 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.6E-39 1.6E-43 356.5 30.1 327 5-359 33-486 (562)
22 2id5_A Lingo-1, leucine rich r 100.0 2.9E-39 9.8E-44 351.0 26.1 323 6-363 14-337 (477)
23 1ziw_A TOLL-like receptor 3; i 100.0 8.9E-39 3.1E-43 362.7 31.1 344 3-357 25-441 (680)
24 4g8a_A TOLL-like receptor 4; l 100.0 8.8E-39 3E-43 359.6 27.6 334 1-340 74-589 (635)
25 3o6n_A APL1; leucine-rich repe 100.0 1.3E-38 4.4E-43 336.5 25.4 327 2-363 44-378 (390)
26 3oja_B Anopheles plasmodium-re 100.0 1.7E-38 5.9E-43 353.9 25.5 330 2-366 50-387 (597)
27 2z81_A CD282 antigen, TOLL-lik 100.0 2.3E-38 7.9E-43 350.2 25.0 323 1-335 48-514 (549)
28 4b9d_A Serine/threonine-protei 100.0 8.5E-40 2.9E-44 333.8 11.7 179 441-639 24-204 (350)
29 4fih_A Serine/threonine-protei 100.0 1E-39 3.6E-44 332.6 12.3 177 441-640 74-250 (346)
30 2z63_A TOLL-like receptor 4, v 100.0 4.5E-38 1.6E-42 349.4 26.1 156 5-174 9-164 (570)
31 3j0a_A TOLL-like receptor 5; m 100.0 9.2E-38 3.2E-42 361.7 29.2 277 2-284 23-376 (844)
32 2z7x_B TOLL-like receptor 1, v 100.0 4.3E-38 1.5E-42 345.6 25.0 315 1-336 43-486 (520)
33 4aw0_A HPDK1, 3-phosphoinositi 100.0 9.3E-40 3.2E-44 328.0 10.1 179 441-639 32-213 (311)
34 4fie_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 334.7 13.1 177 441-640 151-327 (423)
35 4aoj_A High affinity nerve gro 100.0 1.3E-38 4.5E-43 325.0 13.6 190 441-640 41-240 (329)
36 1o6v_A Internalin A; bacterial 100.0 8.8E-37 3E-41 330.1 28.6 319 3-360 46-389 (466)
37 4fmz_A Internalin; leucine ric 100.0 1.3E-36 4.4E-41 316.0 27.6 298 2-331 43-346 (347)
38 4asz_A BDNF/NT-3 growth factor 100.0 5.5E-39 1.9E-43 323.3 9.2 190 441-640 13-210 (299)
39 4g31_A Eukaryotic translation 100.0 3E-38 1E-42 318.4 13.7 189 442-640 6-210 (299)
40 3fpq_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 314.6 14.2 177 444-639 29-208 (290)
41 3hyh_A Carbon catabolite-derep 100.0 5.3E-38 1.8E-42 311.0 13.9 174 441-638 13-189 (275)
42 4g3f_A NF-kappa-beta-inducing 100.0 2E-38 6.8E-43 322.2 10.9 178 440-640 57-236 (336)
43 2ft3_A Biglycan; proteoglycan, 100.0 2.6E-36 8.8E-41 311.6 26.5 290 4-329 34-331 (332)
44 1xku_A Decorin; proteoglycan, 100.0 5.8E-36 2E-40 308.8 29.1 291 4-329 32-330 (330)
45 4gt4_A Tyrosine-protein kinase 100.0 4.2E-38 1.4E-42 318.2 12.2 189 442-640 27-227 (308)
46 3o6n_A APL1; leucine-rich repe 100.0 1.4E-36 4.6E-41 321.1 23.4 308 25-363 43-356 (390)
47 3omv_A RAF proto-oncogene seri 100.0 1E-37 3.4E-42 314.1 13.6 174 439-635 34-209 (307)
48 3bz5_A Internalin-J, INLJ; leu 100.0 3.8E-35 1.3E-39 315.1 30.5 290 2-332 41-353 (457)
49 3ubd_A Ribosomal protein S6 ki 100.0 2.4E-38 8.2E-43 317.8 4.7 177 441-639 24-205 (304)
50 1o6v_A Internalin A; bacterial 100.0 2.9E-35 9.9E-40 318.2 28.6 314 12-358 33-365 (466)
51 3oja_B Anopheles plasmodium-re 100.0 5.2E-36 1.8E-40 334.0 23.3 308 25-363 49-362 (597)
52 1ogq_A PGIP-2, polygalacturona 100.0 1.1E-36 3.9E-41 311.2 15.7 255 81-364 50-309 (313)
53 3hmm_A TGF-beta receptor type- 100.0 6.6E-37 2.3E-41 310.2 12.0 179 442-635 4-187 (303)
54 4ase_A Vascular endothelial gr 100.0 6.9E-37 2.4E-41 314.8 10.2 201 431-640 54-267 (353)
55 4b99_A Mitogen-activated prote 100.0 6.8E-36 2.3E-40 312.9 16.2 184 440-637 53-239 (398)
56 4fmz_A Internalin; leucine ric 100.0 2.4E-34 8E-39 298.9 26.8 300 22-357 39-344 (347)
57 1xku_A Decorin; proteoglycan, 100.0 4.9E-34 1.7E-38 294.3 27.5 268 3-305 52-330 (330)
58 3bz5_A Internalin-J, INLJ; leu 100.0 6.2E-34 2.1E-38 305.7 28.2 286 1-331 62-368 (457)
59 2ft3_A Biglycan; proteoglycan, 100.0 3.4E-34 1.2E-38 295.7 24.6 267 3-305 54-331 (332)
60 1jl5_A Outer protein YOPM; leu 100.0 8.3E-34 2.8E-38 304.5 27.2 313 2-359 10-370 (454)
61 1ogq_A PGIP-2, polygalacturona 100.0 3.1E-35 1.1E-39 300.6 14.3 251 51-332 50-305 (313)
62 1jl5_A Outer protein YOPM; leu 100.0 1.4E-32 4.9E-37 294.9 30.6 300 3-359 91-409 (454)
63 3v5w_A G-protein coupled recep 100.0 1.4E-34 4.7E-39 315.5 12.7 175 441-639 189-370 (689)
64 2z66_A Variable lymphocyte rec 100.0 1E-33 3.6E-38 288.6 18.3 260 81-365 28-293 (306)
65 4f9c_A Cell division cycle 7-r 100.0 5.6E-34 1.9E-38 295.2 13.8 179 437-638 17-225 (361)
66 3uto_A Twitchin; kinase, muscl 100.0 8.3E-34 2.9E-38 311.7 14.4 177 441-639 157-335 (573)
67 3zyj_A Leucine-rich repeat-con 100.0 4.8E-32 1.7E-36 290.7 27.0 255 52-339 44-300 (440)
68 3zyi_A Leucine-rich repeat-con 100.0 6E-32 2.1E-36 291.1 26.5 253 52-337 55-309 (452)
69 2z80_A TOLL-like receptor 2, v 100.0 6.2E-33 2.1E-37 288.8 17.5 277 29-335 33-318 (353)
70 2z80_A TOLL-like receptor 2, v 100.0 5.4E-33 1.8E-37 289.3 12.7 280 5-311 33-318 (353)
71 3zyj_A Leucine-rich repeat-con 100.0 3.6E-31 1.2E-35 283.9 25.8 248 28-308 44-293 (440)
72 2z66_A Variable lymphocyte rec 100.0 5.9E-32 2E-36 275.7 18.3 272 31-333 11-289 (306)
73 3zyi_A Leucine-rich repeat-con 100.0 4.4E-31 1.5E-35 284.3 25.6 248 28-308 55-304 (452)
74 3oja_A Leucine-rich immune mol 100.0 3.4E-33 1.2E-37 302.6 6.5 246 80-363 33-286 (487)
75 1ozn_A Reticulon 4 receptor; N 100.0 7.9E-31 2.7E-35 264.4 20.3 252 54-364 14-266 (285)
76 4aw2_A Serine/threonine-protei 100.0 2E-32 6.9E-37 291.2 8.9 182 432-633 65-249 (437)
77 1z7x_W Ribonuclease inhibitor; 100.0 1E-34 3.5E-39 313.7 -10.1 348 2-357 2-409 (461)
78 1z7x_W Ribonuclease inhibitor; 100.0 5.7E-34 1.9E-38 307.9 -4.4 328 2-333 27-413 (461)
79 1ozn_A Reticulon 4 receptor; N 100.0 6.7E-31 2.3E-35 264.9 18.0 253 30-314 14-268 (285)
80 1o6l_A RAC-beta serine/threoni 100.0 3.1E-31 1E-35 273.3 14.7 178 441-640 5-185 (337)
81 4fcg_A Uncharacterized protein 100.0 1.8E-30 6.2E-35 266.8 19.8 236 51-333 81-316 (328)
82 4fcg_A Uncharacterized protein 100.0 3.4E-30 1.2E-34 264.8 20.9 227 27-285 81-316 (328)
83 3g06_A SSPH2 (leucine-rich rep 100.0 4.3E-29 1.5E-33 276.0 31.0 257 4-331 41-297 (622)
84 3s95_A LIMK-1, LIM domain kina 100.0 5.6E-31 1.9E-35 268.9 14.6 183 440-639 9-201 (310)
85 3fxz_A Serine/threonine-protei 100.0 5.1E-31 1.7E-35 267.4 14.0 177 440-639 19-195 (297)
86 3fe3_A MAP/microtubule affinit 100.0 7.3E-31 2.5E-35 269.7 14.1 177 439-638 13-191 (328)
87 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.2E-31 1.1E-35 274.9 10.7 179 439-639 21-203 (353)
88 1xjd_A Protein kinase C, theta 100.0 9.4E-31 3.2E-35 270.4 13.8 181 437-639 13-197 (345)
89 4dc2_A Protein kinase C IOTA t 100.0 5.9E-31 2E-35 276.2 12.4 178 440-639 51-232 (396)
90 3v8s_A RHO-associated protein 100.0 2.8E-31 9.7E-36 280.2 9.9 182 433-636 61-245 (410)
91 3o53_A Protein LRIM1, AGAP0063 100.0 1.5E-31 5E-36 274.0 7.1 257 5-326 12-270 (317)
92 1fot_A TPK1 delta, CAMP-depend 100.0 1.5E-30 5E-35 266.2 14.4 175 441-640 6-183 (318)
93 2c30_A Serine/threonine-protei 100.0 2.3E-30 7.7E-35 265.6 15.8 188 429-639 23-220 (321)
94 2vd5_A DMPK protein; serine/th 100.0 4.4E-31 1.5E-35 278.9 10.5 183 431-633 51-236 (412)
95 3zgw_A Maternal embryonic leuc 100.0 5.5E-31 1.9E-35 272.2 10.3 179 438-637 7-186 (347)
96 3a8x_A Protein kinase C IOTA t 100.0 1.7E-30 5.7E-35 269.0 13.9 177 441-639 9-189 (345)
97 2qkw_B Protein kinase; three-h 100.0 2E-30 6.7E-35 266.3 14.2 193 430-639 28-220 (321)
98 4fr4_A YANK1, serine/threonine 100.0 3.1E-30 1.1E-34 269.8 15.6 171 441-634 15-188 (384)
99 2yab_A Death-associated protei 100.0 3.3E-30 1.1E-34 268.1 15.6 177 440-639 11-197 (361)
100 3qd2_B Eukaryotic translation 100.0 2.4E-30 8.1E-35 266.7 14.4 189 441-639 6-255 (332)
101 2i0e_A Protein kinase C-beta I 100.0 1.5E-30 5.2E-35 269.7 12.5 179 439-639 18-200 (353)
102 1wwl_A Monocyte differentiatio 100.0 3.9E-31 1.3E-35 270.2 6.7 250 23-308 39-310 (312)
103 1wwl_A Monocyte differentiatio 100.0 2.6E-31 8.8E-36 271.5 5.3 247 47-331 39-309 (312)
104 3o53_A Protein LRIM1, AGAP0063 100.0 5.9E-31 2E-35 269.5 8.0 261 53-357 12-273 (317)
105 4eqm_A Protein kinase; transfe 100.0 2.7E-30 9.4E-35 261.6 12.7 180 440-640 10-192 (294)
106 3rp9_A Mitogen-activated prote 100.0 6.8E-30 2.3E-34 275.5 15.6 186 440-639 52-263 (458)
107 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.3E-30 1.1E-34 267.2 12.2 174 441-639 41-217 (350)
108 1tki_A Titin; serine kinase, m 100.0 6.5E-30 2.2E-34 262.1 14.2 177 440-639 4-182 (321)
109 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-29 7.8E-34 255.4 17.4 176 440-636 12-213 (298)
110 2acx_A G protein-coupled recep 100.0 6.2E-30 2.1E-34 278.6 13.6 179 440-639 183-364 (576)
111 3uim_A Brassinosteroid insensi 100.0 3.8E-30 1.3E-34 264.7 11.0 199 426-639 15-214 (326)
112 2bdw_A Hypothetical protein K1 100.0 1.3E-29 4.3E-34 264.3 14.8 177 440-639 28-209 (362)
113 3soa_A Calcium/calmodulin-depe 100.0 8.7E-30 3E-34 271.9 13.8 178 440-639 10-192 (444)
114 2r5t_A Serine/threonine-protei 100.0 3.1E-30 1.1E-34 269.2 10.1 177 441-639 38-218 (373)
115 3tki_A Serine/threonine-protei 100.0 1E-29 3.5E-34 260.9 13.6 178 440-637 6-184 (323)
116 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-29 3.9E-34 275.8 14.5 181 441-639 185-368 (543)
117 1kob_A Twitchin; kinase, intra 100.0 1.5E-29 5.2E-34 265.4 15.0 178 440-639 50-229 (387)
118 2y0a_A Death-associated protei 100.0 2.5E-29 8.6E-34 258.4 16.2 176 441-639 11-196 (326)
119 3c0i_A Peripheral plasma membr 100.0 7.9E-30 2.7E-34 264.9 12.3 181 441-639 24-212 (351)
120 3kul_A Ephrin type-A receptor 100.0 5.8E-30 2E-34 263.1 11.2 181 441-639 49-233 (325)
121 3ugc_A Tyrosine-protein kinase 100.0 2.6E-30 9E-35 261.9 8.1 184 440-639 9-196 (295)
122 3o0g_A Cell division protein k 100.0 1.9E-29 6.4E-34 255.3 14.1 177 441-639 2-181 (292)
123 3q4u_A Activin receptor type-1 100.0 1E-29 3.4E-34 258.4 12.1 176 440-635 7-192 (301)
124 3p86_A Serine/threonine-protei 100.0 6.4E-30 2.2E-34 260.7 10.6 185 435-640 31-219 (309)
125 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.1E-29 3.9E-34 265.4 12.5 185 437-639 61-264 (365)
126 3a62_A Ribosomal protein S6 ki 100.0 9E-30 3.1E-34 261.9 11.4 178 440-639 16-200 (327)
127 3g33_A Cell division protein k 100.0 4.1E-29 1.4E-33 254.9 15.9 185 439-640 7-199 (308)
128 3ork_A Serine/threonine protei 100.0 3.7E-30 1.3E-34 262.9 7.8 185 440-639 11-198 (311)
129 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.9E-29 6.5E-34 259.6 13.1 174 440-637 8-184 (336)
130 2psq_A Fibroblast growth facto 100.0 1.8E-29 6.3E-34 264.0 13.1 190 440-639 80-284 (370)
131 4euu_A Serine/threonine-protei 100.0 3.2E-29 1.1E-33 257.0 14.5 175 441-633 9-188 (319)
132 3ttj_A Mitogen-activated prote 100.0 4E-29 1.4E-33 268.8 15.7 180 440-640 61-243 (464)
133 3n9x_A Phosphotransferase; mal 100.0 4.4E-29 1.5E-33 266.7 15.5 186 440-639 25-231 (432)
134 2qol_A Ephrin receptor; recept 100.0 9.7E-30 3.3E-34 266.3 10.1 181 441-639 45-229 (373)
135 3uc3_A Serine/threonine-protei 100.0 1.8E-29 6.3E-34 263.0 11.9 176 439-638 18-195 (361)
136 4ejn_A RAC-alpha serine/threon 100.0 5.5E-30 1.9E-34 275.0 8.2 179 440-639 147-328 (446)
137 3pfq_A PKC-B, PKC-beta, protei 100.0 3.4E-29 1.2E-33 281.0 14.8 179 439-639 339-521 (674)
138 2x4f_A Myosin light chain kina 100.0 2.5E-29 8.5E-34 263.0 12.6 172 446-639 94-267 (373)
139 2y94_A 5'-AMP-activated protei 100.0 5.4E-29 1.8E-33 267.5 15.5 175 440-637 15-192 (476)
140 2pmi_A Negative RE, cyclin-dep 100.0 3.8E-29 1.3E-33 256.1 13.6 183 440-639 4-188 (317)
141 2izr_A Casein kinase I isoform 100.0 3.1E-29 1.1E-33 258.3 12.8 180 440-639 8-196 (330)
142 3gni_B Strad alpha; kinase fol 100.0 4.6E-29 1.6E-33 263.2 14.1 185 439-639 23-216 (389)
143 3oja_A Leucine-rich immune mol 100.0 7.4E-30 2.5E-34 276.4 8.2 233 52-326 35-270 (487)
144 3vhe_A Vascular endothelial gr 100.0 1.6E-29 5.4E-34 263.7 10.4 201 430-639 11-274 (359)
145 2w4o_A Calcium/calmodulin-depe 100.0 3.3E-29 1.1E-33 259.9 12.8 175 440-639 52-229 (349)
146 3niz_A Rhodanese family protei 100.0 6.1E-29 2.1E-33 253.8 14.5 176 440-638 20-198 (311)
147 3hko_A Calcium/calmodulin-depe 100.0 2.4E-29 8.1E-34 260.9 11.5 196 435-638 20-254 (345)
148 3llt_A Serine/threonine kinase 100.0 3.4E-29 1.2E-33 261.3 12.5 191 425-640 19-239 (360)
149 3soc_A Activin receptor type-2 100.0 4.2E-29 1.4E-33 256.4 12.8 180 439-635 22-208 (322)
150 3oz6_A Mitogen-activated prote 100.0 8.7E-29 3E-33 260.9 15.1 183 439-639 7-210 (388)
151 3g06_A SSPH2 (leucine-rich rep 100.0 9.4E-28 3.2E-32 265.3 23.8 248 3-318 61-308 (622)
152 2vuw_A Serine/threonine-protei 100.0 5.8E-30 2E-34 264.5 5.5 171 441-636 20-253 (336)
153 3kn6_A Ribosomal protein S6 ki 100.0 9.4E-29 3.2E-33 254.0 14.4 169 446-639 16-188 (325)
154 4hcu_A Tyrosine-protein kinase 100.0 4.1E-29 1.4E-33 249.6 11.1 178 440-639 9-186 (269)
155 3cbl_A C-FES, proto-oncogene t 100.0 8E-30 2.7E-34 267.6 5.8 182 439-639 112-294 (377)
156 3f66_A Hepatocyte growth facto 100.0 7.2E-29 2.5E-33 251.7 12.3 182 442-639 26-211 (298)
157 3p1a_A MYT1 kinase, membrane-a 100.0 6.1E-29 2.1E-33 253.9 11.7 175 441-639 57-234 (311)
158 3mi9_A Cell division protein k 100.0 1.6E-28 5.5E-33 255.3 15.1 184 440-636 16-204 (351)
159 3dls_A PAS domain-containing s 100.0 3.9E-29 1.3E-33 257.9 10.2 175 440-637 23-206 (335)
160 3f3z_A Calcium/calmodulin-depe 100.0 1.8E-28 6E-33 246.1 14.6 176 440-639 8-186 (277)
161 1nxk_A MAP kinase-activated pr 100.0 1.3E-28 4.4E-33 260.1 14.2 177 441-639 61-242 (400)
162 1opk_A P150, C-ABL, proto-onco 100.0 4.1E-29 1.4E-33 271.3 10.7 180 440-639 219-398 (495)
163 2a2a_A Death-associated protei 100.0 1.9E-28 6.4E-33 251.5 14.9 176 441-639 12-197 (321)
164 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.4E-29 2.9E-33 247.2 11.8 178 440-639 7-184 (268)
165 3c1x_A Hepatocyte growth facto 100.0 3.4E-29 1.2E-33 261.9 9.2 181 443-639 91-275 (373)
166 1ob3_A PFPK5, cell division co 100.0 6.9E-29 2.4E-33 250.6 11.1 175 441-638 2-179 (288)
167 2z62_A TOLL-like receptor 4, v 100.0 1.4E-27 4.7E-32 239.4 20.5 210 82-334 29-240 (276)
168 3cok_A Serine/threonine-protei 100.0 1.6E-28 5.3E-33 246.6 13.5 179 440-639 10-191 (278)
169 3i6u_A CDS1, serine/threonine- 100.0 1.4E-28 4.9E-33 261.6 14.0 173 438-634 132-315 (419)
170 3l9p_A Anaplastic lymphoma kin 100.0 3.3E-29 1.1E-33 261.8 8.9 186 441-639 71-265 (367)
171 2nru_A Interleukin-1 receptor- 100.0 5.4E-28 1.8E-32 246.4 17.5 189 427-634 11-209 (307)
172 3kk8_A Calcium/calmodulin depe 100.0 1.9E-28 6.5E-33 246.8 13.9 178 439-639 4-186 (284)
173 4agu_A Cyclin-dependent kinase 100.0 1.3E-28 4.6E-33 251.3 12.7 176 441-638 3-181 (311)
174 3fdn_A Serine/threonine-protei 100.0 1.1E-28 3.7E-33 247.9 11.7 177 440-640 8-187 (279)
175 1cm8_A Phosphorylated MAP kina 100.0 2E-28 7E-33 255.7 14.1 178 440-639 24-205 (367)
176 3op5_A Serine/threonine-protei 100.0 9.4E-29 3.2E-33 258.3 11.3 187 439-639 33-240 (364)
177 2o6q_A Variable lymphocyte rec 100.0 9.4E-27 3.2E-31 232.5 25.3 205 106-335 17-222 (270)
178 4fvq_A Tyrosine-protein kinase 100.0 4.1E-29 1.4E-33 252.3 8.0 174 440-638 7-196 (289)
179 3gen_A Tyrosine-protein kinase 100.0 9.6E-29 3.3E-33 248.8 10.6 179 439-639 22-200 (283)
180 2z62_A TOLL-like receptor 4, v 100.0 2.8E-27 9.5E-32 237.2 21.2 220 32-283 12-237 (276)
181 1p9a_G Platelet glycoprotein I 100.0 5.7E-27 2E-31 236.3 23.5 205 103-335 8-212 (290)
182 1luf_A Muscle-specific tyrosin 100.0 5.2E-29 1.8E-33 258.1 8.8 194 436-639 42-255 (343)
183 3lxl_A Tyrosine-protein kinase 100.0 6.2E-29 2.1E-33 255.7 9.3 182 441-638 23-208 (327)
184 2rku_A Serine/threonine-protei 100.0 2.3E-28 8E-33 247.4 13.3 177 441-639 15-194 (294)
185 3kfa_A Tyrosine-protein kinase 100.0 4.6E-29 1.6E-33 251.8 7.9 183 437-639 9-191 (288)
186 2eue_A Carbon catabolite derep 100.0 3.3E-28 1.1E-32 243.8 13.9 173 441-637 13-188 (275)
187 1k9a_A Carboxyl-terminal SRC k 100.0 1.5E-28 5.2E-33 263.8 11.8 175 439-639 191-365 (450)
188 4f0f_A Serine/threonine-protei 100.0 6.1E-28 2.1E-32 243.5 15.5 169 440-634 18-200 (287)
189 3poz_A Epidermal growth factor 100.0 6.4E-29 2.2E-33 255.6 8.5 179 441-639 15-198 (327)
190 2qr7_A Ribosomal protein S6 ki 100.0 7E-29 2.4E-33 256.5 8.7 172 440-637 21-197 (342)
191 2owb_A Serine/threonine-protei 100.0 2.3E-28 7.8E-33 252.4 12.6 177 441-639 41-220 (335)
192 3lm5_A Serine/threonine-protei 100.0 3.1E-28 1.1E-32 250.5 13.4 189 430-639 17-212 (327)
193 3pls_A Macrophage-stimulating 100.0 3.2E-28 1.1E-32 246.8 13.3 181 443-639 23-207 (298)
194 1u5q_A Serine/threonine protei 100.0 2.6E-28 9E-33 252.9 12.8 172 442-639 55-232 (348)
195 2h34_A Serine/threonine-protei 100.0 3.7E-28 1.3E-32 247.8 13.7 180 440-640 33-215 (309)
196 2ac3_A MAP kinase-interacting 100.0 2.1E-28 7.4E-33 250.4 12.0 177 440-634 11-195 (316)
197 3mdy_A Bone morphogenetic prot 100.0 4.4E-28 1.5E-32 250.4 14.4 185 438-639 34-225 (337)
198 3qyz_A Mitogen-activated prote 100.0 3.5E-28 1.2E-32 254.0 13.7 182 439-636 25-207 (364)
199 3qup_A Tyrosine-protein kinase 100.0 4.1E-29 1.4E-33 256.7 6.5 197 434-639 16-218 (323)
200 2jam_A Calcium/calmodulin-depe 100.0 2E-28 6.7E-33 249.3 11.5 175 441-639 9-186 (304)
201 3kex_A Receptor tyrosine-prote 100.0 8.2E-29 2.8E-33 254.6 8.7 179 441-639 13-196 (325)
202 2vgo_A Serine/threonine-protei 100.0 3.6E-28 1.2E-32 244.8 13.2 176 441-640 14-192 (284)
203 4eut_A Serine/threonine-protei 100.0 3.3E-28 1.1E-32 257.0 13.5 177 440-634 8-189 (396)
204 3a7i_A MST3 kinase, serine/thr 100.0 6.9E-28 2.3E-32 245.1 15.3 176 441-639 22-198 (303)
205 1ua2_A CAK, cell division prot 99.9 2.2E-28 7.7E-33 253.6 11.7 177 438-636 7-188 (346)
206 3brb_A Proto-oncogene tyrosine 99.9 1.4E-28 4.7E-33 251.5 9.9 199 432-639 25-228 (313)
207 4e5w_A Tyrosine-protein kinase 99.9 1.4E-28 4.7E-33 250.1 9.6 181 442-638 22-207 (302)
208 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1.1E-28 3.9E-33 254.0 9.1 180 437-639 30-217 (329)
209 3g2f_A Bone morphogenetic prot 99.9 4.5E-28 1.5E-32 250.3 13.5 180 440-635 12-203 (336)
210 2fst_X Mitogen-activated prote 99.9 4.2E-28 1.4E-32 253.1 13.4 178 440-639 28-209 (367)
211 2yex_A Serine/threonine-protei 99.9 9.2E-28 3.1E-32 240.6 15.3 177 441-637 7-184 (276)
212 3tt0_A Basic fibroblast growth 99.9 3.3E-28 1.1E-32 255.8 12.6 190 440-639 68-272 (382)
213 4aaa_A Cyclin-dependent kinase 99.9 4.2E-28 1.4E-32 250.0 12.8 176 441-638 25-203 (331)
214 1csn_A Casein kinase-1; phosph 99.9 5.5E-28 1.9E-32 245.1 13.5 180 440-639 9-197 (298)
215 3pg1_A Mitogen-activated prote 99.9 6.4E-28 2.2E-32 251.9 14.3 188 432-638 13-212 (362)
216 3bhy_A Death-associated protei 99.9 4.6E-28 1.6E-32 243.8 12.7 176 441-639 5-190 (283)
217 1mp8_A Focal adhesion kinase 1 99.9 7.9E-29 2.7E-33 249.2 7.1 180 439-639 13-196 (281)
218 2a19_B Interferon-induced, dou 99.9 1.9E-28 6.5E-33 246.7 9.8 180 440-639 10-200 (284)
219 2eva_A TAK1 kinase - TAB1 chim 99.9 5.7E-28 1.9E-32 246.2 13.3 174 441-639 8-182 (307)
220 2xrw_A Mitogen-activated prote 99.9 9.6E-28 3.3E-32 251.2 15.3 180 440-640 24-206 (371)
221 3eqc_A Dual specificity mitoge 99.9 1.1E-28 3.9E-33 257.4 8.1 176 441-639 33-209 (360)
222 3mwu_A Calmodulin-domain prote 99.9 3.7E-28 1.3E-32 263.8 12.5 174 441-638 22-200 (486)
223 3lb7_A RAF proto-oncogene seri 99.9 6.6E-28 2.3E-32 245.6 13.6 172 439-633 34-207 (307)
224 3mtl_A Cell division protein k 99.9 1.2E-28 4.1E-33 253.2 8.1 176 441-638 2-179 (324)
225 1qcf_A Haematopoetic cell kina 99.9 1.2E-28 4E-33 265.1 8.3 180 438-639 185-364 (454)
226 1p9a_G Platelet glycoprotein I 99.9 1.4E-26 4.7E-31 233.5 22.9 201 80-308 9-209 (290)
227 1t4h_A Serine/threonine-protei 99.9 9.3E-28 3.2E-32 242.5 14.3 177 442-639 27-208 (290)
228 2x7f_A TRAF2 and NCK-interacti 99.9 2.8E-28 9.6E-33 250.7 10.6 188 430-633 13-202 (326)
229 2b9h_A MAP kinase FUS3, mitoge 99.9 6.8E-28 2.3E-32 250.8 13.3 185 439-638 9-201 (353)
230 2y7j_A Phosphorylase B kinase 99.9 5.8E-28 2E-32 252.2 12.7 176 436-634 89-273 (365)
231 3eb0_A Putative uncharacterize 99.9 6.6E-28 2.3E-32 253.7 13.3 184 437-639 3-221 (383)
232 2ivs_A Proto-oncogene tyrosine 99.9 3E-28 1E-32 249.0 10.2 189 440-638 22-230 (314)
233 1rjb_A FL cytokine receptor; k 99.9 4.6E-28 1.6E-32 251.1 11.7 193 437-639 41-253 (344)
234 1mqb_A Ephrin type-A receptor 99.9 4.7E-28 1.6E-32 249.7 11.2 182 440-639 43-229 (333)
235 1p4o_A Insulin-like growth fac 99.9 5.2E-29 1.8E-33 255.7 4.0 196 434-639 18-219 (322)
236 1zy4_A Serine/threonine-protei 99.9 6.2E-28 2.1E-32 245.2 11.9 186 440-638 5-209 (303)
237 2w1i_A JAK2; chromosomal rearr 99.9 3.7E-28 1.3E-32 249.8 10.3 182 441-638 41-226 (326)
238 1x8b_A WEE1HU, WEE1-like prote 99.9 6.1E-28 2.1E-32 243.4 11.7 174 440-635 10-205 (289)
239 2v62_A Serine/threonine-protei 99.9 4.4E-28 1.5E-32 251.3 10.9 185 440-639 36-239 (345)
240 3nyv_A Calmodulin-domain prote 99.9 4.8E-28 1.6E-32 262.9 11.7 175 441-639 26-206 (484)
241 3lij_A Calcium/calmodulin depe 99.9 7.6E-28 2.6E-32 261.8 13.2 175 441-639 37-216 (494)
242 3q5i_A Protein kinase; CDPK, m 99.9 9.2E-28 3.1E-32 261.8 13.8 176 440-639 35-226 (504)
243 2buj_A Serine/threonine-protei 99.9 4.2E-28 1.4E-32 248.3 10.5 187 440-636 28-219 (317)
244 2o6q_A Variable lymphocyte rec 99.9 2.6E-26 9E-31 229.3 23.2 178 52-241 38-216 (270)
245 1vzo_A Ribosomal protein S6 ki 99.9 1.9E-28 6.5E-33 254.9 7.8 174 441-635 54-235 (355)
246 3gxj_A TGF-beta receptor type- 99.9 7.5E-29 2.6E-33 252.1 4.6 178 441-635 3-187 (303)
247 3is5_A Calcium-dependent prote 99.9 5.2E-28 1.8E-32 243.7 10.6 175 441-634 22-200 (285)
248 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 2.6E-28 9E-33 262.1 8.8 179 439-639 182-360 (452)
249 2i6l_A Mitogen-activated prote 99.9 1.8E-27 6.1E-32 243.8 14.7 183 440-638 10-203 (320)
250 3com_A Serine/threonine-protei 99.9 1.5E-27 5.2E-32 243.8 14.1 179 439-640 27-205 (314)
251 2h6d_A 5'-AMP-activated protei 99.9 1.7E-27 5.7E-32 238.8 13.8 175 440-637 10-187 (276)
252 2clq_A Mitogen-activated prote 99.9 1.1E-27 3.8E-32 242.5 12.6 174 443-635 24-198 (295)
253 2j7t_A Serine/threonine-protei 99.9 3.6E-28 1.2E-32 247.1 9.0 173 440-633 18-190 (302)
254 1t46_A HOMO sapiens V-KIT hard 99.9 4.4E-28 1.5E-32 247.7 9.7 190 440-639 22-226 (313)
255 3dtc_A Mitogen-activated prote 99.9 7.9E-28 2.7E-32 240.5 11.3 176 440-639 6-193 (271)
256 2xir_A Vascular endothelial gr 99.9 4.1E-28 1.4E-32 248.2 9.5 200 431-639 17-229 (316)
257 2w5a_A Serine/threonine-protei 99.9 2E-28 6.9E-33 245.9 6.9 184 440-639 5-195 (279)
258 2pvf_A Fibroblast growth facto 99.9 1E-27 3.5E-32 247.4 12.1 189 440-638 34-237 (334)
259 2wqm_A Serine/threonine-protei 99.9 7E-28 2.4E-32 245.9 10.6 181 441-639 32-215 (310)
260 3nsz_A CK II alpha, casein kin 99.9 2.8E-27 9.7E-32 243.7 15.2 171 441-638 36-209 (330)
261 3t9t_A Tyrosine-protein kinase 99.9 5.8E-28 2E-32 240.8 9.6 178 440-639 7-184 (267)
262 1phk_A Phosphorylase kinase; g 99.9 2E-27 6.7E-32 241.1 13.7 173 438-633 14-196 (298)
263 3lzb_A Epidermal growth factor 99.9 4.8E-28 1.6E-32 249.0 9.1 180 440-639 14-198 (327)
264 3ll6_A Cyclin G-associated kin 99.9 1.4E-27 4.8E-32 246.5 12.5 188 440-638 27-231 (337)
265 2ozo_A Tyrosine-protein kinase 99.9 1.2E-27 4E-32 266.1 12.1 178 443-639 337-518 (613)
266 1qpc_A LCK kinase; alpha beta 99.9 6.1E-28 2.1E-32 242.4 8.9 178 439-638 11-188 (279)
267 3kvw_A DYRK2, dual specificity 99.9 1.6E-27 5.5E-32 254.1 12.6 175 440-639 96-278 (429)
268 4hgt_A Casein kinase I isoform 99.9 1.9E-27 6.5E-32 240.8 12.5 183 438-639 6-194 (296)
269 2i1m_A Macrophage colony-stimu 99.9 7.4E-28 2.5E-32 248.4 9.5 195 435-639 40-245 (333)
270 2wtk_C Serine/threonine-protei 99.9 5.1E-27 1.8E-31 238.8 15.5 180 440-636 4-187 (305)
271 3kmu_A ILK, integrin-linked ki 99.9 1.6E-27 5.5E-32 238.0 11.5 173 441-638 10-186 (271)
272 2r3i_A Cell division protein k 99.9 1.5E-27 5.1E-32 242.1 11.2 175 441-636 3-179 (299)
273 3cc6_A Protein tyrosine kinase 99.9 8.3E-28 2.8E-32 241.7 9.2 179 440-639 11-193 (281)
274 3dbq_A Dual specificity protei 99.9 9.8E-28 3.3E-32 248.5 9.6 173 439-634 7-183 (343)
275 3og7_A AKAP9-BRAF fusion prote 99.9 1.9E-27 6.6E-32 240.1 11.4 173 438-633 21-195 (289)
276 2ycf_A Serine/threonine-protei 99.9 1.4E-27 4.7E-32 245.1 10.4 170 440-633 9-189 (322)
277 3uzp_A CKI-delta, CKID, casein 99.9 3.1E-27 1.1E-31 239.3 12.9 181 440-639 8-194 (296)
278 3e3p_A Protein kinase, putativ 99.9 5.2E-27 1.8E-31 244.8 14.8 190 434-639 16-211 (360)
279 1j1b_A Glycogen synthase kinas 99.9 1.1E-27 3.9E-32 254.7 10.0 179 442-639 55-236 (420)
280 3lxp_A Non-receptor tyrosine-p 99.9 1.4E-27 4.9E-32 244.5 10.3 178 443-638 33-215 (318)
281 2pml_X PFPK7, Ser/Thr protein 99.9 5.5E-27 1.9E-31 243.4 14.7 179 440-635 30-225 (348)
282 4fl3_A Tyrosine-protein kinase 99.9 1.1E-27 3.8E-32 267.0 10.0 173 447-639 375-551 (635)
283 1fvr_A Tyrosine-protein kinase 99.9 1.1E-27 3.9E-32 246.3 9.3 185 441-638 25-219 (327)
284 1u59_A Tyrosine-protein kinase 99.9 2.1E-27 7.3E-32 239.5 11.1 179 441-638 9-191 (287)
285 1blx_A Cyclin-dependent kinase 99.9 3.1E-27 1E-31 242.9 12.3 185 438-639 8-198 (326)
286 3byv_A Rhoptry kinase; malaria 99.9 9.3E-29 3.2E-33 259.6 1.0 181 440-635 72-277 (377)
287 4exu_A Mitogen-activated prote 99.9 5.2E-27 1.8E-31 245.7 14.1 177 440-639 41-221 (371)
288 1xbb_A Tyrosine-protein kinase 99.9 6.4E-28 2.2E-32 243.9 7.0 180 439-638 14-198 (291)
289 2h8h_A Proto-oncogene tyrosine 99.9 6.1E-28 2.1E-32 264.5 7.3 180 438-639 264-443 (535)
290 2zmd_A Dual specificity protei 99.9 2.1E-27 7E-32 250.1 10.9 171 441-634 56-230 (390)
291 1b6c_B TGF-B superfamily recep 99.9 6.3E-27 2.1E-31 242.3 14.0 182 437-635 38-226 (342)
292 2yfx_A Tyrosine-protein kinase 99.9 1.8E-27 6.2E-32 244.8 9.7 187 440-639 29-224 (327)
293 4azs_A Methyltransferase WBDD; 99.9 1.3E-27 4.4E-32 262.5 8.3 163 448-635 241-414 (569)
294 2vwi_A Serine/threonine-protei 99.9 9E-28 3.1E-32 244.1 6.5 188 437-634 11-200 (303)
295 3sv0_A Casein kinase I-like; t 99.9 6.3E-27 2.2E-31 251.9 13.4 181 440-639 6-192 (483)
296 1wak_A Serine/threonine-protei 99.9 3.8E-27 1.3E-31 249.2 11.4 179 440-639 36-272 (397)
297 3qa8_A MGC80376 protein; kinas 99.9 6.2E-27 2.1E-31 257.4 13.3 186 440-640 13-203 (676)
298 1byg_A CSK, protein (C-termina 99.9 1.2E-27 4E-32 240.2 6.4 174 440-639 20-193 (278)
299 3coi_A Mitogen-activated prote 99.9 1.3E-26 4.3E-31 241.1 14.1 177 440-639 23-203 (353)
300 3q60_A ROP5B; pseudokinase, tr 99.9 1.1E-27 3.7E-32 251.0 6.0 178 441-638 62-271 (371)
301 4e7w_A Glycogen synthase kinas 99.9 3.9E-27 1.3E-31 248.5 10.2 179 441-639 40-221 (394)
302 3fme_A Dual specificity mitoge 99.9 1.6E-27 5.3E-32 240.8 6.9 174 439-632 5-181 (290)
303 2jii_A Serine/threonine-protei 99.9 1.4E-27 4.7E-32 248.3 6.5 179 440-639 41-247 (352)
304 3an0_A Dual specificity mitoge 99.9 7.7E-27 2.6E-31 241.5 11.7 178 438-634 48-227 (340)
305 1z57_A Dual specificity protei 99.9 9.3E-27 3.2E-31 240.5 12.2 175 440-639 13-213 (339)
306 3rfs_A Internalin B, repeat mo 99.9 6E-26 2E-30 226.9 17.6 221 82-342 20-241 (272)
307 2pzi_A Probable serine/threoni 99.9 7.8E-27 2.7E-31 263.5 12.0 172 440-635 79-252 (681)
308 3rgf_A Cyclin-dependent kinase 99.9 1.4E-26 4.7E-31 245.5 13.0 185 443-638 22-214 (405)
309 2vx3_A Dual specificity tyrosi 99.9 1.2E-26 4E-31 244.1 12.1 183 434-639 47-237 (382)
310 2wei_A Calmodulin-domain prote 99.9 1.2E-26 4.1E-31 234.0 11.1 173 440-635 21-198 (287)
311 3rfs_A Internalin B, repeat mo 99.9 1.3E-25 4.4E-30 224.4 18.4 227 28-319 20-247 (272)
312 3fhr_A MAP kinase-activated pr 99.9 1.3E-26 4.6E-31 239.1 11.5 176 440-638 27-207 (336)
313 2j0j_A Focal adhesion kinase 1 99.9 7.1E-27 2.4E-31 261.4 9.8 182 437-639 386-571 (656)
314 2xwt_C Thyrotropin receptor; s 99.9 7.9E-26 2.7E-30 221.5 15.9 197 81-304 31-236 (239)
315 1u46_A ACK-1, activated CDC42 99.9 4.5E-27 1.5E-31 237.5 6.6 179 441-638 18-202 (291)
316 2iwi_A Serine/threonine-protei 99.9 4.9E-27 1.7E-31 239.9 6.9 178 436-637 26-215 (312)
317 1q8y_A SR protein kinase; tran 99.9 1.4E-26 4.8E-31 242.7 10.1 179 440-639 18-214 (373)
318 2xwt_C Thyrotropin receptor; s 99.9 8.6E-26 2.9E-30 221.3 15.0 194 28-238 32-234 (239)
319 3a99_A Proto-oncogene serine/t 99.9 9.5E-27 3.2E-31 238.6 8.3 177 437-637 39-225 (320)
320 3aln_A Dual specificity mitoge 99.9 3.6E-26 1.2E-30 235.0 12.7 175 440-633 21-198 (327)
321 4ay9_X Follicle-stimulating ho 99.9 2.3E-25 7.8E-30 231.2 17.7 211 6-230 12-226 (350)
322 2eu9_A Dual specificity protei 99.9 4.3E-26 1.5E-30 237.1 12.0 175 440-639 18-218 (355)
323 2rio_A Serine/threonine-protei 99.9 3E-26 1E-30 244.8 10.4 176 443-634 17-206 (434)
324 3goz_A Leucine-rich repeat-con 99.9 2.2E-27 7.7E-32 247.6 1.6 207 7-221 2-240 (362)
325 4glp_A Monocyte differentiatio 99.9 1.1E-25 3.7E-30 229.6 12.5 203 105-331 91-307 (310)
326 3cek_A Dual specificity protei 99.9 1.9E-26 6.6E-31 235.6 6.9 182 430-634 17-202 (313)
327 3goz_A Leucine-rich repeat-con 99.9 9.5E-27 3.2E-31 242.8 3.7 255 31-309 2-299 (362)
328 2y4i_B KSR2, HKSR2, kinase sup 99.9 2.4E-26 8.3E-31 235.4 6.3 181 433-634 25-208 (319)
329 2ca6_A RAN GTPase-activating p 99.9 4.1E-27 1.4E-31 248.0 0.2 249 18-310 23-319 (386)
330 3p23_A Serine/threonine-protei 99.9 6.7E-26 2.3E-30 241.4 9.5 171 441-634 24-200 (432)
331 4glp_A Monocyte differentiatio 99.9 3.2E-25 1.1E-29 226.1 13.0 226 4-243 65-307 (310)
332 2dyl_A Dual specificity mitoge 99.9 1.3E-25 4.4E-30 229.9 9.8 171 440-633 24-197 (318)
333 1h6u_A Internalin H; cell adhe 99.9 2E-24 6.9E-29 219.7 17.7 171 102-307 60-230 (308)
334 1h6u_A Internalin H; cell adhe 99.9 3.6E-24 1.2E-28 217.9 18.8 198 9-235 25-222 (308)
335 3ogk_B Coronatine-insensitive 99.9 4.2E-27 1.4E-31 262.3 -4.2 340 4-357 139-524 (592)
336 3m19_A Variable lymphocyte rec 99.9 1.5E-23 5.2E-28 206.8 21.2 158 160-333 36-194 (251)
337 4ay9_X Follicle-stimulating ho 99.9 3.6E-24 1.2E-28 222.2 16.9 220 82-328 31-256 (350)
338 2ast_B S-phase kinase-associat 99.9 1.9E-25 6.5E-30 230.5 5.1 253 5-316 49-315 (336)
339 2ca6_A RAN GTPase-activating p 99.9 1.6E-26 5.4E-31 243.5 -3.4 235 80-332 31-317 (386)
340 3m19_A Variable lymphocyte rec 99.9 3.5E-23 1.2E-27 204.2 20.7 179 83-309 16-194 (251)
341 2ast_B S-phase kinase-associat 99.9 1.2E-25 4E-30 232.1 2.6 245 51-331 47-306 (336)
342 3en9_A Glycoprotease, O-sialog 99.9 8.4E-25 2.9E-29 238.8 7.8 161 444-634 339-510 (540)
343 3uqc_A Probable conserved tran 99.9 6.9E-24 2.3E-28 213.4 13.7 145 440-604 30-177 (286)
344 3ogk_B Coronatine-insensitive 99.9 2E-26 6.7E-31 256.9 -6.2 270 80-357 191-499 (592)
345 3dzo_A Rhoptry kinase domain; 99.9 1.7E-24 5.7E-29 229.7 7.5 177 441-632 78-279 (413)
346 3m2w_A MAP kinase-activated pr 99.9 1.9E-23 6.4E-28 211.9 13.2 150 441-607 17-171 (299)
347 1zar_A RIO2 kinase; serine kin 99.9 3.3E-23 1.1E-27 207.4 13.3 142 433-605 82-241 (282)
348 2v9t_B SLIT homolog 2 protein 99.9 2.5E-22 8.4E-27 193.7 18.1 159 162-338 14-172 (220)
349 2o6s_A Variable lymphocyte rec 99.9 2E-22 7E-27 192.7 15.5 146 72-230 43-189 (208)
350 2v70_A SLIT-2, SLIT homolog 2 99.9 3.7E-22 1.3E-26 192.4 17.0 161 161-339 13-174 (220)
351 2o6s_A Variable lymphocyte rec 99.9 3.7E-22 1.3E-26 190.9 16.4 178 54-270 10-189 (208)
352 3cvr_A Invasion plasmid antige 99.9 3.5E-22 1.2E-26 218.1 16.0 195 52-294 60-254 (571)
353 3cvr_A Invasion plasmid antige 99.9 4.2E-22 1.4E-26 217.5 16.4 195 22-271 49-255 (571)
354 3e6j_A Variable lymphocyte rec 99.9 2.3E-21 8E-26 188.1 19.0 157 160-335 20-176 (229)
355 2p1m_B Transport inhibitor res 99.9 1.2E-24 4.1E-29 242.5 -5.1 196 157-357 287-517 (594)
356 2p1m_B Transport inhibitor res 99.9 9.4E-25 3.2E-29 243.4 -7.4 199 126-331 286-519 (594)
357 1h6t_A Internalin B; cell adhe 99.9 3E-22 1E-26 201.9 10.7 184 9-219 30-213 (291)
358 1m9s_A Internalin B; cell inva 99.9 6.3E-22 2.1E-26 218.5 13.9 193 5-224 23-215 (605)
359 2xot_A Amphoterin-induced prot 99.9 1.1E-21 3.7E-26 204.3 13.6 159 161-335 41-206 (361)
360 1h6t_A Internalin B; cell adhe 99.9 1.4E-21 4.7E-26 197.0 13.8 189 83-308 26-214 (291)
361 1m9s_A Internalin B; cell inva 99.9 1.4E-21 4.9E-26 215.6 14.0 199 82-317 22-220 (605)
362 2xot_A Amphoterin-induced prot 99.9 2.5E-21 8.6E-26 201.5 13.2 174 54-242 21-201 (361)
363 3sb4_A Hypothetical leucine ri 99.8 1.1E-21 3.8E-26 201.6 9.2 226 72-325 84-328 (329)
364 3e6j_A Variable lymphocyte rec 99.8 2.5E-20 8.7E-25 180.8 17.1 155 52-221 20-174 (229)
365 2v9t_B SLIT homolog 2 protein 99.8 3.7E-20 1.3E-24 178.4 16.9 150 54-242 14-164 (220)
366 2v70_A SLIT-2, SLIT homolog 2 99.8 3.9E-20 1.3E-24 178.3 16.8 151 54-219 14-166 (220)
367 1dce_A Protein (RAB geranylger 99.8 2.5E-23 8.6E-28 228.3 -8.2 200 3-236 349-566 (567)
368 1xeu_A Internalin C; cellular 99.8 6.4E-21 2.2E-25 189.1 8.6 166 29-220 21-186 (263)
369 1xeu_A Internalin C; cellular 99.8 4.8E-21 1.6E-25 190.0 7.7 164 6-195 22-185 (263)
370 1dce_A Protein (RAB geranylger 99.8 2.7E-23 9.3E-28 228.0 -10.0 202 80-325 348-567 (567)
371 4ezg_A Putative uncharacterize 99.8 8.9E-20 3.1E-24 172.6 12.8 153 48-219 41-194 (197)
372 4fdw_A Leucine rich hypothetic 99.8 1.8E-18 6.2E-23 181.6 22.4 266 26-331 112-383 (401)
373 3sb4_A Hypothetical leucine ri 99.8 6.5E-20 2.2E-24 188.3 10.1 246 26-301 48-328 (329)
374 4ezg_A Putative uncharacterize 99.8 7.9E-20 2.7E-24 173.0 9.9 153 126-307 41-194 (197)
375 1zth_A RIO1 serine protein kin 99.8 1.1E-19 3.7E-24 179.6 10.1 139 442-607 48-220 (258)
376 4b8c_D Glucose-repressible alc 99.8 2.1E-20 7.1E-25 211.5 5.6 222 27-306 173-403 (727)
377 4b8c_D Glucose-repressible alc 99.8 2E-20 6.9E-25 211.6 5.2 222 3-283 173-404 (727)
378 1w8a_A SLIT protein; signaling 99.8 2.7E-19 9.3E-24 168.5 11.6 129 162-308 11-140 (192)
379 1w8a_A SLIT protein; signaling 99.8 1.6E-18 5.3E-23 163.2 15.5 129 132-285 11-141 (192)
380 4fdw_A Leucine rich hypothetic 99.8 1.1E-17 3.9E-22 175.5 22.1 264 3-307 113-383 (401)
381 2wfh_A SLIT homolog 2 protein 99.8 5.7E-18 2E-22 159.4 15.3 134 185-338 13-146 (193)
382 2ell_A Acidic leucine-rich nuc 99.7 6.3E-18 2.2E-22 155.5 11.6 140 27-177 24-165 (168)
383 2wfh_A SLIT homolog 2 protein 99.7 2.1E-17 7.3E-22 155.5 14.7 128 162-308 13-140 (193)
384 2o6r_A Variable lymphocyte rec 99.7 4.8E-17 1.6E-21 150.9 15.2 82 252-333 58-139 (177)
385 2o6r_A Variable lymphocyte rec 99.7 8.8E-17 3E-21 149.1 16.1 134 160-311 8-141 (177)
386 2ell_A Acidic leucine-rich nuc 99.7 1.5E-17 5.2E-22 152.9 10.7 133 181-331 23-160 (168)
387 2je0_A Acidic leucine-rich nuc 99.7 2.5E-17 8.7E-22 148.1 9.1 130 27-167 17-148 (149)
388 2je0_A Acidic leucine-rich nuc 99.7 2E-17 6.9E-22 148.8 7.3 127 182-326 17-148 (149)
389 4fs7_A Uncharacterized protein 99.7 1.3E-15 4.4E-20 160.3 22.2 292 15-328 59-376 (394)
390 1a9n_A U2A', U2A'; complex (nu 99.7 1.5E-16 5.1E-21 147.4 9.8 128 3-141 19-152 (176)
391 4gyi_A RIO2 kinase; protein ki 99.7 6E-17 2E-21 166.0 7.8 146 433-605 87-264 (397)
392 1a9n_A U2A', U2A'; complex (nu 99.6 3.1E-16 1.1E-20 145.3 8.7 79 155-235 15-93 (176)
393 3g39_A Variable lymphocyte rec 99.6 5.1E-15 1.7E-19 136.1 13.1 109 208-335 11-119 (170)
394 1ds9_A Outer arm dynein; leuci 99.6 1.6E-17 5.5E-22 157.2 -5.7 127 4-141 19-152 (198)
395 2r9u_A Variable lymphocyte rec 99.6 1.2E-14 4.2E-19 134.0 13.3 83 252-334 39-121 (174)
396 1ds9_A Outer arm dynein; leuci 99.6 7.5E-18 2.6E-22 159.5 -9.0 147 80-236 17-180 (198)
397 3g39_A Variable lymphocyte rec 99.6 1.5E-14 5.3E-19 132.9 13.2 73 161-235 11-83 (170)
398 4fs7_A Uncharacterized protein 99.6 1.5E-13 5.2E-18 144.4 20.5 302 1-323 69-393 (394)
399 2r9u_A Variable lymphocyte rec 99.6 2.9E-14 9.8E-19 131.5 13.2 72 162-235 15-86 (174)
400 4gt6_A Cell surface protein; l 99.5 8.5E-13 2.9E-17 138.7 22.7 294 16-331 52-370 (394)
401 4gt6_A Cell surface protein; l 99.5 4.6E-12 1.6E-16 133.1 22.3 294 39-357 51-368 (394)
402 2ifg_A High affinity nerve gro 99.4 1.4E-13 4.7E-18 142.2 9.2 83 252-335 37-120 (347)
403 2ifg_A High affinity nerve gro 99.4 3.8E-13 1.3E-17 138.8 10.1 103 163-283 12-116 (347)
404 3un9_A NLR family member X1; l 99.4 1.8E-15 6.1E-20 157.2 -8.1 144 81-226 101-259 (372)
405 3un9_A NLR family member X1; l 99.4 9.3E-15 3.2E-19 151.8 -3.1 170 27-203 72-260 (372)
406 4h09_A Hypothetical leucine ri 99.3 1.6E-10 5.5E-15 120.6 24.3 283 22-328 41-343 (379)
407 3tm0_A Aminoglycoside 3'-phosp 99.3 1.5E-11 5.2E-16 121.4 11.6 147 437-605 10-213 (263)
408 4h09_A Hypothetical leucine ri 99.2 1.3E-09 4.5E-14 113.6 24.1 300 3-320 46-358 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.1 2E-10 6.7E-15 113.1 9.3 139 441-606 20-215 (264)
410 2ra8_A Uncharacterized protein 99.0 1.3E-10 4.6E-15 119.4 3.5 156 79-241 170-341 (362)
411 2ra8_A Uncharacterized protein 99.0 1.4E-10 4.7E-15 119.4 2.8 135 99-243 166-320 (362)
412 3dxp_A Putative acyl-COA dehyd 98.9 5.4E-09 1.9E-13 108.1 12.8 145 445-605 42-248 (359)
413 1io0_A Tropomodulin; LRR prote 98.6 5.2E-09 1.8E-13 97.1 -0.4 118 100-219 31-164 (185)
414 3rw6_A Nuclear RNA export fact 98.6 8.2E-09 2.8E-13 100.7 0.6 129 32-165 121-257 (267)
415 1io0_A Tropomodulin; LRR prote 98.6 1.5E-08 5E-13 94.0 2.1 43 22-64 31-78 (185)
416 3rw6_A Nuclear RNA export fact 98.5 1.3E-08 4.6E-13 99.2 -0.1 43 102-144 167-211 (267)
417 3r70_A Aminoglycoside phosphot 98.4 8.4E-07 2.9E-11 89.9 11.5 137 442-606 38-238 (320)
418 3sg8_A APH(2'')-ID; antibiotic 98.4 4.2E-07 1.4E-11 91.4 9.0 139 446-605 25-223 (304)
419 3d1u_A Putative fructosamine-3 98.3 2E-06 6.9E-11 85.4 10.9 77 444-530 18-97 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 2.4E-06 8.3E-11 84.1 11.0 135 449-605 32-223 (272)
421 3tdw_A Gentamicin resistance p 98.3 3.7E-06 1.3E-10 84.5 12.0 138 446-606 24-225 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.4E-05 4.6E-10 82.3 12.0 150 445-605 45-243 (362)
423 3ats_A Putative uncharacterize 97.9 2.3E-05 8E-10 80.5 9.8 85 446-532 25-122 (357)
424 2olc_A MTR kinase, methylthior 97.9 3.7E-05 1.3E-09 80.3 11.0 76 446-528 35-120 (397)
425 3rfe_A Platelet glycoprotein I 97.9 2.2E-05 7.6E-10 67.6 6.8 65 273-339 11-76 (130)
426 2q83_A YTAA protein; 2635576, 97.8 0.00018 6.3E-09 73.1 13.9 32 574-605 221-252 (346)
427 3e4g_A ATP synthase subunit S, 97.6 1.7E-05 5.7E-10 71.7 1.4 12 181-192 138-149 (176)
428 3f7w_A Putative fructosamine-3 97.6 0.0003 1E-08 69.7 10.7 78 442-529 16-96 (288)
429 3e4g_A ATP synthase subunit S, 97.5 1.3E-05 4.4E-10 72.4 0.1 34 183-216 62-95 (176)
430 1pgv_A TMD-1, tropomodulin TMD 97.5 1.8E-05 6.2E-10 72.8 1.0 115 102-218 38-169 (197)
431 3rfe_A Platelet glycoprotein I 97.4 0.00023 7.9E-09 61.1 6.8 56 162-219 11-68 (130)
432 1pgv_A TMD-1, tropomodulin TMD 97.4 2.1E-05 7E-10 72.5 0.0 94 100-195 65-170 (197)
433 3jr1_A Putative fructosamine-3 97.4 0.00097 3.3E-08 66.6 12.0 76 445-530 40-118 (312)
434 2pyw_A Uncharacterized protein 97.2 0.001 3.5E-08 69.8 10.3 31 575-606 232-262 (420)
435 3dxq_A Choline/ethanolamine ki 96.9 0.0034 1.2E-07 62.4 9.7 71 446-530 23-95 (301)
436 2ppq_A HSK, HK, homoserine kin 96.8 0.0036 1.2E-07 62.9 9.3 171 431-605 7-217 (322)
437 1nw1_A Choline kinase (49.2 KD 96.7 0.0032 1.1E-07 66.1 8.1 73 447-530 79-159 (429)
438 3csv_A Aminoglycoside phosphot 96.5 0.013 4.5E-07 59.0 11.6 32 574-605 182-217 (333)
439 3feg_A Choline/ethanolamine ki 96.5 0.0041 1.4E-07 63.8 7.6 146 447-605 56-254 (379)
440 2qg7_A Ethanolamine kinase PV0 96.4 0.012 4E-07 62.1 10.5 74 447-530 114-188 (458)
441 1zyl_A Hypothetical protein YI 96.4 0.027 9.2E-07 56.5 12.9 78 448-529 33-113 (328)
442 3i1a_A Spectinomycin phosphotr 96.1 0.018 6.2E-07 58.2 9.7 31 575-605 206-236 (339)
443 3c5i_A Choline kinase; choline 96.0 0.012 4E-07 60.4 7.6 74 447-530 39-121 (369)
444 3f2s_A CK, chetk-alpha, cholin 94.7 0.11 3.7E-06 53.5 9.8 31 575-605 244-280 (401)
445 3mes_A Choline kinase; malaria 93.2 0.11 3.7E-06 54.0 6.3 74 447-530 76-157 (424)
446 3cxl_A N-chimerin; SH2, RHO-GA 87.8 0.066 2.3E-06 56.5 -1.4 61 445-508 146-214 (463)
447 3g15_A CK, chetk-alpha, cholin 87.2 0.12 4.1E-06 53.4 0.1 30 576-605 245-280 (401)
448 2ks1_B Epidermal growth factor 83.6 0.58 2E-05 30.8 2.0 30 384-413 10-40 (44)
449 2l2t_A Receptor tyrosine-prote 79.9 0.69 2.3E-05 30.4 1.3 29 385-413 10-39 (44)
450 2jwa_A Receptor tyrosine-prote 66.3 1.9 6.6E-05 28.2 0.9 10 392-401 18-27 (44)
451 2lz0_A Uncharacterized protein 66.2 7.3 0.00025 30.9 4.6 48 92-140 7-54 (100)
452 2k9y_A Ephrin type-A receptor 65.6 2.6 8.9E-05 27.2 1.5 14 386-399 14-27 (41)
453 2lz0_A Uncharacterized protein 65.2 18 0.00062 28.5 6.8 45 258-303 8-52 (100)
454 4ann_A ESSB; membrane protein, 62.0 17 0.00058 33.3 6.8 53 550-607 78-130 (215)
455 4ano_A ESSB; membrane protein, 59.4 11 0.00038 34.7 5.1 53 550-607 82-135 (219)
456 1cja_A Protein (actin-fragmin 33.3 2.3E+02 0.0078 27.7 9.9 138 449-605 77-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.8e-49 Score=452.52 Aligned_cols=360 Identities=33% Similarity=0.548 Sum_probs=306.6
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcC-CCCCCCCCEEEccCCCcC-----------------
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVN-LTHCSELRTLDLVLNKLE----------------- 64 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~----------------- 64 (640)
++|++|+|++|++++..|..|+.+++|++|++++|.+++.+|.. |..+++|++|+|++|+++
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEE
Confidence 66777777777777777777777777777777777777666654 677777777777766653
Q ss_pred ---CccccccCCchhhc-CCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCc
Q 035691 65 ---ENQLVGELPPYIGF-TLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARND 140 (640)
Q Consensus 65 ---~~~~~~~lp~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 140 (640)
.|.+.|.+|+.+.. .+++|+.|+|++|++++.+|..|.++++|++|+|++|++++..|..|..+++|++|+|++|+
T Consensus 374 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~ 453 (768)
T 3rgz_A 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453 (768)
T ss_dssp ECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred EccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCc
Confidence 12333444444432 26678888888888888888888889999999999999988888889999999999999999
Q ss_pred CCCCCCCcccccccccCCCCcceEecCCCCCCC-cCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCC
Q 035691 141 LGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRS-IPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIR 219 (640)
Q Consensus 141 l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 219 (640)
+++. .+..+..+++|++|++++|+++. +|..+..+++|++|+|++|++++.+|.+|+.+++|++|+|++|++.
T Consensus 454 l~~~------~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 527 (768)
T 3rgz_A 454 LEGE------IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527 (768)
T ss_dssp CCSC------CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCE
T ss_pred ccCc------CCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCccc
Confidence 8876 56778889999999999999996 8888999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCCccEEeccCccccCC------------------------------------------------------
Q 035691 220 GSIPSALGNCHQLQSLDLSKTIFLGQ------------------------------------------------------ 245 (640)
Q Consensus 220 ~~~~~~~~~l~~L~~L~ls~n~~~~~------------------------------------------------------ 245 (640)
+.+|..++.+++|+.|++++|.+.+.
T Consensus 528 ~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 607 (768)
T 3rgz_A 528 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 607 (768)
T ss_dssp EECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGG
T ss_pred CcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcc
Confidence 99999999999999999999876531
Q ss_pred ------------------------CCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEe
Q 035691 246 ------------------------YPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNL 301 (640)
Q Consensus 246 ------------------------~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 301 (640)
..|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.|||
T Consensus 608 ~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdL 687 (768)
T 3rgz_A 608 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 687 (768)
T ss_dssp GGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred ccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEEC
Confidence 23678999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCCCcCCCcCCCCCCCCCCccc
Q 035691 302 SINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLCGGISELKLPPCTPSESK 377 (640)
Q Consensus 302 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~p~~~~~~~~ 377 (640)
++|+++|.+|..+..+++|++||+++|+++ |.+|..+.+.++....+.||+++||.|. +.|......
T Consensus 688 s~N~l~g~ip~~l~~l~~L~~L~ls~N~l~-----g~iP~~~~~~~~~~~~~~gN~~Lcg~~l----~~C~~~~~~ 754 (768)
T 3rgz_A 688 SSNKLDGRIPQAMSALTMLTEIDLSNNNLS-----GPIPEMGQFETFPPAKFLNNPGLCGYPL----PRCDPSNAD 754 (768)
T ss_dssp CSSCCEECCCGGGGGCCCCSEEECCSSEEE-----EECCSSSSGGGSCGGGGCSCTEEESTTS----CCCCSCC--
T ss_pred CCCcccCcCChHHhCCCCCCEEECcCCccc-----ccCCCchhhccCCHHHhcCCchhcCCCC----cCCCCCccC
Confidence 999999999999999999999999999999 8999999999999999999999999873 367544443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3e-44 Score=411.95 Aligned_cols=347 Identities=33% Similarity=0.481 Sum_probs=285.6
Q ss_pred CCCCCcEEeCCCCccccCCchhhhcC-CCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcC
Q 035691 1 NLTFLMLINLQQNNFSGNIPHEIGRL-FQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFT 79 (640)
Q Consensus 1 nl~~L~~L~L~~n~i~~~~p~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~ 79 (640)
++++|++|+|++|.+++.+|..+..+ ++|++|+|++|.+++.+|..|..+++|++|+|++|+++ |.+|...+..
T Consensus 267 ~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~-----~~ip~~~l~~ 341 (768)
T 3rgz_A 267 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS-----GELPMDTLLK 341 (768)
T ss_dssp CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEE-----EECCHHHHTT
T ss_pred ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCccc-----CcCCHHHHhc
Confidence 35678888888888888888877765 88999999999998888888999999999999877664 3455554445
Q ss_pred CCCCCeeeccCCcccccCCccCc-------------------------C--CCCCCEEECcCCccCccCCccccCCCCCC
Q 035691 80 LPNIRIPLLAGNQFFGNIPHSIS-------------------------N--ASKLEWLDFANNSLTASIPEDLGRLRNLT 132 (640)
Q Consensus 80 l~~L~~L~L~~N~l~~~~~~~~~-------------------------~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (640)
+++|+.|+|++|++++.+|..+. . +++|++|+|++|++++.+|..|..+++|+
T Consensus 342 l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 421 (768)
T 3rgz_A 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV 421 (768)
T ss_dssp CTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCC
T ss_pred CCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCC
Confidence 55555555555555555554443 3 55677777777777777788888888888
Q ss_pred EEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCC-cCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEE
Q 035691 133 RLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRS-IPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTEL 211 (640)
Q Consensus 133 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 211 (640)
+|+|++|++++. .+..+.++++|+.|++++|.++. +|..+..+++|++|++++|.+++.+|..|.++++|++|
T Consensus 422 ~L~Ls~N~l~~~------~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 495 (768)
T 3rgz_A 422 SLHLSFNYLSGT------IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWI 495 (768)
T ss_dssp EEECCSSEEESC------CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred EEECcCCcccCc------ccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEE
Confidence 888888888765 56778888999999999999986 88888889999999999999999999999999999999
Q ss_pred EccCCCCCCCCCccccCCCCccEEeccCccccC--------CCCCceEEccCCcCCCCCCcc------------------
Q 035691 212 NLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG--------QYPVRWLDLSHNHLTGPIPLA------------------ 265 (640)
Q Consensus 212 ~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~--------~~~l~~L~Ls~N~l~~~~~~~------------------ 265 (640)
+|++|++++.+|.+|+.+++|+.|++++|.+.+ +..|++|++++|+++|.+|..
T Consensus 496 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~ 575 (768)
T 3rgz_A 496 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 575 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEE
T ss_pred EccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccc
Confidence 999999999999999999999999999998764 345899999999988776653
Q ss_pred ----------------------------------------------------CCCCCCCCEEECCCCcccCcCCccccCC
Q 035691 266 ----------------------------------------------------VGNLKSIPHLDLSKNKLSGEIPSSLGSC 293 (640)
Q Consensus 266 ----------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 293 (640)
|+.+++|+.|||++|+++|.+|..|+.+
T Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l 655 (768)
T 3rgz_A 576 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSM 655 (768)
T ss_dssp EEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGC
T ss_pred cccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhcc
Confidence 3446789999999999999999999999
Q ss_pred CCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCC-CCCCCCccccccCCCCCcCCCc
Q 035691 294 VGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRK-GIFKNASAISVAGNEKLCGGIS 364 (640)
Q Consensus 294 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~-~~~~~~~~~~~~~n~~~c~~~~ 364 (640)
++|+.|+|++|++++.+|..|+++++|+.|||++|+++ |.+|.. +.++.+..+++++|+. .|..|
T Consensus 656 ~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~-----g~ip~~l~~l~~L~~L~ls~N~l-~g~iP 721 (768)
T 3rgz_A 656 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD-----GRIPQAMSALTMLTEIDLSNNNL-SGPIP 721 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCE-----ECCCGGGGGCCCCSEEECCSSEE-EEECC
T ss_pred ccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCccc-----CcCChHHhCCCCCCEEECcCCcc-cccCC
Confidence 99999999999999999999999999999999999999 777765 6678889999999874 55443
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.1e-43 Score=391.61 Aligned_cols=340 Identities=21% Similarity=0.237 Sum_probs=303.9
Q ss_pred CCCCCcEEeCCCCccccC-----------------Cchhhh--cCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCC
Q 035691 1 NLTFLMLINLQQNNFSGN-----------------IPHEIG--RLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLN 61 (640)
Q Consensus 1 nl~~L~~L~L~~n~i~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 61 (640)
++++|++|+|++|+|++. +|+.++ ++++|++|+|++|.+.+.+|..|.++++|++|+|++|
T Consensus 204 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 204 RLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred cccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 478999999999999986 999988 9999999999999999999999999999999999988
Q ss_pred C-cCCccccc-cCCchhhc-----CCCCCCeeeccCCcccccCCc--cCcCCCCCCEEECcCCccCccCCccccCCCCCC
Q 035691 62 K-LEENQLVG-ELPPYIGF-----TLPNIRIPLLAGNQFFGNIPH--SISNASKLEWLDFANNSLTASIPEDLGRLRNLT 132 (640)
Q Consensus 62 ~-l~~~~~~~-~lp~~~~~-----~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (640)
+ ++ | .+|..++. .+++|+.|+|++|+++ .+|. .|+++++|++|+|++|++++.+| .|..+++|+
T Consensus 284 ~~l~-----~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~ 356 (636)
T 4eco_A 284 RGIS-----GEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLA 356 (636)
T ss_dssp TTSC-----HHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEES
T ss_pred CCCc-----cccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCC
Confidence 7 54 4 57777654 2499999999999999 7787 89999999999999999998888 999999999
Q ss_pred EEEcccCcCCCCCCCcccccccccCCCC-cceEecCCCCCCCcCcCCCCCC--CCCEEEccCCcCcccCCcCcc------
Q 035691 133 RLNFARNDLGTRKVNDLRFLDSLVNCTY-LEIVSLNVNSLRSIPISVGYLP--KLQVLSLFENNISGEIPSSLG------ 203 (640)
Q Consensus 133 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~-L~~L~L~~N~l~~ip~~~~~l~--~L~~L~L~~N~l~~~~p~~~~------ 203 (640)
+|+|++|+++. .+..+.++++ |++|++++|.++.+|..+..++ +|++|++++|.+++..|..|.
T Consensus 357 ~L~L~~N~l~~-------lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~ 429 (636)
T 4eco_A 357 SLNLAYNQITE-------IPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTP 429 (636)
T ss_dssp EEECCSSEEEE-------CCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSC
T ss_pred EEECCCCcccc-------ccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCCcchhhhccccccc
Confidence 99999999985 4566888999 9999999999999998877654 899999999999999999998
Q ss_pred -CCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCC---------------CCceEEccCCcCCCCCCccCC
Q 035691 204 -NFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQY---------------PVRWLDLSHNHLTGPIPLAVG 267 (640)
Q Consensus 204 -~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~---------------~l~~L~Ls~N~l~~~~~~~~~ 267 (640)
.+++|++|+|++|+++...+..+..+++|+.|++++|.+...+ .|++|+|++|+++ .+|..+.
T Consensus 430 ~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 508 (636)
T 4eco_A 430 FKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFR 508 (636)
T ss_dssp CCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGS
T ss_pred ccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhh
Confidence 8889999999999999666666778999999999999876432 6899999999999 6777776
Q ss_pred --CCCCCCEEECCCCcccCcCCccccCCCCCCeEEe------cCCccCCCCCccCCCCCCCCeEeCcCCccccccCCccc
Q 035691 268 --NLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNL------SINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDV 339 (640)
Q Consensus 268 --~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 339 (640)
.+++|+.|+|++|+|++ +|..+..+++|++|+| ++|++.+.+|..+..+++|++|+|++|.++. +
T Consensus 509 ~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~------i 581 (636)
T 4eco_A 509 ATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK------V 581 (636)
T ss_dssp TTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCB------C
T ss_pred hccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCCc------c
Confidence 99999999999999997 8999999999999999 5688899999999999999999999999964 3
Q ss_pred CCCCCCCCCccccccCCCCCcCCC
Q 035691 340 PRKGIFKNASAISVAGNEKLCGGI 363 (640)
Q Consensus 340 p~~~~~~~~~~~~~~~n~~~c~~~ 363 (640)
|.. ..+.+..+++++|++.|-..
T Consensus 582 p~~-~~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 582 NEK-ITPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp CSC-CCTTCCEEECCSCTTCEEEC
T ss_pred CHh-HhCcCCEEECcCCCCccccH
Confidence 432 33789999999999987543
No 4
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.1e-42 Score=387.27 Aligned_cols=198 Identities=21% Similarity=0.142 Sum_probs=137.8
Q ss_pred CcceEecCCCCCCCc---CcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCC-ccccCCCCccEE
Q 035691 160 YLEIVSLNVNSLRSI---PISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIP-SALGNCHQLQSL 235 (640)
Q Consensus 160 ~L~~L~L~~N~l~~i---p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L 235 (640)
+|++|++++|.++.+ |..+..+++|++|++++|.+.+ +|..|..+++|++|++++|++.+..| ..|..+++|+.|
T Consensus 351 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 429 (606)
T 3vq2_A 351 SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYL 429 (606)
T ss_dssp TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEE
T ss_pred CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEE
Confidence 334444444444332 3333444555555555555553 44566677777777777777776666 567777777777
Q ss_pred eccCccccC--------CCCCceEEccCCcCCC-CCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCcc
Q 035691 236 DLSKTIFLG--------QYPVRWLDLSHNHLTG-PIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSF 306 (640)
Q Consensus 236 ~ls~n~~~~--------~~~l~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 306 (640)
++++|.+.+ +..|++|++++|++++ .+|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++
T Consensus 430 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 509 (606)
T 3vq2_A 430 DISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509 (606)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcC
Confidence 777775433 3457888888888876 4677888888888888888888877788888888888888888888
Q ss_pred CCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCC-CCccccccCCCCCcCCC
Q 035691 307 HGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFK-NASAISVAGNEKLCGGI 363 (640)
Q Consensus 307 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~-~~~~~~~~~n~~~c~~~ 363 (640)
++..|..|..+++|++|||++|+++..+.. ...++ ++..+++.+|+|.|.++
T Consensus 510 ~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~-----~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 510 LFLDSSHYNQLYSLSTLDCSFNRIETSKGI-----LQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp SCEEGGGTTTCTTCCEEECTTSCCCCEESC-----GGGSCTTCCEEECCSCCCCCSST
T ss_pred CCcCHHHccCCCcCCEEECCCCcCcccCHh-----HhhhcccCcEEEccCCCcccCCc
Confidence 887788888888888888888888743321 12233 57888999999988765
No 5
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-42 Score=372.43 Aligned_cols=329 Identities=19% Similarity=0.142 Sum_probs=212.7
Q ss_pred CCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCC
Q 035691 4 FLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNI 83 (640)
Q Consensus 4 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L 83 (640)
+++.|||++|+|++..|..|.++++|++|+|++|.|++..|.+|.++++|++|+|++|+|+. +|...|..+++|
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~L 106 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL------IPLGVFTGLSNL 106 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCS------CCTTSSTTCTTC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCc------cCcccccCCCCC
Confidence 45555555555555555555555555555555555555555555555555555555555543 555554455555
Q ss_pred CeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcce
Q 035691 84 RIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEI 163 (640)
Q Consensus 84 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~ 163 (640)
+.|+|++|++++..|..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++.+ .+..+.++++|+.
T Consensus 107 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------~~~~l~~l~~L~~ 180 (477)
T 2id5_A 107 TKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI------PTEALSHLHGLIV 180 (477)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC------CHHHHTTCTTCCE
T ss_pred CEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc------ChhHhcccCCCcE
Confidence 5555555555555555555555555555555555555555555555555555555555544 2233445555555
Q ss_pred EecCCCCCCCcCc-CCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccc
Q 035691 164 VSLNVNSLRSIPI-SVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIF 242 (640)
Q Consensus 164 L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~ 242 (640)
|++++|.++.++. .+..+++|++|++++|.+.+.+|..+....+|+.|+|++|++++..+..|..+++|+.|
T Consensus 181 L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L------- 253 (477)
T 2id5_A 181 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFL------- 253 (477)
T ss_dssp EEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEE-------
T ss_pred EeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCee-------
Confidence 5555555555332 44455555555555555444444444444455555555555554333445555555555
Q ss_pred cCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCe
Q 035691 243 LGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEG 322 (640)
Q Consensus 243 ~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 322 (640)
+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|++
T Consensus 254 ---------~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 324 (477)
T 2id5_A 254 ---------NLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLET 324 (477)
T ss_dssp ---------ECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCE
T ss_pred ---------ECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCE
Confidence 88999999888899999999999999999999999999999999999999999999988889999999999
Q ss_pred EeCcCCccccccCCcccCCCCCCCCCccccccCCCCCcCCCcC
Q 035691 323 LDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLCGGISE 365 (640)
Q Consensus 323 L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~ 365 (640)
|+|++|+|.|.|...++.. ......+.++...|..|..
T Consensus 325 L~l~~N~l~c~c~~~~~~~-----~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 325 LILDSNPLACDCRLLWVFR-----RRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp EECCSSCEECSGGGHHHHT-----TTTSSCCTTCCCBEEESGG
T ss_pred EEccCCCccCccchHhHHh-----hhhccccCccCceeCCchH
Confidence 9999999999886544322 1223456677888877653
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-42 Score=397.08 Aligned_cols=357 Identities=21% Similarity=0.174 Sum_probs=208.7
Q ss_pred CCCCCcEEeCCCCccccCC-chhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCc-hhhc
Q 035691 1 NLTFLMLINLQQNNFSGNI-PHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPP-YIGF 78 (640)
Q Consensus 1 nl~~L~~L~L~~n~i~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~-~~~~ 78 (640)
++++|++|||++|.+.+.+ |.+|.++++|++|+|++|.|++..|.+|.++++|++|+|++|.+++ .+|. ..+.
T Consensus 46 ~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~-----~~~~~~~~~ 120 (844)
T 3j0a_A 46 FLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSD-----AVLKDGYFR 120 (844)
T ss_dssp SCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSS-----CCSTTCCCS
T ss_pred ccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCc-----ccccCcccc
Confidence 4677888888888554444 6778888888888888888887778888888888888888777653 2232 2355
Q ss_pred CCCCCCeeeccCCcccccCC-ccCcCCCCCCEEECcCCccCccCCccccCC--CC-------------------------
Q 035691 79 TLPNIRIPLLAGNQFFGNIP-HSISNASKLEWLDFANNSLTASIPEDLGRL--RN------------------------- 130 (640)
Q Consensus 79 ~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~------------------------- 130 (640)
.+++|+.|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..|..+ ++
T Consensus 121 ~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~ 200 (844)
T 3j0a_A 121 NLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNP 200 (844)
T ss_dssp SCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCT
T ss_pred ccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCc
Confidence 67777777777777776654 467777777777777777766655555433 33
Q ss_pred -----CCEEEcccCcCCCCCCCccc-------------------------------------------------------
Q 035691 131 -----LTRLNFARNDLGTRKVNDLR------------------------------------------------------- 150 (640)
Q Consensus 131 -----L~~L~L~~N~l~~~~~~~~~------------------------------------------------------- 150 (640)
|+.|+|++|.++......+.
T Consensus 201 ~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~ 280 (844)
T 3j0a_A 201 FRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFS 280 (844)
T ss_dssp TTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCE
T ss_pred cccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccc
Confidence 44455544433221100000
Q ss_pred -ccccccCCCCcceEecCCCCCCCc-CcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccC
Q 035691 151 -FLDSLVNCTYLEIVSLNVNSLRSI-PISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGN 228 (640)
Q Consensus 151 -~~~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 228 (640)
.+..|..+++|+.|+|++|.++.+ |..+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++.+..+..|.+
T Consensus 281 ~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 360 (844)
T 3j0a_A 281 LNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKF 360 (844)
T ss_dssp ECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCS
T ss_pred cChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcC
Confidence 122344555566666666666553 334555666666666666666555666666666666666666666555556666
Q ss_pred CCCccEEeccCccccC------------------------------------------------CCCCceEEccCCcCCC
Q 035691 229 CHQLQSLDLSKTIFLG------------------------------------------------QYPVRWLDLSHNHLTG 260 (640)
Q Consensus 229 l~~L~~L~ls~n~~~~------------------------------------------------~~~l~~L~Ls~N~l~~ 260 (640)
+++|+.|++++|.+.+ +..|+.|+|++|++++
T Consensus 361 l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~ 440 (844)
T 3j0a_A 361 LEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSS 440 (844)
T ss_dssp CCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCC
T ss_pred CCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccc
Confidence 6666666666655432 1223334444444332
Q ss_pred CCCc-cCCCCCCCCEEECCCCccc-----CcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCcccccc
Q 035691 261 PIPL-AVGNLKSIPHLDLSKNKLS-----GEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKS 334 (640)
Q Consensus 261 ~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 334 (640)
..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|.|++.+|..|..+++|++|+|++|.++..+
T Consensus 441 ~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~ 520 (844)
T 3j0a_A 441 CSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLS 520 (844)
T ss_dssp CCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCC
T ss_pred cccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccC
Confidence 2111 1222333333333333332 122234555566666666666666666666666666666666666665443
Q ss_pred CC-----------------cccCCCCCCCCCccccccCCCCCcCCCc
Q 035691 335 QN-----------------GDVPRKGIFKNASAISVAGNEKLCGGIS 364 (640)
Q Consensus 335 ~~-----------------~~~p~~~~~~~~~~~~~~~n~~~c~~~~ 364 (640)
.. +..| ..+..+..+++.+|||.|.+..
T Consensus 521 ~~~~~~~L~~L~Ls~N~l~~~~~--~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 521 HNDLPANLEILDISRNQLLAPNP--DVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCCCCSCCCEEEEEEECCCCCCS--CCCSSCCEEEEEEECCCCSSSC
T ss_pred hhhhhccccEEECCCCcCCCCCh--hHhCCcCEEEecCCCccccccc
Confidence 32 2222 3366788999999999997653
No 7
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.6e-42 Score=370.76 Aligned_cols=345 Identities=19% Similarity=0.162 Sum_probs=250.8
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCc-cCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQG-QIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLP 81 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~ 81 (640)
++|++|||++|+|++..|..|.++++|++|++++|.+.+ +.+..|.++++|++|||++|+++. +++..+..++
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~------~~~~~~~~l~ 103 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ------LETGAFNGLA 103 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCE------ECTTTTTTCT
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCc------cChhhccCcc
Confidence 568999999999998889999999999999999999974 446789999999999999998875 5555666799
Q ss_pred CCCeeeccCCcccccCCcc--CcCCCCCCEEECcCCccCccCCcc-ccCCCCCCEEEcccCcCCCCCCCcccccccccCC
Q 035691 82 NIRIPLLAGNQFFGNIPHS--ISNASKLEWLDFANNSLTASIPED-LGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNC 158 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l 158 (640)
+|+.|+|++|++++..|.. |.++++|++|+|++|++++..|.. |.++++|++|+|++|+++.... ..+..+
T Consensus 104 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~------~~l~~l 177 (455)
T 3v47_A 104 NLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICE------EDLLNF 177 (455)
T ss_dssp TCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCT------TTSGGG
T ss_pred cCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccCh------hhhhcc
Confidence 9999999999998755544 999999999999999999887776 8999999999999999988743 334433
Q ss_pred --CCcceEecCCCCCCCcCcC---------CCCCCCCCEEEccCCcCcccCCcCccCC---CCCCEEEccCCCCCCC---
Q 035691 159 --TYLEIVSLNVNSLRSIPIS---------VGYLPKLQVLSLFENNISGEIPSSLGNF---TFLTELNLRGNSIRGS--- 221 (640)
Q Consensus 159 --~~L~~L~L~~N~l~~ip~~---------~~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~--- 221 (640)
.+|+.|++++|.+..++.. +..+++|++|++++|.+.+..|..+... ++|+.|++++|.+.+.
T Consensus 178 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 257 (455)
T 3v47_A 178 QGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG 257 (455)
T ss_dssp TTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTT
T ss_pred ccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccc
Confidence 6788899999988886642 3356788999999998887776655433 5666666666544321
Q ss_pred -------CCccccCC--CCccEEeccCccccC--------CCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccC
Q 035691 222 -------IPSALGNC--HQLQSLDLSKTIFLG--------QYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSG 284 (640)
Q Consensus 222 -------~~~~~~~l--~~L~~L~ls~n~~~~--------~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 284 (640)
.+..+..+ ++|+.|++++|.+.+ +..|++|+|++|++++..|..|.++++|+.|+|++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 337 (455)
T 3v47_A 258 HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGS 337 (455)
T ss_dssp CCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred hhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCC
Confidence 11122222 456666666665432 3346666777777776666677777777777777777766
Q ss_pred cCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCCCcCCC
Q 035691 285 EIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLCGGI 363 (640)
Q Consensus 285 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 363 (640)
..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|+++..+.. ....++.++.+++.+|++.|..+
T Consensus 338 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 338 IDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDG----IFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp ECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT----TTTTCTTCCEEECCSSCBCCCTT
T ss_pred cChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHh----HhccCCcccEEEccCCCcccCCC
Confidence 6666667777777777777777666666777777777777777776632211 01345566667777777766554
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.4e-41 Score=375.20 Aligned_cols=323 Identities=21% Similarity=0.221 Sum_probs=154.5
Q ss_pred CCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCC
Q 035691 2 LTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLP 81 (640)
Q Consensus 2 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~ 81 (640)
+++|++|+|++|+|++..|.+|.++++|++|+|++|++++..|.+|.++++|++|+|++|+|+. +++..+..++
T Consensus 56 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~------l~~~~~~~l~ 129 (606)
T 3t6q_A 56 LINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISS------IDFIPLHNQK 129 (606)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSC------GGGSCCTTCT
T ss_pred CccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCccc------CCcchhccCC
Confidence 3444444444444444444444444444444444444444444444444444444444444443 3333334455
Q ss_pred CCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCC--EEEcccCcCCCCCCCccccc-------
Q 035691 82 NIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLT--RLNFARNDLGTRKVNDLRFL------- 152 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~~------- 152 (640)
+|+.|+|++|++++..+..+..+++|++|+|++|++++..|..|+.+++|+ .|++++|.+++++...+...
T Consensus 130 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l 209 (606)
T 3t6q_A 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNF 209 (606)
T ss_dssp TCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEEC
T ss_pred cccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhcccccccc
Confidence 555555555555554333333455555555555555555555555556555 55666665554433222110
Q ss_pred ------------------------------------ccccCCC--CcceEecCCCCCCCcCcC-CCCCCCCCEEEccCCc
Q 035691 153 ------------------------------------DSLVNCT--YLEIVSLNVNSLRSIPIS-VGYLPKLQVLSLFENN 193 (640)
Q Consensus 153 ------------------------------------~~l~~l~--~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~L~~N~ 193 (640)
..+.++. +|+.|++++|.++.++.. +..+++|++|++++|.
T Consensus 210 ~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 289 (606)
T 3t6q_A 210 GGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATH 289 (606)
T ss_dssp TTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSC
T ss_pred CCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCc
Confidence 0000000 344444444444443332 4445555555555555
Q ss_pred CcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcccc---------CCCCCceEEccCCcCCCCC--
Q 035691 194 ISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFL---------GQYPVRWLDLSHNHLTGPI-- 262 (640)
Q Consensus 194 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~---------~~~~l~~L~Ls~N~l~~~~-- 262 (640)
++ .+|..+..+++|++|++++|++.+..|..+..+++|+.|++++|.+. .+..|++|++++|.+++..
T Consensus 290 l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 368 (606)
T 3t6q_A 290 LS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCC 368 (606)
T ss_dssp CS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEES
T ss_pred cC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCc
Confidence 55 34444555555555555555555444445555555555555554322 2233455555555554433
Q ss_pred CccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCc-cCCCCCCCCeEeCcCCccc
Q 035691 263 PLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHP-GLSSLKSLEGLDLFQNTFQ 331 (640)
Q Consensus 263 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~ 331 (640)
+..+..+++|+.|++++|++++..|..|..+++|++|++++|++++..|. .+..+++|++|++++|.++
T Consensus 369 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 438 (606)
T 3t6q_A 369 NLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLD 438 (606)
T ss_dssp TTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCB
T ss_pred chhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccC
Confidence 44455555555555555555544444555555555555555555443332 2444555555555555444
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.1e-41 Score=379.15 Aligned_cols=187 Identities=18% Similarity=0.138 Sum_probs=170.7
Q ss_pred ccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCC-cCccCCCCCCEEEccCCCCCCCCCccccCCCC
Q 035691 153 DSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIP-SSLGNFTFLTELNLRGNSIRGSIPSALGNCHQ 231 (640)
Q Consensus 153 ~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 231 (640)
..+..+++|++|++++|.++.+|..+..+++|++|++++|.+.+..| ..|..+++|++|++++|++.+..|..|.++++
T Consensus 370 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 449 (606)
T 3vq2_A 370 YSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTS 449 (606)
T ss_dssp HHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTT
T ss_pred hhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCC
Confidence 34567899999999999999999889999999999999999998887 78999999999999999999999999999999
Q ss_pred ccEEeccCccccC---------CCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEec
Q 035691 232 LQSLDLSKTIFLG---------QYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLS 302 (640)
Q Consensus 232 L~~L~ls~n~~~~---------~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 302 (640)
|+.|++++|.+.+ +..|+.|+|++|++++..|..|.++++|+.|+|++|++++.+|..|..+++|++|+|+
T Consensus 450 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 529 (606)
T 3vq2_A 450 LNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCS 529 (606)
T ss_dssp CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECT
T ss_pred CCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECC
Confidence 9999999997654 3458999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCccCCCCC-CCCeEeCcCCccccccCCcccC
Q 035691 303 INSFHGPIHPGLSSLK-SLEGLDLFQNTFQAKSQNGDVP 340 (640)
Q Consensus 303 ~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~p 340 (640)
+|+++ .+|..+..++ +|++|++++|+|.|.|...+..
T Consensus 530 ~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~ 567 (606)
T 3vq2_A 530 FNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQKFL 567 (606)
T ss_dssp TSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHHHH
T ss_pred CCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHHHH
Confidence 99999 5666688887 6999999999999988654443
No 10
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=375.80 Aligned_cols=348 Identities=20% Similarity=0.163 Sum_probs=238.7
Q ss_pred CCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCC
Q 035691 4 FLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNI 83 (640)
Q Consensus 4 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L 83 (640)
+++.|||++|+|++..+..|.++++|++|+|++|+++++.|.+|.++++|++|+|++|+++. +|+..+..+++|
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~L 102 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS------LALGAFSGLSSL 102 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE------ECTTTTTTCTTC
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCc------cCHhhhcCcccc
Confidence 46666666666666666666666666666666666666666666666666666666666654 555555556666
Q ss_pred CeeeccCCcccccCCccCcCCCCCCEEECcCCccCcc-CCccccCCCCCCEEEcccCcCCCCCCC---------------
Q 035691 84 RIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTAS-IPEDLGRLRNLTRLNFARNDLGTRKVN--------------- 147 (640)
Q Consensus 84 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~--------------- 147 (640)
+.|+|++|++++..+..|+++++|++|+|++|.+++. .|..|+++++|++|++++|+++.++..
T Consensus 103 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L 182 (570)
T 2z63_A 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSL 182 (570)
T ss_dssp CEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEE
T ss_pred ccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhc
Confidence 6666666666655554566666666666666666542 355566666666666666655443211
Q ss_pred -------------ccc----------------------------------------------------------------
Q 035691 148 -------------DLR---------------------------------------------------------------- 150 (640)
Q Consensus 148 -------------~~~---------------------------------------------------------------- 150 (640)
.+.
T Consensus 183 ~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l 262 (570)
T 2z63_A 183 DLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEF 262 (570)
T ss_dssp ECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEE
T ss_pred ccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhh
Confidence 110
Q ss_pred -----------ccccccCCCCcceEecCCCCCCCcCcCCCC---------------------------------------
Q 035691 151 -----------FLDSLVNCTYLEIVSLNVNSLRSIPISVGY--------------------------------------- 180 (640)
Q Consensus 151 -----------~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~--------------------------------------- 180 (640)
.++.+..+++|+.|++++|.++.+|..+..
T Consensus 263 ~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~ 342 (570)
T 2z63_A 263 RLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFS 342 (570)
T ss_dssp EEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCC
T ss_pred hhhcchhhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccc
Confidence 012234456777777777777766654433
Q ss_pred ---CCCCCEEEccCCcCcccC--CcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccC---------CC
Q 035691 181 ---LPKLQVLSLFENNISGEI--PSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG---------QY 246 (640)
Q Consensus 181 ---l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~---------~~ 246 (640)
+++|++|++++|.+++.. |..+.++++|++|++++|.+.+..+. |..+++|+.|++++|.+.+ +.
T Consensus 343 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 421 (570)
T 2z63_A 343 EVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 421 (570)
T ss_dssp CCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCT
T ss_pred cccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCC
Confidence 445555555555555432 44556666777777777776644443 7778888888888775543 34
Q ss_pred CCceEEccCCcCCCCCCccCCCCCCCCEEECCCCccc-CcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeC
Q 035691 247 PVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLS-GEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDL 325 (640)
Q Consensus 247 ~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 325 (640)
.|++|++++|.+++..|..|.++++|+.|+|++|+++ +.+|..|..+++|++|+|++|++++..|..|..+++|++|++
T Consensus 422 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 501 (570)
T 2z63_A 422 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 501 (570)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeC
Confidence 5888999999998888889999999999999999997 578889999999999999999999888999999999999999
Q ss_pred cCCccccccCCcccCC-CCCCCCCccccccCCCCCcCCC
Q 035691 326 FQNTFQAKSQNGDVPR-KGIFKNASAISVAGNEKLCGGI 363 (640)
Q Consensus 326 ~~N~l~~~~~~~~~p~-~~~~~~~~~~~~~~n~~~c~~~ 363 (640)
++|.++.. .|. ...++.+..+++.+|++.|..+
T Consensus 502 ~~n~l~~~-----~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 502 ASNQLKSV-----PDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CSSCCSCC-----CTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcCCCC-----CHHHhhcccCCcEEEecCCcccCCCc
Confidence 99998843 332 2456788999999999988654
No 11
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3e-40 Score=369.74 Aligned_cols=338 Identities=17% Similarity=0.113 Sum_probs=298.7
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
..+++|||++|.|++..|..|.++++|++|+|++|+++++.|.+|.++++|++|+|++|+++. +++..+..+++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~------~~~~~~~~l~~ 106 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF------MAETALSGPKA 106 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE------ECTTTTSSCTT
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccc------cChhhhccccc
Confidence 368999999999999999999999999999999999999999999999999999999999875 66666778999
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcc
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLE 162 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 162 (640)
|+.|+|++|++++..|..|+++++|++|+|++|++++..+..+..+++|++|+|++|+++.+ .+..+..+++|+
T Consensus 107 L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------~~~~~~~l~~L~ 180 (606)
T 3t6q_A 107 LKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYL------SKEDMSSLQQAT 180 (606)
T ss_dssp CCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEE------CHHHHHTTTTCC
T ss_pred ccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccccc------Chhhhhhhcccc
Confidence 99999999999998889999999999999999999986656666799999999999999876 456678888898
Q ss_pred --eEecCCCCCCCcCcCCCCCC----------------------------------------------------CCCEEE
Q 035691 163 --IVSLNVNSLRSIPISVGYLP----------------------------------------------------KLQVLS 188 (640)
Q Consensus 163 --~L~L~~N~l~~ip~~~~~l~----------------------------------------------------~L~~L~ 188 (640)
.|++++|.++.+++...... +|+.|+
T Consensus 181 ~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~ 260 (606)
T 3t6q_A 181 NLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESIN 260 (606)
T ss_dssp SEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEE
T ss_pred eeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEE
Confidence 89999999998655433222 678899
Q ss_pred ccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccC--------CCCCceEEccCCcCCC
Q 035691 189 LFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG--------QYPVRWLDLSHNHLTG 260 (640)
Q Consensus 189 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~--------~~~l~~L~Ls~N~l~~ 260 (640)
+++|.++++.+..|..+++|++|++++|+++ .+|..+..+++|+.|++++|.+.+ +..|++|++++|.+.+
T Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 339 (606)
T 3t6q_A 261 LQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL 339 (606)
T ss_dssp CTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCC
T ss_pred eecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccc
Confidence 9999999888888999999999999999999 778889999999999999997654 4569999999999986
Q ss_pred CCC-ccCCCCCCCCEEECCCCcccCcC--CccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCc
Q 035691 261 PIP-LAVGNLKSIPHLDLSKNKLSGEI--PSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNG 337 (640)
Q Consensus 261 ~~~-~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 337 (640)
.+| ..|..+++|++|++++|++++.. |..+..+++|++|++++|++++..|..|..+++|++|++++|.++.
T Consensus 340 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----- 414 (606)
T 3t6q_A 340 ELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV----- 414 (606)
T ss_dssp BCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEEC-----
T ss_pred ccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCC-----
Confidence 665 45999999999999999999766 7889999999999999999999999999999999999999999983
Q ss_pred ccCC--CCCCCCCccccccCCCC
Q 035691 338 DVPR--KGIFKNASAISVAGNEK 358 (640)
Q Consensus 338 ~~p~--~~~~~~~~~~~~~~n~~ 358 (640)
..|. ...++.+..+++++|..
T Consensus 415 ~~~~~~~~~l~~L~~L~l~~n~l 437 (606)
T 3t6q_A 415 KDAQSPFQNLHLLKVLNLSHSLL 437 (606)
T ss_dssp CTTCCTTTTCTTCCEEECTTCCC
T ss_pred cccchhhhCcccCCEEECCCCcc
Confidence 3222 24567888999998864
No 12
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.1e-41 Score=376.58 Aligned_cols=322 Identities=18% Similarity=0.270 Sum_probs=282.7
Q ss_pred ccccCCchhhhcCCCCCeEEcccCccCcc-----------------CCcCCC--CCCCCCEEEccCCCcCCccccccCCc
Q 035691 14 NFSGNIPHEIGRLFQLRYIIFNSNTLQGQ-----------------IPVNLT--HCSELRTLDLVLNKLEENQLVGELPP 74 (640)
Q Consensus 14 ~i~~~~p~~~~~l~~L~~L~l~~N~l~~~-----------------~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~lp~ 74 (640)
++++ +|.+|+++++|++|+|++|.+++. +|..+. ++++|++|+|++|++. |.+|.
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~-----~~~p~ 267 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL-----TKLPT 267 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC-----SSCCT
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC-----ccChH
Confidence 4455 889999999999999999999985 999999 9999999999987765 46886
Q ss_pred hhhcCCCCCCeeeccCCc-ccc-cCCccCcCC------CCCCEEECcCCccCccCCc--cccCCCCCCEEEcccCcCCCC
Q 035691 75 YIGFTLPNIRIPLLAGNQ-FFG-NIPHSISNA------SKLEWLDFANNSLTASIPE--DLGRLRNLTRLNFARNDLGTR 144 (640)
Q Consensus 75 ~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~ 144 (640)
.+. .+++|+.|+|++|+ +++ .+|..++++ ++|++|+|++|+++ .+|. .|+.+++|++|+|++|++++.
T Consensus 268 ~l~-~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ 345 (636)
T 4eco_A 268 FLK-ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGK 345 (636)
T ss_dssp TTT-TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEE
T ss_pred HHh-cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccc
Confidence 655 59999999999998 998 889888876 99999999999999 6887 899999999999999999832
Q ss_pred CCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCC-CCEEEccCCcCcccCCcCccCCC--CCCEEEccCCCCCCC
Q 035691 145 KVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPK-LQVLSLFENNISGEIPSSLGNFT--FLTELNLRGNSIRGS 221 (640)
Q Consensus 145 ~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~ 221 (640)
.+ .+..+++|+.|++++|+++.+|..+..+++ |++|++++|.++ .+|..+..++ +|++|++++|++.+.
T Consensus 346 ------ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 346 ------LP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp ------CC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred ------hh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 34 678889999999999999999999999999 999999999999 7888888765 999999999999999
Q ss_pred CCcccc-------CCCCccEEeccCccccCC--------CCCceEEccCCcCCCCCCccCCCCC-------CCCEEECCC
Q 035691 222 IPSALG-------NCHQLQSLDLSKTIFLGQ--------YPVRWLDLSHNHLTGPIPLAVGNLK-------SIPHLDLSK 279 (640)
Q Consensus 222 ~~~~~~-------~l~~L~~L~ls~n~~~~~--------~~l~~L~Ls~N~l~~~~~~~~~~l~-------~L~~L~Ls~ 279 (640)
+|..|. .+++|+.|++++|.+... ..|++|+|++|+++...+..+.... +|+.|+|++
T Consensus 418 ~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~ 497 (636)
T 4eco_A 418 DGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRF 497 (636)
T ss_dssp TTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCS
T ss_pred chhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcC
Confidence 999998 888999999999987643 4589999999999955555555443 999999999
Q ss_pred CcccCcCCcccc--CCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCC------ccccccCCcccCCC-CCCCCCcc
Q 035691 280 NKLSGEIPSSLG--SCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQN------TFQAKSQNGDVPRK-GIFKNASA 350 (640)
Q Consensus 280 N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N------~l~~~~~~~~~p~~-~~~~~~~~ 350 (640)
|+|+ .+|..+. .+++|++|+|++|++++ +|..+..+++|++|+|++| .+. +.+|.. ..++.++.
T Consensus 498 N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~-----~~~p~~l~~l~~L~~ 570 (636)
T 4eco_A 498 NKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTL-----REWPEGITLCPSLTQ 570 (636)
T ss_dssp SCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCC-----CCCCTTGGGCSSCCE
T ss_pred CcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCccc-----ccChHHHhcCCCCCE
Confidence 9999 7888887 99999999999999998 8999999999999999654 444 566654 56788999
Q ss_pred ccccCCCC
Q 035691 351 ISVAGNEK 358 (640)
Q Consensus 351 ~~~~~n~~ 358 (640)
+++++|..
T Consensus 571 L~Ls~N~l 578 (636)
T 4eco_A 571 LQIGSNDI 578 (636)
T ss_dssp EECCSSCC
T ss_pred EECCCCcC
Confidence 99999975
No 13
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.8e-40 Score=358.37 Aligned_cols=334 Identities=19% Similarity=0.185 Sum_probs=291.0
Q ss_pred cEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCe
Q 035691 6 MLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRI 85 (640)
Q Consensus 6 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~ 85 (640)
+.++.++++++ .+|. + .++|++|+|++|.|++..|..|.++++|++|+|++|.+. +.+++..+..+++|+.
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~-----~~i~~~~~~~l~~L~~ 83 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPG-----LVIRNNTFRGLSSLII 83 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTT-----CEECTTTTTTCTTCCE
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCccc-----ceECcccccccccCCE
Confidence 46888999998 5665 3 378999999999999988999999999999999988875 3577888888999999
Q ss_pred eeccCCcccccCCccCcCCCCCCEEECcCCccCccCCcc--ccCCCCCCEEEcccCcCCCCCCCccccccc-ccCCCCcc
Q 035691 86 PLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPED--LGRLRNLTRLNFARNDLGTRKVNDLRFLDS-LVNCTYLE 162 (640)
Q Consensus 86 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~-l~~l~~L~ 162 (640)
|+|++|++++..|..|+++++|++|+|++|++++..+.. |..+++|++|+|++|+++.+ .+.. +.++++|+
T Consensus 84 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~------~~~~~~~~l~~L~ 157 (455)
T 3v47_A 84 LKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI------QPASFFLNMRRFH 157 (455)
T ss_dssp EECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC------CCCGGGGGCTTCC
T ss_pred EeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCcc------CcccccCCCCccc
Confidence 999999999999999999999999999999999755544 99999999999999999987 3343 78899999
Q ss_pred eEecCCCCCCCc-CcCCCCC--CCCCEEEccCCcCcccCCcCc--------cCCCCCCEEEccCCCCCCCCCccccCC--
Q 035691 163 IVSLNVNSLRSI-PISVGYL--PKLQVLSLFENNISGEIPSSL--------GNFTFLTELNLRGNSIRGSIPSALGNC-- 229 (640)
Q Consensus 163 ~L~L~~N~l~~i-p~~~~~l--~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~N~l~~~~~~~~~~l-- 229 (640)
+|++++|.++.+ |..+..+ .+|+.|++++|.+.+..+..+ ..+++|++|++++|++.+..|..+..+
T Consensus 158 ~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~ 237 (455)
T 3v47_A 158 VLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIA 237 (455)
T ss_dssp EEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTT
T ss_pred EEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcccc
Confidence 999999999985 5555544 689999999999997666543 367899999999999998888877665
Q ss_pred -CCccEEeccCccccCC--------------------CCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCc
Q 035691 230 -HQLQSLDLSKTIFLGQ--------------------YPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPS 288 (640)
Q Consensus 230 -~~L~~L~ls~n~~~~~--------------------~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 288 (640)
++|+.|++++|...+. ..+++|++++|++++..|..|..+++|+.|+|++|++++..|.
T Consensus 238 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 317 (455)
T 3v47_A 238 GTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN 317 (455)
T ss_dssp TCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT
T ss_pred ccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChh
Confidence 8999999998854332 4699999999999999999999999999999999999988899
Q ss_pred cccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCC-CCCCCCCccccccCCCCC
Q 035691 289 SLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPR-KGIFKNASAISVAGNEKL 359 (640)
Q Consensus 289 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~-~~~~~~~~~~~~~~n~~~ 359 (640)
.|.++++|++|+|++|.+++..|..|..+++|++|+|++|.++. ..|. ...++++..+++.+|...
T Consensus 318 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~ 384 (455)
T 3v47_A 318 AFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA-----LGDQSFLGLPNLKELALDTNQLK 384 (455)
T ss_dssp TTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE-----ECTTTTTTCTTCCEEECCSSCCS
T ss_pred HhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc-----cChhhccccccccEEECCCCccc
Confidence 99999999999999999999889999999999999999999983 3333 256788999999998753
No 14
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.5e-41 Score=382.23 Aligned_cols=336 Identities=20% Similarity=0.225 Sum_probs=250.3
Q ss_pred CCcEEeCCCCccccCCchhhhcCCCCCeEEc-ccCccCcc----------------------------------------
Q 035691 4 FLMLINLQQNNFSGNIPHEIGRLFQLRYIIF-NSNTLQGQ---------------------------------------- 42 (640)
Q Consensus 4 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l-~~N~l~~~---------------------------------------- 42 (640)
.++.|+|++|+++|.+|++|++|++|++|+| ++|.++|.
T Consensus 324 ~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l 403 (876)
T 4ecn_A 324 RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDL 403 (876)
T ss_dssp CEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHH
Confidence 5778888999998888888889999999988 77654333
Q ss_pred ------------------------------------CCcCCCCCCCCCEEEccCCCcCC------------ccccccCCc
Q 035691 43 ------------------------------------IPVNLTHCSELRTLDLVLNKLEE------------NQLVGELPP 74 (640)
Q Consensus 43 ------------------------------------~~~~~~~l~~L~~L~Ls~N~l~~------------~~~~~~lp~ 74 (640)
+|..|.++++|++|+|++|+|+. +.+.|.+|+
T Consensus 404 ~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~ 483 (876)
T 4ecn_A 404 LQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE 483 (876)
T ss_dssp HHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS
T ss_pred HHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCCh
Confidence 67778888889999988888765 223335777
Q ss_pred hh-hcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCc-cCc-cCCccccCCC-------CCCEEEcccCcCCCC
Q 035691 75 YI-GFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNS-LTA-SIPEDLGRLR-------NLTRLNFARNDLGTR 144 (640)
Q Consensus 75 ~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~~ 144 (640)
.+ |..+++|+.|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|++|+|++|+++.+
T Consensus 484 ~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~i 563 (876)
T 4ecn_A 484 ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEF 563 (876)
T ss_dssp CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBC
T ss_pred hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCcc
Confidence 76 4468888888888888888888888888888888888887 887 6776555544 888888888888743
Q ss_pred CCCcccccc--cccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCC-CCEEEccCCCCCCC
Q 035691 145 KVNDLRFLD--SLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTF-LTELNLRGNSIRGS 221 (640)
Q Consensus 145 ~~~~~~~~~--~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~ 221 (640)
|. .+.++++|+.|+|++|+++.+| .+..+++|+.|+|++|.++ .+|..+..+++ |+.|+|++|+++ .
T Consensus 564 -------p~~~~l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~ 633 (876)
T 4ecn_A 564 -------PASASLQKMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-Y 633 (876)
T ss_dssp -------CCHHHHTTCTTCCEEECTTSCCCBCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-S
T ss_pred -------CChhhhhcCCCCCEEECCCCCcccch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-c
Confidence 34 6778888888888888888888 7778888888888888888 67777888888 888888888888 6
Q ss_pred CCccccCCCC--ccEEeccCccccCCC-------------CCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcC
Q 035691 222 IPSALGNCHQ--LQSLDLSKTIFLGQY-------------PVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEI 286 (640)
Q Consensus 222 ~~~~~~~l~~--L~~L~ls~n~~~~~~-------------~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 286 (640)
+|..+..++. |+.|++++|.+.+.. .|+.|+|++|+++..++..+..+++|+.|+|++|+|+ .+
T Consensus 634 lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~i 712 (876)
T 4ecn_A 634 IPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SI 712 (876)
T ss_dssp CCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CC
T ss_pred CchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-cc
Confidence 6777776654 888888888775432 4677788888777443344457777777777777777 44
Q ss_pred CccccC--------CCCCCeEEecCCccCCCCCccCC--CCCCCCeEeCcCCccccccCCcccCCC-CCCCCCccccccC
Q 035691 287 PSSLGS--------CVGLEYLNLSINSFHGPIHPGLS--SLKSLEGLDLFQNTFQAKSQNGDVPRK-GIFKNASAISVAG 355 (640)
Q Consensus 287 p~~~~~--------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~~p~~-~~~~~~~~~~~~~ 355 (640)
|..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+++. +|.. ..++++..+++++
T Consensus 713 p~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~------lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 713 PENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS------FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp CTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS------CCCGGGGCTTCCEEECCC
T ss_pred ChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc------cchhhhcCCCCCEEECCC
Confidence 443322 227777777777777 5566665 77777777777777773 3322 4456667777766
Q ss_pred CC
Q 035691 356 NE 357 (640)
Q Consensus 356 n~ 357 (640)
|+
T Consensus 786 N~ 787 (876)
T 4ecn_A 786 QR 787 (876)
T ss_dssp CB
T ss_pred CC
Confidence 55
No 15
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-40 Score=378.06 Aligned_cols=336 Identities=21% Similarity=0.231 Sum_probs=291.7
Q ss_pred CCCCCcEEeCCCCcccc-----------------CCchhhh--cCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCC
Q 035691 1 NLTFLMLINLQQNNFSG-----------------NIPHEIG--RLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLN 61 (640)
Q Consensus 1 nl~~L~~L~L~~n~i~~-----------------~~p~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 61 (640)
+|++|++|+|++|+|++ .+|+.++ ++++|++|+|++|.+.+.+|..|.++++|++|+|++|
T Consensus 446 ~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred cCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 47899999999999998 3898877 9999999999999999999999999999999999988
Q ss_pred C-cCCccccc-cCCchhh------cCCCCCCeeeccCCcccccCCc--cCcCCCCCCEEECcCCccCccCCccccCCCCC
Q 035691 62 K-LEENQLVG-ELPPYIG------FTLPNIRIPLLAGNQFFGNIPH--SISNASKLEWLDFANNSLTASIPEDLGRLRNL 131 (640)
Q Consensus 62 ~-l~~~~~~~-~lp~~~~------~~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 131 (640)
+ ++ | .+|..++ ..+++|+.|+|++|+++ .+|. .|+++++|++|+|++|+++ .+| .|+.+++|
T Consensus 526 ~~ls-----g~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L 597 (876)
T 4ecn_A 526 RGIS-----AAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKL 597 (876)
T ss_dssp TTSC-----HHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEE
T ss_pred CCcc-----cccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcc
Confidence 7 54 4 4666543 34569999999999999 7787 8999999999999999999 677 89999999
Q ss_pred CEEEcccCcCCCCCCCcccccccccCCCC-cceEecCCCCCCCcCcCCCCCCC--CCEEEccCCcCcccCCcCc---c--
Q 035691 132 TRLNFARNDLGTRKVNDLRFLDSLVNCTY-LEIVSLNVNSLRSIPISVGYLPK--LQVLSLFENNISGEIPSSL---G-- 203 (640)
Q Consensus 132 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~-L~~L~L~~N~l~~ip~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~-- 203 (640)
+.|+|++|+++.+ +..+.++++ |+.|++++|.++.+|..+..++. |+.|+|++|.+.+.+|... .
T Consensus 598 ~~L~Ls~N~l~~l-------p~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~ 670 (876)
T 4ecn_A 598 TDLKLDYNQIEEI-------PEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDY 670 (876)
T ss_dssp SEEECCSSCCSCC-------CTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTC
T ss_pred eEEECcCCccccc-------hHHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhhhccc
Confidence 9999999999854 456888898 99999999999999988776654 9999999999998766432 2
Q ss_pred CCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCC---------------CCceEEccCCcCCCCCCccCC-
Q 035691 204 NFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQY---------------PVRWLDLSHNHLTGPIPLAVG- 267 (640)
Q Consensus 204 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~---------------~l~~L~Ls~N~l~~~~~~~~~- 267 (640)
.+++|+.|+|++|+++..++..+..+++|+.|+|++|.+...+ .|+.|+|++|+|+ .+|..+.
T Consensus 671 ~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~ 749 (876)
T 4ecn_A 671 KGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRA 749 (876)
T ss_dssp CCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGST
T ss_pred cCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhh
Confidence 3458999999999999554455668999999999999875322 6899999999999 6788887
Q ss_pred -CCCCCCEEECCCCcccCcCCccccCCCCCCeEEecC------CccCCCCCccCCCCCCCCeEeCcCCccccccCCcccC
Q 035691 268 -NLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSI------NSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVP 340 (640)
Q Consensus 268 -~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p 340 (640)
.+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|++|+|++|++.. +|
T Consensus 750 ~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~~------Ip 822 (876)
T 4ecn_A 750 TTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRK------VD 822 (876)
T ss_dssp TTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCB------CC
T ss_pred ccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCCCc------cC
Confidence 99999999999999996 799999999999999976 88899999999999999999999999963 34
Q ss_pred CCCCCCCCccccccCCCCCc
Q 035691 341 RKGIFKNASAISVAGNEKLC 360 (640)
Q Consensus 341 ~~~~~~~~~~~~~~~n~~~c 360 (640)
.. ..+++..+++++|++..
T Consensus 823 ~~-l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 823 EK-LTPQLYILDIADNPNIS 841 (876)
T ss_dssp SC-CCSSSCEEECCSCTTCE
T ss_pred Hh-hcCCCCEEECCCCCCCc
Confidence 33 33688999999998754
No 16
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.8e-40 Score=368.23 Aligned_cols=350 Identities=21% Similarity=0.212 Sum_probs=275.6
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
+++++|||++|+|+++.|.+|.++++|++|+|++|+|+++.|.+|.++++|++|+|++|+|+. +|+..|.++++
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~------l~~~~f~~L~~ 125 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS------LALGAFSGLSS 125 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE------ECGGGGTTCTT
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC------CCHHHhcCCCC
Confidence 368999999999998888999999999999999999998889999999999999999999986 99999999999
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCcc-CCccccCCCCCCEEEcccCcCCCCCCCccccc---------
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTAS-IPEDLGRLRNLTRLNFARNDLGTRKVNDLRFL--------- 152 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~--------- 152 (640)
|+.|+|++|+|+++.+..|+++++|++|+|++|+++.. .|..++.+++|++|+|++|+|+.+....+...
T Consensus 126 L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~ 205 (635)
T 4g8a_A 126 LQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 205 (635)
T ss_dssp CCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCE
T ss_pred CCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhh
Confidence 99999999999999888999999999999999999864 57889999999999999999876543221100
Q ss_pred --------------------------------------------------------------------------------
Q 035691 153 -------------------------------------------------------------------------------- 152 (640)
Q Consensus 153 -------------------------------------------------------------------------------- 152 (640)
T Consensus 206 ~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~ 285 (635)
T 4g8a_A 206 LDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEE 285 (635)
T ss_dssp EECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEE
T ss_pred hhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhh
Confidence
Q ss_pred ------------------------------------ccccCCCCcceEecCCCCCCCcCc--------------------
Q 035691 153 ------------------------------------DSLVNCTYLEIVSLNVNSLRSIPI-------------------- 176 (640)
Q Consensus 153 ------------------------------------~~l~~l~~L~~L~L~~N~l~~ip~-------------------- 176 (640)
..+.....|+.|++.+|.+..++.
T Consensus 286 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~ 365 (635)
T 4g8a_A 286 FRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF 365 (635)
T ss_dssp EEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBC
T ss_pred hhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCc
Confidence 000111234445555554443221
Q ss_pred CCCCCCCCCEEEccCCcCccc-------------------------CCcCccCCCCCCEEEccCCCCCCCCC-ccccCCC
Q 035691 177 SVGYLPKLQVLSLFENNISGE-------------------------IPSSLGNFTFLTELNLRGNSIRGSIP-SALGNCH 230 (640)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~-------------------------~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 230 (640)
....+++|+.|++++|.+... .+..+..+++|+.+++++|......+ ..|..+.
T Consensus 366 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~ 445 (635)
T 4g8a_A 366 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 445 (635)
T ss_dssp CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCT
T ss_pred ccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccc
Confidence 112356777788877776421 22345556666667776665544433 4577788
Q ss_pred CccEEeccCcccc--------CCCCCceEEccCCcC-CCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEe
Q 035691 231 QLQSLDLSKTIFL--------GQYPVRWLDLSHNHL-TGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNL 301 (640)
Q Consensus 231 ~L~~L~ls~n~~~--------~~~~l~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 301 (640)
+++.++++.|.+. +...++.|+|++|++ .+..|..|..+++|++|+|++|+|++.+|..|.++++|++|+|
T Consensus 446 ~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~L 525 (635)
T 4g8a_A 446 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 525 (635)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEEC
Confidence 8888888887654 344588999999974 4467889999999999999999999888999999999999999
Q ss_pred cCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCC-CCC-CCCccccccCCCCCcCCC
Q 035691 302 SINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRK-GIF-KNASAISVAGNEKLCGGI 363 (640)
Q Consensus 302 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~-~~~-~~~~~~~~~~n~~~c~~~ 363 (640)
++|+|++..|..|..+++|++|||++|+++.. .|.. ..+ +++..+++++|||.|.+.
T Consensus 526 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~-----~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 526 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS-----KKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTSCCCBCCCGGGTTCTTCCEEECTTSCCCBC-----CSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCCCChhHHhCCCCCCEEECCCCcCCCC-----CHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999998899999999999999999999843 3332 223 578889999999999654
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=361.07 Aligned_cols=340 Identities=20% Similarity=0.219 Sum_probs=275.1
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|..|.++++|++|||++|+|+. +|.. .+++
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------lp~~---~l~~ 91 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK------ISCH---PTVN 91 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE------EECC---CCCC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee------cCcc---ccCC
Confidence 579999999999998888999999999999999999998889999999999999999999975 7766 5999
Q ss_pred CCeeeccCCcccc-cCCccCcCCCCCCEEECcCCccCccCCccccCCCCC--CEEEcccCcC--CCCCCCcccccc----
Q 035691 83 IRIPLLAGNQFFG-NIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNL--TRLNFARNDL--GTRKVNDLRFLD---- 153 (640)
Q Consensus 83 L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~~~---- 153 (640)
|+.|+|++|++++ ..|..|+++++|++|+|++|+|++ ..|..+++| ++|+|++|.+ ....+..+....
T Consensus 92 L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l 168 (520)
T 2z7x_B 92 LKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESL 168 (520)
T ss_dssp CSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEE
T ss_pred ccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceE
Confidence 9999999999998 478999999999999999999986 457778888 9999999988 333222211100
Q ss_pred ----------------c------------------------------ccC---------------------------CCC
Q 035691 154 ----------------S------------------------------LVN---------------------------CTY 160 (640)
Q Consensus 154 ----------------~------------------------------l~~---------------------------l~~ 160 (640)
. +.. +++
T Consensus 169 ~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~ 248 (520)
T 2z7x_B 169 HIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTT 248 (520)
T ss_dssp EEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSS
T ss_pred EEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCc
Confidence 0 111 125
Q ss_pred cceEecCCCCCC-CcCcCC-----CCCCCCCEEEccCCcCcccCC-c-------------------------CccCCCCC
Q 035691 161 LEIVSLNVNSLR-SIPISV-----GYLPKLQVLSLFENNISGEIP-S-------------------------SLGNFTFL 208 (640)
Q Consensus 161 L~~L~L~~N~l~-~ip~~~-----~~l~~L~~L~L~~N~l~~~~p-~-------------------------~~~~l~~L 208 (640)
|++|++++|+++ .+|..+ ..+++|+.+++++|.+ .+| . .+..+++|
T Consensus 249 L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L 326 (520)
T 2z7x_B 249 VWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPF 326 (520)
T ss_dssp CSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCC
T ss_pred ccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcc
Confidence 777777777777 477766 5565555555555555 122 1 12678999
Q ss_pred CEEEccCCCCCCCCCccccCCCCccEEeccCccccC----------CCCCceEEccCCcCCCCCCc-cCCCCCCCCEEEC
Q 035691 209 TELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG----------QYPVRWLDLSHNHLTGPIPL-AVGNLKSIPHLDL 277 (640)
Q Consensus 209 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~----------~~~l~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L 277 (640)
++|++++|++++..|..++.+++|+.|++++|.+.+ +..|++|++++|++++.+|. .|..+++|+.|+|
T Consensus 327 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L 406 (520)
T 2z7x_B 327 LHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNM 406 (520)
T ss_dssp CEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEEC
T ss_pred cEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEEC
Confidence 999999999999899999999999999999997763 45699999999999984554 5899999999999
Q ss_pred CCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCC
Q 035691 278 SKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNE 357 (640)
Q Consensus 278 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~ 357 (640)
++|++++..|..+. ++|++|+|++|+++ .+|..+..+++|++|+|++|+++..+.. ....++.+..+++.+|+
T Consensus 407 s~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~----~~~~l~~L~~L~l~~N~ 479 (520)
T 2z7x_B 407 SSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDG----IFDRLTSLQKIWLHTNP 479 (520)
T ss_dssp CSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTT----TTTTCTTCCEEECCSSC
T ss_pred cCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHH----HhccCCcccEEECcCCC
Confidence 99999988887765 78999999999999 6777777999999999999999844322 12456788999999999
Q ss_pred CCcCCC
Q 035691 358 KLCGGI 363 (640)
Q Consensus 358 ~~c~~~ 363 (640)
+.|.++
T Consensus 480 ~~c~c~ 485 (520)
T 2z7x_B 480 WDCSCP 485 (520)
T ss_dssp BCCCHH
T ss_pred CcccCC
Confidence 988654
No 18
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.5e-39 Score=369.09 Aligned_cols=345 Identities=21% Similarity=0.187 Sum_probs=238.5
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCC--CCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQ--LRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTL 80 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~--L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l 80 (640)
++|+.|++++|.+++..|..|..++. |++|++++|++++..|..|..+++|++|+|++|+++. +++..+..+
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l 295 (680)
T 1ziw_A 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQH------LFSHSLHGL 295 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSE------ECTTTTTTC
T ss_pred ccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCc------cChhhhcCC
Confidence 56777777777777666666766644 7777777777776666667777777777777666653 333333344
Q ss_pred CCCCeeeccCCcccc-----cCC----ccCcCCCCCCEEECcCCccCccCCccccCCCC---------------------
Q 035691 81 PNIRIPLLAGNQFFG-----NIP----HSISNASKLEWLDFANNSLTASIPEDLGRLRN--------------------- 130 (640)
Q Consensus 81 ~~L~~L~L~~N~l~~-----~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~--------------------- 130 (640)
++|+.|+|++|...+ .+| ..|..+++|++|++++|+++++.+..|.++++
T Consensus 296 ~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f 375 (680)
T 1ziw_A 296 FNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETF 375 (680)
T ss_dssp TTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTT
T ss_pred CCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhh
Confidence 455555554443221 111 13444444555555555544444444444444
Q ss_pred -------CCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCC-cC-cCCCCCCCCCEEEccCCcCcccCCcC
Q 035691 131 -------LTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRS-IP-ISVGYLPKLQVLSLFENNISGEIPSS 201 (640)
Q Consensus 131 -------L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~-ip-~~~~~l~~L~~L~L~~N~l~~~~p~~ 201 (640)
|+.|+|++|+++.+ .+..|..+++|+.|++++|.++. +| ..+..+++|++|++++|++.+..+..
T Consensus 376 ~~~~~~~L~~L~L~~n~l~~~------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 449 (680)
T 1ziw_A 376 VSLAHSPLHILNLTKNKISKI------ESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNS 449 (680)
T ss_dssp GGGTTSCCCEEECTTSCCCEE------CTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTT
T ss_pred cccccCcCceEECCCCCCCeE------ChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhh
Confidence 45555555555444 34566777888888888888865 55 46677788888888888888777778
Q ss_pred ccCCCCCCEEEccCCCCC--CCCCccccCCCCccEEeccCccccC--------CCCCceEEccCCcCCCCCC--------
Q 035691 202 LGNFTFLTELNLRGNSIR--GSIPSALGNCHQLQSLDLSKTIFLG--------QYPVRWLDLSHNHLTGPIP-------- 263 (640)
Q Consensus 202 ~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~ls~n~~~~--------~~~l~~L~Ls~N~l~~~~~-------- 263 (640)
|..+++|+.|++++|.+. +..|..|.++++|+.|++++|.+.+ +..|++|+|++|++++..+
T Consensus 450 ~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 529 (680)
T 1ziw_A 450 FALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPI 529 (680)
T ss_dssp TTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCC
T ss_pred hhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcc
Confidence 888888888888888876 4677888888888888888886543 3457888999888875422
Q ss_pred ccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCC
Q 035691 264 LAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKG 343 (640)
Q Consensus 264 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~ 343 (640)
..|.++++|+.|+|++|+++...+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.++...... .+
T Consensus 530 ~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~----~~ 605 (680)
T 1ziw_A 530 YFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV----FG 605 (680)
T ss_dssp CTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHH----HH
T ss_pred hhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhH----hc
Confidence 34788889999999999998555567888999999999999999888888889999999999999888433211 01
Q ss_pred -CCCCCccccccCCCCCcCCC
Q 035691 344 -IFKNASAISVAGNEKLCGGI 363 (640)
Q Consensus 344 -~~~~~~~~~~~~n~~~c~~~ 363 (640)
.++++..+++.+|||.|.+.
T Consensus 606 ~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 606 PAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp HHHTTCSEEECTTCCCCBCCC
T ss_pred ccccccCEEEccCCCcccCCc
Confidence 35678899999999999765
No 19
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=361.27 Aligned_cols=340 Identities=19% Similarity=0.187 Sum_probs=263.6
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|.+|.++++|++|||++|+|++ +|.. .+++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------lp~~---~l~~ 122 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN------ISCC---PMAS 122 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE------ECSC---CCTT
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc------cCcc---cccc
Confidence 578899999999998888889999999999999999998888899999999999999998875 7766 5899
Q ss_pred CCeeeccCCccccc-CCccCcCCCCCCEEECcCCccCccCCccccCCCCC--CEEEcccCcC--CCCCCCcccccc----
Q 035691 83 IRIPLLAGNQFFGN-IPHSISNASKLEWLDFANNSLTASIPEDLGRLRNL--TRLNFARNDL--GTRKVNDLRFLD---- 153 (640)
Q Consensus 83 L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~~~---- 153 (640)
|+.|+|++|++++. .|..|+++++|++|+|++|++++. .|..+++| ++|+|++|++ +...+..+....
T Consensus 123 L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l 199 (562)
T 3a79_B 123 LRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL 199 (562)
T ss_dssp CSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE
T ss_pred CCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceE
Confidence 99999999999874 468899999999999999998863 45555666 9999999988 554332222110
Q ss_pred ----------------cccCCC-------------------------------------------------------Ccc
Q 035691 154 ----------------SLVNCT-------------------------------------------------------YLE 162 (640)
Q Consensus 154 ----------------~l~~l~-------------------------------------------------------~L~ 162 (640)
.+..++ +|+
T Consensus 200 ~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~ 279 (562)
T 3a79_B 200 HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVE 279 (562)
T ss_dssp EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEE
T ss_pred EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhccccc
Confidence 011112 566
Q ss_pred eEecCCCCCC-CcCcCC-----CCC--------------------------CCCCEEEccCCcCcccCCcCccCCCCCCE
Q 035691 163 IVSLNVNSLR-SIPISV-----GYL--------------------------PKLQVLSLFENNISGEIPSSLGNFTFLTE 210 (640)
Q Consensus 163 ~L~L~~N~l~-~ip~~~-----~~l--------------------------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 210 (640)
+|++++|.++ .+|..+ ..+ .+|++|++++|.+.... ....+++|++
T Consensus 280 ~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 357 (562)
T 3a79_B 280 YLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTF 357 (562)
T ss_dssp EEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCE
T ss_pred EEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceE
Confidence 6666666666 366544 222 23555555555554211 1267899999
Q ss_pred EEccCCCCCCCCCccccCCCCccEEeccCccccC----------CCCCceEEccCCcCCC-CCCccCCCCCCCCEEECCC
Q 035691 211 LNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG----------QYPVRWLDLSHNHLTG-PIPLAVGNLKSIPHLDLSK 279 (640)
Q Consensus 211 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~----------~~~l~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~ 279 (640)
|++++|++++..|..|.++++|+.|++++|.+.+ +..|++|++++|++++ ..+..|..+++|+.|+|++
T Consensus 358 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~ 437 (562)
T 3a79_B 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSS 437 (562)
T ss_dssp EECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCS
T ss_pred EECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCC
Confidence 9999999998899999999999999999997764 3458999999999998 4455699999999999999
Q ss_pred CcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCCC
Q 035691 280 NKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKL 359 (640)
Q Consensus 280 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~ 359 (640)
|++++..|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+++..+.. ....++.+..+++.+|+|.
T Consensus 438 n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~----~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 438 NMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDG----VFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp SCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTT----STTTCTTCCCEECCSCCBC
T ss_pred CCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHH----HHhcCCCCCEEEecCCCcC
Confidence 999887777665 68999999999998 5666666999999999999999844322 1345678889999999999
Q ss_pred cCCC
Q 035691 360 CGGI 363 (640)
Q Consensus 360 c~~~ 363 (640)
|.++
T Consensus 511 c~c~ 514 (562)
T 3a79_B 511 CTCP 514 (562)
T ss_dssp CCHH
T ss_pred CCcc
Confidence 9765
No 20
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.3e-40 Score=364.04 Aligned_cols=344 Identities=18% Similarity=0.175 Sum_probs=243.0
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
++|++|||++|+|++..|..|.++++|++|+|++|++++..|.+|.++++|++|||++|+++. +|+..+..+++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~------~~~~~~~~l~~ 99 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSS------LSSSWFGPLSS 99 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCS------CCHHHHTTCTT
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCc------cCHHHhccCCC
Confidence 479999999999999999999999999999999999999889999999999999999999986 88887778999
Q ss_pred CCeeeccCCccccc-CCccCcCCCCCCEEECcCCc-cCccCCccccCCCCCCEEEcccCcCCCCCCCccccccc------
Q 035691 83 IRIPLLAGNQFFGN-IPHSISNASKLEWLDFANNS-LTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDS------ 154 (640)
Q Consensus 83 L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~------ 154 (640)
|+.|+|++|++++. .|..|+++++|++|++++|+ ++.+.+..|.++++|++|++++|++++..+..+.....
T Consensus 100 L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 179 (549)
T 2z81_A 100 LKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179 (549)
T ss_dssp CCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEE
T ss_pred CcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEec
Confidence 99999999999974 57789999999999999998 56555578999999999999999998753332211110
Q ss_pred ------------ccCCCCcceEecCCCCCCCcC---cCC-CCC-------------------------------------
Q 035691 155 ------------LVNCTYLEIVSLNVNSLRSIP---ISV-GYL------------------------------------- 181 (640)
Q Consensus 155 ------------l~~l~~L~~L~L~~N~l~~ip---~~~-~~l------------------------------------- 181 (640)
+..+++|++|++++|+++.++ ..+ ..+
T Consensus 180 ~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~ 259 (549)
T 2z81_A 180 HLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFD 259 (549)
T ss_dssp ECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEE
T ss_pred ccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccc
Confidence 124677888888888777642 111 011
Q ss_pred --------------------------------------------------CCCCEEEccCCcCcccCCcCc-cCCCCCCE
Q 035691 182 --------------------------------------------------PKLQVLSLFENNISGEIPSSL-GNFTFLTE 210 (640)
Q Consensus 182 --------------------------------------------------~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~ 210 (640)
++|++|++++|.+. .+|..+ ..+++|++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~ 338 (549)
T 2z81_A 260 DCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEF 338 (549)
T ss_dssp SCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCE
T ss_pred cccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccE
Confidence 23444444444444 234333 45777778
Q ss_pred EEccCCCCCCCCC---ccccCCCCccEEeccCcccc----------CCCCCceEEccCCcCCCCCCccCCCCCCCCEEEC
Q 035691 211 LNLRGNSIRGSIP---SALGNCHQLQSLDLSKTIFL----------GQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDL 277 (640)
Q Consensus 211 L~L~~N~l~~~~~---~~~~~l~~L~~L~ls~n~~~----------~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 277 (640)
|+|++|++.+..| ..++.+++|+.|++++|.+. .+..|++|++++|+++ .+|..+..+++|++|+|
T Consensus 339 L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~L 417 (549)
T 2z81_A 339 LDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNL 417 (549)
T ss_dssp EECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEEC
T ss_pred EEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEEC
Confidence 8888887776553 33667777888888777653 2345777888888877 56667777777777777
Q ss_pred CCCcccCcCCccc------------------cCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCccc
Q 035691 278 SKNKLSGEIPSSL------------------GSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDV 339 (640)
Q Consensus 278 s~N~l~~~~p~~~------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 339 (640)
++|+|+. +|..+ ..+++|++|+|++|+|+ .+|. ...+++|++|||++|+++ +..
T Consensus 418 s~N~l~~-l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~-----~~~ 489 (549)
T 2z81_A 418 SSTGIRV-VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLK-----SVP 489 (549)
T ss_dssp TTSCCSC-CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCC-----CCC
T ss_pred CCCCccc-ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccC-----CcC
Confidence 7777763 33322 14555556666666555 2333 244556666666666665 222
Q ss_pred CC-CCCCCCCccccccCCCCCcCC
Q 035691 340 PR-KGIFKNASAISVAGNEKLCGG 362 (640)
Q Consensus 340 p~-~~~~~~~~~~~~~~n~~~c~~ 362 (640)
|. ...++.+..+++++|+|.|..
T Consensus 490 ~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 490 DGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp TTGGGGCTTCCEEECCSSCBCCCH
T ss_pred HHHHhcCcccCEEEecCCCccCCC
Confidence 22 134556666677777766644
No 21
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.6e-39 Score=356.51 Aligned_cols=327 Identities=18% Similarity=0.230 Sum_probs=259.9
Q ss_pred CcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCC
Q 035691 5 LMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIR 84 (640)
Q Consensus 5 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~ 84 (640)
.+++|+++|++++ +|..+. ++|++|+|++|.|++..|.+|.++++|++|+|++|+|+. +++..|..+++|+
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~------~~~~~~~~l~~L~ 103 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS------LDFHVFLFNQDLE 103 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCE------ECTTTTTTCTTCC
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCc------CCHHHhCCCCCCC
Confidence 4789999999995 776664 899999999999998888999999999999999999985 7777777899999
Q ss_pred eeeccCCcccccCCccCcCCCCCCEEECcCCccCcc-CCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcce
Q 035691 85 IPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTAS-IPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEI 163 (640)
Q Consensus 85 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~ 163 (640)
.|+|++|+|+.+ |.. .+++|++|+|++|++++. .|..|+++++|++|+|++|+++.. ....+.++ +|++
T Consensus 104 ~L~Ls~N~l~~l-p~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~------~~~~l~~L-~L~~ 173 (562)
T 3a79_B 104 YLDVSHNRLQNI-SCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL------DLLPVAHL-HLSC 173 (562)
T ss_dssp EEECTTSCCCEE-CSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT------TTGGGTTS-CEEE
T ss_pred EEECCCCcCCcc-Ccc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC------chhhhhhc-eeeE
Confidence 999999999965 444 899999999999999974 368999999999999999999764 22233333 4499
Q ss_pred EecCCCCC--CC-cCcCCCCCC----------------------------------------------------------
Q 035691 164 VSLNVNSL--RS-IPISVGYLP---------------------------------------------------------- 182 (640)
Q Consensus 164 L~L~~N~l--~~-ip~~~~~l~---------------------------------------------------------- 182 (640)
|++++|.+ +. .|..+..+.
T Consensus 174 L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~ 253 (562)
T 3a79_B 174 ILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLN 253 (562)
T ss_dssp EEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEE
T ss_pred EEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceE
Confidence 99999988 44 343333222
Q ss_pred -----------------------CCCEEEccCCcCcccCCcCc-----cCCC--------------------------CC
Q 035691 183 -----------------------KLQVLSLFENNISGEIPSSL-----GNFT--------------------------FL 208 (640)
Q Consensus 183 -----------------------~L~~L~L~~N~l~~~~p~~~-----~~l~--------------------------~L 208 (640)
+|++|++++|.+++.+|..+ ..++ +|
T Consensus 254 L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L 333 (562)
T 3a79_B 254 VTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNI 333 (562)
T ss_dssp EEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCC
T ss_pred EEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcc
Confidence 67777777777777777665 3333 35
Q ss_pred CEEEccCCCCCCCCCccccCCCCccEEeccCccccC--------CCCCceEEccCCcCCCCC--CccCCCCCCCCEEECC
Q 035691 209 TELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG--------QYPVRWLDLSHNHLTGPI--PLAVGNLKSIPHLDLS 278 (640)
Q Consensus 209 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~--------~~~l~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls 278 (640)
++|++++|.+.... .+..+++|+.|++++|.+.+ +..|++|+|++|++++.. |..|..+++|+.|+|+
T Consensus 334 ~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~ 411 (562)
T 3a79_B 334 KMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVS 411 (562)
T ss_dssp SEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECT
T ss_pred eEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECC
Confidence 55666666554221 12788999999999998765 445899999999999744 5679999999999999
Q ss_pred CCcccCcCC-ccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCC
Q 035691 279 KNKLSGEIP-SSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNE 357 (640)
Q Consensus 279 ~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~ 357 (640)
+|++++.+| ..|..+++|++|+|++|++++..|..+. ++|++|+|++|.++..+.. ...++.+..+++.+|.
T Consensus 412 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~-----~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 412 LNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKD-----VTHLQALQELNVASNQ 484 (562)
T ss_dssp TSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTT-----TTSSCCCSEEECCSSC
T ss_pred CCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChh-----hcCCCCCCEEECCCCC
Confidence 999998455 4688999999999999999887776654 7999999999999843221 2456788999999997
Q ss_pred CC
Q 035691 358 KL 359 (640)
Q Consensus 358 ~~ 359 (640)
..
T Consensus 485 l~ 486 (562)
T 3a79_B 485 LK 486 (562)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 22
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=350.98 Aligned_cols=323 Identities=22% Similarity=0.169 Sum_probs=270.3
Q ss_pred cEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCe
Q 035691 6 MLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRI 85 (640)
Q Consensus 6 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~ 85 (640)
+.++.++++++ .+|..+. +++++|+|++|+|++..+..|.++++|++|+|++|.|+. +++..|..+++|+.
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~------~~~~~~~~l~~L~~ 84 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSA------VEPGAFNNLFNLRT 84 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCE------ECTTTTTTCTTCCE
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCE------eChhhhhCCccCCE
Confidence 56788888888 5665553 578899999999988888889999999999999888875 65666667889999
Q ss_pred eeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEe
Q 035691 86 PLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVS 165 (640)
Q Consensus 86 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~ 165 (640)
|+|++|+++++.+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.++.+ .+..|.++++|+.|+
T Consensus 85 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~------~~~~~~~l~~L~~L~ 158 (477)
T 2id5_A 85 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYI------SHRAFSGLNSLEQLT 158 (477)
T ss_dssp EECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEE------CTTSSTTCTTCCEEE
T ss_pred EECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCcccee------ChhhccCCCCCCEEE
Confidence 99999998887777888889999999999999888888888889999999999988876 345677888888888
Q ss_pred cCCCCCCCcCc-CCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccC
Q 035691 166 LNVNSLRSIPI-SVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG 244 (640)
Q Consensus 166 L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~ 244 (640)
+++|.++.+|. .+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|..+....+|+.|
T Consensus 159 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L--------- 229 (477)
T 2id5_A 159 LEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSL--------- 229 (477)
T ss_dssp EESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEE---------
T ss_pred CCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEE---------
Confidence 88888888765 46778888888888888888888888888888888888888776666655555566666
Q ss_pred CCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEe
Q 035691 245 QYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLD 324 (640)
Q Consensus 245 ~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 324 (640)
+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 230 -------~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 302 (477)
T 2id5_A 230 -------SITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLN 302 (477)
T ss_dssp -------EEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEE
T ss_pred -------ECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEE
Confidence 8889999976667899999999999999999988888999999999999999999999999999999999999
Q ss_pred CcCCccccccCCcccCCCCCCCCCccccccCCCCCcCCC
Q 035691 325 LFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLCGGI 363 (640)
Q Consensus 325 l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 363 (640)
|++|.++...... ...++++..+++.+|+|.|.+.
T Consensus 303 L~~N~l~~~~~~~----~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 303 VSGNQLTTLEESV----FHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp CCSSCCSCCCGGG----BSCGGGCCEEECCSSCEECSGG
T ss_pred CCCCcCceeCHhH----cCCCcccCEEEccCCCccCccc
Confidence 9999998543211 1346788999999999999754
No 23
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8.9e-39 Score=362.70 Aligned_cols=344 Identities=22% Similarity=0.171 Sum_probs=243.0
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
++|++|+|++|+|++..+..|.++++|++|+|++|.+++..|.+|.++++|++|+|++|+|+. +|+..+..+++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------l~~~~~~~l~~ 98 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQ------LSDKTFAFCTN 98 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCC------CCTTTTTTCTT
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCc------cChhhhccCCC
Confidence 357778888888877666677778888888888888777777777777888888887777765 77766666777
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccc-----------
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRF----------- 151 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----------- 151 (640)
|+.|+|++|+++++.|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.++.++...+..
T Consensus 99 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 178 (680)
T 1ziw_A 99 LTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178 (680)
T ss_dssp CSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEEC
T ss_pred CCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEEC
Confidence 777777777777777777777777777777777777777777777777777777777776653221110
Q ss_pred ---------cccccC---------------------------CCCcceEecCCCCCCCc-CcCCCCCC--CCCEEEccCC
Q 035691 152 ---------LDSLVN---------------------------CTYLEIVSLNVNSLRSI-PISVGYLP--KLQVLSLFEN 192 (640)
Q Consensus 152 ---------~~~l~~---------------------------l~~L~~L~L~~N~l~~i-p~~~~~l~--~L~~L~L~~N 192 (640)
+..+.. .++|+.|++++|.++.+ |..+..++ +|++|+|++|
T Consensus 179 ~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n 258 (680)
T 1ziw_A 179 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYN 258 (680)
T ss_dssp TTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTS
T ss_pred CCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCC
Confidence 001111 13445555555555552 33444443 3888888888
Q ss_pred cCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcc-----------------ccCCCCCceEEccC
Q 035691 193 NISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTI-----------------FLGQYPVRWLDLSH 255 (640)
Q Consensus 193 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~-----------------~~~~~~l~~L~Ls~ 255 (640)
.+++..|..|..+++|++|+|++|++.+..|.+|.++++|+.|++++|. |..+..|++|++++
T Consensus 259 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~ 338 (680)
T 1ziw_A 259 NLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMED 338 (680)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCS
T ss_pred CcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCC
Confidence 8887777888888888888888888888888888888888888887652 33456688899999
Q ss_pred CcCCCCCCccCCCCCCCCEEECCCCcccC--cCCccccCC--CCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccc
Q 035691 256 NHLTGPIPLAVGNLKSIPHLDLSKNKLSG--EIPSSLGSC--VGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQ 331 (640)
Q Consensus 256 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 331 (640)
|++++..+..|.++++|++|++++|.++. ..+..|..+ ++|+.|++++|++++..|..|..+++|++|++++|.+.
T Consensus 339 n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 418 (680)
T 1ziw_A 339 NDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIG 418 (680)
T ss_dssp CCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCE
T ss_pred CccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCc
Confidence 99998888888888888888888887532 222333332 46777777888887777777888888888888888776
Q ss_pred cccCCcccCC--CCCCCCCccccccCCC
Q 035691 332 AKSQNGDVPR--KGIFKNASAISVAGNE 357 (640)
Q Consensus 332 ~~~~~~~~p~--~~~~~~~~~~~~~~n~ 357 (640)
+.+|. ...++++..+++++|.
T Consensus 419 -----~~~~~~~~~~l~~L~~L~Ls~n~ 441 (680)
T 1ziw_A 419 -----QELTGQEWRGLENIFEIYLSYNK 441 (680)
T ss_dssp -----EECCSGGGTTCTTCCEEECCSCS
T ss_pred -----cccCcccccCcccccEEecCCCC
Confidence 33331 1345566677777765
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.8e-39 Score=359.64 Aligned_cols=334 Identities=22% Similarity=0.224 Sum_probs=276.9
Q ss_pred CCCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCC
Q 035691 1 NLTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTL 80 (640)
Q Consensus 1 nl~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l 80 (640)
+|++|++|||++|+|+++.|.+|.++++|++|+|++|+|++..+.+|.++++|++|+|++|+|+. +|+..|..+
T Consensus 74 ~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~------l~~~~~~~L 147 (635)
T 4g8a_A 74 SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS------LENFPIGHL 147 (635)
T ss_dssp TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCC------STTCCCTTC
T ss_pred CCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCC------CChhhhhcC
Confidence 47899999999999998888999999999999999999998888899999999999999999986 888888889
Q ss_pred CCCCeeeccCCccccc-CCccCcCCCCCCEEECcCCccCccCCccccCCCC-----------------------------
Q 035691 81 PNIRIPLLAGNQFFGN-IPHSISNASKLEWLDFANNSLTASIPEDLGRLRN----------------------------- 130 (640)
Q Consensus 81 ~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~----------------------------- 130 (640)
++|+.|+|++|++++. .|..++.+++|++|+|++|+|+++.+..|..+.+
T Consensus 148 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~ 227 (635)
T 4g8a_A 148 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLH 227 (635)
T ss_dssp TTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEE
T ss_pred cccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhh
Confidence 9999999999999864 5788899999999999999998776655443222
Q ss_pred --------------------------------------------------------------------------------
Q 035691 131 -------------------------------------------------------------------------------- 130 (640)
Q Consensus 131 -------------------------------------------------------------------------------- 130 (640)
T Consensus 228 ~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (635)
T 4g8a_A 228 KLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTN 307 (635)
T ss_dssp EEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTT
T ss_pred hhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcc
Confidence
Q ss_pred ----------------------CCEEEcccCcCCCCCCCcccc-------------cccccCCCCcceEecCCCCCCC--
Q 035691 131 ----------------------LTRLNFARNDLGTRKVNDLRF-------------LDSLVNCTYLEIVSLNVNSLRS-- 173 (640)
Q Consensus 131 ----------------------L~~L~L~~N~l~~~~~~~~~~-------------~~~l~~l~~L~~L~L~~N~l~~-- 173 (640)
|+.|++++|.+..++...+.. .....++++|+.|+++.|.+..
T Consensus 308 l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~ 387 (635)
T 4g8a_A 308 VSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKG 387 (635)
T ss_dssp CSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEE
T ss_pred cccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhcccccccc
Confidence 223333333332221111100 1122346777778877777643
Q ss_pred ------------------------cCcCCCCCCCCCEEEccCCcCcccCC-cCccCCCCCCEEEccCCCCCCCCCccccC
Q 035691 174 ------------------------IPISVGYLPKLQVLSLFENNISGEIP-SSLGNFTFLTELNLRGNSIRGSIPSALGN 228 (640)
Q Consensus 174 ------------------------ip~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 228 (640)
++..+..+++|+.++++.|.+....+ ..|..+++++.+++++|.+.+..+..+..
T Consensus 388 ~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~ 467 (635)
T 4g8a_A 388 CCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 467 (635)
T ss_dssp ECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred ccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 23345667889999999887765544 56889999999999999999999999999
Q ss_pred CCCccEEeccCccc---------cCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeE
Q 035691 229 CHQLQSLDLSKTIF---------LGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYL 299 (640)
Q Consensus 229 l~~L~~L~ls~n~~---------~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 299 (640)
+++|+.|++++|.+ ..+..|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|
T Consensus 468 ~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred chhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 99999999999853 345679999999999999999999999999999999999999999999999999999
Q ss_pred EecCCccCCCCCccCCCC-CCCCeEeCcCCccccccCCcccC
Q 035691 300 NLSINSFHGPIHPGLSSL-KSLEGLDLFQNTFQAKSQNGDVP 340 (640)
Q Consensus 300 ~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~p 340 (640)
||++|+|++..|..|..+ ++|++|+|++|+|.|.|...+..
T Consensus 548 ~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~ 589 (635)
T 4g8a_A 548 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFL 589 (635)
T ss_dssp ECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHH
T ss_pred ECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHH
Confidence 999999999999999998 68999999999999999765443
No 25
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-38 Score=336.52 Aligned_cols=327 Identities=21% Similarity=0.211 Sum_probs=265.6
Q ss_pred CCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCC
Q 035691 2 LTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLP 81 (640)
Q Consensus 2 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~ 81 (640)
+++++.|++++|.++...+..|..+++|++|++++|.+++..+..|..+++|++|+|++|+++. +|+..+..++
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~ 117 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY------LPPHVFQNVP 117 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC------CCTTTTTTCT
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCc------CCHHHhcCCC
Confidence 5789999999999997777778999999999999999998888899999999999999999986 7878778899
Q ss_pred CCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCc
Q 035691 82 NIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYL 161 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 161 (640)
+|+.|+|++|+++.+.+..|.++++|++|+|++|++++..|..|..+++|++|+|++|+++.++ +..+++|
T Consensus 118 ~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---------~~~l~~L 188 (390)
T 3o6n_A 118 LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---------LSLIPSL 188 (390)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---------GGGCTTC
T ss_pred CCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---------ccccccc
Confidence 9999999999999877777899999999999999999988899999999999999999998762 4556889
Q ss_pred ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcc
Q 035691 162 EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTI 241 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~ 241 (640)
+.|++++|.++.++. .++|++|++++|.+... |..+ .++|+.|++++|.+++. ..+..+++|+.|++++|.
T Consensus 189 ~~L~l~~n~l~~~~~----~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~ 259 (390)
T 3o6n_A 189 FHANVSYNLLSTLAI----PIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNE 259 (390)
T ss_dssp SEEECCSSCCSEEEC----CSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred ceeecccccccccCC----CCcceEEECCCCeeeec-cccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCc
Confidence 999999999887542 35789999999999855 3332 47899999999999854 578889999999888776
Q ss_pred cc--------CCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCcc
Q 035691 242 FL--------GQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPG 313 (640)
Q Consensus 242 ~~--------~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 313 (640)
+. .+..|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+++...
T Consensus 260 l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--- 334 (390)
T 3o6n_A 260 LEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--- 334 (390)
T ss_dssp CCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---
T ss_pred CCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---
Confidence 54 33457778888888874 5566677888888888888887 56666777888888888888887542
Q ss_pred CCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCCCcCCC
Q 035691 314 LSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLCGGI 363 (640)
Q Consensus 314 ~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 363 (640)
+..+++|++|++++|+|.|.+..... ..+....+.+++..|..+
T Consensus 335 ~~~~~~L~~L~l~~N~~~~~~~~~~~------~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 335 LSTHHTLKNLTLSHNDWDCNSLRALF------RNVARPAVDDADQHCKID 378 (390)
T ss_dssp CCTTCCCSEEECCSSCEEHHHHHHHT------TTCCTTTBCCCCSCCCTT
T ss_pred chhhccCCEEEcCCCCccchhHHHHH------HHHHhhcccccCceeccc
Confidence 66778888888888888876543322 233334455666666543
No 26
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-38 Score=353.93 Aligned_cols=330 Identities=21% Similarity=0.210 Sum_probs=276.7
Q ss_pred CCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCC
Q 035691 2 LTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLP 81 (640)
Q Consensus 2 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~ 81 (640)
+++++.|++++|.+....+..|..+++|++|+|++|.|++..|..|..+++|++|+|++|.|+. +|+..+..++
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~ 123 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY------LPPHVFQNVP 123 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC------CCTTTTTTCT
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCC------CCHHHHcCCC
Confidence 5788999999999998777889999999999999999998888899999999999999999886 8888888899
Q ss_pred CCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCc
Q 035691 82 NIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYL 161 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 161 (640)
+|+.|+|++|.|+++.+..|+++++|++|+|++|.|++..|..|.++++|++|+|++|.++.++ +..+++|
T Consensus 124 ~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---------~~~l~~L 194 (597)
T 3oja_B 124 LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---------LSLIPSL 194 (597)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---------GGGCTTC
T ss_pred CCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---------hhhhhhh
Confidence 9999999999999888888999999999999999999999999999999999999999998763 4456789
Q ss_pred ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcc
Q 035691 162 EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTI 241 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~ 241 (640)
+.|++++|.++.++ ..++|+.|++++|.+....+. + .++|+.|+|++|.+++ +..+..+++|+.|+|++|.
T Consensus 195 ~~L~l~~n~l~~l~----~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~ 265 (597)
T 3oja_B 195 FHANVSYNLLSTLA----IPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNE 265 (597)
T ss_dssp SEEECCSSCCSEEE----CCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSC
T ss_pred hhhhcccCcccccc----CCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCc
Confidence 99999999888754 235789999999998854433 3 2689999999999885 3678889999999888886
Q ss_pred ccC--------CCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCcc
Q 035691 242 FLG--------QYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPG 313 (640)
Q Consensus 242 ~~~--------~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 313 (640)
+.+ +..|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++..
T Consensus 266 l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--- 340 (597)
T 3oja_B 266 LEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--- 340 (597)
T ss_dssp CCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---
T ss_pred cCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---
Confidence 543 4457888999999985 5677788999999999999998 67778888999999999999998653
Q ss_pred CCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCCCcCCCcCC
Q 035691 314 LSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLCGGISEL 366 (640)
Q Consensus 314 ~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~ 366 (640)
+..+++|+.|++++|+|.|.+...+ +..+....+.+++..|+.+...
T Consensus 341 ~~~~~~L~~L~l~~N~~~~~~~~~~------~~~~~~~~~~~~~~~C~~~~~~ 387 (597)
T 3oja_B 341 LSTHHTLKNLTLSHNDWDCNSLRAL------FRNVARPAVDDADQHCKIDYQL 387 (597)
T ss_dssp CCTTCCCSEEECCSSCEEHHHHHHH------TTTCCTTTBCCCCCCCCTTCEE
T ss_pred hhhcCCCCEEEeeCCCCCChhHHHH------HHHHhhhccccccccCCcchhc
Confidence 6778899999999999987664332 3334444567777888765443
No 27
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.3e-38 Score=350.19 Aligned_cols=323 Identities=20% Similarity=0.185 Sum_probs=243.1
Q ss_pred CCCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCC
Q 035691 1 NLTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTL 80 (640)
Q Consensus 1 nl~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l 80 (640)
++++|++|+|++|+|++..|.+|.++++|++|+|++|++++..|..|.++++|++|||++|+++... +|. .+..+
T Consensus 48 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~----~~~-~~~~l 122 (549)
T 2z81_A 48 ACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLG----VTS-LFPNL 122 (549)
T ss_dssp SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSC----SSC-SCTTC
T ss_pred cCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccc----hhh-hhhcc
Confidence 4678899999999998888888999999999999999998777777888999999999988876411 122 23346
Q ss_pred CCCCeeeccCCc-ccccCCccCcCCCCCCEEECcCCccCccCCcccc------------------------CCCCCCEEE
Q 035691 81 PNIRIPLLAGNQ-FFGNIPHSISNASKLEWLDFANNSLTASIPEDLG------------------------RLRNLTRLN 135 (640)
Q Consensus 81 ~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~------------------------~l~~L~~L~ 135 (640)
++|+.|+|++|+ +....+..|.++++|++|++++|++++..|..|. .+++|++|+
T Consensus 123 ~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 202 (549)
T 2z81_A 123 TNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLE 202 (549)
T ss_dssp TTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEE
T ss_pred CCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEE
Confidence 666666666666 3333345666666666666666666665555543 356777777
Q ss_pred cccCcCCCCCCCccc-----------------------------------------------------------------
Q 035691 136 FARNDLGTRKVNDLR----------------------------------------------------------------- 150 (640)
Q Consensus 136 L~~N~l~~~~~~~~~----------------------------------------------------------------- 150 (640)
|++|++++.+.....
T Consensus 203 L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~ 282 (549)
T 2z81_A 203 LRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGK 282 (549)
T ss_dssp EESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTT
T ss_pred ccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcc
Confidence 777777664210000
Q ss_pred ------------------------------------------ccccc-cCCCCcceEecCCCCCCC-cC---cCCCCCCC
Q 035691 151 ------------------------------------------FLDSL-VNCTYLEIVSLNVNSLRS-IP---ISVGYLPK 183 (640)
Q Consensus 151 ------------------------------------------~~~~l-~~l~~L~~L~L~~N~l~~-ip---~~~~~l~~ 183 (640)
.+..+ .++++|++|++++|+++. +| ..+..+++
T Consensus 283 L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~ 362 (549)
T 2z81_A 283 VETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPS 362 (549)
T ss_dssp CCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTT
T ss_pred cccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhcccc
Confidence 01111 346778888888888876 33 23567788
Q ss_pred CCEEEccCCcCcccCC--cCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCC-----CCCceEEccCC
Q 035691 184 LQVLSLFENNISGEIP--SSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQ-----YPVRWLDLSHN 256 (640)
Q Consensus 184 L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~-----~~l~~L~Ls~N 256 (640)
|++|+|++|.+++..+ ..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|.+... ..|++|+|++|
T Consensus 363 L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N 441 (549)
T 2z81_A 363 LQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNN 441 (549)
T ss_dssp CCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSS
T ss_pred CcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCC
Confidence 8888888888875433 45788888888888888888 5677888888899999998887643 35889999999
Q ss_pred cCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccC
Q 035691 257 HLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQ 335 (640)
Q Consensus 257 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 335 (640)
+|++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|+|++|++++.+|..|..+++|++|++++|+|.|.+.
T Consensus 442 ~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 442 NLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred Chhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 998643 57899999999999999 6676 5678999999999999999999999999999999999999997664
No 28
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8.5e-40 Score=333.81 Aligned_cols=179 Identities=22% Similarity=0.333 Sum_probs=148.8
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|++.+.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+++|++++|||||++++++ .+++..
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~-----~~~~~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF-----EENGSL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEE-----EECCEE
Confidence 57899999999999999999999999999999996543 34467899999999999999999999995 455689
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
|+|||||+||+|.+++...+. ..+++..+..|+.||+.||+|||+ ++|+||||||+|||++.++.+||+
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~--------~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~ 167 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKG--------VLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLG 167 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTT--------CCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEEC
T ss_pred EEEEeCCCCCcHHHHHHHcCC--------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEc
Confidence 999999999999999964432 237888999999999999999999 799999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|||+|+.+... .....+.+||+.|||||++.+..|+.
T Consensus 168 DFGla~~~~~~----~~~~~~~~GT~~YmAPE~l~~~~y~~ 204 (350)
T 4b9d_A 168 DFGIARVLNST----VELARACIGTPYYLSPEICENKPYNN 204 (350)
T ss_dssp STTEESCCCHH----HHHHHHHHSCCTTCCHHHHTTCCCCH
T ss_pred ccccceeecCC----cccccccCCCccccCHHHHCCCCCCc
Confidence 99999976421 11223467999999999999988874
No 29
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1e-39 Score=332.61 Aligned_cols=177 Identities=24% Similarity=0.318 Sum_probs=155.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeE
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKAL 520 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~l 520 (640)
+.|+..+.||+|+||+||+|+++.+|+.||||+++.......+.+.+|+++|++++|||||++++++ .+++..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEEE
Confidence 4588889999999999999999999999999999776666667789999999999999999999995 44568999
Q ss_pred EeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEccc
Q 035691 521 VYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGDF 600 (640)
Q Consensus 521 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~Df 600 (640)
|||||+||+|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.+|.+||+||
T Consensus 149 vmEy~~gg~L~~~l~~~-----------~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DF 214 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHT-----------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDF 214 (346)
T ss_dssp EECCCTTEEHHHHHHHS-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecC
Confidence 99999999999998632 27889999999999999999999 69999999999999999999999999
Q ss_pred cccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 601 GLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 601 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|+|+.+.... ....+.+||+.|||||++.+..|+.+
T Consensus 215 Gla~~~~~~~----~~~~~~~GTp~YmAPEvl~~~~y~~~ 250 (346)
T 4fih_A 215 GFCAQVSKEV----PRRKSLVGTPYWMAPELISRLPYGPE 250 (346)
T ss_dssp TTCEECCSSS----CCBCCCCSCGGGCCHHHHTTCCBCTH
T ss_pred cCceecCCCC----CcccccccCcCcCCHHHHCCCCCCcH
Confidence 9998764321 12334689999999999999888753
No 30
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=349.44 Aligned_cols=156 Identities=24% Similarity=0.269 Sum_probs=138.2
Q ss_pred CcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCC
Q 035691 5 LMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIR 84 (640)
Q Consensus 5 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~ 84 (640)
.+.++.++.+++ .+|..+. +++++|+|++|.++++.+.+|.++++|++|||++|+|+. +++..|..+++|+
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~------i~~~~~~~l~~L~ 79 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT------IEDGAYQSLSHLS 79 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCE------ECTTTTTTCTTCC
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCc------cCcccccCchhCC
Confidence 456888888888 6776553 579999999999998889999999999999999999875 8888888899999
Q ss_pred eeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceE
Q 035691 85 IPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIV 164 (640)
Q Consensus 85 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L 164 (640)
.|+|++|++++..|..|.++++|++|++++|++++..+..|+++++|++|+|++|.++.+. .+..+.++++|++|
T Consensus 80 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~-----lp~~~~~l~~L~~L 154 (570)
T 2z63_A 80 TLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK-----LPEYFSNLTNLEHL 154 (570)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCC-----CCGGGGGCTTCCEE
T ss_pred EEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceec-----ChhhhcccCCCCEE
Confidence 9999999999999999999999999999999999877778999999999999999998753 35678888889999
Q ss_pred ecCCCCCCCc
Q 035691 165 SLNVNSLRSI 174 (640)
Q Consensus 165 ~L~~N~l~~i 174 (640)
++++|.++.+
T Consensus 155 ~l~~n~l~~~ 164 (570)
T 2z63_A 155 DLSSNKIQSI 164 (570)
T ss_dssp ECTTSCCCEE
T ss_pred eCcCCcccee
Confidence 9888887764
No 31
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=9.2e-38 Score=361.75 Aligned_cols=277 Identities=22% Similarity=0.169 Sum_probs=213.7
Q ss_pred CCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCcc-CCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCC
Q 035691 2 LTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQ-IPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTL 80 (640)
Q Consensus 2 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l 80 (640)
.++|+.|||++|.|++..|..|.++++|++|+|++|.+.+. .|.+|.++++|++|+|++|.|+. +++..+..+
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~------~~p~~~~~l 96 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYF------LHPDAFQGL 96 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCE------ECTTSSCSC
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcc------cCHhHccCC
Confidence 46899999999999999999999999999999999965544 48899999999999999999875 666677789
Q ss_pred CCCCeeeccCCcccccCCcc--CcCCCCCCEEECcCCccCccCC-ccccCCCCCCEEEcccCcCCCCCCCccccc-----
Q 035691 81 PNIRIPLLAGNQFFGNIPHS--ISNASKLEWLDFANNSLTASIP-EDLGRLRNLTRLNFARNDLGTRKVNDLRFL----- 152 (640)
Q Consensus 81 ~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~----- 152 (640)
++|+.|+|++|.+++..|.. |.++++|++|||++|.+++..+ ..|+++++|++|+|++|.++......+...
T Consensus 97 ~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L 176 (844)
T 3j0a_A 97 FHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTL 176 (844)
T ss_dssp SSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSS
T ss_pred cccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCcc
Confidence 99999999999999866655 9999999999999999998765 579999999999999999987644332211
Q ss_pred ---------------ccccCCCC------cceEecCCCCCCC-cCcCC--------------------------------
Q 035691 153 ---------------DSLVNCTY------LEIVSLNVNSLRS-IPISV-------------------------------- 178 (640)
Q Consensus 153 ---------------~~l~~l~~------L~~L~L~~N~l~~-ip~~~-------------------------------- 178 (640)
..+..+.+ |+.|++++|.++. +|..+
T Consensus 177 ~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~ 256 (844)
T 3j0a_A 177 SFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPD 256 (844)
T ss_dssp CCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGG
T ss_pred ceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCC
Confidence 11122222 6677777775543 22111
Q ss_pred ----CC--CCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccC--------
Q 035691 179 ----GY--LPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG-------- 244 (640)
Q Consensus 179 ----~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~-------- 244 (640)
.. .++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|.+|.++++|+.|++++|.+.+
T Consensus 257 ~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 336 (844)
T 3j0a_A 257 QNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYG 336 (844)
T ss_dssp GTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSS
T ss_pred hhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcC
Confidence 11 2567777777777777777777777777888887777777777777777778888777776543
Q ss_pred CCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccC
Q 035691 245 QYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSG 284 (640)
Q Consensus 245 ~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 284 (640)
+..|++|++++|++++..+..|.++++|+.|+|++|.+++
T Consensus 337 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 337 LPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp CTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 3347777787777777777777777777777777777763
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=345.57 Aligned_cols=315 Identities=18% Similarity=0.179 Sum_probs=256.4
Q ss_pred CCCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCC
Q 035691 1 NLTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTL 80 (640)
Q Consensus 1 nl~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l 80 (640)
++++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|||++|+|+.. .+|. .+..+
T Consensus 43 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~----~~p~-~~~~l 114 (520)
T 2z7x_B 43 SLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDAL----PICK-EFGNM 114 (520)
T ss_dssp TCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSC----CCCG-GGGGC
T ss_pred ccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccc----cchh-hhccC
Confidence 4789999999999999988999999999999999999999 45554 899999999999998751 1344 44569
Q ss_pred CCCCeeeccCCcccccCCccCcCCCCC--CEEECcCCcc--CccCCccccCCC---------------------------
Q 035691 81 PNIRIPLLAGNQFFGNIPHSISNASKL--EWLDFANNSL--TASIPEDLGRLR--------------------------- 129 (640)
Q Consensus 81 ~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~Ls~N~l--~~~~~~~~~~l~--------------------------- 129 (640)
++|+.|+|++|+|++ ..|..+++| ++|+|++|++ ++..|..|..+.
T Consensus 115 ~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~ 191 (520)
T 2z7x_B 115 SQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVAN 191 (520)
T ss_dssp TTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSE
T ss_pred CcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccc
Confidence 999999999999986 456677777 8899988888 666666655533
Q ss_pred --------------------------------------------------------CCCEEEcccCcCCCCCCCcccccc
Q 035691 130 --------------------------------------------------------NLTRLNFARNDLGTRKVNDLRFLD 153 (640)
Q Consensus 130 --------------------------------------------------------~L~~L~L~~N~l~~~~~~~~~~~~ 153 (640)
+|++|++++|++++. .+.
T Consensus 192 L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~------~p~ 265 (520)
T 2z7x_B 192 LELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQ------LDF 265 (520)
T ss_dssp EEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESC------CCC
T ss_pred eeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCc------ccc
Confidence 566666677766632 222
Q ss_pred cc-----cCCCCc--------------------------ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCc
Q 035691 154 SL-----VNCTYL--------------------------EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSL 202 (640)
Q Consensus 154 ~l-----~~l~~L--------------------------~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~ 202 (640)
.+ .++++| +.|++++|.+..++. ...+++|++|++++|.+++..|..+
T Consensus 266 ~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~ 344 (520)
T 2z7x_B 266 RDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLC-PSKISPFLHLDFSNNLLTDTVFENC 344 (520)
T ss_dssp CCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCC-CSSCCCCCEEECCSSCCCTTTTTTC
T ss_pred chhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccc-hhhCCcccEEEeECCccChhhhhhh
Confidence 22 444444 445555554444321 2578999999999999999899999
Q ss_pred cCCCCCCEEEccCCCCCC--CCCccccCCCCccEEeccCccccC---------CCCCceEEccCCcCCCCCCccCCCCCC
Q 035691 203 GNFTFLTELNLRGNSIRG--SIPSALGNCHQLQSLDLSKTIFLG---------QYPVRWLDLSHNHLTGPIPLAVGNLKS 271 (640)
Q Consensus 203 ~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~ls~n~~~~---------~~~l~~L~Ls~N~l~~~~~~~~~~l~~ 271 (640)
..+++|++|+|++|++++ .+|..|..+++|+.|++++|.+.+ +..|++|++++|++++..|..+. ++
T Consensus 345 ~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~ 422 (520)
T 2z7x_B 345 GHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PR 422 (520)
T ss_dssp CCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TT
T ss_pred ccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--cc
Confidence 999999999999999997 456789999999999999998765 24589999999999988887765 79
Q ss_pred CCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCC
Q 035691 272 IPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQN 336 (640)
Q Consensus 272 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 336 (640)
|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|++|++++|+++|.|..
T Consensus 423 L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 423 IKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 999999999999 7888888999999999999999965555699999999999999999987754
No 33
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=9.3e-40 Score=327.98 Aligned_cols=179 Identities=25% Similarity=0.382 Sum_probs=155.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||+||+|+++.+|+.||||++... +....+.+.+|+++|++++|||||+++++ +++++.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT-----FQDDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEeCCE
Confidence 4589999999999999999999999999999999643 33455789999999999999999999999 455668
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.|+|||||+||+|.+++...+ .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~----------~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl 173 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIG----------SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 173 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEE
Confidence 999999999999999996533 38899999999999999999999 79999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+|+.+..... .....+.+||+.|||||++.+..++.
T Consensus 174 ~DFGla~~~~~~~~--~~~~~~~~GTp~YmAPEvl~~~~y~~ 213 (311)
T 4aw0_A 174 TDFGTAKVLSPESK--QARANSFVGTAQYVSPELLTEKSACK 213 (311)
T ss_dssp CCCTTCEECCTTTT--CCCBCCCCSCGGGCCHHHHHHSCBCH
T ss_pred EEcCCceecCCCCC--cccccCcccCcccCCHHHHcCCCCCc
Confidence 99999997643221 22234568999999999998887764
No 34
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=334.73 Aligned_cols=177 Identities=24% Similarity=0.318 Sum_probs=155.5
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeE
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKAL 520 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~l 520 (640)
+.|+..+.||+|+||+||+|+++.+|+.||||++........+.+.+|+.+|+.++|||||++++++ .+++..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EECCEEEE
Confidence 4688999999999999999999999999999999776666667899999999999999999999995 44568999
Q ss_pred EeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEccc
Q 035691 521 VYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGDF 600 (640)
Q Consensus 521 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~Df 600 (640)
|||||+||+|.+++... .+++..+..|+.||+.||+|||+ .+||||||||+|||++.+|.+||+||
T Consensus 226 VmEy~~gG~L~~~i~~~-----------~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DF 291 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHT-----------RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDF 291 (423)
T ss_dssp EEECCTTEEHHHHHHHS-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHhcc-----------CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecC
Confidence 99999999999998532 27889999999999999999999 69999999999999999999999999
Q ss_pred cccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 601 GLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 601 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|+|+.+.... ....+.+||+.|||||++.+..|+.+
T Consensus 292 Gla~~~~~~~----~~~~~~~GTp~YmAPEvl~~~~y~~~ 327 (423)
T 4fie_A 292 GFCAQVSKEV----PRRKSLVGTPYWMAPELISRLPYGPE 327 (423)
T ss_dssp TTCEECCSSC----CCBCCCEECTTTCCHHHHTTCCBCTH
T ss_pred ccceECCCCC----ccccccccCcCcCCHHHHCCCCCCcH
Confidence 9998764321 12335679999999999999888753
No 35
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=325.00 Aligned_cols=190 Identities=26% Similarity=0.411 Sum_probs=147.4
Q ss_pred CCCcccCcccccccceEEEEEEC-----CCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILD-----PDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
++|.+.+.||+|+||+||+|+++ .+++.||||+++.......++|.+|+++|++++|||||+++|+|.. .
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-----G 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----C
Confidence 34567789999999999999875 3688999999977666677899999999999999999999999743 3
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCC-----CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeC
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDD-----LNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLD 590 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~-----~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~ 590 (640)
...++|||||++|+|.++++....... .......++|.+++.|+.||+.||+|||+ ++|+||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEEC
Confidence 478999999999999999976433211 11122458999999999999999999999 6999999999999999
Q ss_pred CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 591 NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 591 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
+++.+||+|||+|+....... .......+||+.|||||++.+..+|.|
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~--~~~~~~~~gt~~ymAPE~~~~~~~~~~ 240 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDY--YRVGGRTMLPIRWMPPESILYRKFTTE 240 (329)
T ss_dssp TTTEEEECCCC------------------CCCCGGGCCHHHHTTCCCCHH
T ss_pred CCCcEEEcccccceeccCCCc--ceecCcccccccccChhhhcCCCCCcc
Confidence 999999999999986643211 112234579999999999999988753
No 36
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=8.8e-37 Score=330.13 Aligned_cols=319 Identities=24% Similarity=0.306 Sum_probs=209.0
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
++|+.|++++|.+.. +| .+..+++|++|+|++|.+++..+ |..+++|++|++++|+++. +++ +..+++
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~------~~~--~~~l~~ 113 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD------ITP--LANLTN 113 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC------CGG--GTTCTT
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCcccc------Chh--hcCCCC
Confidence 345555555555552 33 25555555555555555553332 5555555555555555543 332 334555
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCC-------------------ccccCCCCCCEEEcccCcCCC
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIP-------------------EDLGRLRNLTRLNFARNDLGT 143 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-------------------~~~~~l~~L~~L~L~~N~l~~ 143 (640)
|+.|+|++|++++..+ |.++++|++|++++|.+++..+ ..+..+++|++|++++|.++.
T Consensus 114 L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 114 LTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred CCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCC
Confidence 5555555555554322 5555555555555555543211 126667777777777777765
Q ss_pred CCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCC
Q 035691 144 RKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIP 223 (640)
Q Consensus 144 ~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 223 (640)
+ ..+..+++|+.|++++|.++.++. +..+++|++|++++|.+++. ..+..+++|++|++++|.+.+..+
T Consensus 192 ~--------~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 260 (466)
T 1o6v_A 192 I--------SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP 260 (466)
T ss_dssp C--------GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred C--------hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh
Confidence 4 236677778888888888777554 55677788888888887743 357777888888888888876554
Q ss_pred ccccCCCCccEEeccCccccC------CCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCC
Q 035691 224 SALGNCHQLQSLDLSKTIFLG------QYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLE 297 (640)
Q Consensus 224 ~~~~~l~~L~~L~ls~n~~~~------~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 297 (640)
+..+++|+.|++++|.+.+ +..|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+
T Consensus 261 --~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 334 (466)
T 1o6v_A 261 --LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334 (466)
T ss_dssp --GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCC
T ss_pred --hhcCCCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCC
Confidence 7778888888888876544 3457888888888876544 7778888888888888886655 67788888
Q ss_pred eEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCCCc
Q 035691 298 YLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLC 360 (640)
Q Consensus 298 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c 360 (640)
+|++++|++++. ..+..+++|++|++++|+++ +..| ...++.+..+++.+|++..
T Consensus 335 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~-----~~~~-~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 335 RLFFYNNKVSDV--SSLANLTNINWLSAGHNQIS-----DLTP-LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp EEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC-----BCGG-GTTCTTCCEEECCCEEEEC
T ss_pred EeECCCCccCCc--hhhccCCCCCEEeCCCCccC-----ccch-hhcCCCCCEEeccCCcccC
Confidence 888888888764 46778888888888888887 3344 4556677788888887654
No 37
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-36 Score=315.98 Aligned_cols=298 Identities=23% Similarity=0.324 Sum_probs=231.9
Q ss_pred CCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCC
Q 035691 2 LTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLP 81 (640)
Q Consensus 2 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~ 81 (640)
+++|+.|++++|.+.. +| .+..+++|++|++++|++++..+ |..+++|++|+|++|+++. +| .+..++
T Consensus 43 l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~------~~--~~~~l~ 110 (347)
T 4fmz_A 43 LESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD------IS--ALQNLT 110 (347)
T ss_dssp HTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC------CG--GGTTCT
T ss_pred cccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC------ch--HHcCCC
Confidence 5678999999999984 44 48899999999999999985544 8899999999999998875 44 255689
Q ss_pred CCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCc
Q 035691 82 NIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYL 161 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 161 (640)
+|+.|+|++|++++..+ +..+++|++|++++|...... ..+..+++|++|++++|.+...+ .+..+++|
T Consensus 111 ~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~--------~~~~l~~L 179 (347)
T 4fmz_A 111 NLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVT--------PIANLTDL 179 (347)
T ss_dssp TCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCG--------GGGGCTTC
T ss_pred cCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCch--------hhccCCCC
Confidence 99999999999986544 888999999999999666444 44889999999999999988762 27788999
Q ss_pred ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcc
Q 035691 162 EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTI 241 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~ 241 (640)
+.|++++|.++.++. +..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.
T Consensus 180 ~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~ 254 (347)
T 4fmz_A 180 YSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQ 254 (347)
T ss_dssp SEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred CEEEccCCccccccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCc
Confidence 999999999998876 7778999999999999986544 8889999999999999986544 8888999999777775
Q ss_pred ccC------CCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCC
Q 035691 242 FLG------QYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLS 315 (640)
Q Consensus 242 ~~~------~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 315 (640)
+.+ ...|++|++++|++++. ..+..+++|+.|++++|++++..|..|..+++|++|+|++|++++..| +.
T Consensus 255 l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~ 330 (347)
T 4fmz_A 255 ISDINAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LA 330 (347)
T ss_dssp CCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GG
T ss_pred cCCChhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hh
Confidence 433 34467777777777653 346667777777777777776666667777777777777777766544 66
Q ss_pred CCCCCCeEeCcCCccc
Q 035691 316 SLKSLEGLDLFQNTFQ 331 (640)
Q Consensus 316 ~l~~L~~L~l~~N~l~ 331 (640)
.+++|++|++++|+++
T Consensus 331 ~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 331 SLSKMDSADFANQVIK 346 (347)
T ss_dssp GCTTCSEESSSCC---
T ss_pred hhhccceeehhhhccc
Confidence 6777777777777664
No 38
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.5e-39 Score=323.30 Aligned_cols=190 Identities=28% Similarity=0.432 Sum_probs=151.9
Q ss_pred CCCcccCcccccccceEEEEEEC-----CCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILD-----PDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......++|.+|+++|++++|||||+++|+|.. +
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-----G 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-----C
Confidence 45678899999999999999875 3688999999976666667889999999999999999999999743 3
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASD---DLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND 592 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~ 592 (640)
+..++|||||++|+|.++++..+... .....+..++|.++..|+.||+.||+|||+ ++|+||||||+|||++++
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCC
Confidence 47899999999999999996532100 001112458999999999999999999999 699999999999999999
Q ss_pred CcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 593 MIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 593 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
+.+||+|||+|+....... ........||+.|||||++.+.++|.|
T Consensus 165 ~~~Ki~DFGla~~~~~~~~--~~~~~~~~gt~~ymAPE~~~~~~~~~k 210 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTE 210 (299)
T ss_dssp GCEEECCCSCHHHHTGGGC--EEETTTEEECGGGCCHHHHHHCCCCHH
T ss_pred CcEEECCcccceecCCCCc--eeecCceecChhhcCHHHHcCCCCCch
Confidence 9999999999986543211 122233468999999999999888753
No 39
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3e-38 Score=318.45 Aligned_cols=189 Identities=26% Similarity=0.409 Sum_probs=145.2
Q ss_pred CCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc-------C
Q 035691 442 GFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDF-------Q 513 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-------~ 513 (640)
+|++.+.||+|+||+||+|+++.+|+.||||+++... ....+.+.+|+++|++++|||||++++++...+. .
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 5888999999999999999999999999999996544 3345789999999999999999999999754321 1
Q ss_pred CCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC
Q 035691 514 GNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM 593 (640)
Q Consensus 514 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~ 593 (640)
...+.|+|||||++|+|.+++...... ...++..++.|+.|++.||+|||+ ++|+||||||+|||++.++
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~-------~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~ 155 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTI-------EERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDD 155 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSG-------GGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCC-------ChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCC
Confidence 233579999999999999999754432 235667788999999999999999 6999999999999999999
Q ss_pred cEEEccccccccCCCccCCC--------ceeeccccccccccCcccCCCCCCCCC
Q 035691 594 IAHVGDFGLTRFIPEVISSN--------QCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 594 ~~kl~DfGla~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
.+||+|||+|+.+....... .....+.+||+.|||||++.+..++.|
T Consensus 156 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~ 210 (299)
T 4g31_A 156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHK 210 (299)
T ss_dssp CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTH
T ss_pred cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCH
Confidence 99999999999764322111 112234679999999999999988763
No 40
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.1e-38 Score=314.60 Aligned_cols=177 Identities=26% Similarity=0.394 Sum_probs=146.3
Q ss_pred cccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeEE
Q 035691 444 SSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKALV 521 (640)
Q Consensus 444 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~lv 521 (640)
.+.+.||+|+||+||+|+++.+++.||+|++... .....+.|.+|+++|++++|||||+++++|... ...+...++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEEEEE
Confidence 5567899999999999999999999999999643 234457899999999999999999999997442 1234568999
Q ss_pred eeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC-CCcEEEccc
Q 035691 522 YEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN-DMIAHVGDF 600 (640)
Q Consensus 522 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~-~~~~kl~Df 600 (640)
||||++|+|.+++.... .+++..+..|+.||+.||+|||+. .++|+||||||+|||++. ++.+||+||
T Consensus 108 mEy~~gg~L~~~l~~~~----------~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DF 176 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK----------VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred EeCCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeC
Confidence 99999999999996532 388999999999999999999983 123999999999999984 799999999
Q ss_pred cccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 601 GLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 601 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|+..... ...+.+||+.|||||++.+ +++.
T Consensus 177 Gla~~~~~~------~~~~~~GTp~YmAPE~~~~-~y~~ 208 (290)
T 3fpq_A 177 GLATLKRAS------FAKAVIGTPEFMAPEMYEE-KYDE 208 (290)
T ss_dssp TGGGGCCTT------SBEESCSSCCCCCGGGGGT-CCCT
T ss_pred cCCEeCCCC------ccCCcccCccccCHHHcCC-CCCc
Confidence 999854321 2234689999999999865 5665
No 41
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.3e-38 Score=310.97 Aligned_cols=174 Identities=28% Similarity=0.407 Sum_probs=138.4
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||+||+|+++.+|+.||||++... .....+.+.+|+++|++++|||||++++++ .+++.
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~-----~~~~~ 87 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKDE 87 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EECCE
Confidence 6899999999999999999999999999999999643 233456799999999999999999999994 45568
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.|+||||| +|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||
T Consensus 88 ~~ivmEy~-~g~L~~~l~~~~----------~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl 153 (275)
T 3hyh_A 88 IIMVIEYA-GNELFDYIVQRD----------KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEEEEECC-CEEHHHHHHHSC----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEE
T ss_pred EEEEEeCC-CCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEE
Confidence 99999999 679999886443 38899999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
+|||+|+..... ....+.+||+.|||||++.+..++
T Consensus 154 ~DFGla~~~~~~-----~~~~~~~GT~~Y~APE~~~~~~y~ 189 (275)
T 3hyh_A 154 ADFGLSNIMTDG-----NFLKTSCGSPNYAAPEVISGKLYA 189 (275)
T ss_dssp CCSSCC--------------------CTTSCHHHHSSSSCC
T ss_pred eecCCCeecCCC-----CccCCeeECcccCChhhhcCCCCC
Confidence 999999865432 122346799999999999988764
No 42
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2e-38 Score=322.24 Aligned_cols=178 Identities=25% Similarity=0.270 Sum_probs=147.4
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.+.|+..+.||+|+||+||+|+++.+|+.||||+++.... ..+|+.+++.++|||||++++++ .+++..|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~-----~~~~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAV-----REGPWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEE-----EETTEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEE-----EECCEEE
Confidence 3457788899999999999999999999999999965432 24799999999999999999995 4456899
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC-cEEEc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM-IAHVG 598 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~-~~kl~ 598 (640)
+|||||+||+|.++++..+ .+++..+..++.||+.||+|||+ ++|+||||||+|||++.+| .+||+
T Consensus 127 ivmEy~~gg~L~~~l~~~~----------~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~ 193 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQMG----------CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALC 193 (336)
T ss_dssp EEECCCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEEC
T ss_pred EEEeccCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEe
Confidence 9999999999999996433 28899999999999999999999 6999999999999999988 69999
Q ss_pred cccccccCCCccCC-CceeeccccccccccCcccCCCCCCCCC
Q 035691 599 DFGLTRFIPEVISS-NQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 599 DfGla~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|||+|+.+...... .......++||+.|||||++.+..++.|
T Consensus 194 DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~ 236 (336)
T 4g3f_A 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 236 (336)
T ss_dssp CCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTH
T ss_pred eCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcH
Confidence 99999976532211 1122334679999999999999988753
No 43
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.6e-36 Score=311.65 Aligned_cols=290 Identities=18% Similarity=0.186 Sum_probs=174.9
Q ss_pred CCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCC
Q 035691 4 FLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNI 83 (640)
Q Consensus 4 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L 83 (640)
+|+.+++++|.++ .+|..+. ++|++|++++|.+++..|..|.++++|++|+|++|+|+. +++..+..+++|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~L 104 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISK------IHEKAFSPLRKL 104 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE------ECGGGSTTCTTC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCc------cCHhHhhCcCCC
Confidence 3566666666666 4454442 466666666666665556666666666666666666653 444444556666
Q ss_pred CeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcce
Q 035691 84 RIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEI 163 (640)
Q Consensus 84 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~ 163 (640)
+.|+|++|+++.+ |..+. ++|++|++++|+++.+.+..|.++++|++|++++|.++..+. .+..+..+ +|+.
T Consensus 105 ~~L~L~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~~~l-~L~~ 176 (332)
T 2ft3_A 105 QKLYISKNHLVEI-PPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGF----EPGAFDGL-KLNY 176 (332)
T ss_dssp CEEECCSSCCCSC-CSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGS----CTTSSCSC-CCSC
T ss_pred CEEECCCCcCCcc-Ccccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCC----CcccccCC-ccCE
Confidence 6666666666633 33322 566666666666665555556666666666666666653211 22344444 6666
Q ss_pred EecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcccc
Q 035691 164 VSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFL 243 (640)
Q Consensus 164 L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~ 243 (640)
|++++|+++.+|..+. ++|++|++++|.+++..+..|..+++|+.|+|++|++++..+.+|..+++|+.|
T Consensus 177 L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L-------- 246 (332)
T 2ft3_A 177 LRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLREL-------- 246 (332)
T ss_dssp CBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEE--------
T ss_pred EECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEE--------
Confidence 6666666666665543 566666666666666555666666666666666666666555566666666666
Q ss_pred CCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCC------CCCCeEEecCCccC--CCCCccCC
Q 035691 244 GQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSC------VGLEYLNLSINSFH--GPIHPGLS 315 (640)
Q Consensus 244 ~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~--~~~~~~~~ 315 (640)
+|++|+++ .+|..+..+++|+.|++++|+|++..+..|..+ ..|+.|++++|++. +..|..|.
T Consensus 247 --------~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~ 317 (332)
T 2ft3_A 247 --------HLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFR 317 (332)
T ss_dssp --------ECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGT
T ss_pred --------ECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccc
Confidence 55556665 455566666677777777777765555555442 45666777777665 45566666
Q ss_pred CCCCCCeEeCcCCc
Q 035691 316 SLKSLEGLDLFQNT 329 (640)
Q Consensus 316 ~l~~L~~L~l~~N~ 329 (640)
.+++|+.+++++|+
T Consensus 318 ~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 318 CVTDRLAIQFGNYK 331 (332)
T ss_dssp TBCCSTTEEC----
T ss_pred ccchhhhhhccccc
Confidence 66677777666663
No 44
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.8e-36 Score=308.78 Aligned_cols=291 Identities=19% Similarity=0.215 Sum_probs=225.3
Q ss_pred CCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCC
Q 035691 4 FLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNI 83 (640)
Q Consensus 4 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L 83 (640)
+|+.++++++.++ .+|..+. ++|++|++++|+|++..+..|.++++|++|+|++|+|+. +++..+..+++|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~L 102 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK------ISPGAFAPLVKL 102 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCC------BCTTTTTTCTTC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCe------eCHHHhcCCCCC
Confidence 5778888888887 5565443 578888888888887777788888888888888888775 555555668888
Q ss_pred CeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcce
Q 035691 84 RIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEI 163 (640)
Q Consensus 84 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~ 163 (640)
+.|+|++|+++.. |..+. ++|++|++++|++++..+..|.++++|++|++++|.++..+. .+..+.++++|++
T Consensus 103 ~~L~Ls~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~~~l~~L~~ 175 (330)
T 1xku_A 103 ERLYLSKNQLKEL-PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGI----ENGAFQGMKKLSY 175 (330)
T ss_dssp CEEECCSSCCSBC-CSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGB----CTTGGGGCTTCCE
T ss_pred CEEECCCCcCCcc-Chhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCc----ChhhccCCCCcCE
Confidence 8888888888854 44433 688888888888887777778888888888888888865321 3456777888888
Q ss_pred EecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcccc
Q 035691 164 VSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFL 243 (640)
Q Consensus 164 L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~ 243 (640)
|++++|.++.+|..+. ++|++|++++|.+++..|..|..+++|++|+|++|++++..+..|..+++|+.|
T Consensus 176 L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L-------- 245 (330)
T 1xku_A 176 IRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLREL-------- 245 (330)
T ss_dssp EECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEE--------
T ss_pred EECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEE--------
Confidence 8888888888877654 788888888888888778888888888888888888887777778888888777
Q ss_pred CCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCC------CCCCeEEecCCccCC--CCCccCC
Q 035691 244 GQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSC------VGLEYLNLSINSFHG--PIHPGLS 315 (640)
Q Consensus 244 ~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~~--~~~~~~~ 315 (640)
+|++|+++ .+|..+..+++|++|+|++|+|++..+..|... ..|+.|++++|++.. +.|..|.
T Consensus 246 --------~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~ 316 (330)
T 1xku_A 246 --------HLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 316 (330)
T ss_dssp --------ECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred --------ECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccc
Confidence 77777777 667778888888888888888887776766543 678888888888863 5677888
Q ss_pred CCCCCCeEeCcCCc
Q 035691 316 SLKSLEGLDLFQNT 329 (640)
Q Consensus 316 ~l~~L~~L~l~~N~ 329 (640)
.+.+++.++|++|+
T Consensus 317 ~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 317 CVYVRAAVQLGNYK 330 (330)
T ss_dssp TCCCGGGEEC----
T ss_pred cccceeEEEecccC
Confidence 88888888888874
No 45
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.2e-38 Score=318.23 Aligned_cols=189 Identities=24% Similarity=0.319 Sum_probs=150.4
Q ss_pred CCcccCcccccccceEEEEEEC-----CCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 442 GFSSANLIGTGSFGSVYKGILD-----PDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
++++.+.||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|.. .
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-----~ 101 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-----D 101 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----S
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-----C
Confidence 3456788999999999999874 367899999996443 3345789999999999999999999999743 3
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDL------NYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL 589 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~------~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl 589 (640)
...++|||||++|+|.++|......... ......++|..+..|+.|||.||+|||+ .+||||||||+|||+
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLV 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEE
Confidence 4679999999999999999654321110 1112458999999999999999999999 699999999999999
Q ss_pred CCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 590 DNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 590 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
++++.+||+|||+|+....... .......+||+.|||||++.++.+|.|
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~--~~~~~~~~gt~~ymAPE~l~~~~~s~k 227 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADY--YKLLGNSLLPIRWMAPEAIMYGKFSID 227 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGC--BCSSSSSCBCGGGCCHHHHHHCCCCHH
T ss_pred CCCCCEEECCcccceeccCCCc--eeEecccccCCcccCHHHHhCCCCCcc
Confidence 9999999999999986643211 112234579999999999999888753
No 46
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-36 Score=321.06 Aligned_cols=308 Identities=20% Similarity=0.178 Sum_probs=270.4
Q ss_pred cCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCC
Q 035691 25 RLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNA 104 (640)
Q Consensus 25 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 104 (640)
.+.++++|++++|.++...+..|..+++|++|+|++|.|+. +++..+..+++|+.|+|++|.+++..|..|.++
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 116 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE------IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV 116 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCE------ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccc------cChhhccCCCCcCEEECCCCCCCcCCHHHhcCC
Confidence 46899999999999997666678999999999999999875 777777789999999999999999999999999
Q ss_pred CCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCC
Q 035691 105 SKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKL 184 (640)
Q Consensus 105 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L 184 (640)
++|++|+|++|+++.+.+..|..+++|++|+|++|+++.+ .+..+.++++|++|++++|.++.++ +..+++|
T Consensus 117 ~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~------~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L 188 (390)
T 3o6n_A 117 PLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI------EDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSL 188 (390)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC------CTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTC
T ss_pred CCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCcc------ChhhccCCCCCCEEECCCCcCCccc--ccccccc
Confidence 9999999999999987777789999999999999999987 4466888999999999999999875 4567999
Q ss_pred CEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccC------CCCCceEEccCCcC
Q 035691 185 QVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG------QYPVRWLDLSHNHL 258 (640)
Q Consensus 185 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~------~~~l~~L~Ls~N~l 258 (640)
+.|++++|.+++. ...++|++|++++|.+... |.. ..++|+.|++++|.+.+ ...|++|++++|.+
T Consensus 189 ~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l 260 (390)
T 3o6n_A 189 FHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNEL 260 (390)
T ss_dssp SEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCC
T ss_pred ceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCcccHHHcCCCCccEEECCCCcC
Confidence 9999999999853 3457899999999999855 332 34799999999998754 45699999999999
Q ss_pred CCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcc
Q 035691 259 TGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGD 338 (640)
Q Consensus 259 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 338 (640)
++..|..|..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+++..+
T Consensus 261 ~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---- 334 (390)
T 3o6n_A 261 EKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---- 334 (390)
T ss_dssp CEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC----
T ss_pred CCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC----
Confidence 9988999999999999999999999 46777788999999999999998 46777888999999999999998442
Q ss_pred cCCCCCCCCCccccccCCCCCcCCC
Q 035691 339 VPRKGIFKNASAISVAGNEKLCGGI 363 (640)
Q Consensus 339 ~p~~~~~~~~~~~~~~~n~~~c~~~ 363 (640)
...++.+..+++.+|+|.|.+.
T Consensus 335 ---~~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 335 ---LSTHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp ---CCTTCCCSEEECCSSCEEHHHH
T ss_pred ---chhhccCCEEEcCCCCccchhH
Confidence 3457789999999999998654
No 47
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=314.09 Aligned_cols=174 Identities=30% Similarity=0.459 Sum_probs=140.9
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
..+++.+.+.||+|+||+||+|+++. .||||+++... ....+.|.+|+++|++++|||||+++|+|.. +
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~ 104 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------D 104 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------S
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------C
Confidence 34567888999999999999998752 59999986443 3445789999999999999999999998732 2
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++|||||++|+|.+++..... .+++.++..|+.||+.||+|||+ ++||||||||+|||+++++.+|
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~~~---------~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~K 172 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQET---------KFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVK 172 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSCC---------CCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEE
T ss_pred eEEEEEEcCCCCCHHHHHhhcCC---------CCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEE
Confidence 47899999999999999965432 38999999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
|+|||+|+....... .......+||+.|||||++.+.
T Consensus 173 i~DFGla~~~~~~~~--~~~~~~~~GT~~ymAPE~l~~~ 209 (307)
T 3omv_A 173 IGDFGLATVKSRWSG--SQQVEQPTGSVLWMAPEVIRMQ 209 (307)
T ss_dssp ECCCSSCBC--------------CCCCTTSCCHHHHHCC
T ss_pred EeeccCceecccCCc--ceeecccccCCCccCHHHhhcc
Confidence 999999987643221 1123346799999999998643
No 48
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.8e-35 Score=315.14 Aligned_cols=290 Identities=22% Similarity=0.205 Sum_probs=247.4
Q ss_pred CCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCC
Q 035691 2 LTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLP 81 (640)
Q Consensus 2 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~ 81 (640)
+++|++|+|++|.|++. | .|..+++|++|++++|+|++. | +..+++|++|+|++|+|+. +| +..++
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~------~~---~~~l~ 106 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN------LD---VTPLT 106 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC------CC---CTTCT
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce------ee---cCCCC
Confidence 68899999999999965 5 699999999999999999974 4 8999999999999999986 44 45699
Q ss_pred CCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCc
Q 035691 82 NIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYL 161 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 161 (640)
+|+.|+|++|++++. | ++.+++|++|++++|+++++ + ++.+++|++|++++|+..+. . .+..+++|
T Consensus 107 ~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~------~--~~~~l~~L 172 (457)
T 3bz5_A 107 KLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITK------L--DVTPQTQL 172 (457)
T ss_dssp TCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCC------C--CCTTCTTC
T ss_pred cCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccc------c--ccccCCcC
Confidence 999999999999985 4 89999999999999999974 3 88999999999999954322 1 36778999
Q ss_pred ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcc
Q 035691 162 EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTI 241 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~ 241 (640)
+.|++++|+++.+| +..+++|+.|++++|.+++. .+..+++|++|++++|++++ +| +..+++|+.|++++|.
T Consensus 173 ~~L~ls~n~l~~l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 173 TTLDCSFNKITELD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp CEEECCSSCCCCCC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSC
T ss_pred CEEECCCCccceec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCc
Confidence 99999999999987 78899999999999999975 38899999999999999997 45 8899999999999998
Q ss_pred ccCCC-----CC----------ceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCc--------cccCCCCCCe
Q 035691 242 FLGQY-----PV----------RWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPS--------SLGSCVGLEY 298 (640)
Q Consensus 242 ~~~~~-----~l----------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--------~~~~l~~L~~ 298 (640)
+.+.+ .| +.|++++|.+.+.+| ++.+++|+.|+|++|+..+.+|. .+.++++|++
T Consensus 245 l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~ 322 (457)
T 3bz5_A 245 LTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVY 322 (457)
T ss_dssp CSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCE
T ss_pred CCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCE
Confidence 86543 23 455666666555555 57889999999999987766654 3566789999
Q ss_pred EEecCCccCCCCCccCCCCCCCCeEeCcCCcccc
Q 035691 299 LNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQA 332 (640)
Q Consensus 299 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 332 (640)
|+|++|+|++. + +..+++|+.||+++|+++.
T Consensus 323 L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 323 LYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp EECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred EECCCCccccc-c--cccCCcCcEEECCCCCCCC
Confidence 99999999985 3 8999999999999999984
No 49
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.4e-38 Score=317.79 Aligned_cols=177 Identities=28% Similarity=0.307 Sum_probs=143.7
Q ss_pred CCCcccCcccccccceEEEEEEC---CCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILD---PDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
++|++.+.||+|+||+||+|++. .+++.||||+++... ......+.+|+++|++++|||||++++++ .++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-----QTE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEE-----EET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EEC
Confidence 46899999999999999999873 468899999996432 22335688999999999999999999994 455
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
+..|+|||||+||+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.+|.+
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~----------~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~v 165 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEV----------MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHI 165 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCE
Confidence 68999999999999999996543 28899999999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+|||+|+...... ....+.+||+.|||||++.+..++.
T Consensus 166 Kl~DFGla~~~~~~~----~~~~~~~GT~~YmAPE~~~~~~y~~ 205 (304)
T 3ubd_A 166 KLTDFGLSKESIDHE----KKAYSFCGTVEYMAPEVVNRRGHTQ 205 (304)
T ss_dssp EEESSEEEEC---------CCCCSCCCCGGGCCHHHHHTSCCCT
T ss_pred EecccccceeccCCC----ccccccccCcccCCHHHhccCCCCC
Confidence 999999998653221 1223467999999999999988875
No 50
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.9e-35 Score=318.24 Aligned_cols=314 Identities=25% Similarity=0.351 Sum_probs=241.4
Q ss_pred CCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCC
Q 035691 12 QNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGN 91 (640)
Q Consensus 12 ~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N 91 (640)
.+.+.+.++ ...+.+|+.|++++|.++. +|. +..+++|++|||++|.++. +|+ +..+++|+.|+|++|
T Consensus 33 ~~~~~~~i~--~~~l~~l~~L~l~~~~i~~-l~~-~~~l~~L~~L~Ls~n~l~~------~~~--~~~l~~L~~L~l~~n 100 (466)
T 1o6v_A 33 KTNVTDTVS--QTDLDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTD------ITP--LKNLTKLVDILMNNN 100 (466)
T ss_dssp CSSTTSEEC--HHHHHTCCEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCC------CGG--GTTCTTCCEEECCSS
T ss_pred ccccccccC--hhHhccccEEecCCCCCcc-Ccc-hhhhcCCCEEECCCCccCC------chh--hhccccCCEEECCCC
Confidence 344444444 2456789999999999984 554 8899999999999999986 665 567999999999999
Q ss_pred cccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCC-------------cccccccccCC
Q 035691 92 QFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVN-------------DLRFLDSLVNC 158 (640)
Q Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------~~~~~~~l~~l 158 (640)
++++..+ |.++++|++|+|++|++++..+ +..+++|++|+|++|.++.++.- .+.....+.++
T Consensus 101 ~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l 176 (466)
T 1o6v_A 101 QIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANL 176 (466)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTC
T ss_pred ccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccC
Confidence 9997766 9999999999999999997544 89999999999999999876320 00011235667
Q ss_pred CCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEecc
Q 035691 159 TYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLS 238 (640)
Q Consensus 159 ~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 238 (640)
++|+.|++++|.++.++. +..+++|++|++++|.+.+..| +..+++|++|++++|++++. ..+..+++|+.|+++
T Consensus 177 ~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~ 251 (466)
T 1o6v_A 177 TTLERLDISSNKVSDISV-LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 251 (466)
T ss_dssp TTCCEEECCSSCCCCCGG-GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECC
T ss_pred CCCCEEECcCCcCCCChh-hccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECC
Confidence 788888888888877653 6677888888888888876554 67778888888888888754 357788888888888
Q ss_pred CccccC------CCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCc
Q 035691 239 KTIFLG------QYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHP 312 (640)
Q Consensus 239 ~n~~~~------~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 312 (640)
+|.+.+ +..|+.|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++++..|
T Consensus 252 ~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~- 326 (466)
T 1o6v_A 252 NNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP- 326 (466)
T ss_dssp SSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-
T ss_pred CCccccchhhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-
Confidence 886544 3457888888888886544 7788888888888888886544 7778888888888888887655
Q ss_pred cCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCC
Q 035691 313 GLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEK 358 (640)
Q Consensus 313 ~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~ 358 (640)
+..+++|++|++++|+++.. +....++++..+++.+|..
T Consensus 327 -~~~l~~L~~L~l~~n~l~~~------~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 327 -VSSLTKLQRLFFYNNKVSDV------SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC------GGGTTCTTCCEEECCSSCC
T ss_pred -hccCccCCEeECCCCccCCc------hhhccCCCCCEEeCCCCcc
Confidence 67888888888888888743 3334566778888888764
No 51
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-36 Score=333.96 Aligned_cols=308 Identities=20% Similarity=0.185 Sum_probs=272.3
Q ss_pred cCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCC
Q 035691 25 RLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNA 104 (640)
Q Consensus 25 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 104 (640)
.+.+++.|++++|.+..+.+..|..+++|++|+|++|.|+. +++..+..+++|+.|+|++|.|++..|..|+++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 122 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE------IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV 122 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCE------ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCC------CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCC
Confidence 46789999999999997777778999999999999999875 777777789999999999999999999999999
Q ss_pred CCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCC
Q 035691 105 SKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKL 184 (640)
Q Consensus 105 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L 184 (640)
++|++|+|++|.|+++++..|.++++|++|+|++|.++.+ .+..|.++++|++|++++|.++.++ +..+++|
T Consensus 123 ~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~------~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L 194 (597)
T 3oja_B 123 PLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI------EDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSL 194 (597)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC------CTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTC
T ss_pred CCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCC------ChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhh
Confidence 9999999999999987777889999999999999999987 4567889999999999999999886 4557899
Q ss_pred CEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccC------CCCCceEEccCCcC
Q 035691 185 QVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG------QYPVRWLDLSHNHL 258 (640)
Q Consensus 185 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~------~~~l~~L~Ls~N~l 258 (640)
+.|++++|.+++ +...++|+.|++++|.+....+.. .++|+.|++++|.+.+ +..|+.|+|++|.+
T Consensus 195 ~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l 266 (597)
T 3oja_B 195 FHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNEL 266 (597)
T ss_dssp SEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCC
T ss_pred hhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCChhhccCCCCCEEECCCCcc
Confidence 999999999985 345578999999999998554433 2689999999998764 45699999999999
Q ss_pred CCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcc
Q 035691 259 TGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGD 338 (640)
Q Consensus 259 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 338 (640)
++.+|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|.++..+
T Consensus 267 ~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---- 340 (597)
T 3oja_B 267 EKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---- 340 (597)
T ss_dssp CEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC----
T ss_pred CCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC----
Confidence 99999999999999999999999995 6777888999999999999998 57778899999999999999998432
Q ss_pred cCCCCCCCCCccccccCCCCCcCCC
Q 035691 339 VPRKGIFKNASAISVAGNEKLCGGI 363 (640)
Q Consensus 339 ~p~~~~~~~~~~~~~~~n~~~c~~~ 363 (640)
...++.+..+++++|+|.|.+.
T Consensus 341 ---~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 341 ---LSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp ---CCTTCCCSEEECCSSCEEHHHH
T ss_pred ---hhhcCCCCEEEeeCCCCCChhH
Confidence 3456789999999999999754
No 52
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.1e-36 Score=311.23 Aligned_cols=255 Identities=29% Similarity=0.460 Sum_probs=221.8
Q ss_pred CCCCeeeccCCcccc--cCCccCcCCCCCCEEECcC-CccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccC
Q 035691 81 PNIRIPLLAGNQFFG--NIPHSISNASKLEWLDFAN-NSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVN 157 (640)
Q Consensus 81 ~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 157 (640)
.+++.|+|++|.+++ .+|..|.++++|++|+|++ |.+++.+|..|..+++|++|+|++|++++. .+..|.+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~------~p~~~~~ 123 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA------IPDFLSQ 123 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEE------CCGGGGG
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCc------CCHHHhC
Confidence 567888888888887 7888888888888888884 888888888888888888888888888754 4567788
Q ss_pred CCCcceEecCCCCCCC-cCcCCCCCCCCCEEEccCCcCcccCCcCccCCC-CCCEEEccCCCCCCCCCccccCCCCccEE
Q 035691 158 CTYLEIVSLNVNSLRS-IPISVGYLPKLQVLSLFENNISGEIPSSLGNFT-FLTELNLRGNSIRGSIPSALGNCHQLQSL 235 (640)
Q Consensus 158 l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 235 (640)
+++|++|++++|.++. +|..+..+++|++|+|++|.+++.+|..+..++ +|++|+|++|++++.+|..|..++ |+.|
T Consensus 124 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 124 IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEE
T ss_pred CCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEE
Confidence 8888888888888884 788888889999999999999888899999988 899999999999988888888876 7777
Q ss_pred eccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCC
Q 035691 236 DLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLS 315 (640)
Q Consensus 236 ~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 315 (640)
++++|++++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..|.
T Consensus 203 ----------------~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~ 265 (313)
T 1ogq_A 203 ----------------DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLT 265 (313)
T ss_dssp ----------------ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGG
T ss_pred ----------------ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHh
Confidence 7888888888899999999999999999999866665 88889999999999999989999999
Q ss_pred CCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCCCcCCCc
Q 035691 316 SLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLCGGIS 364 (640)
Q Consensus 316 ~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c~~~~ 364 (640)
.+++|++|+|++|+++ +.+|..+.++.+..+++.+|+++||.|.
T Consensus 266 ~l~~L~~L~Ls~N~l~-----~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 266 QLKFLHSLNVSFNNLC-----GEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp GCTTCCEEECCSSEEE-----EECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred cCcCCCEEECcCCccc-----ccCCCCccccccChHHhcCCCCccCCCC
Confidence 9999999999999998 7788777888999999999999999764
No 53
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.6e-37 Score=310.21 Aligned_cols=179 Identities=27% Similarity=0.315 Sum_probs=139.6
Q ss_pred CCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeEE
Q 035691 442 GFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKALV 521 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~lv 521 (640)
+|.+.+.||+|+||+||+|++ +|+.||||+++..... ...++.|+..+.+++|||||+++++|.... ......++|
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEEE
Confidence 466778999999999999998 5899999999644322 123445666667889999999999986542 222367999
Q ss_pred eeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 522 YEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHH-----CKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 522 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~-----~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
||||++|+|.++++.. .++|..+.+++.|++.||+|||+. +.++|+||||||+|||++.++.+|
T Consensus 80 ~Ey~~~gsL~~~l~~~-----------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~K 148 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY-----------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EECCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred ecCCCCCcHHHHHHhC-----------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEE
Confidence 9999999999999643 278899999999999999999974 235899999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
|+|||+|+................+||+.|||||++.+.
T Consensus 149 i~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~ 187 (303)
T 3hmm_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp ECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred EEeCCCCccccCCCCceeeecccccccccccCHHHhccc
Confidence 999999987643222111223345799999999999765
No 54
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.9e-37 Score=314.81 Aligned_cols=201 Identities=22% Similarity=0.302 Sum_probs=158.9
Q ss_pred cCHHHHHHhcCCCcccCcccccccceEEEEEECCC-----CeEEEEEEeeccc-chhHHHHHHHHHHHHhcCC-CCCcce
Q 035691 431 VSYESLLKATGGFSSANLIGTGSFGSVYKGILDPD-----QTVVAVKVLFLHQ-RGALKSFMAECEALRNIRH-RNLVKI 503 (640)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H-~niv~l 503 (640)
++..+++...++|++.+.||+|+||+||+|++... ++.||||++.... ....++|.+|+++|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 34455666678899999999999999999997543 3689999996443 3345789999999999965 899999
Q ss_pred eEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCC------CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 035691 504 ITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASD------DLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQI 577 (640)
Q Consensus 504 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~------~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~i 577 (640)
+|+|.. .+...++|||||++|+|.++|+...... ........+++..+..|+.|||.||+|||+ ++|
T Consensus 134 ~g~~~~----~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~i 206 (353)
T 4ase_A 134 LGACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKC 206 (353)
T ss_dssp EEEECC----TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTC
T ss_pred EEEEEe----cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCe
Confidence 999843 2346799999999999999996432210 000112448999999999999999999999 699
Q ss_pred eeCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 578 VHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 578 vHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|||||||+|||+++++.+||+|||+|+.+..... .......+||+.|||||++.+..||.|
T Consensus 207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~--~~~~~~~~gt~~ymAPE~l~~~~y~~k 267 (353)
T 4ase_A 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD--YVRKGDARLPLKWMAPETIFDRVYTIQ 267 (353)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT--SEEETTEEECGGGCCHHHHHHCCCCHH
T ss_pred ecCccCccceeeCCCCCEEECcchhhhhcccCCC--ceeeccccccccccCHHHHhcCCCCCc
Confidence 9999999999999999999999999997643221 223344579999999999999888753
No 55
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-36 Score=312.86 Aligned_cols=184 Identities=23% Similarity=0.326 Sum_probs=152.2
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCC-cCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSD-FQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~~ 516 (640)
.++|++.+.||+|+||+||+|+++.+|+.||||+++... ....+.+.+|+++|+.++|||||++++++.... +....
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999999999999999996432 334567899999999999999999999975432 44556
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..|+|||||+ |+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~----------~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~K 198 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ----------PLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELK 198 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS----------CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEE
T ss_pred EEEEEEeCCC-CCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEE
Confidence 7899999996 68999986543 38899999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
|+|||+|+.+............+.+||++|||||++.+..+
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~ 239 (398)
T 4b99_A 199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 239 (398)
T ss_dssp ECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSC
T ss_pred EeecceeeecccCccccccccccceeChHhcCHHHhcCCCC
Confidence 99999999764332222233445789999999999988654
No 56
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.4e-34 Score=298.91 Aligned_cols=300 Identities=21% Similarity=0.273 Sum_probs=260.7
Q ss_pred hhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccC
Q 035691 22 EIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSI 101 (640)
Q Consensus 22 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 101 (640)
.+..+++|++|++++|.+.. +|. +..+++|++|++++|++++ +|+ +..+++|+.|+|++|.++.. ..|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~~-~~~~~~L~~L~l~~n~i~~------~~~--~~~l~~L~~L~L~~n~i~~~--~~~ 106 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQG-IEYLTNLEYLNLNGNQITD------ISP--LSNLVKLTNLYIGTNKITDI--SAL 106 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCC------CGG--GTTCTTCCEEECCSSCCCCC--GGG
T ss_pred cchhcccccEEEEeCCcccc-chh-hhhcCCccEEEccCCcccc------chh--hhcCCcCCEEEccCCcccCc--hHH
Confidence 46788999999999999984 443 8899999999999999986 665 56799999999999999964 469
Q ss_pred cCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCC
Q 035691 102 SNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYL 181 (640)
Q Consensus 102 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l 181 (640)
.++++|++|+|++|++++..+ +..+++|++|++++|..... ...+..+++|++|++++|.+..++. +..+
T Consensus 107 ~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-------~~~~~~l~~L~~L~l~~~~~~~~~~-~~~l 176 (347)
T 4fmz_A 107 QNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-------LSPLSNMTGLNYLTVTESKVKDVTP-IANL 176 (347)
T ss_dssp TTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-------CGGGTTCTTCCEEECCSSCCCCCGG-GGGC
T ss_pred cCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccc-------ccchhhCCCCcEEEecCCCcCCchh-hccC
Confidence 999999999999999997544 89999999999999965442 2348899999999999999999776 7789
Q ss_pred CCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccC------CCCCceEEccC
Q 035691 182 PKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLG------QYPVRWLDLSH 255 (640)
Q Consensus 182 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~------~~~l~~L~Ls~ 255 (640)
++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+ ...|++|++++
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~ 252 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGT 252 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCS
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCC
Confidence 999999999999996544 8899999999999999996655 8999999999999997654 45689999999
Q ss_pred CcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccC
Q 035691 256 NHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQ 335 (640)
Q Consensus 256 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 335 (640)
|.+++. ..+..+++|+.|++++|++++. ..+..+++|++|++++|++++..|..+..+++|++|++++|+++..
T Consensus 253 n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-- 326 (347)
T 4fmz_A 253 NQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI-- 326 (347)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC--
T ss_pred CccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc--
Confidence 999964 5789999999999999999964 4689999999999999999998899999999999999999999843
Q ss_pred CcccCCCCCCCCCccccccCCC
Q 035691 336 NGDVPRKGIFKNASAISVAGNE 357 (640)
Q Consensus 336 ~~~~p~~~~~~~~~~~~~~~n~ 357 (640)
.| ...++.+..+++.+|+
T Consensus 327 ---~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 327 ---RP-LASLSKMDSADFANQV 344 (347)
T ss_dssp ---GG-GGGCTTCSEESSSCC-
T ss_pred ---cC-hhhhhccceeehhhhc
Confidence 23 4557788899999886
No 57
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.9e-34 Score=294.33 Aligned_cols=268 Identities=20% Similarity=0.210 Sum_probs=237.5
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
+.|+.|+|++|+|++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+|+. +|..++ ++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~------l~~~~~---~~ 122 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE------LPEKMP---KT 122 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB------CCSSCC---TT
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc------cChhhc---cc
Confidence 468999999999998888899999999999999999998889999999999999999999985 777664 79
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCc--cCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCC
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTA--SIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTY 160 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~ 160 (640)
|+.|++++|++++..+..|.++++|++|++++|.++. ..+..|.++++|++|++++|.++.++. .+. ++
T Consensus 123 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~-------~~~--~~ 193 (330)
T 1xku_A 123 LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQ-------GLP--PS 193 (330)
T ss_dssp CCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCS-------SCC--TT
T ss_pred ccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCc-------ccc--cc
Confidence 9999999999999988999999999999999999974 678899999999999999999998643 222 78
Q ss_pred cceEecCCCCCCCc-CcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccC
Q 035691 161 LEIVSLNVNSLRSI-PISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSK 239 (640)
Q Consensus 161 L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 239 (640)
|+.|++++|.++.+ |..+..+++|++|+|++|.+++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|
T Consensus 194 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L---- 268 (330)
T 1xku_A 194 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVV---- 268 (330)
T ss_dssp CSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEE----
T ss_pred CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEE----
Confidence 99999999999996 567889999999999999999888889999999999999999999 778889999999988
Q ss_pred ccccCCCCCceEEccCCcCCCCCCccCCCC------CCCCEEECCCCcccC--cCCccccCCCCCCeEEecCCc
Q 035691 240 TIFLGQYPVRWLDLSHNHLTGPIPLAVGNL------KSIPHLDLSKNKLSG--EIPSSLGSCVGLEYLNLSINS 305 (640)
Q Consensus 240 n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~ 305 (640)
++++|+|++..+..|... ..|+.|++++|.+.. ..|..|..+.+|+.++|++|+
T Consensus 269 ------------~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 269 ------------YLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp ------------ECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ------------ECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 777788887777777543 789999999999974 567889999999999999995
No 58
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.2e-34 Score=305.73 Aligned_cols=286 Identities=21% Similarity=0.216 Sum_probs=241.7
Q ss_pred CCCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCC
Q 035691 1 NLTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTL 80 (640)
Q Consensus 1 nl~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l 80 (640)
++++|++|+|++|+|++. | ++.+++|++|++++|+|++. + +.++++|++|+|++|+|+. +| +..+
T Consensus 62 ~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~------l~---~~~l 126 (457)
T 3bz5_A 62 KLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK------LD---VSQN 126 (457)
T ss_dssp GCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC------CC---CTTC
T ss_pred ccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe------ec---CCCC
Confidence 368999999999999975 4 99999999999999999975 4 8999999999999999976 54 4569
Q ss_pred CCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCC
Q 035691 81 PNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTY 160 (640)
Q Consensus 81 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~ 160 (640)
++|+.|++++|++++. .++++++|++|++++|+..+.+ .+..+++|++|++++|++++++ +..+++
T Consensus 127 ~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~---------l~~l~~ 192 (457)
T 3bz5_A 127 PLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD---------VSQNKL 192 (457)
T ss_dssp TTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC---------CTTCTT
T ss_pred CcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec---------cccCCC
Confidence 9999999999999985 3889999999999999655445 4889999999999999998862 667899
Q ss_pred cceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCC-------Ccc
Q 035691 161 LEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCH-------QLQ 233 (640)
Q Consensus 161 L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-------~L~ 233 (640)
|+.|++++|+++.++ +..+++|++|++++|++++ +| +..+++|+.|++++|++++..+..+.++. +|+
T Consensus 193 L~~L~l~~N~l~~~~--l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~ 267 (457)
T 3bz5_A 193 LNRLNCDTNNITKLD--LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLL 267 (457)
T ss_dssp CCEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCS
T ss_pred CCEEECcCCcCCeec--cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCC
Confidence 999999999999984 7889999999999999997 55 88999999999999999987766665554 556
Q ss_pred EEeccCcccc------CCCCCceEEccCCcCCCCCCc--------cCCCCCCCCEEECCCCcccCcCCccccCCCCCCeE
Q 035691 234 SLDLSKTIFL------GQYPVRWLDLSHNHLTGPIPL--------AVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYL 299 (640)
Q Consensus 234 ~L~ls~n~~~------~~~~l~~L~Ls~N~l~~~~~~--------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 299 (640)
.|++++|.+. .+..|+.|++++|...+.+|. .+.++++|+.|++++|+|++. + +..+++|+.|
T Consensus 268 ~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L 344 (457)
T 3bz5_A 268 EIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSL 344 (457)
T ss_dssp CCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEE
T ss_pred EEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEE
Confidence 6677777543 346689999999987665553 367778999999999999974 3 8999999999
Q ss_pred EecCCccCCCCCccCCCCCCCCeEeCcCCccc
Q 035691 300 NLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQ 331 (640)
Q Consensus 300 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 331 (640)
++++|+|++ ++.|..|++++|.+.
T Consensus 345 ~l~~N~l~~--------l~~L~~L~l~~n~l~ 368 (457)
T 3bz5_A 345 SCVNAHIQD--------FSSVGKIPALNNNFE 368 (457)
T ss_dssp ECCSSCCCB--------CTTGGGSSGGGTSEE
T ss_pred ECCCCCCCC--------ccccccccccCCcEE
Confidence 999999986 245666677777776
No 59
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.4e-34 Score=295.73 Aligned_cols=267 Identities=19% Similarity=0.201 Sum_probs=237.4
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
++|+.|+|++|+|++..|..|.++++|++|++++|++++..|.+|..+++|++|+|++|+|+. +|..++ ++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------l~~~~~---~~ 124 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE------IPPNLP---SS 124 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCS------CCSSCC---TT
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCc------cCcccc---cc
Confidence 479999999999998888899999999999999999998889999999999999999999985 887765 79
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCc--cCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCC
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTA--SIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTY 160 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~ 160 (640)
|+.|++++|++++..+..|.++++|++|++++|.++. ..+..|..+ +|++|++++|+++.++. .+. ++
T Consensus 125 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~-------~~~--~~ 194 (332)
T 2ft3_A 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPK-------DLP--ET 194 (332)
T ss_dssp CCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCS-------SSC--SS
T ss_pred CCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCc-------ccc--CC
Confidence 9999999999999888899999999999999999963 778889988 99999999999998743 222 68
Q ss_pred cceEecCCCCCCCcC-cCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccC
Q 035691 161 LEIVSLNVNSLRSIP-ISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSK 239 (640)
Q Consensus 161 L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 239 (640)
|++|++++|.++.++ ..+..+++|++|+|++|.+++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|
T Consensus 195 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L---- 269 (332)
T 2ft3_A 195 LNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVV---- 269 (332)
T ss_dssp CSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEE----
T ss_pred CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEE----
Confidence 999999999999966 57888999999999999999988889999999999999999999 778889999999998
Q ss_pred ccccCCCCCceEEccCCcCCCCCCccCCCC------CCCCEEECCCCccc--CcCCccccCCCCCCeEEecCCc
Q 035691 240 TIFLGQYPVRWLDLSHNHLTGPIPLAVGNL------KSIPHLDLSKNKLS--GEIPSSLGSCVGLEYLNLSINS 305 (640)
Q Consensus 240 n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~ 305 (640)
++++|+|++..+..|... .+|+.|++++|.+. ...|..|..+++|+.|++++|+
T Consensus 270 ------------~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 270 ------------YLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp ------------ECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ------------ECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 777788887777777653 67999999999998 6778899999999999999985
No 60
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=8.3e-34 Score=304.48 Aligned_cols=313 Identities=24% Similarity=0.263 Sum_probs=180.1
Q ss_pred CCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCC-------------CEEEccCCCcCC---
Q 035691 2 LTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSEL-------------RTLDLVLNKLEE--- 65 (640)
Q Consensus 2 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L-------------~~L~Ls~N~l~~--- 65 (640)
.++|++|++++|++ +.+|++|+++++|++|++++|.+++.+|..++.+.+| ++|++++|.++.
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 46788999999999 6889889999999999999999988888888877653 777777776654
Q ss_pred ------------ccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCE
Q 035691 66 ------------NQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTR 133 (640)
Q Consensus 66 ------------~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 133 (640)
|.+.+ +|.. +++|+.|++++|++++.. .. .++|++|++++|++++ +| .|+++++|++
T Consensus 89 ~~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~l~-~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~ 157 (454)
T 1jl5_A 89 LPPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKALS-DL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKI 157 (454)
T ss_dssp CCTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSCCC-SC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCE
T ss_pred CcCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCccc-CC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCE
Confidence 11111 3321 244555555555554321 11 1567777777777775 45 4777777777
Q ss_pred EEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEc
Q 035691 134 LNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNL 213 (640)
Q Consensus 134 L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 213 (640)
|++++|++++++. . ..+|++|++++|+++.+| .+..+++|++|++++|.+++ +|... ++|++|++
T Consensus 158 L~l~~N~l~~lp~-------~---~~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l 222 (454)
T 1jl5_A 158 IDVDNNSLKKLPD-------L---PPSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVA 222 (454)
T ss_dssp EECCSSCCSCCCC-------C---CTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEEC
T ss_pred EECCCCcCcccCC-------C---cccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEEC
Confidence 7777777776532 1 136777777777777766 46667777777777777764 33322 46777777
Q ss_pred cCCCCCCCCCccccCCCCccEEeccCccccCC----CCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccC--cCC
Q 035691 214 RGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQ----YPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSG--EIP 287 (640)
Q Consensus 214 ~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~----~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p 287 (640)
++|+++ .+| .|+.+++|+.|++++|.+.+. ..|+.|++++|++++ +|.. +++|+.|++++|++++ ..|
T Consensus 223 ~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~ 296 (454)
T 1jl5_A 223 GNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELP 296 (454)
T ss_dssp CSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCSCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCC
T ss_pred cCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccccccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcC
Confidence 777776 445 377777777777777776653 246777777777775 3332 2566666666666664 122
Q ss_pred ccc-------------cCC-CCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccc
Q 035691 288 SSL-------------GSC-VGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISV 353 (640)
Q Consensus 288 ~~~-------------~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~ 353 (640)
..+ ..+ ++|++|++++|++++ +|.. +++|++|++++|.++. +|. .+++++.+++
T Consensus 297 ~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~------lp~--~l~~L~~L~L 364 (454)
T 1jl5_A 297 PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE------VPE--LPQNLKQLHV 364 (454)
T ss_dssp TTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC------CCC--CCTTCCEEEC
T ss_pred CcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc------ccc--hhhhccEEEC
Confidence 111 112 367777777777765 3433 4677777777777763 333 3566777777
Q ss_pred cCCCCC
Q 035691 354 AGNEKL 359 (640)
Q Consensus 354 ~~n~~~ 359 (640)
++|+..
T Consensus 365 ~~N~l~ 370 (454)
T 1jl5_A 365 EYNPLR 370 (454)
T ss_dssp CSSCCS
T ss_pred CCCCCC
Confidence 777653
No 61
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.1e-35 Score=300.57 Aligned_cols=251 Identities=25% Similarity=0.438 Sum_probs=209.9
Q ss_pred CCCCEEEccCCCcCCccccc--cCCchhhcCCCCCCeeeccC-CcccccCCccCcCCCCCCEEECcCCccCccCCccccC
Q 035691 51 SELRTLDLVLNKLEENQLVG--ELPPYIGFTLPNIRIPLLAG-NQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGR 127 (640)
Q Consensus 51 ~~L~~L~Ls~N~l~~~~~~~--~lp~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 127 (640)
.++++|+|++|.++ | .+|+.+. .+++|+.|+|++ |.+.+.+|..|+++++|++|+|++|++++..|..|..
T Consensus 50 ~~l~~L~L~~~~l~-----~~~~~~~~l~-~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 123 (313)
T 1ogq_A 50 YRVNNLDLSGLNLP-----KPYPIPSSLA-NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123 (313)
T ss_dssp CCEEEEEEECCCCS-----SCEECCGGGG-GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGG
T ss_pred ceEEEEECCCCCcc-----CCcccChhHh-CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhC
Confidence 46777777766654 3 3565444 477777777774 7777778888888888888888888888778888888
Q ss_pred CCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCC-CcCcCCCCCC-CCCEEEccCCcCcccCCcCccCC
Q 035691 128 LRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLR-SIPISVGYLP-KLQVLSLFENNISGEIPSSLGNF 205 (640)
Q Consensus 128 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~-~ip~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l 205 (640)
+++|++|+|++|++++. .+..+.++++|++|++++|+++ .+|..+..++ +|++|++++|.+++.+|..|..+
T Consensus 124 l~~L~~L~Ls~N~l~~~------~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l 197 (313)
T 1ogq_A 124 IKTLVTLDFSYNALSGT------LPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL 197 (313)
T ss_dssp CTTCCEEECCSSEEESC------CCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC
T ss_pred CCCCCEEeCCCCccCCc------CChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC
Confidence 88888888888888754 4566777888888888888888 4888888887 89999999999999999999988
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCc
Q 035691 206 TFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGE 285 (640)
Q Consensus 206 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 285 (640)
+ |++|+|++|++++..|..|..+++|+.| +|++|++++.+|. +..+++|++|+|++|+|++.
T Consensus 198 ~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L----------------~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~ 259 (313)
T 1ogq_A 198 N-LAFVDLSRNMLEGDASVLFGSDKNTQKI----------------HLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGT 259 (313)
T ss_dssp C-CSEEECCSSEEEECCGGGCCTTSCCSEE----------------ECCSSEECCBGGG-CCCCTTCCEEECCSSCCEEC
T ss_pred c-ccEEECcCCcccCcCCHHHhcCCCCCEE----------------ECCCCceeeecCc-ccccCCCCEEECcCCcccCc
Confidence 7 9999999999998899999999999888 7777777765555 88899999999999999999
Q ss_pred CCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCcccc
Q 035691 286 IPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQA 332 (640)
Q Consensus 286 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 332 (640)
+|..|..+++|++|+|++|++++.+|.. ..+++|+.|++++|+.-|
T Consensus 260 ~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc 305 (313)
T 1ogq_A 260 LPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEE
T ss_pred CChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCcc
Confidence 9999999999999999999999888876 889999999999999654
No 62
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.4e-32 Score=294.86 Aligned_cols=300 Identities=25% Similarity=0.306 Sum_probs=203.2
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
++|+.|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|+++. +|. +..+++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~------lp~--~~~l~~ 154 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK------LPE--LQNSSF 154 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS------CCC--CTTCTT
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC------Ccc--cCCCCC
Confidence 468889999998886 5643 3788888888888885 3321 2688899998888875 673 556888
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcc
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLE 162 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 162 (640)
|+.|++++|++++ +|..+ ++|++|++++|++++ +| .|+++++|++|++++|++++++. . .++|+
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~----~------~~~L~ 218 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD----L------PLSLE 218 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC----C------CTTCC
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC----C------cCccc
Confidence 8899999888886 45443 588888998888886 45 58888888888888888887532 1 14788
Q ss_pred eEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccc
Q 035691 163 IVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIF 242 (640)
Q Consensus 163 ~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~ 242 (640)
+|++++|.++.+|. +..+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|+.|++++|.+
T Consensus 219 ~L~l~~n~l~~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l 289 (454)
T 1jl5_A 219 SIVAGNNILEELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIF 289 (454)
T ss_dssp EEECCSSCCSSCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred EEECcCCcCCcccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCcc
Confidence 88888888888874 7778888888888888885 4432 3678888888888875 4433 36788888888877
Q ss_pred cCC----CCCceEEccCCcCCCCCCccCCCC-CCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCC
Q 035691 243 LGQ----YPVRWLDLSHNHLTGPIPLAVGNL-KSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSL 317 (640)
Q Consensus 243 ~~~----~~l~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 317 (640)
.+. ..|++|++++|++++. + .+ ++|+.|++++|++++ +|.. +++|++|++++|++++ +|. .+
T Consensus 290 ~~l~~~~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l 356 (454)
T 1jl5_A 290 SGLSELPPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LP 356 (454)
T ss_dssp SEESCCCTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CC
T ss_pred CcccCcCCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hh
Confidence 663 2477788888877742 2 22 477778888887774 5543 4677777777777774 444 36
Q ss_pred CCCCeEeCcCCccccccCCcccCCC-CCC-------------CCCccccccCCCCC
Q 035691 318 KSLEGLDLFQNTFQAKSQNGDVPRK-GIF-------------KNASAISVAGNEKL 359 (640)
Q Consensus 318 ~~L~~L~l~~N~l~~~~~~~~~p~~-~~~-------------~~~~~~~~~~n~~~ 359 (640)
++|++|++++|+++..+ .+|.. +.+ ++++.+++++|+..
T Consensus 357 ~~L~~L~L~~N~l~~l~---~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~ 409 (454)
T 1jl5_A 357 QNLKQLHVEYNPLREFP---DIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR 409 (454)
T ss_dssp TTCCEEECCSSCCSSCC---CCCTTCCEEECCC-----------------------
T ss_pred hhccEEECCCCCCCcCC---CChHHHHhhhhcccccccccccCcCCEEECCCCcCC
Confidence 77777777777777422 23322 112 55677777777654
No 63
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.4e-34 Score=315.54 Aligned_cols=175 Identities=26% Similarity=0.328 Sum_probs=146.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHH---HHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAE---CEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
++|++.++||+|+||+||+|+++.+|+.||||+++... ........+| +.+++.++|||||+++++ +++
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~-----f~~ 263 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA-----FHT 263 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE-----EEC
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE-----EEE
Confidence 56889999999999999999999999999999996432 2222333444 566677899999999999 556
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
.+..|+|||||+||+|.+++.... .+++..+..++.||+.||+|||+ .+||||||||+|||++.+|.
T Consensus 264 ~~~lylVmEy~~GGdL~~~l~~~~----------~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~ 330 (689)
T 3v5w_A 264 PDKLSFILDLMNGGDLHYHLSQHG----------VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGH 330 (689)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSC
T ss_pred CCEEEEEEecCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCC
Confidence 678999999999999999996543 38899999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCC-CCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS-QVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ 639 (640)
+||+|||+|+.+... ...+.+||+.|||||++.++ .|+.
T Consensus 331 vKL~DFGlA~~~~~~------~~~t~~GTp~YmAPEvl~~~~~y~~ 370 (689)
T 3v5w_A 331 VRISDLGLACDFSKK------KPHASVGTHGYMAPEVLQKGVAYDS 370 (689)
T ss_dssp EEECCCTTCEECSSC------CCCSCCSCGGGCCHHHHSTTCCCCT
T ss_pred EEecccceeeecCCC------CCCCccCCcCccCHHHHhCCCCCCc
Confidence 999999999876432 22346899999999999754 5553
No 64
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=100.00 E-value=1e-33 Score=288.63 Aligned_cols=260 Identities=20% Similarity=0.209 Sum_probs=190.5
Q ss_pred CCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCcc--CCccccCCCCCCEEEcccCcCCCCCCCcccccccccCC
Q 035691 81 PNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTAS--IPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNC 158 (640)
Q Consensus 81 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l 158 (640)
++|+.|+|++|+++.+.+..|.++++|++|+|++|+++.. .+..+..+++|++|+|++|.++.+ +..+.++
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l-------~~~~~~l 100 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-------SSNFLGL 100 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEEE-------EEEEETC
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccccC-------hhhcCCC
Confidence 3455555555555544444455666666666666666532 244555566666666666666542 2345566
Q ss_pred CCcceEecCCCCCCCcCc--CCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCC-CCCccccCCCCccEE
Q 035691 159 TYLEIVSLNVNSLRSIPI--SVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRG-SIPSALGNCHQLQSL 235 (640)
Q Consensus 159 ~~L~~L~L~~N~l~~ip~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L 235 (640)
++|++|++++|.++.++. .+..+++|++|++++|.+.+..+..|.++++|++|+|++|.+.+ ..|..|..+++|+.|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 666666666666666543 56778888888888888888888888888999999999998876 577888888888888
Q ss_pred eccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCC
Q 035691 236 DLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLS 315 (640)
Q Consensus 236 ~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 315 (640)
++++|++++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..+.
T Consensus 181 ----------------~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 181 ----------------DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp ----------------ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ----------------ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 7778888877788999999999999999999977777899999999999999999999999999
Q ss_pred CCC-CCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCCCcCCCcC
Q 035691 316 SLK-SLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLCGGISE 365 (640)
Q Consensus 316 ~l~-~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~ 365 (640)
.++ +|++|+|++|+++|.+...+++.+ +.....+.+..+...|..|..
T Consensus 245 ~~~~~L~~L~L~~N~~~~~c~~~~~~~~--l~~~~~~~~~~~~~~C~~p~~ 293 (306)
T 2z66_A 245 HFPSSLAFLNLTQNDFACTCEHQSFLQW--IKDQRQLLVEVERMECATPSD 293 (306)
T ss_dssp CCCTTCCEEECTTCCEECSGGGHHHHHH--HHHTGGGBSCGGGCBEEESGG
T ss_pred hhhccCCEEEccCCCeecccChHHHHHH--HHhhhhhhccccccccCCchh
Confidence 985 999999999999987754433332 233344455566777776654
No 65
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.6e-34 Score=295.19 Aligned_cols=179 Identities=26% Similarity=0.329 Sum_probs=145.2
Q ss_pred HHhcCCCcccCcccccccceEEEEEEC---CCCeEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCc
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILD---PDQTVVAVKVLFLHQRGALKSFMAECEALRNI-RHRNLVKIITACSSSDF 512 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 512 (640)
....+.|++.+.||+|+||+||+|+++ .+++.||||++.... ....+.+|+++|+.+ +|||||++++++
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~----- 89 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCF----- 89 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEE-----
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEE-----
Confidence 345678999999999999999999874 467899999985433 335688999999998 699999999984
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND 592 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~ 592 (640)
.+.++.|+|||||++|+|.+++. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.+
T Consensus 90 ~~~~~~~lvmE~~~g~~L~~~~~-------------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~ 153 (361)
T 4f9c_A 90 RKNDHVVIAMPYLEHESFLDILN-------------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRR 153 (361)
T ss_dssp EETTEEEEEEECCCCCCHHHHHT-------------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETT
T ss_pred EECCEEEEEEeCCCcccHHHHHc-------------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCC
Confidence 45668999999999999999983 27788999999999999999999 699999999999999876
Q ss_pred -CcEEEccccccccCCCccCC------------------------CceeeccccccccccCcccCCCCC-CC
Q 035691 593 -MIAHVGDFGLTRFIPEVISS------------------------NQCSSVGLKGTVGYAAPEYGMGSQ-VS 638 (640)
Q Consensus 593 -~~~kl~DfGla~~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~-~s 638 (640)
+.+||+|||+|+........ ......+.+||++|||||++.+.+ ++
T Consensus 154 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~ 225 (361)
T 4f9c_A 154 LKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQT 225 (361)
T ss_dssp TTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCC
T ss_pred CCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCC
Confidence 89999999999865321100 001123457999999999998865 44
No 66
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.3e-34 Score=311.65 Aligned_cols=177 Identities=26% Similarity=0.360 Sum_probs=154.5
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeE
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKAL 520 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~l 520 (640)
++|++.+.||+|+||.||+|+++.+|+.||+|++........+.+.+|+++|+.++|||||++++++ .+....++
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-----~~~~~~~i 231 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMVM 231 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE-----ECSSEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEEE
Confidence 5789999999999999999999999999999999776666667899999999999999999999994 55668999
Q ss_pred EeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC--CcEEEc
Q 035691 521 VYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND--MIAHVG 598 (640)
Q Consensus 521 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~--~~~kl~ 598 (640)
|||||+||+|.+++..... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+
T Consensus 232 v~E~~~gg~L~~~i~~~~~---------~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~ 299 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEHN---------KMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLI 299 (573)
T ss_dssp EEECCCCCBHHHHHTCTTS---------CEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEEC
T ss_pred EEeecCCCcHHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEe
Confidence 9999999999999864432 38899999999999999999999 699999999999999854 899999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|||+|+.+... ......+||+.|||||++.+..++.
T Consensus 300 DFG~a~~~~~~-----~~~~~~~GT~~y~APEv~~~~~y~~ 335 (573)
T 3uto_A 300 DFGLTAHLDPK-----QSVKVTTGTAEFAAPEVAEGKPVGY 335 (573)
T ss_dssp CCSSCEECCTT-----SEEEEECSSGGGCCHHHHTTCCBCH
T ss_pred eccceeEccCC-----CceeeeEECccccCHHHhCCCCCCc
Confidence 99999976432 1223457999999999999988763
No 67
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=100.00 E-value=4.8e-32 Score=290.74 Aligned_cols=255 Identities=25% Similarity=0.263 Sum_probs=226.7
Q ss_pred CCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCC
Q 035691 52 ELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNL 131 (640)
Q Consensus 52 ~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 131 (640)
....++.+++.|+. +|..++ ++++.|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|.++++|
T Consensus 44 ~~~~v~c~~~~l~~------iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L 114 (440)
T 3zyj_A 44 QFSKVICVRKNLRE------VPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL 114 (440)
T ss_dssp TSCEEECCSCCCSS------CCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSC
T ss_pred CCCEEEeCCCCcCc------CCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccC
Confidence 46788998888876 887664 688999999999999999999999999999999999999888999999999
Q ss_pred CEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCc-CCCCCCCCCEEEccC-CcCcccCCcCccCCCCCC
Q 035691 132 TRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPI-SVGYLPKLQVLSLFE-NNISGEIPSSLGNFTFLT 209 (640)
Q Consensus 132 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~ 209 (640)
++|+|++|+|+.++ +..|.++++|++|+|++|.++.+|. .+..+++|++|+|++ |.+..+.+..|.++++|+
T Consensus 115 ~~L~L~~n~l~~~~------~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~ 188 (440)
T 3zyj_A 115 NTLELFDNRLTTIP------NGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLR 188 (440)
T ss_dssp CEEECCSSCCSSCC------TTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCC
T ss_pred CEEECCCCcCCeeC------HhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccC
Confidence 99999999999873 3567888999999999999999766 677899999999999 566666667899999999
Q ss_pred EEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCcc
Q 035691 210 ELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSS 289 (640)
Q Consensus 210 ~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 289 (640)
+|+|++|+++. +| .+..+++|+.| +|++|+|++..|..|.++++|+.|+|++|+|++..+..
T Consensus 189 ~L~L~~n~l~~-~~-~~~~l~~L~~L----------------~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 250 (440)
T 3zyj_A 189 YLNLAMCNLRE-IP-NLTPLIKLDEL----------------DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNA 250 (440)
T ss_dssp EEECTTSCCSS-CC-CCTTCSSCCEE----------------ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTS
T ss_pred eecCCCCcCcc-cc-ccCCCcccCEE----------------ECCCCccCccChhhhccCccCCEEECCCCceeEEChhh
Confidence 99999999984 44 46777777777 88889999888999999999999999999999999999
Q ss_pred ccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCccc
Q 035691 290 LGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDV 339 (640)
Q Consensus 290 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 339 (640)
|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|.|.|...++
T Consensus 251 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l 300 (440)
T 3zyj_A 251 FDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWL 300 (440)
T ss_dssp STTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHH
T ss_pred hcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCchHH
Confidence 99999999999999999998899999999999999999999999865443
No 68
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=100.00 E-value=6e-32 Score=291.05 Aligned_cols=253 Identities=23% Similarity=0.213 Sum_probs=225.4
Q ss_pred CCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCC
Q 035691 52 ELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNL 131 (640)
Q Consensus 52 ~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 131 (640)
....++.+++.++. +|..+. ++++.|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|.++++|
T Consensus 55 ~~~~v~c~~~~l~~------iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 125 (452)
T 3zyi_A 55 QFSKVVCTRRGLSE------VPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASL 125 (452)
T ss_dssp SSCEEECCSSCCSS------CCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred CCcEEEECCCCcCc------cCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccC
Confidence 45788998888876 787653 689999999999999999999999999999999999999888999999999
Q ss_pred CEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCc-CCCCCCCCCEEEccC-CcCcccCCcCccCCCCCC
Q 035691 132 TRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPI-SVGYLPKLQVLSLFE-NNISGEIPSSLGNFTFLT 209 (640)
Q Consensus 132 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~ 209 (640)
++|+|++|+|+.++ +..|.++++|++|+|++|.++.+|. .+..+++|++|++++ |.+..+.+..|.++++|+
T Consensus 126 ~~L~L~~n~l~~~~------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~ 199 (452)
T 3zyi_A 126 NTLELFDNWLTVIP------SGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 199 (452)
T ss_dssp CEEECCSSCCSBCC------TTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCC
T ss_pred CEEECCCCcCCccC------hhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCC
Confidence 99999999999873 3557788999999999999999776 677899999999999 667766667899999999
Q ss_pred EEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCcc
Q 035691 210 ELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSS 289 (640)
Q Consensus 210 ~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 289 (640)
+|+|++|++++. | .+..+++|+.| +|++|++++..|..|.++++|+.|+|++|++++..|..
T Consensus 200 ~L~L~~n~l~~~-~-~~~~l~~L~~L----------------~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 261 (452)
T 3zyi_A 200 YLNLGMCNIKDM-P-NLTPLVGLEEL----------------EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNA 261 (452)
T ss_dssp EEECTTSCCSSC-C-CCTTCTTCCEE----------------ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTT
T ss_pred EEECCCCccccc-c-cccccccccEE----------------ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHH
Confidence 999999999854 4 47777777777 88889999888999999999999999999999999999
Q ss_pred ccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCc
Q 035691 290 LGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNG 337 (640)
Q Consensus 290 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 337 (640)
|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|.|.|...
T Consensus 262 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 262 FDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTH
T ss_pred hcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCch
Confidence 999999999999999999988899999999999999999999998654
No 69
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-33 Score=288.83 Aligned_cols=277 Identities=20% Similarity=0.169 Sum_probs=165.1
Q ss_pred CCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCC
Q 035691 29 LRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLE 108 (640)
Q Consensus 29 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 108 (640)
....++++|.++ .+|..+. ++|++|+|++|+|+. +|+..+..+++|+.|+|++|++++..|..|.++++|+
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITY------ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCE------ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcc------cCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCC
Confidence 334555555555 3343332 355555555555543 4444444455555555555555555555555555555
Q ss_pred EEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCC-CCCCc-CcCCCCCCCCCE
Q 035691 109 WLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVN-SLRSI-PISVGYLPKLQV 186 (640)
Q Consensus 109 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N-~l~~i-p~~~~~l~~L~~ 186 (640)
+|+|++|+|+++.+..|.++++|++|+|++|+++.++. ...+.++++|++|++++| .++.+ |..+..+++|++
T Consensus 104 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~-----~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 178 (353)
T 2z80_A 104 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGE-----TSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEE 178 (353)
T ss_dssp EEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCS-----SCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEE
T ss_pred EEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCc-----hhhhccCCCCcEEECCCCccccccCHHHccCCCCCCE
Confidence 55555555554444445555555555555555554321 023445555555555555 34443 234445555555
Q ss_pred EEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccC
Q 035691 187 LSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAV 266 (640)
Q Consensus 187 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~ 266 (640)
|++++|.+++..|..|..+++|++|++++|++....+..+..+++|+.| ++++|++++..+..+
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L----------------~L~~n~l~~~~~~~l 242 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECL----------------ELRDTDLDTFHFSEL 242 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEE----------------EEESCBCTTCCCC--
T ss_pred EECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEE----------------ECCCCcccccccccc
Confidence 5555555555555555555555555555555543332233344555555 777777776655443
Q ss_pred C---CCCCCCEEECCCCcccC----cCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccC
Q 035691 267 G---NLKSIPHLDLSKNKLSG----EIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQ 335 (640)
Q Consensus 267 ~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 335 (640)
. ....++.++|++|.+++ .+|..+..+++|++|+|++|+++...+..|..+++|++|+|++|++.|.+.
T Consensus 243 ~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 243 STGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 3 45678889999998875 367788999999999999999996555567999999999999999997664
No 70
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.98 E-value=5.4e-33 Score=289.33 Aligned_cols=280 Identities=15% Similarity=0.154 Sum_probs=231.0
Q ss_pred CcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCC
Q 035691 5 LMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIR 84 (640)
Q Consensus 5 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~ 84 (640)
....|+++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|+|+. +++..+..+++|+
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~------~~~~~~~~l~~L~ 103 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT------IEEDSFSSLGSLE 103 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE------ECTTTTTTCTTCC
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc------cCHhhcCCCCCCC
Confidence 456889999999 6676555 589999999999998777799999999999999999875 7777777899999
Q ss_pred eeeccCCcccccCCccCcCCCCCCEEECcCCccCccCC-ccccCCCCCCEEEcccC-cCCCCCCCcccccccccCCCCcc
Q 035691 85 IPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIP-EDLGRLRNLTRLNFARN-DLGTRKVNDLRFLDSLVNCTYLE 162 (640)
Q Consensus 85 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~l~~l~~L~ 162 (640)
.|+|++|++++..+..|.++++|++|+|++|+++.+.+ ..|..+++|++|++++| .++.+ .+..|.++++|+
T Consensus 104 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~------~~~~~~~l~~L~ 177 (353)
T 2z80_A 104 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKI------QRKDFAGLTFLE 177 (353)
T ss_dssp EEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEE------CTTTTTTCCEEE
T ss_pred EEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccccc------CHHHccCCCCCC
Confidence 99999999998777779999999999999999997555 58999999999999999 47665 345688899999
Q ss_pred eEecCCCCCCCc-CcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCcccc---CCCCccEEecc
Q 035691 163 IVSLNVNSLRSI-PISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALG---NCHQLQSLDLS 238 (640)
Q Consensus 163 ~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~ls 238 (640)
+|++++|.++.+ |..+..+++|++|++++|.+....+..+..+++|+.|+|++|++++..+..+. ....++.++++
T Consensus 178 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~ 257 (353)
T 2z80_A 178 ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFR 257 (353)
T ss_dssp EEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEE
T ss_pred EEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccc
Confidence 999999999995 77889999999999999999865555566789999999999999977665443 24455555444
Q ss_pred CccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCC
Q 035691 239 KTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIH 311 (640)
Q Consensus 239 ~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 311 (640)
++ ++++|.+. .+|..+..+++|+.|+|++|+|+...+..|..+++|++|+|++|++++..|
T Consensus 258 ~~-----------~l~~~~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 258 NV-----------KITDESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp SC-----------BCCHHHHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cc-----------cccCcchh-hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 33 33344443 467889999999999999999995444446999999999999999986543
No 71
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.98 E-value=3.6e-31 Score=283.94 Aligned_cols=248 Identities=22% Similarity=0.234 Sum_probs=182.1
Q ss_pred CCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCC
Q 035691 28 QLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKL 107 (640)
Q Consensus 28 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 107 (640)
..+.++.+++.++ .+|..+. ++++.|+|++|+|+. +++..|..+++|+.|+|++|+|+++.+..|.++++|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~------~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L 114 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQI------IKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL 114 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCE------ECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCe------eCHHHhhCCCCCCEEECCCCcCCccChhhccCCccC
Confidence 3556777777776 5555444 567777777777664 555566667777777777777777777777777777
Q ss_pred CEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCC-CCCCCcCc-CCCCCCCCC
Q 035691 108 EWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNV-NSLRSIPI-SVGYLPKLQ 185 (640)
Q Consensus 108 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~-N~l~~ip~-~~~~l~~L~ 185 (640)
++|+|++|+|+.+.+..|..+++|++|+|++|+|+.++ ...|.++++|+.|++++ |.+..++. .+..+++|+
T Consensus 115 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~------~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~ 188 (440)
T 3zyj_A 115 NTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP------SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLR 188 (440)
T ss_dssp CEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEEC------TTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCC
T ss_pred CEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccC------HHHhhhCcccCEeCCCCCCCcceeCcchhhcccccC
Confidence 77777777777666667777777777777777777652 34566777777777777 44555555 466677888
Q ss_pred EEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCcc
Q 035691 186 VLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLA 265 (640)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~ 265 (640)
+|+|++|.++. +| .+..+++|++|+|++|+|++..|..|.++++|+.| +|++|+|++..+..
T Consensus 189 ~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L----------------~L~~n~l~~~~~~~ 250 (440)
T 3zyj_A 189 YLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKL----------------WMIQSQIQVIERNA 250 (440)
T ss_dssp EEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEE----------------ECTTCCCCEECTTS
T ss_pred eecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEE----------------ECCCCceeEEChhh
Confidence 88888888873 44 37777888888888888887777788888877777 67777777777778
Q ss_pred CCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCC
Q 035691 266 VGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHG 308 (640)
Q Consensus 266 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 308 (640)
|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 251 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 251 FDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp STTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred hcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 8888888888888888887777777888888888888888764
No 72
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=5.9e-32 Score=275.65 Aligned_cols=272 Identities=23% Similarity=0.265 Sum_probs=176.0
Q ss_pred eEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCccccc--CCccCcCCCCCC
Q 035691 31 YIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGN--IPHSISNASKLE 108 (640)
Q Consensus 31 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~ 108 (640)
.++++++.++ .+|..+. ++|++|+|++|+|+. +|...+..+++|+.|+|++|+++.. .+..+..+++|+
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~------i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~ 81 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQS------LPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLK 81 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCC------CCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCC
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCc------cCHhHhhccccCCEEECCCCccCcccCcccccccccccC
Confidence 4555555555 3343332 455556665555543 5555555555666666666655522 244555566677
Q ss_pred EEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCC-cCcCCCCCCCCCEE
Q 035691 109 WLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRS-IPISVGYLPKLQVL 187 (640)
Q Consensus 109 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L 187 (640)
+|+|++|.++. +|..|..+++|++|+|++|+++.++. ...+.++++|++|++++|.++. .|..+..+++|++|
T Consensus 82 ~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~-----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 82 YLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSE-----FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp EEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTT-----TTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred EEECCCCcccc-ChhhcCCCCCCCEEECCCCccccccc-----chhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 77777776663 45556666777777777776665421 1345566677777777777765 34456667778888
Q ss_pred EccCCcCcc-cCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccC
Q 035691 188 SLFENNISG-EIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAV 266 (640)
Q Consensus 188 ~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~ 266 (640)
++++|.+.+ ..|..|..+++|++|+|++|++++..|..|..+++|+.| +|++|++++..+..|
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L----------------~L~~N~l~~~~~~~~ 219 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL----------------NMSHNNFFSLDTFPY 219 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE----------------ECTTSCCSBCCSGGG
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEE----------------ECCCCccCccChhhc
Confidence 888887775 567777778888888888888877777777777777777 666777776666677
Q ss_pred CCCCCCCEEECCCCcccCcCCccccCCC-CCCeEEecCCccCCCCCc--cCCCCCCCCeEeCcCCccccc
Q 035691 267 GNLKSIPHLDLSKNKLSGEIPSSLGSCV-GLEYLNLSINSFHGPIHP--GLSSLKSLEGLDLFQNTFQAK 333 (640)
Q Consensus 267 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~ 333 (640)
..+++|+.|+|++|++++..|..+..++ +|++|+|++|++++..+. ....+...+.+.+..+.+.|.
T Consensus 220 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~ 289 (306)
T 2z66_A 220 KCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECA 289 (306)
T ss_dssp TTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEE
T ss_pred cCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccC
Confidence 7788888888888888877777777774 788888888888754321 122233455556666666653
No 73
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.98 E-value=4.4e-31 Score=284.27 Aligned_cols=248 Identities=21% Similarity=0.199 Sum_probs=196.0
Q ss_pred CCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCC
Q 035691 28 QLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKL 107 (640)
Q Consensus 28 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 107 (640)
....++.+++.++ .+|..+. ++|++|+|++|+|+. +++..|..+++|+.|+|++|+|+++.+..|.++++|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~------~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 125 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQM------IQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASL 125 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCE------ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCce------ECHHHcCCCCCCCEEECCCCccCCcChhhccCcccC
Confidence 3566777777777 4565444 578888888777764 666666678888888888888888877888888888
Q ss_pred CEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCC-CCCCCcCc-CCCCCCCCC
Q 035691 108 EWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNV-NSLRSIPI-SVGYLPKLQ 185 (640)
Q Consensus 108 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~-N~l~~ip~-~~~~l~~L~ 185 (640)
++|+|++|+|+.+.+..|..+++|++|+|++|+|+.++ ...|.++++|+.|++++ |.+..+|. .+..+++|+
T Consensus 126 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~------~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~ 199 (452)
T 3zyi_A 126 NTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIP------SYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLK 199 (452)
T ss_dssp CEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEEC------TTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCC
T ss_pred CEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeC------HhHHhcCCcccEEeCCCCCCccccChhhccCCCCCC
Confidence 88888888888777777888888888888888887663 34567778888888887 55666665 467788888
Q ss_pred EEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCcc
Q 035691 186 VLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLA 265 (640)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~ 265 (640)
+|+|++|.+++. | .+..+++|++|+|++|+|++..|..|.++++|+.| +|++|++++..+..
T Consensus 200 ~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L----------------~L~~n~l~~~~~~~ 261 (452)
T 3zyi_A 200 YLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKL----------------WVMNSQVSLIERNA 261 (452)
T ss_dssp EEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEE----------------ECTTSCCCEECTTT
T ss_pred EEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEE----------------EeCCCcCceECHHH
Confidence 888888888854 4 47788888888888888888888888888888888 77778888778888
Q ss_pred CCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCC
Q 035691 266 VGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHG 308 (640)
Q Consensus 266 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 308 (640)
|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 262 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 262 FDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred hcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 8888999999999999987777788888889999999998864
No 74
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=3.4e-33 Score=302.62 Aligned_cols=246 Identities=22% Similarity=0.206 Sum_probs=197.3
Q ss_pred CCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCC
Q 035691 80 LPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCT 159 (640)
Q Consensus 80 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~ 159 (640)
.++|+.|+|++|.|++..|..|.++++|++|+|++|.|++..| |..+++|++|+|++|.|++++ ..+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----------~~~ 99 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----------VGP 99 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----------ECT
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----------CCC
Confidence 3478889999999988888889999999999999999987665 889999999999999887652 237
Q ss_pred CcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCcccc-CCCCccEEecc
Q 035691 160 YLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALG-NCHQLQSLDLS 238 (640)
Q Consensus 160 ~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls 238 (640)
+|+.|++++|.++.+|.. .+++|++|+|++|.|++..|..|..+++|++|+|++|.+++.+|..|. .+++|+.|
T Consensus 100 ~L~~L~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L--- 174 (487)
T 3oja_A 100 SIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL--- 174 (487)
T ss_dssp TCCEEECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE---
T ss_pred CcCEEECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE---
Confidence 899999999999987653 358899999999999998898999999999999999999988888876 78888888
Q ss_pred CccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCC
Q 035691 239 KTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLK 318 (640)
Q Consensus 239 ~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 318 (640)
+|++|.|++..+ +..+++|+.|+|++|+|++ +|..|..+++|+.|+|++|.|++ +|..+..++
T Consensus 175 -------------~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~ 237 (487)
T 3oja_A 175 -------------NLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQ 237 (487)
T ss_dssp -------------ECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCT
T ss_pred -------------ecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCC
Confidence 777777775533 3458999999999999995 55558899999999999999985 677789999
Q ss_pred CCCeEeCcCCccccccCCcccCCCCCCCCCcccccc-------CCCCCcCCC
Q 035691 319 SLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVA-------GNEKLCGGI 363 (640)
Q Consensus 319 ~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~-------~n~~~c~~~ 363 (640)
+|+.|++++|++.|.+....+ ..++.+..+.+. +|++.|.++
T Consensus 238 ~L~~L~l~~N~l~c~~~~~~~---~~l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 238 NLEHFDLRGNGFHCGTLRDFF---SKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp TCCEEECTTCCBCHHHHHHHH---TTCHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred CCCEEEcCCCCCcCcchHHHH---HhCCCCcEEeccccccccCCCcccccCC
Confidence 999999999999864322111 223344444444 666666543
No 75
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=7.9e-31 Score=264.41 Aligned_cols=252 Identities=20% Similarity=0.177 Sum_probs=172.5
Q ss_pred CEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCE
Q 035691 54 RTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTR 133 (640)
Q Consensus 54 ~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 133 (640)
++++.+++.++. +|..+ .++|+.|+|++|+|++..+..|.++++|++|+|++|+++++.|..|.++++|++
T Consensus 14 ~~~~c~~~~l~~------ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 84 (285)
T 1ozn_A 14 VTTSCPQQGLQA------VPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQ 84 (285)
T ss_dssp CEEECCSSCCSS------CCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred eEEEcCcCCccc------CCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCE
Confidence 456666666654 55432 345566666666666555566666666666666666666655666666666666
Q ss_pred EEcccCc-CCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEE
Q 035691 134 LNFARND-LGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELN 212 (640)
Q Consensus 134 L~L~~N~-l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 212 (640)
|+|++|+ ++.++ |..+..+++|++|++++|.+++..|..|.++++|++|+
T Consensus 85 L~l~~n~~l~~~~-----------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 85 LDLSDNAQLRSVD-----------------------------PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp EECCSCTTCCCCC-----------------------------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred EeCCCCCCccccC-----------------------------HHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 6666664 44331 33455566777777777777766677777777777777
Q ss_pred ccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccC
Q 035691 213 LRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGS 292 (640)
Q Consensus 213 L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 292 (640)
|++|++++..+..|..+++|+.| +|++|++++..+..|..+++|+.|+|++|++++..|..|..
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L----------------~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 199 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHL----------------FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRD 199 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEE----------------ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred CCCCcccccCHhHhccCCCccEE----------------ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccC
Confidence 77777776666667777777777 66677777666667888888888888888888777888888
Q ss_pred CCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCCCCcCCCc
Q 035691 293 CVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNEKLCGGIS 364 (640)
Q Consensus 293 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~~~c~~~~ 364 (640)
+++|++|+|++|++++..+..+..+++|++|++++|++.|.+...+.. ..+.......+...|..|.
T Consensus 200 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~-----~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 200 LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLW-----AWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp CTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHH-----HHHHHCCSEECCCBEEESG
T ss_pred cccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHH-----HHHHhcccccCccccCCch
Confidence 888888888888888877777888889999999999988766442221 1223334456666676654
No 76
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.97 E-value=2e-32 Score=291.17 Aligned_cols=182 Identities=25% Similarity=0.272 Sum_probs=153.3
Q ss_pred CHHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeec
Q 035691 432 SYESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACS 508 (640)
Q Consensus 432 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 508 (640)
.+.++....++|++.++||+|+||+||+|+++.+++.||||++.... ....+.+.+|+.++..++|||||+++++|
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~- 143 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF- 143 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE-
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-
Confidence 34556666788999999999999999999999999999999996432 22234588999999999999999999995
Q ss_pred cCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCee
Q 035691 509 SSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVL 588 (640)
Q Consensus 509 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiL 588 (640)
.+....++|||||++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||
T Consensus 144 ----~~~~~~~lV~Ey~~gg~L~~~l~~~~---------~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NIL 207 (437)
T 4aw2_A 144 ----QDDNNLYLVMDYYVGGDLLTLLSKFE---------DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNIL 207 (437)
T ss_dssp ----ECSSEEEEEECCCTTCBHHHHHHTTT---------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEE
T ss_pred ----eeCCEEEEEEecCCCCcHHHHHHHcc---------CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHee
Confidence 44558899999999999999997532 238899999999999999999999 69999999999999
Q ss_pred eCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 589 LDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 589 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
++.++.+||+|||+|+...... .......+||+.|+|||++.
T Consensus 208 l~~~g~vkL~DFGla~~~~~~~---~~~~~~~~GT~~Y~APE~l~ 249 (437)
T 4aw2_A 208 MDMNGHIRLADFGSCLKLMEDG---TVQSSVAVGTPDYISPEILQ 249 (437)
T ss_dssp ECTTSCEEECCCTTCEECCTTS---CEECCSCCSCGGGCCHHHHH
T ss_pred EcCCCCEEEcchhhhhhcccCC---CcccccccCCcCeeChHHHh
Confidence 9999999999999998654321 12223457999999999987
No 77
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1e-34 Score=313.72 Aligned_cols=348 Identities=16% Similarity=0.094 Sum_probs=212.9
Q ss_pred CCCCcEEeCCCCccccCCchh-hhcCCCCCeEEcccCccCc----cCCcCCCCCCCCCEEEccCCCcCCccccccCCchh
Q 035691 2 LTFLMLINLQQNNFSGNIPHE-IGRLFQLRYIIFNSNTLQG----QIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYI 76 (640)
Q Consensus 2 l~~L~~L~L~~n~i~~~~p~~-~~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~ 76 (640)
+++|+.|||++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|||++|++.+ ..+..+
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~-----~~~~~l 76 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGD-----VGVHCV 76 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHH-----HHHHHH
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCCh-----HHHHHH
Confidence 356788888888887554433 7788888888888888874 345667777888888888877753 122233
Q ss_pred hcCCC----CCCeeeccCCcccc----cCCccCcCCCCCCEEECcCCccCccCCcccc-----CCCCCCEEEcccCcCCC
Q 035691 77 GFTLP----NIRIPLLAGNQFFG----NIPHSISNASKLEWLDFANNSLTASIPEDLG-----RLRNLTRLNFARNDLGT 143 (640)
Q Consensus 77 ~~~l~----~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~ 143 (640)
+..++ +|+.|+|++|+|+. .++..|..+++|++|+|++|.++...+..+. ..++|++|+|++|+++.
T Consensus 77 ~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 156 (461)
T 1z7x_W 77 LQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSA 156 (461)
T ss_dssp HHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred HHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCH
Confidence 33344 68888888888873 4577788888888888888888754443322 35578888888887765
Q ss_pred CCCCcccccccccCCCCcceEecCCCCCCCc-CcCCC-----CCCCCCEEEccCCcCccc----CCcCccCCCCCCEEEc
Q 035691 144 RKVNDLRFLDSLVNCTYLEIVSLNVNSLRSI-PISVG-----YLPKLQVLSLFENNISGE----IPSSLGNFTFLTELNL 213 (640)
Q Consensus 144 ~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~i-p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L 213 (640)
..... .+..+..+++|++|++++|.++.. +..+. ..++|++|++++|.+++. ++..+..+++|++|+|
T Consensus 157 ~~~~~--l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 234 (461)
T 1z7x_W 157 ASCEP--LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELAL 234 (461)
T ss_dssp GGHHH--HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEEC
T ss_pred HHHHH--HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEec
Confidence 42111 234455667777777777776652 11121 245677777777777643 3555666677777777
Q ss_pred cCCCCCCCC-----CccccCCCCccEEeccCccccC------------CCCCceEEccCCcCCCCCCccCC-----CCCC
Q 035691 214 RGNSIRGSI-----PSALGNCHQLQSLDLSKTIFLG------------QYPVRWLDLSHNHLTGPIPLAVG-----NLKS 271 (640)
Q Consensus 214 ~~N~l~~~~-----~~~~~~l~~L~~L~ls~n~~~~------------~~~l~~L~Ls~N~l~~~~~~~~~-----~l~~ 271 (640)
++|+++... +..+..+++|+.|++++|.+.. ...|++|++++|.+++..+..+. ..++
T Consensus 235 s~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~ 314 (461)
T 1z7x_W 235 GSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQ 314 (461)
T ss_dssp CSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCC
T ss_pred cCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCcc
Confidence 777765432 2223346677777777765543 34567777777766543332222 2256
Q ss_pred CCEEECCCCcccCc----CCccccCCCCCCeEEecCCccCCCCCccCCC-----CCCCCeEeCcCCccccccCCcccCCC
Q 035691 272 IPHLDLSKNKLSGE----IPSSLGSCVGLEYLNLSINSFHGPIHPGLSS-----LKSLEGLDLFQNTFQAKSQNGDVPRK 342 (640)
Q Consensus 272 L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~~~~~~~p~~ 342 (640)
|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|.++.... ..+|..
T Consensus 315 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~-~~l~~~ 393 (461)
T 1z7x_W 315 LESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSC-SSLAAT 393 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHH-HHHHHH
T ss_pred ceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhH-HHHHHH
Confidence 77777777776644 3445555667777777777665443333322 5567777777776652110 012211
Q ss_pred -CCCCCCccccccCCC
Q 035691 343 -GIFKNASAISVAGNE 357 (640)
Q Consensus 343 -~~~~~~~~~~~~~n~ 357 (640)
..++++..+++.+|+
T Consensus 394 l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 394 LLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHCCCCCEEECCSSS
T ss_pred HHhCCCccEEECCCCC
Confidence 224455666666664
No 78
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=5.7e-34 Score=307.89 Aligned_cols=328 Identities=20% Similarity=0.146 Sum_probs=259.9
Q ss_pred CCCCcEEeCCCCcccc----CCchhhhcCCCCCeEEcccCccCccCCcCC-CCCC----CCCEEEccCCCcCCccccccC
Q 035691 2 LTFLMLINLQQNNFSG----NIPHEIGRLFQLRYIIFNSNTLQGQIPVNL-THCS----ELRTLDLVLNKLEENQLVGEL 72 (640)
Q Consensus 2 l~~L~~L~L~~n~i~~----~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~----~L~~L~Ls~N~l~~~~~~~~l 72 (640)
+++|++|+|++|+|++ .++..+..+++|++|+|++|.+++..+..+ ..++ +|++|+|++|+|+.... +.+
T Consensus 27 ~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~-~~l 105 (461)
T 1z7x_W 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGC-GVL 105 (461)
T ss_dssp HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGH-HHH
T ss_pred cCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHH-HHH
Confidence 5789999999999985 356778889999999999999986444333 3344 79999999999874211 123
Q ss_pred CchhhcCCCCCCeeeccCCcccccCCccCc-----CCCCCCEEECcCCccCccC----CccccCCCCCCEEEcccCcCCC
Q 035691 73 PPYIGFTLPNIRIPLLAGNQFFGNIPHSIS-----NASKLEWLDFANNSLTASI----PEDLGRLRNLTRLNFARNDLGT 143 (640)
Q Consensus 73 p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~ 143 (640)
|.. +..+++|+.|+|++|.+++..+..+. ..++|++|+|++|++++.. +..+..+++|++|+|++|.++.
T Consensus 106 ~~~-l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 106 SST-LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHH-TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHH-HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcch
Confidence 333 44689999999999999866554433 3678999999999999743 5667788999999999999876
Q ss_pred CCCCccccccccc-CCCCcceEecCCCCCCC-----cCcCCCCCCCCCEEEccCCcCcccC-----CcCccCCCCCCEEE
Q 035691 144 RKVNDLRFLDSLV-NCTYLEIVSLNVNSLRS-----IPISVGYLPKLQVLSLFENNISGEI-----PSSLGNFTFLTELN 212 (640)
Q Consensus 144 ~~~~~~~~~~~l~-~l~~L~~L~L~~N~l~~-----ip~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~ 212 (640)
.....+ ...+. ..++|+.|++++|.++. ++..+..+++|++|++++|.+.+.. +..+..+++|++|+
T Consensus 185 ~~~~~l--~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~ 262 (461)
T 1z7x_W 185 AGVRVL--CQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLW 262 (461)
T ss_dssp HHHHHH--HHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred HHHHHH--HHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEE
Confidence 422111 11111 35699999999999987 4666777899999999999998543 33344689999999
Q ss_pred ccCCCCCCC----CCccccCCCCccEEeccCccccC-------------CCCCceEEccCCcCCCC----CCccCCCCCC
Q 035691 213 LRGNSIRGS----IPSALGNCHQLQSLDLSKTIFLG-------------QYPVRWLDLSHNHLTGP----IPLAVGNLKS 271 (640)
Q Consensus 213 L~~N~l~~~----~~~~~~~l~~L~~L~ls~n~~~~-------------~~~l~~L~Ls~N~l~~~----~~~~~~~l~~ 271 (640)
|++|.++.. ++..+..+++|+.|++++|.+.+ ...|++|++++|.+++. ++..+..+++
T Consensus 263 L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 342 (461)
T 1z7x_W 263 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRF 342 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSS
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCC
Confidence 999999864 56778889999999999998742 14799999999999865 4667778899
Q ss_pred CCEEECCCCcccCcCCccccC-----CCCCCeEEecCCccCC----CCCccCCCCCCCCeEeCcCCccccc
Q 035691 272 IPHLDLSKNKLSGEIPSSLGS-----CVGLEYLNLSINSFHG----PIHPGLSSLKSLEGLDLFQNTFQAK 333 (640)
Q Consensus 272 L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~ 333 (640)
|+.|+|++|++++..+..+.. .++|++|+|++|.+++ .+|..+..+++|++||+++|+++..
T Consensus 343 L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 343 LLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp CCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred ccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 999999999998765555543 6799999999999986 6788888999999999999999843
No 79
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=6.7e-31 Score=264.93 Aligned_cols=253 Identities=21% Similarity=0.193 Sum_probs=158.8
Q ss_pred CeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCE
Q 035691 30 RYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEW 109 (640)
Q Consensus 30 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 109 (640)
+.++++++.++ .+|..+ .++|++|+|++|+|+. +|+..+..+++|+.|+|++|.+++..|..|.++++|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 84 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISH------VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQ 84 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCE------ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCc------cCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCE
Confidence 45666666666 344433 3567777777766654 55555556777777777777777777777888888888
Q ss_pred EECcCCc-cCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcC-CCCCCCCCEE
Q 035691 110 LDFANNS-LTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPIS-VGYLPKLQVL 187 (640)
Q Consensus 110 L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L 187 (640)
|+|++|+ ++...|..|..+++|++|+|++|+++.+ .+..+.++++|++|++++|.++.+|.. +..+++|++|
T Consensus 85 L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 85 LDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQEL------GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp EECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCC------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred EeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEE------CHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 8888886 7766677788888888888888887765 234455666666666666666665543 5556667777
Q ss_pred EccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCC
Q 035691 188 SLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVG 267 (640)
Q Consensus 188 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~ 267 (640)
+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|+.| ++++|++++..+..|.
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L----------------~l~~n~l~~~~~~~~~ 222 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL----------------YLFANNLSALPTEALA 222 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE----------------ECCSSCCSCCCHHHHT
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEe----------------eCCCCcCCcCCHHHcc
Confidence 777776665555566666666666666666666656666666666655 5555566655555566
Q ss_pred CCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccC
Q 035691 268 NLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGL 314 (640)
Q Consensus 268 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 314 (640)
.+++|+.|+|++|.+....+.. .-+..++.+..+.|.+....|..+
T Consensus 223 ~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 223 PLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp TCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGG
T ss_pred cCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHh
Confidence 6666666666666665322210 011123333444555554444443
No 80
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=3.1e-31 Score=273.28 Aligned_cols=178 Identities=28% Similarity=0.340 Sum_probs=152.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||+||+|+.+.+|+.||+|+++.. .....+.+.+|+.+++.++||||+++++++ .....
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-----~~~~~ 79 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDR 79 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECSSE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE-----EeCCE
Confidence 5688899999999999999999999999999999643 234457789999999999999999999995 44558
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 80 ~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL 146 (337)
T 1o6l_A 80 LCFVMEYANGGELFFHLSRER----------VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKI 146 (337)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEE
Confidence 899999999999999886432 37888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
+|||+++..... .......+||+.|+|||++.+..++.+
T Consensus 147 ~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~ 185 (337)
T 1o6l_A 147 TDFGLCKEGISD----GATMKTFCGTPEYLAPEVLEDNDYGRA 185 (337)
T ss_dssp CCCTTCBCSCCT----TCCBCCCEECGGGCCGGGGSSSCBCTT
T ss_pred eeccchhhcccC----CCcccccccChhhCChhhhcCCCCCch
Confidence 999999854321 112234579999999999998887754
No 81
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.8e-30 Score=266.83 Aligned_cols=236 Identities=19% Similarity=0.197 Sum_probs=163.6
Q ss_pred CCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCC
Q 035691 51 SELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRN 130 (640)
Q Consensus 51 ~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 130 (640)
++++.|+|++|.|+. +|+.++. +++|+.|+|++|.|+ .+|..|+++++|++|+|++|+++ .+|..|..+++
T Consensus 81 ~~l~~L~L~~n~l~~------lp~~l~~-l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~ 151 (328)
T 4fcg_A 81 PGRVALELRSVPLPQ------FPDQAFR-LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNR 151 (328)
T ss_dssp TTCCEEEEESSCCSS------CCSCGGG-GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTT
T ss_pred cceeEEEccCCCchh------cChhhhh-CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcC
Confidence 456666666666553 5555543 666666666666666 55666666666666666666666 45666666666
Q ss_pred CCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCE
Q 035691 131 LTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTE 210 (640)
Q Consensus 131 L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 210 (640)
|++|+|++|++.+. .+..+.. . .++..+..+++|++|+|++|.|+ .+|..+..+++|++
T Consensus 152 L~~L~L~~n~~~~~------~p~~~~~------~--------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~ 210 (328)
T 4fcg_A 152 LRELSIRACPELTE------LPEPLAS------T--------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKS 210 (328)
T ss_dssp CCEEEEEEETTCCC------CCSCSEE------E--------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCE
T ss_pred CCEEECCCCCCccc------cChhHhh------c--------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCE
Confidence 66666666554433 1221111 0 01122334677888888888887 66777888888888
Q ss_pred EEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccc
Q 035691 211 LNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSL 290 (640)
Q Consensus 211 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 290 (640)
|+|++|++++ +|..+..+++|+.| +|++|++.+.+|..|+.+++|+.|+|++|.+.+.+|..+
T Consensus 211 L~L~~N~l~~-l~~~l~~l~~L~~L----------------~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~ 273 (328)
T 4fcg_A 211 LKIRNSPLSA-LGPAIHHLPKLEEL----------------DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDI 273 (328)
T ss_dssp EEEESSCCCC-CCGGGGGCTTCCEE----------------ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTG
T ss_pred EEccCCCCCc-CchhhccCCCCCEE----------------ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhh
Confidence 8888888874 45567777777777 777777777788888888888888888888888888888
Q ss_pred cCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccc
Q 035691 291 GSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAK 333 (640)
Q Consensus 291 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 333 (640)
..+++|++|+|++|++.+.+|..+..+++|+.+++..|.+...
T Consensus 274 ~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 274 HRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp GGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred hcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHH
Confidence 8888888888888888888888888888888888888777644
No 82
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=3.4e-30 Score=264.76 Aligned_cols=227 Identities=22% Similarity=0.229 Sum_probs=138.2
Q ss_pred CCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCC
Q 035691 27 FQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASK 106 (640)
Q Consensus 27 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 106 (640)
.+++.|+|++|.++ .+|..+..+++|++|+|++|.|+. +|..+. .+++|+.|+|++|+++ .+|..|.++++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~------lp~~~~-~l~~L~~L~Ls~n~l~-~lp~~l~~l~~ 151 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLME------LPDTMQ-QFAGLETLTLARNPLR-ALPASIASLNR 151 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCC------CCSCGG-GGTTCSEEEEESCCCC-CCCGGGGGCTT
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccc------hhHHHh-ccCCCCEEECCCCccc-cCcHHHhcCcC
Confidence 45555555555555 444445555555555555555543 444332 3555555555555555 44555555556
Q ss_pred CCEEECcCCccCccCCcccc---------CCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcC
Q 035691 107 LEWLDFANNSLTASIPEDLG---------RLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPIS 177 (640)
Q Consensus 107 L~~L~Ls~N~l~~~~~~~~~---------~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~ 177 (640)
|++|+|++|++.+.+|..+. ++++|++|+|++|+++.+ +..+.++++|++|++++|.++.+|..
T Consensus 152 L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~l-------p~~l~~l~~L~~L~L~~N~l~~l~~~ 224 (328)
T 4fcg_A 152 LRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSL-------PASIANLQNLKSLKIRNSPLSALGPA 224 (328)
T ss_dssp CCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCC-------CGGGGGCTTCCEEEEESSCCCCCCGG
T ss_pred CCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcc-------hHhhcCCCCCCEEEccCCCCCcCchh
Confidence 66666665555555555443 366666666666666643 34456666666666666666666666
Q ss_pred CCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCc
Q 035691 178 VGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNH 257 (640)
Q Consensus 178 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~ 257 (640)
+..+++|++|+|++|.+.+.+|..|.++++|++|+|++|++.+.+|..+.++++|+.| +|++|+
T Consensus 225 l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L----------------~L~~n~ 288 (328)
T 4fcg_A 225 IHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKL----------------DLRGCV 288 (328)
T ss_dssp GGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEE----------------ECTTCT
T ss_pred hccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEE----------------eCCCCC
Confidence 6666677777777766666666667777777777777766666666666666666666 666666
Q ss_pred CCCCCCccCCCCCCCCEEECCCCcccCc
Q 035691 258 LTGPIPLAVGNLKSIPHLDLSKNKLSGE 285 (640)
Q Consensus 258 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 285 (640)
+.+.+|..++.+++|+.+++..|.+...
T Consensus 289 ~~~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 289 NLSRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp TCCCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred chhhccHHHhhccCceEEeCCHHHHHHH
Confidence 6666777777777777777766665543
No 83
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=4.3e-29 Score=276.01 Aligned_cols=257 Identities=25% Similarity=0.267 Sum_probs=186.9
Q ss_pred CCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCC
Q 035691 4 FLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNI 83 (640)
Q Consensus 4 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L 83 (640)
.++.|++++|+|+ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|||++|+|+. +|. .+++|
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~------lp~----~l~~L 103 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS------LPV----LPPGL 103 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC------CCC----CCTTC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc------CCC----CCCCC
Confidence 4778888888888 6666554 67888888888887 4444 56788888888888765 665 46788
Q ss_pred CeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcce
Q 035691 84 RIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEI 163 (640)
Q Consensus 84 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~ 163 (640)
+.|+|++|+|+++.+ .+++|+.|+|++|+|+. +|.. +++|++|+|++|+++.++. .+++|+.
T Consensus 104 ~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~----------~~~~L~~ 165 (622)
T 3g06_A 104 LELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPA----------LPSELCK 165 (622)
T ss_dssp CEEEECSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCC----------CCTTCCE
T ss_pred CEEECcCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCC----------ccCCCCE
Confidence 888888888876433 46778888888888885 4432 4778888888888876531 2356778
Q ss_pred EecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcccc
Q 035691 164 VSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFL 243 (640)
Q Consensus 164 L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~ 243 (640)
|++++|.|+.+| ..+++|+.|++++|.|++ +|.. +++|+.|++++|.++. +|.. +++|+.|
T Consensus 166 L~L~~N~l~~l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L-------- 226 (622)
T 3g06_A 166 LWAYNNQLTSLP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKEL-------- 226 (622)
T ss_dssp EECCSSCCSCCC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEE--------
T ss_pred EECCCCCCCCCc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEE--------
Confidence 888888888877 345778888888888875 4432 3678888888888873 3332 3556665
Q ss_pred CCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeE
Q 035691 244 GQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGL 323 (640)
Q Consensus 244 ~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 323 (640)
+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|..+++|+.|
T Consensus 227 --------~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L 289 (622)
T 3g06_A 227 --------IVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTV 289 (622)
T ss_dssp --------ECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEE
T ss_pred --------EccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEE
Confidence 777777775 44 45578888888888888 4555 5577888888888888 567778888888888
Q ss_pred eCcCCccc
Q 035691 324 DLFQNTFQ 331 (640)
Q Consensus 324 ~l~~N~l~ 331 (640)
+|++|+++
T Consensus 290 ~L~~N~l~ 297 (622)
T 3g06_A 290 NLEGNPLS 297 (622)
T ss_dssp ECCSCCCC
T ss_pred EecCCCCC
Confidence 88888887
No 84
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=5.6e-31 Score=268.92 Aligned_cols=183 Identities=24% Similarity=0.409 Sum_probs=153.6
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|...+.||+|+||+||+|++..+++.||+|++...+....+.+.+|++++++++||||+++++++. .+...+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY-----KDKRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe-----cCCeeE
Confidence 356788899999999999999999999999999986666666788999999999999999999999964 345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 84 lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~D 151 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMD---------SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVAD 151 (310)
T ss_dssp EEEECCTTCBHHHHHHHCC---------TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHhcc---------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEee
Confidence 9999999999999996533 238899999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCC----------ceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSN----------QCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~----------~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++.+....... ........||+.|+|||++.+..++.
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 201 (310)
T 3s95_A 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE 201 (310)
T ss_dssp CTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCT
T ss_pred cccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCc
Confidence 99998764322111 00111457999999999999888775
No 85
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.97 E-value=5.1e-31 Score=267.40 Aligned_cols=177 Identities=25% Similarity=0.327 Sum_probs=153.7
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|+..+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++. ..+..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEE-----ECCEEE
Confidence 357889999999999999999999899999999997666666678999999999999999999999954 345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 94 lv~e~~~~~~L~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~D 159 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET-----------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTD 159 (297)
T ss_dssp EEEECCTTCBHHHHHHHS-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEECCCCCCHHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEee
Confidence 999999999999998642 27888999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++....... ......||+.|+|||++.+..++.
T Consensus 160 fg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~ 195 (297)
T 3fxz_A 160 FGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGP 195 (297)
T ss_dssp CTTCEECCSTTC----CBCCCCSCGGGCCHHHHHCSCBCT
T ss_pred CCCceecCCccc----ccCCccCCcCccChhhhcCCCCCc
Confidence 999986643221 223356999999999998887765
No 86
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.97 E-value=7.3e-31 Score=269.69 Aligned_cols=177 Identities=27% Similarity=0.368 Sum_probs=152.1
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
..++|++.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+++++.++||||+++++++. ...
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~~~ 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-----TEK 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECC
Confidence 4567999999999999999999999899999999996542 334567899999999999999999999953 455
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~----------~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~k 154 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVAHG----------RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIK 154 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEE
T ss_pred EEEEEEECCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEE
Confidence 7899999999999999986432 27888999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
|+|||+++..... ......+||+.|+|||++.+..++
T Consensus 155 l~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~ 191 (328)
T 3fe3_A 155 IADFGFSNEFTVG-----GKLDAFCGAPPYAAPELFQGKKYD 191 (328)
T ss_dssp ECSTTCCGGGSSS-----CGGGTTSSSGGGCCHHHHHTCCCC
T ss_pred EeeccCceecCCC-----CccccccCCcceeCcccccCCCcC
Confidence 9999999865422 122345799999999999887764
No 87
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=274.94 Aligned_cols=179 Identities=28% Similarity=0.321 Sum_probs=147.2
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCC
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 514 (640)
..++|++.+.||+|+||+||+|+++.+|+.||||+++.. .....+.+.+|..+++.+ +||||+++++++ .+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~ 95 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF-----QT 95 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE-----EC
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEE-----Ee
Confidence 346899999999999999999999999999999999643 233456788999999988 799999999994 44
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 96 ~~~~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ 162 (353)
T 3txo_A 96 PDRLFFVMEFVNGGDLMFHIQKSR----------RFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGH 162 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSC
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCC
Confidence 568999999999999999986432 27889999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+|+..... .......+||+.|+|||++.+..++.
T Consensus 163 ikL~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ 203 (353)
T 3txo_A 163 CKLADFGMCKEGICN----GVTTATFCGTPDYIAPEILQEMLYGP 203 (353)
T ss_dssp EEECCCTTCBCSCC-------------CCGGGCCHHHHHHHHCTT
T ss_pred EEEccccceeecccC----CccccccCCCcCeEChhhcCCCCcCC
Confidence 999999999854221 12233467999999999987765553
No 88
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.97 E-value=9.4e-31 Score=270.38 Aligned_cols=181 Identities=25% Similarity=0.335 Sum_probs=151.9
Q ss_pred HHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCc
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNI-RHRNLVKIITACSSSDF 512 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 512 (640)
....++|.+.+.||+|+||+||+|+++.+|+.||||+++... ....+.+..|..++..+ +||||+++++++
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~----- 87 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF----- 87 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE-----
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE-----
Confidence 345678999999999999999999999999999999996432 33456788999999887 999999999995
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND 592 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~ 592 (640)
.+....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 88 ~~~~~~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~ 154 (345)
T 1xjd_A 88 QTKENLFFVMEYLNGGDLMYHIQSCH----------KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKD 154 (345)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTT
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCC
Confidence 44568999999999999999986432 27888999999999999999999 699999999999999999
Q ss_pred CcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 593 MIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 593 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+.+||+|||+|+..... .......+||+.|+|||++.+..++.
T Consensus 155 g~vkL~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ 197 (345)
T 1xjd_A 155 GHIKIADFGMCKENMLG----DAKTNTFCGTPDYIAPEILLGQKYNH 197 (345)
T ss_dssp SCEEECCCTTCBCCCCT----TCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred CCEEEeEChhhhhcccC----CCcccCCCCCcccCChhhhcCCCCCC
Confidence 99999999999854221 11223467999999999999887764
No 89
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97 E-value=5.9e-31 Score=276.20 Aligned_cols=178 Identities=24% Similarity=0.287 Sum_probs=149.9
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~ 515 (640)
.++|++.++||+|+||+||+|+++.+++.||||+++... ....+.+..|..++.++ +|||||++++++ .+.
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE-----ECS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE-----EEC
Confidence 356888999999999999999999999999999996542 22335688999999887 899999999994 455
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
...++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~~----------~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~i 192 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQR----------KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHI 192 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCE
Confidence 68999999999999999886432 38899999999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+|||+|+..... .......+||+.|+|||++.+..++.
T Consensus 193 kL~DFGla~~~~~~----~~~~~~~~gt~~Y~aPE~l~~~~~~~ 232 (396)
T 4dc2_A 193 KLTDYGMCKEGLRP----GDTTSTFCGTPNYIAPEILRGEDYGF 232 (396)
T ss_dssp EECCCTTCBCCCCT----TCCBCCCCBCGGGCCHHHHTTCCBCT
T ss_pred EEeecceeeecccC----CCccccccCCcccCCchhhcCCCCCh
Confidence 99999999853221 11233467999999999999988764
No 90
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=2.8e-31 Score=280.16 Aligned_cols=182 Identities=23% Similarity=0.281 Sum_probs=153.1
Q ss_pred HHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeecc
Q 035691 433 YESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSS 509 (640)
Q Consensus 433 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 509 (640)
+.++....++|++.+.||+|+||+||+|+++.+++.||+|++.... ....+.+.+|+.+++.++|||||++++++
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-- 138 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-- 138 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE--
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence 3455566788999999999999999999999999999999996422 22335688999999999999999999995
Q ss_pred CCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee
Q 035691 510 SDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL 589 (640)
Q Consensus 510 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl 589 (640)
.+....++|||||++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||+
T Consensus 139 ---~~~~~~~lV~E~~~gg~L~~~l~~~-----------~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl 201 (410)
T 3v8s_A 139 ---QDDRYLYMVMEYMPGGDLVNLMSNY-----------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLL 201 (410)
T ss_dssp ---ECSSEEEEEECCCTTEEHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEE
T ss_pred ---EECCEEEEEEeCCCCCcHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeE
Confidence 4456899999999999999998532 27888999999999999999999 699999999999999
Q ss_pred CCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCC
Q 035691 590 DNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ 636 (640)
Q Consensus 590 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 636 (640)
+.++.+||+|||+|+..... ........+||+.|+|||++.+..
T Consensus 202 ~~~g~ikL~DFG~a~~~~~~---~~~~~~~~~gt~~Y~APE~l~~~~ 245 (410)
T 3v8s_A 202 DKSGHLKLADFGTCMKMNKE---GMVRCDTAVGTPDYISPEVLKSQG 245 (410)
T ss_dssp CTTSCEEECCCTTCEECCTT---SEEECCSCCSCGGGCCHHHHHTTT
T ss_pred CCCCCEEEeccceeEeeccC---CcccccCCcCCccccCHHHhhccC
Confidence 99999999999999865432 112233567999999999997654
No 91
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=1.5e-31 Score=273.95 Aligned_cols=257 Identities=19% Similarity=0.164 Sum_probs=135.4
Q ss_pred CcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCC
Q 035691 5 LMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIR 84 (640)
Q Consensus 5 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~ 84 (640)
++.++++.+.+....+..+..+++|++|+|++|+|++..|..|..+++|++|+|++|+++. +++ +..+++|+
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~------~~~--~~~l~~L~ 83 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE------TLD--LESLSTLR 83 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEE------EEE--ETTCTTCC
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCc------chh--hhhcCCCC
Confidence 5566666666665555555666677777777777776666667777777777777666643 222 33455666
Q ss_pred eeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceE
Q 035691 85 IPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIV 164 (640)
Q Consensus 85 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L 164 (640)
.|+|++|+|++.. ..++|++|++++|++++..+.. +++|++|+|++|+++.+ .+..+..+++|++|
T Consensus 84 ~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~------~~~~~~~l~~L~~L 149 (317)
T 3o53_A 84 TLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITML------RDLDEGCRSRVQYL 149 (317)
T ss_dssp EEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSG------GGBCTGGGSSEEEE
T ss_pred EEECcCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCc------cchhhhccCCCCEE
Confidence 6666666655432 1255556666666555443322 34455555555555544 22334444445555
Q ss_pred ecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCcc-CCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcccc
Q 035691 165 SLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLG-NFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFL 243 (640)
Q Consensus 165 ~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~ 243 (640)
++++|.++. ..+..+. .+++|++|+|++|.|++..+ ...+++|+.|
T Consensus 150 ~Ls~N~l~~-----------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L-------- 196 (317)
T 3o53_A 150 DLKLNEIDT-----------------------VNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTL-------- 196 (317)
T ss_dssp ECTTSCCCE-----------------------EEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEE--------
T ss_pred ECCCCCCCc-----------------------ccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEE--------
Confidence 555555444 4333332 34445555555555443211 1123444444
Q ss_pred CCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccC-CCCCccCCCCCCCCe
Q 035691 244 GQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFH-GPIHPGLSSLKSLEG 322 (640)
Q Consensus 244 ~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~ 322 (640)
+|++|++++ +|..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +..|..+..+++|+.
T Consensus 197 --------~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~ 266 (317)
T 3o53_A 197 --------DLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQT 266 (317)
T ss_dssp --------ECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHH
T ss_pred --------ECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceE
Confidence 444444442 2223555555555555555555 34445555555555555555555 444455555555555
Q ss_pred EeCc
Q 035691 323 LDLF 326 (640)
Q Consensus 323 L~l~ 326 (640)
|+++
T Consensus 267 l~l~ 270 (317)
T 3o53_A 267 VAKQ 270 (317)
T ss_dssp HHHH
T ss_pred EECC
Confidence 5555
No 92
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.97 E-value=1.5e-30 Score=266.19 Aligned_cols=175 Identities=29% Similarity=0.370 Sum_probs=151.3
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||+||+|+.+.+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++ .+...
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~~ 80 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQQ 80 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSSE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeCCE
Confidence 46888999999999999999999999999999996432 23456788999999999999999999995 44568
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 81 ~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL 147 (318)
T 1fot_A 81 IFMIMDYIEGGELFSLLRKSQ----------RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKI 147 (318)
T ss_dssp EEEEECCCCSCBHHHHHHHTS----------SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEE
Confidence 899999999999999986432 27888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
+|||+++..... ....+||+.|+|||++.+..++.+
T Consensus 148 ~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~ 183 (318)
T 1fot_A 148 TDFGFAKYVPDV-------TYTLCGTPDYIAPEVVSTKPYNKS 183 (318)
T ss_dssp CCCSSCEECSSC-------BCCCCSCTTTCCHHHHTTCCBCTT
T ss_pred eecCcceecCCc-------cccccCCccccCHhHhcCCCCCcc
Confidence 999999865431 123569999999999998887754
No 93
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97 E-value=2.3e-30 Score=265.64 Aligned_cols=188 Identities=27% Similarity=0.295 Sum_probs=158.1
Q ss_pred cccCHHHHHHhcCC----------CcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCC
Q 035691 429 LNVSYESLLKATGG----------FSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHR 498 (640)
Q Consensus 429 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ 498 (640)
..++.+++..+++. |...+.||+|+||.||+|++..+|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34566776666543 56667899999999999999989999999999766666667899999999999999
Q ss_pred CCcceeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 035691 499 NLVKIITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIV 578 (640)
Q Consensus 499 niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~iv 578 (640)
||+++++++.. ....++||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+
T Consensus 103 niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~-----------~l~~~~~~~i~~qi~~~L~~LH~---~~iv 163 (321)
T 2c30_A 103 NVVEMYKSYLV-----GEELWVLMEFLQGGALTDIVSQV-----------RLNEEQIATVCEAVLQALAYLHA---QGVI 163 (321)
T ss_dssp TBCCEEEEEEE-----TTEEEEEECCCCSCBHHHHHTTC-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred CcceEEEEEEE-----CCEEEEEEecCCCCCHHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHH---CCee
Confidence 99999999643 45789999999999999998532 27889999999999999999999 6999
Q ss_pred eCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 579 HCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 579 Hrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.
T Consensus 164 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~ 220 (321)
T 2c30_A 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----KRKSLVGTPYWMAPEVISRSLYAT 220 (321)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSSSC----CBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred cCCCCHHHEEECCCCcEEEeeeeeeeecccCcc----ccccccCCccccCHhhhcCCCCCc
Confidence 999999999999999999999999986643211 122356999999999998887765
No 94
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=4.4e-31 Score=278.92 Aligned_cols=183 Identities=25% Similarity=0.292 Sum_probs=153.9
Q ss_pred cCHHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEee
Q 035691 431 VSYESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITAC 507 (640)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 507 (640)
+.+++.....++|++.+.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566666788999999999999999999999999999999996432 23345688999999999999999999995
Q ss_pred ccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCe
Q 035691 508 SSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNV 587 (640)
Q Consensus 508 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~Ni 587 (640)
.+....|+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||
T Consensus 131 -----~~~~~~~lVmE~~~gg~L~~~l~~~~---------~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NI 193 (412)
T 2vd5_A 131 -----QDENYLYLVMEYYVGGDLLTLLSKFG---------ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNI 193 (412)
T ss_dssp -----ECSSEEEEEECCCCSCBHHHHHHHHS---------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred -----eeCCEEEEEEcCCCCCcHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHe
Confidence 44568999999999999999996432 137889999999999999999999 6999999999999
Q ss_pred eeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 588 LLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 588 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
|++.++.+||+|||+|+...... .......+||+.|+|||++.
T Consensus 194 Lld~~g~vkL~DFGla~~~~~~~---~~~~~~~~Gt~~Y~APE~l~ 236 (412)
T 2vd5_A 194 LLDRCGHIRLADFGSCLKLRADG---TVRSLVAVGTPDYLSPEILQ 236 (412)
T ss_dssp EECTTSCEEECCCTTCEECCTTS---CEECSSCCSCGGGCCHHHHH
T ss_pred eecCCCCEEEeechhheeccCCC---ccccceeccccCcCCHHHHh
Confidence 99999999999999998664321 11223457999999999987
No 95
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=5.5e-31 Score=272.18 Aligned_cols=179 Identities=26% Similarity=0.325 Sum_probs=144.3
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR-GALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
...++|++.+.||+|+||+||+|++..+|+.||||++..... ...+.+.+|+++++.++||||+++++++ ....
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-----~~~~ 81 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL-----ETAN 81 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeCC
Confidence 345789999999999999999999999999999999965432 2345788999999999999999999995 3445
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+|
T Consensus 82 ~~~lv~E~~~gg~L~~~l~~~~----------~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~k 148 (347)
T 3zgw_A 82 KIFMVLEYCPGGELFDYIISQD----------RLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLK 148 (347)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEE
Confidence 7899999999999999985432 27889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
|+|||+++...... .......+||+.|+|||++.+..+
T Consensus 149 L~DFG~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~ 186 (347)
T 3zgw_A 149 LIDFGLCAKPKGNK---DYHLQTCCGSLAYAAPELIQGKSY 186 (347)
T ss_dssp ECCCTTCBC-----------------CGGGCCHHHHTTC--
T ss_pred EEeccCcccccCCC---CccccccCCccCccCHHHHcCCCC
Confidence 99999998653221 112234579999999999988765
No 96
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.97 E-value=1.7e-30 Score=268.95 Aligned_cols=177 Identities=24% Similarity=0.285 Sum_probs=150.5
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCc
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~ 516 (640)
++|++.+.||+|+||.||+|+++.+++.||+|++.... ....+.+.+|..+++++ +|||||++++++ .+..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~~ 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTES 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----EeCC
Confidence 46888899999999999999999999999999996542 33456788999999988 899999999995 4456
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 84 ~~~lv~e~~~gg~L~~~l~~~~----------~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~k 150 (345)
T 3a8x_A 84 RLFFVIEYVNGGDLMFHMQRQR----------KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIK 150 (345)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEE
Confidence 8899999999999999986432 27889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++...... ......+||+.|+|||++.+..++.
T Consensus 151 L~DFG~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~ 189 (345)
T 3a8x_A 151 LTDYGMCKEGLRPG----DTTSTFCGTPNYIAPEILRGEDYGF 189 (345)
T ss_dssp ECCGGGCBCSCCTT----CCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred EEeccccccccCCC----CcccccCCCccccCccccCCCCCCh
Confidence 99999998542211 1223457999999999999887764
No 97
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=2e-30 Score=266.28 Aligned_cols=193 Identities=35% Similarity=0.573 Sum_probs=159.7
Q ss_pred ccCHHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeecc
Q 035691 430 NVSYESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSS 509 (640)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 509 (640)
.+.+.++...+++|+..+.||+|+||.||+|+++ +++.||||++........+.+.+|+++++.++||||++++++|.
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~- 105 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD- 105 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC-
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-
Confidence 4455566678899999999999999999999975 78999999987666666788999999999999999999999953
Q ss_pred CCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee
Q 035691 510 SDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL 589 (640)
Q Consensus 510 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl 589 (640)
.....++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+ .+|+||||||+||++
T Consensus 106 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~ 172 (321)
T 2qkw_B 106 ----ERNEMILIYKYMENGNLKRHLYGSDLP------TMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILL 172 (321)
T ss_dssp ----CTTCCEEEEECCTTCBTGGGSSSSCCC------SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEE
T ss_pred ----CCCeEEEEEEcCCCCcHHHHHhccCCC------ccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEE
Confidence 445789999999999999999654321 1348899999999999999999999 699999999999999
Q ss_pred CCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 590 DNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 590 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+.++.+||+|||+++........ .......||+.|+|||++.+..++.
T Consensus 173 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~ 220 (321)
T 2qkw_B 173 DENFVPKITDFGISKKGTELDQT--HLSTVVKGTLGYIDPEYFIKGRLTE 220 (321)
T ss_dssp CTTCCEEECCCTTCEECSSSSCC--CCBCCCEEETTTCCHHHHHHCBCCT
T ss_pred CCCCCEEEeeccccccccccccc--ccccccCCCccccCHHHhcCCCCCc
Confidence 99999999999999865432111 1122345899999999998777664
No 98
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=3.1e-30 Score=269.81 Aligned_cols=171 Identities=25% Similarity=0.397 Sum_probs=148.0
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++|||||++++++ .+...
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~~ 89 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDEED 89 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCCE
Confidence 46888999999999999999999999999999996432 34457889999999999999999999995 44557
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+.+|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~----------~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL 156 (384)
T 4fr4_A 90 MFMVVDLLLGGDLRYHLQQNV----------HFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHI 156 (384)
T ss_dssp EEEEECCCTTEEHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEE
Confidence 899999999999999987542 27889999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
+|||+|+.+... ......+||+.|+|||++.+
T Consensus 157 ~DFG~a~~~~~~-----~~~~~~~gt~~Y~aPE~~~~ 188 (384)
T 4fr4_A 157 TDFNIAAMLPRE-----TQITTMAGTKPYMAPEMFSS 188 (384)
T ss_dssp CCCTTCEECCTT-----CCBCCCCSCGGGCCGGGTCC
T ss_pred eccceeeeccCC-----CceeccCCCccccCCeeecc
Confidence 999999866432 12234579999999999974
No 99
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.97 E-value=3.3e-30 Score=268.05 Aligned_cols=177 Identities=24% Similarity=0.314 Sum_probs=151.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccch------hHHHHHHHHHHHHhcCCCCCcceeEeeccCCcC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRG------ALKSFMAECEALRNIRHRNLVKIITACSSSDFQ 513 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 513 (640)
.+.|++.+.||+|+||.||+|+++.+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++ .
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~ 85 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY-----E 85 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE-----E
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE-----E
Confidence 45688999999999999999999999999999999654321 347899999999999999999999995 4
Q ss_pred CCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC
Q 035691 514 GNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM 593 (640)
Q Consensus 514 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~ 593 (640)
+....++||||+++|+|.+++.... .+++..+..++.||+.||.|||+ .+|+||||||+||++++++
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~~----------~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~ 152 (361)
T 2yab_A 86 NRTDVVLILELVSGGELFDFLAQKE----------SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKN 152 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTCS----------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTT
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCC
Confidence 4557899999999999999996532 37899999999999999999999 6999999999999998877
Q ss_pred ----cEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 594 ----IAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 594 ----~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
.+||+|||+++...... .....+||+.|+|||++.+..++.
T Consensus 153 ~~~~~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 197 (361)
T 2yab_A 153 IPIPHIKLIDFGLAHEIEDGV-----EFKNIFGTPEFVAPEIVNYEPLGL 197 (361)
T ss_dssp SSSCCEEECCCSSCEECCTTC-----CCCCCCSCGGGCCHHHHTTCCCCT
T ss_pred CCccCEEEEecCCceEcCCCC-----ccccCCCCccEECchHHcCCCCCc
Confidence 79999999998764321 122356999999999998887764
No 100
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.97 E-value=2.4e-30 Score=266.74 Aligned_cols=189 Identities=27% Similarity=0.407 Sum_probs=151.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc-------
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDF------- 512 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------- 512 (640)
++|++.+.||+|+||.||+|+++.+|+.||||++.... ....+.+.+|++++++++|||||+++++|.....
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45888999999999999999999999999999996543 3455789999999999999999999998754321
Q ss_pred ---------------------------------------------CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCC
Q 035691 513 ---------------------------------------------QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSP 547 (640)
Q Consensus 513 ---------------------------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 547 (640)
..+.+.++||||+++|+|.+++......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~------- 158 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL------- 158 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG-------
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc-------
Confidence 1123479999999999999999765432
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEccccccccCCCccCCC--------ceeecc
Q 035691 548 SILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSN--------QCSSVG 619 (640)
Q Consensus 548 ~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~--------~~~~~~ 619 (640)
...++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......... ......
T Consensus 159 ~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T 3qd2_B 159 EDREHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTG 235 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCS
T ss_pred cchhhHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccc
Confidence 235677789999999999999999 699999999999999999999999999998765432110 112234
Q ss_pred ccccccccCcccCCCCCCCC
Q 035691 620 LKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 620 ~~gt~~y~aPE~~~~~~~s~ 639 (640)
..||+.|+|||++.+..++.
T Consensus 236 ~~gt~~y~aPE~~~~~~~~~ 255 (332)
T 3qd2_B 236 QVGTKLYMSPEQIHGNNYSH 255 (332)
T ss_dssp CC-CGGGSCHHHHHCCCCCT
T ss_pred cCCCcCccChHHhcCCCCcc
Confidence 56999999999998887765
No 101
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.97 E-value=1.5e-30 Score=269.68 Aligned_cols=179 Identities=25% Similarity=0.262 Sum_probs=151.8
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCC
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 514 (640)
..++|++.+.||+|+||+||+|+++.+|+.||||+++.. .....+.+..|..++..+ +||+|+++++++ .+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~ 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE-----EC
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE-----Ec
Confidence 356799999999999999999999989999999999643 234457788999999987 899999999984 44
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ 159 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQVG----------RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGH 159 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSC
T ss_pred CCEEEEEEeCCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCc
Confidence 568999999999999999986432 27889999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+|+..... .......+||+.|+|||++.+..++.
T Consensus 160 vkL~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ 200 (353)
T 2i0e_A 160 IKIADFGMCKENIWD----GVTTKTFCGTPDYIAPEIIAYQPYGK 200 (353)
T ss_dssp EEECCCTTCBCCCCT----TCCBCCCCSCGGGCCHHHHTTCCBST
T ss_pred EEEEeCCcccccccC----CcccccccCCccccChhhhcCCCcCC
Confidence 999999999854221 11233467999999999999887764
No 102
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=3.9e-31 Score=270.21 Aligned_cols=250 Identities=22% Similarity=0.239 Sum_probs=196.4
Q ss_pred hhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhh------cCCCCCCeeeccCCccccc
Q 035691 23 IGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIG------FTLPNIRIPLLAGNQFFGN 96 (640)
Q Consensus 23 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~------~~l~~L~~L~L~~N~l~~~ 96 (640)
++...+|++|++++|.+ .+|..+... |++|+|++|+++. +.+|...+ ..+++|+.|+|++|++++.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~----~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 110 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRA----ARIPSRILFGALRVLGISGLQELTLENLEVTGT 110 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEE----EECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccC----CCcCHHHHHHHHHhcCcCCccEEEccCCcccch
Confidence 45667788888888888 566655544 8888888887754 23444443 2478899999999999888
Q ss_pred CCccC--cCCCCCCEEECcCCccCccCCccccCC-----CCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCC
Q 035691 97 IPHSI--SNASKLEWLDFANNSLTASIPEDLGRL-----RNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVN 169 (640)
Q Consensus 97 ~~~~~--~~l~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N 169 (640)
.|..+ ..+++|++|+|++|++++. |..|..+ ++|++|+|++|+++.+ .++.|.++++|++|++++|
T Consensus 111 ~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~------~~~~~~~l~~L~~L~Ls~N 183 (312)
T 1wwl_A 111 APPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNF------SCEQVRVFPALSTLDLSDN 183 (312)
T ss_dssp CCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCC------CTTTCCCCSSCCEEECCSC
T ss_pred hHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccc------hHHHhccCCCCCEEECCCC
Confidence 88876 8889999999999999876 7777777 8899999999999887 3466778889999999999
Q ss_pred CCCC---cCcCC--CCCCCCCEEEccCCcCcc---cCCcCccCCCCCCEEEccCCCCCCCCC-ccccCCCCccEEeccCc
Q 035691 170 SLRS---IPISV--GYLPKLQVLSLFENNISG---EIPSSLGNFTFLTELNLRGNSIRGSIP-SALGNCHQLQSLDLSKT 240 (640)
Q Consensus 170 ~l~~---ip~~~--~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~n 240 (640)
++.. +|..+ ..+++|++|+|++|.|++ .....+..+++|++|+|++|++++.+| ..+..+++|+.|
T Consensus 184 ~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L----- 258 (312)
T 1wwl_A 184 PELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSL----- 258 (312)
T ss_dssp TTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEE-----
T ss_pred CcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEE-----
Confidence 8765 24444 778999999999999983 222445678899999999999987775 456667778777
Q ss_pred cccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCC
Q 035691 241 IFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHG 308 (640)
Q Consensus 241 ~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 308 (640)
+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|+|++
T Consensus 259 -----------~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 259 -----------NLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -----------ECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred -----------ECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 77788888 5666665 8899999999999865 65 8899999999999999875
No 103
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.6e-31 Score=271.53 Aligned_cols=247 Identities=26% Similarity=0.244 Sum_probs=202.9
Q ss_pred CCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCccc-ccCCccCc-------CCCCCCEEECcCCccC
Q 035691 47 LTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFF-GNIPHSIS-------NASKLEWLDFANNSLT 118 (640)
Q Consensus 47 ~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~-------~l~~L~~L~Ls~N~l~ 118 (640)
+...++|+.|++++|.+ . +|..++.. |+.|+|++|+++ ..+|..+. ++++|++|+|++|+++
T Consensus 39 ~~~~~~L~~l~l~~n~l-~------~p~~~~~~---L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 108 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE-A------DLGQFTDI---IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT 108 (312)
T ss_dssp EEEEEECTTHHHHCCTT-C------CCHHHHHH---HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCB
T ss_pred EccCCCceeEeeccccc-c------cHHHHHHH---HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCccc
Confidence 45667899999998888 4 78777653 899999999994 55666665 7899999999999999
Q ss_pred ccCCccc--cCCCCCCEEEcccCcCCCCCCCcccccccccCC-----CCcceEecCCCCCCCcC-cCCCCCCCCCEEEcc
Q 035691 119 ASIPEDL--GRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNC-----TYLEIVSLNVNSLRSIP-ISVGYLPKLQVLSLF 190 (640)
Q Consensus 119 ~~~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l-----~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~ 190 (640)
+..|..+ ..+++|++|+|++|++++.+ ..+.++ ++|++|++++|+++.++ ..+..+++|++|+|+
T Consensus 109 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-------~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 181 (312)
T 1wwl_A 109 GTAPPPLLEATGPDLNILNLRNVSWATRD-------AWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLS 181 (312)
T ss_dssp SCCCCCSSSCCSCCCSEEEEESCBCSSSS-------SHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECC
T ss_pred chhHHHHHHhcCCCccEEEccCCCCcchh-------HHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECC
Confidence 8888876 89999999999999998862 233444 88999999999998866 678889999999999
Q ss_pred CCcCccc--CCcCc--cCCCCCCEEEccCCCCCCC---CCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCC
Q 035691 191 ENNISGE--IPSSL--GNFTFLTELNLRGNSIRGS---IPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIP 263 (640)
Q Consensus 191 ~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~ 263 (640)
+|++.+. .|..+ ..+++|++|+|++|+|++. ....+..+++|+.| +|++|++++..|
T Consensus 182 ~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L----------------~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 182 DNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGL----------------DLSHNSLRDAAG 245 (312)
T ss_dssp SCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEE----------------ECTTSCCCSSCC
T ss_pred CCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEE----------------ECCCCcCCcccc
Confidence 9988754 23333 7889999999999998832 22344566777777 888888987775
Q ss_pred -ccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccc
Q 035691 264 -LAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQ 331 (640)
Q Consensus 264 -~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 331 (640)
..+..+++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|+++
T Consensus 246 ~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 246 APSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred hhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 56778899999999999999 7787776 8999999999999976 55 999999999999999998
No 104
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=5.9e-31 Score=269.49 Aligned_cols=261 Identities=20% Similarity=0.183 Sum_probs=207.5
Q ss_pred CCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCC
Q 035691 53 LRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLT 132 (640)
Q Consensus 53 L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (640)
++.++++.+.+.. .+..++..+++|+.|+|++|+|++..|..|.++++|++|+|++|++++..+ |..+++|+
T Consensus 12 l~i~~ls~~~l~~------~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~ 83 (317)
T 3o53_A 12 YKIEKVTDSSLKQ------ALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLR 83 (317)
T ss_dssp EEEESCCTTTHHH------HHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCC
T ss_pred eeEeeccccchhh------hHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCC
Confidence 3445666555543 555566667788888888888888888888899999999999999987554 88899999
Q ss_pred EEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEE
Q 035691 133 RLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELN 212 (640)
Q Consensus 133 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 212 (640)
+|+|++|++++++ ..++|++|++++|+++.++... +++|++|++++|.+++..+..|..+++|++|+
T Consensus 84 ~L~Ls~n~l~~l~-----------~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 150 (317)
T 3o53_A 84 TLDLNNNYVQELL-----------VGPSIETLHAANNNISRVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLD 150 (317)
T ss_dssp EEECCSSEEEEEE-----------ECTTCCEEECCSSCCSEEEECC--CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEE
T ss_pred EEECcCCcccccc-----------CCCCcCEEECCCCccCCcCccc--cCCCCEEECCCCCCCCccchhhhccCCCCEEE
Confidence 9999999887642 2378999999999998876533 68899999999999988888999999999999
Q ss_pred ccCCCCCCCCCccc-cCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCcccc
Q 035691 213 LRGNSIRGSIPSAL-GNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLG 291 (640)
Q Consensus 213 L~~N~l~~~~~~~~-~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 291 (640)
|++|++++..+..+ ..+++|+.| +|++|.+++.. ....+++|++|+|++|+|++ +|..|.
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L----------------~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~-l~~~~~ 211 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHL----------------NLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQ 211 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEE----------------ECTTSCCCEEE--CCCCCTTCCEEECCSSCCCE-ECGGGG
T ss_pred CCCCCCCcccHHHHhhccCcCCEE----------------ECCCCcCcccc--cccccccCCEEECCCCcCCc-chhhhc
Confidence 99999998777776 478888888 77777777542 23358999999999999994 566699
Q ss_pred CCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCC
Q 035691 292 SCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNE 357 (640)
Q Consensus 292 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~ 357 (640)
.+++|++|+|++|++++ +|..+..+++|+.|++++|++.|.+....+ ..++.+..+.+.++.
T Consensus 212 ~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~---~~~~~L~~l~l~~~~ 273 (317)
T 3o53_A 212 SAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF---SKNQRVQTVAKQTVK 273 (317)
T ss_dssp GGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHH---HTCHHHHHHHHHHHH
T ss_pred ccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHH---hccccceEEECCCch
Confidence 99999999999999994 678899999999999999999964322222 234455666666443
No 105
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.96 E-value=2.7e-30 Score=261.64 Aligned_cols=180 Identities=25% Similarity=0.419 Sum_probs=148.1
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++ ....
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----EEDD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----ECSS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----eeCC
Confidence 467899999999999999999999999999999985432 33457899999999999999999999995 3455
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~k 151 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHG----------PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLK 151 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEE
Confidence 7899999999999999986432 27889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|+|||+++....... .......||+.|+|||++.+..++.+
T Consensus 152 l~Dfg~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~ 192 (294)
T 4eqm_A 152 IFDFGIAKALSETSL---TQTNHVLGTVQYFSPEQAKGEATDEC 192 (294)
T ss_dssp ECCCSSSTTC----------------CCSSCCHHHHHTCCCCTT
T ss_pred EEeCCCccccccccc---cccCccccCccccCHhHhcCCCCCch
Confidence 999999986643211 12223569999999999988877653
No 106
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.96 E-value=6.8e-30 Score=275.47 Aligned_cols=186 Identities=26% Similarity=0.372 Sum_probs=140.9
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||+||+|+++.+++.||||++... .....+.+.+|+++++.++|||||++++++....+.....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 46799999999999999999999999999999998543 3334578999999999999999999999986655555667
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.|+||||+. |+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~----------~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl 197 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV----------YLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKV 197 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC----------CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEE
T ss_pred EEEEEeccc-cchhhhcccCC----------CCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEee
Confidence 899999985 68998886432 38899999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCC-----------------------ceeeccccccccccCcccCC-CCCCCC
Q 035691 598 GDFGLTRFIPEVISSN-----------------------QCSSVGLKGTVGYAAPEYGM-GSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~-----------------------~~~~~~~~gt~~y~aPE~~~-~~~~s~ 639 (640)
+|||+|+......... .....+.+||++|+|||++. +..++.
T Consensus 198 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 263 (458)
T 3rp9_A 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTE 263 (458)
T ss_dssp CCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCT
T ss_pred cccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCc
Confidence 9999998764221100 01234467899999999864 444554
No 107
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.96 E-value=3.3e-30 Score=267.15 Aligned_cols=174 Identities=26% Similarity=0.314 Sum_probs=150.6
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||.||+|+++.+|+.||||++.... ....+.+.+|+.+++.++||||+++++++ .+...
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 115 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSN 115 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcCCE
Confidence 46888899999999999999999999999999996432 23457889999999999999999999995 44568
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 116 ~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL 182 (350)
T 1rdq_E 116 LYMVMEYVAGGEMFSHLRRIG----------RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQV 182 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEcCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEE
Confidence 899999999999999986432 27888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++..... ....+||+.|+|||++.+..++.
T Consensus 183 ~DFg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~ 217 (350)
T 1rdq_E 183 TDFGFAKRVKGR-------TWTLCGTPEALAPEIILSKGYNK 217 (350)
T ss_dssp CCCTTCEECSSC-------BCCCEECGGGCCHHHHTTCCBCT
T ss_pred cccccceeccCC-------cccccCCccccCHHHhcCCCCCC
Confidence 999999865432 12356999999999999887764
No 108
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=6.5e-30 Score=262.08 Aligned_cols=177 Identities=21% Similarity=0.272 Sum_probs=150.5
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.++||||+++++++. +....+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFE-----SMEELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEE-----ETTEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEe-----cCCEEE
Confidence 467899999999999999999999999999999986443 34467889999999999999999999953 445789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC--CCcEEE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN--DMIAHV 597 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~--~~~~kl 597 (640)
+||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++. ++.+||
T Consensus 78 lv~e~~~g~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl 145 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSA---------FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKI 145 (321)
T ss_dssp EEECCCCCCBHHHHHTSSS---------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEEeCCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEE
Confidence 9999999999999986432 237889999999999999999999 69999999999999987 789999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++.+.... ......||+.|+|||++.+..++.
T Consensus 146 ~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 182 (321)
T 1tki_A 146 IEFGQARQLKPGD-----NFRLLFTAPEYYAPEVHQHDVVST 182 (321)
T ss_dssp CCCTTCEECCTTC-----EEEEEESCGGGSCHHHHTTCEECH
T ss_pred EECCCCeECCCCC-----ccccccCChhhcCcHHhcCCCCCc
Confidence 9999998764321 122346899999999998876553
No 109
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.96 E-value=2.3e-29 Score=255.45 Aligned_cols=176 Identities=27% Similarity=0.382 Sum_probs=144.2
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc--------------------------hhHHHHHHHHHHHH
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR--------------------------GALKSFMAECEALR 493 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 493 (640)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999954321 12356889999999
Q ss_pred hcCCCCCcceeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 035691 494 NIRHRNLVKIITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHC 573 (640)
Q Consensus 494 ~l~H~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~ 573 (640)
+++||||+++++++... .....++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+
T Consensus 92 ~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~lH~-- 155 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVPTL-----------KPLSEDQARFYFQDLIKGIEYLHY-- 155 (298)
T ss_dssp TCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSSCS-----------SCCCHHHHHHHHHHHHHHHHHHHH--
T ss_pred hCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHhhc-----------CCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 99999999999997542 24578999999999999886532 237889999999999999999999
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCC
Q 035691 574 KKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ 636 (640)
Q Consensus 574 ~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 636 (640)
.+|+||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.+..
T Consensus 156 -~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~ 213 (298)
T 2zv2_A 156 -QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD----ALLSNTVGTPAFMAPESLSETR 213 (298)
T ss_dssp -TTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSS----CEECCCCSCGGGCCGGGCCTTC
T ss_pred -CCeeccCCCHHHEEECCCCCEEEecCCCcccccccc----ccccCCcCCccccChhhhccCC
Confidence 699999999999999999999999999998664321 1123356999999999998754
No 110
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.96 E-value=6.2e-30 Score=278.55 Aligned_cols=179 Identities=28% Similarity=0.376 Sum_probs=152.6
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|+..+.||+|+||.||+|+++.+|+.||||++... .......+.+|+++++.++|||||++++++ .+..
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE-----eeCC
Confidence 45688899999999999999999999999999999643 233456788999999999999999999985 4456
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~--------~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vK 326 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQ--------AGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIR 326 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSS--------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeE
Confidence 89999999999999999865432 238899999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+|+.+.... .....+||+.|+|||++.+..++.
T Consensus 327 L~DFGla~~~~~~~-----~~~~~~GT~~Y~APEvl~~~~~~~ 364 (576)
T 2acx_A 327 ISDLGLAVHVPEGQ-----TIKGRVGTVGYMAPEVVKNERYTF 364 (576)
T ss_dssp ECCCTTCEECCTTC-----CEECCCSCGGGCCHHHHTTCEESS
T ss_pred EEecccceecccCc-----cccccCCCccccCHHHHcCCCCCc
Confidence 99999998764321 122357999999999999877664
No 111
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=3.8e-30 Score=264.71 Aligned_cols=199 Identities=38% Similarity=0.591 Sum_probs=162.5
Q ss_pred ccccccCHHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCCCccee
Q 035691 426 DLLLNVSYESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR-GALKSFMAECEALRNIRHRNLVKII 504 (640)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~ 504 (640)
.....++++++....++|+..+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+++++.++||||++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 34567889999999999999999999999999999865 789999999964432 2234689999999999999999999
Q ss_pred EeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCC
Q 035691 505 TACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKP 584 (640)
Q Consensus 505 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp 584 (640)
++|. .....++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+.+.++|+||||||
T Consensus 94 ~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp 162 (326)
T 3uim_A 94 GFCM-----TPTERLLVYPYMANGSVASCLRERPES------QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 162 (326)
T ss_dssp EEEC-----CSSCCEEEEECCTTCBHHHHHHCCSTT------CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSG
T ss_pred EEEe-----cCCceEEEEEeccCCCHHHHHHhcccc------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCch
Confidence 9964 344678999999999999999764432 13488999999999999999999994344999999999
Q ss_pred CCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 585 SNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 585 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.
T Consensus 163 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~ 214 (326)
T 3uim_A 163 ANILLDEEFEAVVGDFGLAKLMDYKDT---HVTTAVRGTIGHIAPEYLSTGKSSE 214 (326)
T ss_dssp GGEEECTTCCEEECCCSSCEECCSSSS---CEECCCCSCGGGCCHHHHHHSEECH
T ss_pred hhEEECCCCCEEeccCccccccCcccc---cccccccCCcCccCHHHhccCCCCc
Confidence 999999999999999999987643221 2223356999999999987766553
No 112
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.96 E-value=1.3e-29 Score=264.26 Aligned_cols=177 Identities=23% Similarity=0.379 Sum_probs=150.1
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|+++.+|+.||+|++.... ....+.+.+|+.+++.++|||||++++++. ....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~~ 102 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EESF 102 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCE
Confidence 356889999999999999999999999999999996443 334567899999999999999999999953 4457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC---Cc
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND---MI 594 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~---~~ 594 (640)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.+ +.
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~ 169 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIVARE----------FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAA 169 (362)
T ss_dssp EEEEECCCCSCBHHHHHTTCS----------CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCC
Confidence 899999999999999886442 27889999999999999999999 699999999999999865 45
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+++...... .....+||+.|+|||++.+..++.
T Consensus 170 ~kl~DfG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 209 (362)
T 2bdw_A 170 VKLADFGLAIEVNDSE-----AWHGFAGTPGYLSPEVLKKDPYSK 209 (362)
T ss_dssp EEECCCTTCBCCTTCC-----SCCCSCSCTTTCCHHHHTTCCCCT
T ss_pred EEEeecCcceEecCCc-----ccccCCCCccccCHHHHccCCCCc
Confidence 9999999998664321 122356999999999999887765
No 113
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.96 E-value=8.7e-30 Score=271.86 Aligned_cols=178 Identities=20% Similarity=0.281 Sum_probs=149.4
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|.++.+|+.||+|++.... ....+.+.+|+++++.++|||||++++++ .....
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~~~~ 84 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEEGH 84 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE-----ECSSE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE-----EECCE
Confidence 456889999999999999999999999999999996543 23456789999999999999999999995 44568
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeC---CCCc
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLD---NDMI 594 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~---~~~~ 594 (640)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++ .++.
T Consensus 85 ~~lv~E~~~gg~L~~~i~~~~----------~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~ 151 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIVARE----------YYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAA 151 (444)
T ss_dssp EEEEECCCBCCBHHHHHHHCS----------CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCC
T ss_pred EEEEEEeCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCc
Confidence 899999999999999886442 27889999999999999999999 6999999999999998 4678
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+|+...... .......||+.|+|||++.+..++.
T Consensus 152 vkL~DFG~a~~~~~~~----~~~~~~~gt~~Y~APE~l~~~~~~~ 192 (444)
T 3soa_A 152 VKLADFGLAIEVEGEQ----QAWFGFAGTPGYLSPEVLRKDPYGK 192 (444)
T ss_dssp EEECCCSSCBCCCTTC----CBCCCSCSCGGGCCHHHHTTCCBCT
T ss_pred EEEccCceeEEecCCC----ceeecccCCcccCCHHHhcCCCCCC
Confidence 9999999998664321 1123457999999999999887765
No 114
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.96 E-value=3.1e-30 Score=269.25 Aligned_cols=177 Identities=32% Similarity=0.386 Sum_probs=141.0
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHH-HHhcCCCCCcceeEeeccCCcCCCc
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEA-LRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
++|++.+.||+|+||+||+|+++.+++.||||++.... ......+..|..+ ++.++|||||++++++ .+.+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~-----~~~~ 112 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTAD 112 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE-----ECSS
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EeCC
Confidence 46888999999999999999999999999999996543 2233556777776 4678999999999995 4456
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 113 ~~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ik 179 (373)
T 2r5t_A 113 KLYFVLDYINGGELFYHLQRER----------CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIV 179 (373)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEE
Confidence 8999999999999999986432 27788899999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++..... .......+||+.|+|||++.+..++.
T Consensus 180 L~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ 218 (373)
T 2r5t_A 180 LTDFGLCKENIEH----NSTTSTFCGTPEYLAPEVLHKQPYDR 218 (373)
T ss_dssp ECCCCBCGGGBCC----CCCCCSBSCCCCCCCHHHHTTCCCCT
T ss_pred EeeCccccccccC----CCccccccCCccccCHHHhCCCCCCc
Confidence 9999999854221 11233467999999999999887764
No 115
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.96 E-value=1e-29 Score=260.91 Aligned_cols=178 Identities=22% Similarity=0.319 Sum_probs=148.1
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc-hhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR-GALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+++.++|||||++++++. .....
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe-----cCCeE
Confidence 4678999999999999999999999999999999964432 23467889999999999999999999954 44578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~ 147 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKIS 147 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT----------BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCcHHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEE
Confidence 99999999999999986443 37889999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
|||+++.+..... .......+||+.|+|||++.+..+
T Consensus 148 Dfg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~ 184 (323)
T 3tki_A 148 DFGLATVFRYNNR--ERLLNKMCGTLPYVAPELLKRREF 184 (323)
T ss_dssp CCTTCEECEETTE--ECCBCSCCSCGGGSCHHHHHCSSB
T ss_pred EeeccceeccCCc--ccccCCCccCcCccCcHHhccCCC
Confidence 9999986532211 111234579999999999987664
No 116
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.96 E-value=1.1e-29 Score=275.82 Aligned_cols=181 Identities=26% Similarity=0.372 Sum_probs=152.9
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|...+.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|++++++++|||||++++++ .....
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~~~ 259 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF-----ETKTD 259 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----eeCCE
Confidence 56888899999999999999999999999999996432 23456789999999999999999999984 44567
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.|+||||++||+|.+++...... ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.+|.+||
T Consensus 260 l~lVmE~~~gg~L~~~l~~~~~~------~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL 330 (543)
T 3c4z_A 260 LCLVMTIMNGGDIRYHIYNVDED------NPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRI 330 (543)
T ss_dssp EEEEECCCTTCBHHHHHHTSSTT------SCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEE
T ss_pred EEEEEEeccCCCHHHHHHHhhcc------cccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEE
Confidence 89999999999999998654321 1348899999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++.+..... .....+||+.|+|||++.+..++.
T Consensus 331 ~DFGla~~~~~~~~----~~~~~~GT~~Y~APE~l~~~~~~~ 368 (543)
T 3c4z_A 331 SDLGLAVELKAGQT----KTKGYAGTPGFMAPELLLGEEYDF 368 (543)
T ss_dssp CCCTTCEECCTTCC----CBCCCCSCTTTSCHHHHTTCCBCT
T ss_pred eecceeeeccCCCc----ccccccCCccccChhhhcCCCCCh
Confidence 99999987643211 123357999999999999887765
No 117
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.96 E-value=1.5e-29 Score=265.39 Aligned_cols=178 Identities=21% Similarity=0.271 Sum_probs=151.4
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.+.|++.+.||+|+||.||+|++..+|+.||+|++..........+.+|+++++.++|||||++++++. .....+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE-----DKYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-----CSSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEE-----eCCEEE
Confidence 356889999999999999999999999999999997665555578999999999999999999999953 445789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC--CCcEEE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN--DMIAHV 597 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~--~~~~kl 597 (640)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++. .+.+||
T Consensus 125 lv~E~~~gg~L~~~l~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL 192 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAED---------YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKI 192 (387)
T ss_dssp EEEECCCCCBHHHHTTCTT---------CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEE
T ss_pred EEEEcCCCCcHHHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEE
Confidence 9999999999999986543 238899999999999999999999 69999999999999974 478999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++...... ......||+.|+|||++.+..++.
T Consensus 193 ~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 229 (387)
T 1kob_A 193 IDFGLATKLNPDE-----IVKVTTATAEFAAPEIVDREPVGF 229 (387)
T ss_dssp CCCTTCEECCTTS-----CEEEECSSGGGCCHHHHTTCCBCH
T ss_pred EecccceecCCCc-----ceeeeccCCCccCchhccCCCCCC
Confidence 9999998764321 112346999999999998877653
No 118
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.96 E-value=2.5e-29 Score=258.43 Aligned_cols=176 Identities=23% Similarity=0.282 Sum_probs=149.8
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc------hhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR------GALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
+.|.+.+.||+|+||.||+|+++.+|+.||+|++..... ...+.+.+|+.+++.++||||+++++++. .
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~ 85 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE-----N 85 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----C
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----e
Confidence 347888999999999999999999999999999964432 13578999999999999999999999953 4
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC-
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM- 593 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~- 593 (640)
....++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~ 152 (326)
T 2y0a_A 86 KTDVILILELVAGGELFDFLAEKE----------SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNV 152 (326)
T ss_dssp SSEEEEEEECCCSCBHHHHHTTSS----------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSS
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcC----------CcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCC
Confidence 457899999999999999986432 37889999999999999999999 6999999999999999887
Q ss_pred ---cEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 594 ---IAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 594 ---~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
.+||+|||+++...... ......||+.|+|||++.+..++.
T Consensus 153 ~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 196 (326)
T 2y0a_A 153 PKPRIKIIDFGLAHKIDFGN-----EFKNIFGTPEFVAPEIVNYEPLGL 196 (326)
T ss_dssp SSCCEEECCCTTCEECCTTS-----CCCCCCSCTTTCCHHHHTTCCCCT
T ss_pred CCCCEEEEECCCCeECCCCC-----ccccccCCcCcCCceeecCCCCCc
Confidence 89999999998764321 112346999999999998887764
No 119
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.96 E-value=7.9e-30 Score=264.94 Aligned_cols=181 Identities=23% Similarity=0.307 Sum_probs=149.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-----chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-----RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
+.|++.+.||+|+||.||+|+++.+|+.||||++.... ....+.+.+|+.+++.++|||||++++++. ..
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~ 98 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS-----SD 98 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eC
Confidence 45888999999999999999999999999999995432 123578999999999999999999999954 44
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc-
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI- 594 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~- 594 (640)
...++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 99 ~~~~lv~e~~~g~~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~ 169 (351)
T 3c0i_A 99 GMLYMVFEFMDGADLCFEIVKRADA------GFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENS 169 (351)
T ss_dssp TEEEEEEECCSSCBHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTT
T ss_pred CEEEEEEeCCCCCCHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCC
Confidence 5789999999999998877532211 1237888999999999999999999 69999999999999986654
Q ss_pred --EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 --AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 --~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+++...... ......+||+.|+|||++.+..++.
T Consensus 170 ~~vkl~Dfg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~ 212 (351)
T 3c0i_A 170 APVKLGGFGVAIQLGESG----LVAGGRVGTPHFMAPEVVKREPYGK 212 (351)
T ss_dssp CCEEECCCTTCEECCTTS----CBCCCCCSCGGGCCHHHHTTCCBCT
T ss_pred CcEEEecCcceeEecCCC----eeecCCcCCcCccCHHHHcCCCCCc
Confidence 9999999998764321 1123356999999999999887764
No 120
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.96 E-value=5.8e-30 Score=263.05 Aligned_cols=181 Identities=25% Similarity=0.433 Sum_probs=146.6
Q ss_pred CCCcccCcccccccceEEEEEECCCC---eEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQ---TVVAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
++|++.+.||+|+||.||+|++..++ ..||||+++.. .....+.+.+|+.+++.++||||+++++++ ....
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~ 123 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-----TRGR 123 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CGGG
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence 46788899999999999999997544 45999999654 334457899999999999999999999995 3445
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++..... .+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+|
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~k 191 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRTHDG---------QFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCK 191 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHTTTT---------CSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEE
T ss_pred ccEEEeeCCCCCcHHHHHHhccc---------CCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEE
Confidence 78999999999999999964432 38899999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++........ ........+|+.|+|||++.+..++.
T Consensus 192 l~Dfg~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~ 233 (325)
T 3kul_A 192 VSDFGLSRVLEDDPDA-AYTTTGGKIPIRWTAPEAIAFRTFSS 233 (325)
T ss_dssp ECCCSSCEECC----C-CEECC---CCGGGSCHHHHHHCEECH
T ss_pred ECCCCcccccccCccc-eeeccCCCCcccccCHhHhcCCCCCc
Confidence 9999999876543221 22223345788999999987766553
No 121
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.96 E-value=2.6e-30 Score=261.95 Aligned_cols=184 Identities=29% Similarity=0.430 Sum_probs=148.4
Q ss_pred cCCCcccCcccccccceEEEEE----ECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGI----LDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
.++|++.+.||+|+||.||+|+ ...+++.||||++........+.+.+|++++++++||||++++++|... +.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---HH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CC
Confidence 3568889999999999999998 4568999999999766666668899999999999999999999997432 23
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
...++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~ 153 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK---------ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRV 153 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG---------GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEE
T ss_pred CceEEEEEeCCCCCHHHHHHhcc---------cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeE
Confidence 35789999999999999986543 237889999999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+|||+++........ ........||+.|+|||++.+..++.
T Consensus 154 kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~ 196 (295)
T 3ugc_A 154 KIGDFGLTKVLPQDKEF-FKVKEPGESPIFWYAPESLTESKFSV 196 (295)
T ss_dssp EECCCCSCC--------------CTTCGGGGCCHHHHHHCCCCH
T ss_pred EEccCcccccccCCcce-eeeccCCCCccceeCcHHhcCCCCCh
Confidence 99999999876432211 11222345788899999998777664
No 122
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.96 E-value=1.9e-29 Score=255.27 Aligned_cols=177 Identities=24% Similarity=0.404 Sum_probs=146.0
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|++.+.||+|+||+||+|+++.+++.||||++.... ....+.+.+|+.++++++||||+++++++. .+...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE-----eCCEE
Confidence 46888999999999999999999999999999996443 334578899999999999999999999954 44578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+++ ++.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~---------~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~ 143 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCN---------GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTT---------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCC-CHHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEe
Confidence 999999986 5555443222 238889999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCC-CCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ-VST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ 639 (640)
|||+++....... ......||+.|+|||++.+.. ++.
T Consensus 144 Dfg~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~ 181 (292)
T 3o0g_A 144 NFGLARAFGIPVR----CYSAEVVTLWYRPPDVLFGAKLYST 181 (292)
T ss_dssp CCTTCEECCSCCS----CCCSCCSCGGGCCHHHHTTCSCCCT
T ss_pred ecccceecCCccc----cccCCccccCCcChHHHcCCCCcCc
Confidence 9999986643211 122346899999999998766 443
No 123
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.96 E-value=1e-29 Score=258.36 Aligned_cols=176 Identities=27% Similarity=0.387 Sum_probs=143.5
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHh--cCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRN--IRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|++ +++.||||++... ....+..|.+++.. ++||||+++++++... ......
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCce
Confidence 45789999999999999999988 6899999998543 23556677777776 7999999999987543 233456
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeeeCCCCCCCeee
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLH--------HHCKKQIVHCDLKPSNVLL 589 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH--------~~~~~~ivHrdlkp~NiLl 589 (640)
.++||||+++|+|.++++.. .+++..++.++.|++.||+||| + .+|+||||||+||++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill 146 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT-----------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILV 146 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC-----------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEE
T ss_pred eEEehhhccCCCHHHHHhhc-----------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEE
Confidence 89999999999999999532 2788999999999999999999 6 799999999999999
Q ss_pred CCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 590 DNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 590 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
+.++.+||+|||+|+.................||+.|+|||++.+.
T Consensus 147 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 192 (301)
T 3q4u_A 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192 (301)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTC
T ss_pred cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCc
Confidence 9999999999999986543222111122334799999999999876
No 124
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.96 E-value=6.4e-30 Score=260.74 Aligned_cols=185 Identities=31% Similarity=0.462 Sum_probs=143.5
Q ss_pred HHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc
Q 035691 435 SLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDF 512 (640)
Q Consensus 435 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 512 (640)
++....++|++.+.||+|+||.||+|++ +|+.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---- 104 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT---- 104 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE----
Confidence 3334456788899999999999999987 58899999986443 334568999999999999999999999953
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeeCCCCCCCeeeC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQ--IVHCDLKPSNVLLD 590 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~--ivHrdlkp~NiLl~ 590 (640)
.....++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+ .+ |+||||||+||+++
T Consensus 105 -~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~ 173 (309)
T 3p86_A 105 -QPPNLSIVTEYLSRGSLYRLLHKSGAR-------EQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVD 173 (309)
T ss_dssp -STTCCEEEEECCTTCBHHHHHHSTTHH-------HHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEEC
T ss_pred -ECCceEEEEecCCCCcHHHHHhhcCCC-------CCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEe
Confidence 344689999999999999999754321 237889999999999999999999 57 99999999999999
Q ss_pred CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 591 NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 591 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
.++.+||+|||+++...... .......||+.|+|||++.+..++.+
T Consensus 174 ~~~~~kL~Dfg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~ 219 (309)
T 3p86_A 174 KKYTVKVCDFGLSRLKASTF----LSSKSAAGTPEWMAPEVLRDEPSNEK 219 (309)
T ss_dssp TTCCEEECCCC---------------------CCTTSCHHHHTTCCCCTT
T ss_pred CCCcEEECCCCCCccccccc----cccccCCCCccccChhhhcCCCCCch
Confidence 99999999999998543221 12233569999999999998887754
No 125
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=265.45 Aligned_cols=185 Identities=17% Similarity=0.183 Sum_probs=148.3
Q ss_pred HHhcCCCcccCcccccccceEEEEE-----ECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC---CCCCcceeEeec
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGI-----LDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR---HRNLVKIITACS 508 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~ 508 (640)
....++|.+.+.||+|+||.||+|+ ...+++.||||++.... ...+..|+++++.++ |+||+++++++.
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 3445678899999999999999994 56688999999985433 356788888888886 999999999964
Q ss_pred cCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCee
Q 035691 509 SSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVL 588 (640)
Q Consensus 509 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiL 588 (640)
..+..++|||||++|+|.+++...... ....+++..++.|+.|++.||+|||+ .+|+||||||+|||
T Consensus 138 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIl 204 (365)
T 3e7e_A 138 -----FQNGSVLVGELYSYGTLLNAINLYKNT-----PEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFI 204 (365)
T ss_dssp -----CSSCEEEEECCCCSCBHHHHHHHHHTS-----TTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEE
T ss_pred -----cCCCcEEEEeccCCCcHHHHHHHhhcc-----cccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEE
Confidence 344779999999999999999642210 01348999999999999999999999 69999999999999
Q ss_pred eCC-----------CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 589 LDN-----------DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 589 l~~-----------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
++. ++.+||+|||+|+.+.... ........+||+.|||||++.+..++.
T Consensus 205 l~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~ 264 (365)
T 3e7e_A 205 LGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFP--KGTIFTAKCETSGFQCVEMLSNKPWNY 264 (365)
T ss_dssp ECGGGTCC------CTTEEECCCTTCEEGGGSC--TTEEECCSSCTTSCCCHHHHTTCCBST
T ss_pred ecccccCccccccccCCEEEeeCchhhhhhccC--CCceeeeecCCCCCCChHHhcCCCCCc
Confidence 998 8999999999997653221 122334467999999999999988775
No 126
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.96 E-value=9e-30 Score=261.87 Aligned_cols=178 Identities=26% Similarity=0.306 Sum_probs=140.0
Q ss_pred cCCCcccCcccccccceEEEEEEC---CCCeEEEEEEeeccc----chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILD---PDQTVVAVKVLFLHQ----RGALKSFMAECEALRNIRHRNLVKIITACSSSDF 512 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 512 (640)
.++|++.+.||+|+||.||+|+.. .+|+.||+|+++... ......+.+|+.+++.++||||+++++++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---- 91 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ---- 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE----
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE----
Confidence 356889999999999999999984 589999999996432 233456889999999999999999999953
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND 592 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~ 592 (640)
.....++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.+
T Consensus 92 -~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 92 -TGGKLYLILEYLSGGELFMQLEREG----------IFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQ 157 (327)
T ss_dssp -CSSCEEEEEECCTTEEHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTT
T ss_pred -cCCEEEEEEeCCCCCcHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCC
Confidence 4457899999999999999986432 27788899999999999999999 699999999999999999
Q ss_pred CcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 593 MIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 593 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+.+||+|||+++...... ......+||+.|+|||++.+..++.
T Consensus 158 ~~~kl~Dfg~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~ 200 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDG----TVTHTFCGTIEYMAPEILMRSGHNR 200 (327)
T ss_dssp SCEEECCCSCC--------------CTTSSCCTTSCHHHHTTSCCCT
T ss_pred CcEEEEeCCcccccccCC----ccccccCCCcCccCHhhCcCCCCCC
Confidence 999999999998543211 1123456999999999998887764
No 127
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.96 E-value=4.1e-29 Score=254.86 Aligned_cols=185 Identities=28% Similarity=0.412 Sum_probs=149.8
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc-----hhHHHHHHHHHHHHhcC---CCCCcceeEeeccC
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR-----GALKSFMAECEALRNIR---HRNLVKIITACSSS 510 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 510 (640)
..++|++.+.||+|+||+||+|++..+++.||||++..... .....+.+|+++++.++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 46789999999999999999999998999999999964321 12356677887777664 99999999998655
Q ss_pred CcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeC
Q 035691 511 DFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLD 590 (640)
Q Consensus 511 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~ 590 (640)
........++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP--------PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVT 154 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT--------TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC--------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEc
Confidence 4333446899999997 599999875443 238899999999999999999999 6999999999999999
Q ss_pred CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 591 NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 591 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
.++.+||+|||+++...... ......||+.|+|||++.+..++.+
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~ 199 (308)
T 3g33_A 155 SGGTVKLADFGLARIYSYQM-----ALTPVVVTLWYRAPEVLLQSTYATP 199 (308)
T ss_dssp TTSCEEECSCSCTTTSTTCC-----CSGGGGCCCSSCCHHHHHTSCCCST
T ss_pred CCCCEEEeeCccccccCCCc-----ccCCccccccccCchHHcCCCCCch
Confidence 99999999999998664321 1234568999999999988887764
No 128
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.96 E-value=3.7e-30 Score=262.95 Aligned_cols=185 Identities=23% Similarity=0.367 Sum_probs=145.2
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|+.++++++||||+++++++.... ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 467899999999999999999999899999999996542 233467899999999999999999999975432 1223
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... .+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~k 156 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG----------PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVK 156 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEE
T ss_pred ccEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEE
Confidence 4589999999999999986432 27888999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++.+...... ........||+.|+|||++.+..++.
T Consensus 157 l~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ 198 (311)
T 3ork_A 157 VMDFGIARAIADSGNS-VTQTAAVIGTAQYLSPEQARGDSVDA 198 (311)
T ss_dssp ECCCSCC-------------------CCTTCCHHHHHTCCCCH
T ss_pred EeeccCcccccccccc-cccccccCcCcccCCHHHhcCCCCCc
Confidence 9999999866432211 11223356899999999998877764
No 129
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.9e-29 Score=259.62 Aligned_cols=174 Identities=26% Similarity=0.369 Sum_probs=147.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++. ...
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~~~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-----TPT 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCC
Confidence 467899999999999999999999999999999996432 223467899999999999999999999954 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+ +|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+|
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~----------~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~k 148 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKK----------RMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVK 148 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEE
T ss_pred EEEEEEECC-CCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEE
Confidence 789999999 689988885432 27889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
|+|||+++....... ....+||+.|+|||++.+..+
T Consensus 149 l~DFG~s~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~ 184 (336)
T 3h4j_B 149 IADFGLSNIMTDGNF-----LKTSCGSPNYAAPEVINGKLY 184 (336)
T ss_dssp ECCSSCTBTTTTSBT-----TCCCTTSTTTSCGGGSCCSGG
T ss_pred EEEeccceeccCCcc-----cccccCCcCcCCHHHHcCCCC
Confidence 999999986643211 123469999999999988765
No 130
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.96 E-value=1.8e-29 Score=263.96 Aligned_cols=190 Identities=23% Similarity=0.381 Sum_probs=150.5
Q ss_pred cCCCcccCcccccccceEEEEEEC-------CCCeEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCCcceeEeeccC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILD-------PDQTVVAVKVLFLHQ-RGALKSFMAECEALRNI-RHRNLVKIITACSSS 510 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 510 (640)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+++++.+ +|||||+++++|.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC--
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc--
Confidence 356888899999999999999863 356789999996543 34457899999999999 8999999999964
Q ss_pred CcCCCceeeEEeeccCCCChhhhcCCCCCCCC------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCC
Q 035691 511 DFQGNDFKALVYEFMHHGSLESWLHPESASDD------LNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKP 584 (640)
Q Consensus 511 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp 584 (640)
.....++||||+++|+|.+++........ .......+++..++.++.|++.||+|||+ .+|+||||||
T Consensus 158 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp 231 (370)
T 2psq_A 158 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 231 (370)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred ---cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccch
Confidence 34468999999999999999975432100 01112357899999999999999999999 6999999999
Q ss_pred CCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 585 SNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 585 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+++.++.+||+|||+++........ .......||+.|+|||++.+..++.
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~ 284 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYY--KKTTNGRLPVKWMAPEALFDRVYTH 284 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTT--CTTTTTTSCGGGCCHHHHHTCCCCH
T ss_pred hhEEECCCCCEEEccccCCcccCcccce--ecccCCCcccceECHhHhcCCCCCc
Confidence 9999999999999999999866432211 1122345789999999998877764
No 131
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.2e-29 Score=256.99 Aligned_cols=175 Identities=26% Similarity=0.368 Sum_probs=147.3
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
++|.+.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++... .....+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC---CCceEE
Confidence 56888999999999999999999999999999996433 34457788999999999999999999987533 234679
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee----CCCCcE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL----DNDMIA 595 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl----~~~~~~ 595 (640)
+||||+++|+|.+++...... ..+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~ 155 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNA-------YGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVY 155 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGT-------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEE
T ss_pred EEEeCCCCCCHHHHHHHhccc-------cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceE
Confidence 999999999999999754321 238899999999999999999999 699999999999999 888899
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
||+|||+++...... ......||+.|+|||++.
T Consensus 156 kL~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~ 188 (319)
T 4euu_A 156 KLTDFGAARELEDDE-----QFVSLYGTEEYLHPDMYE 188 (319)
T ss_dssp EECCCTTCEECCTTC-----CBCCCCSCGGGCCHHHHH
T ss_pred EEccCCCceecCCCC-----ceeecccCCCccCHHHhh
Confidence 999999998764322 112346999999999986
No 132
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.96 E-value=4e-29 Score=268.81 Aligned_cols=180 Identities=23% Similarity=0.273 Sum_probs=145.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc-CCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSDF-QGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~~~ 516 (640)
.++|++.+.||+|+||+||+|++..+|+.||||++... .....+.+.+|+.+++.++|||||++++++..... ....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 56799999999999999999999999999999999643 33445788999999999999999999999754432 2335
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||++++ +.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~------------~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~k 204 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM------------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 204 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS------------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCCC-HHHHHhh------------cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEE
Confidence 689999999875 6555532 27788899999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|+|||+|+...... .....+||++|+|||++.+..++.+
T Consensus 205 l~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~ 243 (464)
T 3ttj_A 205 ILDFGLARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKEN 243 (464)
T ss_dssp ECCCCCC-----CC-----CC----CCCTTCCHHHHTTCCCCTT
T ss_pred EEEEEeeeecCCCc-----ccCCCcccccccCHHHHcCCCCCHH
Confidence 99999998654321 1234579999999999999888754
No 133
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.96 E-value=4.4e-29 Score=266.71 Aligned_cols=186 Identities=25% Similarity=0.316 Sum_probs=149.7
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+++++.++|||||++++++....+.....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 56799999999999999999999999999999999643 3334578999999999999999999999986655444467
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.|+||||++ |+|.+++.... .+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----------~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL 170 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----------FLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKV 170 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecCC-cCHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEE
Confidence 899999987 59999986432 38899999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCC------------------ceeeccccccccccCcccCC-CCCCCC
Q 035691 598 GDFGLTRFIPEVISSN------------------QCSSVGLKGTVGYAAPEYGM-GSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~------------------~~~~~~~~gt~~y~aPE~~~-~~~~s~ 639 (640)
+|||+|+......... .......+||++|+|||++. +..++.
T Consensus 171 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~ 231 (432)
T 3n9x_A 171 CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTK 231 (432)
T ss_dssp CCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCT
T ss_pred ccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCc
Confidence 9999998764321110 01124567999999999864 444543
No 134
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.96 E-value=9.7e-30 Score=266.26 Aligned_cols=181 Identities=25% Similarity=0.457 Sum_probs=138.3
Q ss_pred CCCcccCcccccccceEEEEEEC---CCCeEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 441 GGFSSANLIGTGSFGSVYKGILD---PDQTVVAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
++|++.+.||+|+||.||+|++. .++..||||+++.. .....+.|.+|+.++++++||||++++++|. ...
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~ 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-----KSK 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SSS
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCC
Confidence 46888999999999999999876 46778999999654 3345578999999999999999999999964 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~k 187 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHD---------AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCK 187 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTT---------TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEE
T ss_pred ceEEEEeCCCCCcHHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEE
Confidence 6899999999999999996543 238899999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++........ ........+|+.|+|||++.+..++.
T Consensus 188 l~Dfg~a~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~ 229 (373)
T 2qol_A 188 VSDFGLGRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTS 229 (373)
T ss_dssp ECCC-----------------------CTTSCHHHHHHCCCCH
T ss_pred ECcCccccccccCCcc-ceeccCCCcCCCccChhhhccCCcCc
Confidence 9999999876432211 11122234678899999998777654
No 135
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.96 E-value=1.8e-29 Score=263.03 Aligned_cols=176 Identities=24% Similarity=0.258 Sum_probs=141.7
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
..++|++.+.||+|+||.||+|+++.+++.||||++..... ..+.+.+|+.+++.++|||||++++++. .....
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~~ 91 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVIL-----TPTHL 91 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEe-----eCCEE
Confidence 35679999999999999999999999999999999964332 2367889999999999999999999954 44578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc--EE
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI--AH 596 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~--~k 596 (640)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +|
T Consensus 92 ~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~k 158 (361)
T 3uc3_A 92 AIIMEYASGGELYERICNAG----------RFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLK 158 (361)
T ss_dssp EEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEE
T ss_pred EEEEEeCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEE
Confidence 99999999999999885432 27889999999999999999999 69999999999999987765 99
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
|+|||+++..... ......+||+.|+|||++.+..++
T Consensus 159 l~Dfg~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~ 195 (361)
T 3uc3_A 159 ICDFGYSKSSVLH-----SQPKSTVGTPAYIAPEVLLRQEYD 195 (361)
T ss_dssp ECCCCCC--------------------CTTSCHHHHHCSSCC
T ss_pred EeecCcccccccc-----CCCCCCcCCCCcCChhhhcCCCCC
Confidence 9999999843221 112234699999999999887764
No 136
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.96 E-value=5.5e-30 Score=275.05 Aligned_cols=179 Identities=27% Similarity=0.328 Sum_probs=141.4
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+|+.||||++... .......+.+|+.+++.++||||++++++|. ..+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-----~~~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-----THD 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE-----ETT
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe-----eCC
Confidence 35688999999999999999999999999999999643 2334467889999999999999999999964 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. .+|+||||||+|||++.++.+|
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~k 289 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRER----------VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIK 289 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEE
T ss_pred EEEEEEeeCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEE
Confidence 7899999999999999886432 378899999999999999999962 4899999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+|+..... .......+||+.|+|||++.+..++.
T Consensus 290 l~DFG~a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~ 328 (446)
T 4ejn_A 290 ITDFGLCKEGIKD----GATMKTFCGTPEYLAPEVLEDNDYGR 328 (446)
T ss_dssp ECCCCCCCTTCC---------CCSSSCGGGCCHHHHHTSCCCT
T ss_pred EccCCCceeccCC----CcccccccCCccccCHhhcCCCCCCC
Confidence 9999999854321 11223467999999999998888765
No 137
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.96 E-value=3.4e-29 Score=281.01 Aligned_cols=179 Identities=25% Similarity=0.276 Sum_probs=152.8
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCC
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 514 (640)
..++|++.+.||+|+||+||+|+++.+++.||||+++.. .....+.+..|..++..+ +||+|++++++ +++
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~-----~~~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQT 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE-----CBC
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----EEe
Confidence 456799999999999999999999999999999999643 233457788999999987 79999999998 556
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
.+..|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ 480 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQVG----------RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGH 480 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSC
T ss_pred CCEEEEEEeCcCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCc
Confidence 668999999999999999986532 27889999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+|+..... .......+||+.|+|||++.+..++.
T Consensus 481 ikL~DFGla~~~~~~----~~~~~~~~GT~~Y~APE~l~~~~~~~ 521 (674)
T 3pfq_A 481 IKIADFGMCKENIWD----GVTTKTFCGTPDYIAPEIIAYQPYGK 521 (674)
T ss_dssp EEECCCTTCEECCCT----TCCBCCCCSCSSSCCHHHHTCCCBST
T ss_pred EEEeecceeeccccC----CcccccccCCCcccCHhhhcCCCCCc
Confidence 999999999854321 11233467999999999999888775
No 138
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.96 E-value=2.5e-29 Score=263.03 Aligned_cols=172 Identities=25% Similarity=0.297 Sum_probs=141.7
Q ss_pred cCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeEEeecc
Q 035691 446 ANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKALVYEFM 525 (640)
Q Consensus 446 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~lv~e~~ 525 (640)
.+.||+|+||.||+|++..+|+.||+|+++.......+.+.+|++++++++|||||++++++. .....++||||+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~~lv~E~~ 168 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE-----SKNDIVLVMEYV 168 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSEEEEEEECC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEE-----ECCEEEEEEeCC
Confidence 568999999999999999999999999997665556678999999999999999999999964 345789999999
Q ss_pred CCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee--CCCCcEEEcccccc
Q 035691 526 HHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL--DNDMIAHVGDFGLT 603 (640)
Q Consensus 526 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl--~~~~~~kl~DfGla 603 (640)
++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|||++
T Consensus 169 ~~~~L~~~l~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a 236 (373)
T 2x4f_A 169 DGGELFDRIIDES---------YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLA 236 (373)
T ss_dssp TTCEEHHHHHHTG---------GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred CCCcHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence 9999998885432 237888999999999999999999 699999999999999 67789999999999
Q ss_pred ccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 604 RFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+.+..... .....||+.|+|||++.+..++.
T Consensus 237 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~ 267 (373)
T 2x4f_A 237 RRYKPREK-----LKVNFGTPEFLAPEVVNYDFVSF 267 (373)
T ss_dssp EECCTTCB-----CCCCCSSCTTCCHHHHTTCBCCH
T ss_pred eecCCccc-----cccccCCCcEeChhhccCCCCCc
Confidence 87643211 12346999999999998877653
No 139
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.96 E-value=5.4e-29 Score=267.50 Aligned_cols=175 Identities=29% Similarity=0.414 Sum_probs=150.1
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|.+.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++. ...
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~-----~~~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS-----TPS 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECC
Confidence 357888999999999999999999999999999996432 233567899999999999999999999954 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~~----------~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vk 156 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKNG----------RLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAK 156 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSSS----------SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEE
T ss_pred EEEEEEeCCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeE
Confidence 7899999999999999986432 37889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
|+|||+++...... .....+||+.|+|||++.+..+
T Consensus 157 L~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~ 192 (476)
T 2y94_A 157 IADFGLSNMMSDGE-----FLRTSCGSPNYAAPEVISGRLY 192 (476)
T ss_dssp ECCCSSCEECCTTC-----CBCCCCSCSTTCCHHHHTTCCB
T ss_pred EEeccchhhccccc-----cccccCCCcCeEChhhccCCCC
Confidence 99999998664321 1223569999999999988765
No 140
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.96 E-value=3.8e-29 Score=256.15 Aligned_cols=183 Identities=27% Similarity=0.470 Sum_probs=136.1
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
.++|++.+.||+|+||.||+|+++.+|+.||+|+++... ....+.+.+|++++++++|||||++++++ ..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-----HTENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECCeE
Confidence 467889999999999999999999899999999996543 33446788999999999999999999995 345578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||++ |+|.+++....... .+..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~----~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~ 150 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGN----TPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLG 150 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSS----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEEecC-CCHHHHHHhccccc----cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEEC
Confidence 99999998 59998885432111 11348889999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCC-CCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS-QVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ 639 (640)
|||+++....... ......||+.|+|||++.+. .++.
T Consensus 151 Dfg~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~ 188 (317)
T 2pmi_A 151 DFGLARAFGIPVN----TFSSEVVTLWYRAPDVLMGSRTYST 188 (317)
T ss_dssp CCSSCEETTSCCC----CCCCCCSCCTTCCHHHHTTCCCCCT
T ss_pred cCccceecCCCcc----cCCCCcccccccCchHhhCCCCCCc
Confidence 9999986643211 11234689999999999874 3443
No 141
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.96 E-value=3.1e-29 Score=258.32 Aligned_cols=180 Identities=24% Similarity=0.325 Sum_probs=149.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCcee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
.++|++.+.||+|+||.||+|++..+|+.||||++..... .+.+.+|+++++++ +||||+++++++. .....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~-----~~~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGP-----CGKYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEE-----ETTEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEe-----cCCcc
Confidence 4678999999999999999999988999999999864432 24588999999999 9999999999954 34578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc----
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI---- 594 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~---- 594 (640)
++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~---------~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~ 147 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCD---------RTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQ 147 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTT---------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTT
T ss_pred EEEEEeC-CCCHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCc
Confidence 9999999 999999986432 238899999999999999999999 69999999999999998887
Q ss_pred -EEEccccccccCCCccCCC---ceeeccccccccccCcccCCCCCCCC
Q 035691 595 -AHVGDFGLTRFIPEVISSN---QCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 -~kl~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+++.+....... ........||+.|+|||++.+..++.
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 196 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSR 196 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCH
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCc
Confidence 9999999998764332211 11123467999999999999887764
No 142
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.96 E-value=4.6e-29 Score=263.17 Aligned_cols=185 Identities=18% Similarity=0.172 Sum_probs=151.8
Q ss_pred hcCCCcccCccccc--ccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 439 ATGGFSSANLIGTG--SFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 439 ~~~~~~~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
..++|++.+.||+| +||.||+|+++.+|+.||||++.... ....+.+.+|+.+++.++|||||++++++. .
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~ 97 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----A 97 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----E
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE-----E
Confidence 35678899999999 99999999999999999999996543 334567889999999999999999999954 4
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
....++|||||++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~ 166 (389)
T 3gni_B 98 DNELWVVTSFMAYGSAKDLICTHFM--------DGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGK 166 (389)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHTCT--------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCC
T ss_pred CCEEEEEEEccCCCCHHHHHhhhcc--------cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCC
Confidence 4578999999999999999865432 237889999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccC---CCceeeccccccccccCcccCCC--CCCCC
Q 035691 595 AHVGDFGLTRFIPEVIS---SNQCSSVGLKGTVGYAAPEYGMG--SQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ 639 (640)
+||+|||.+........ .........+||+.|+|||++.+ ..++.
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 216 (389)
T 3gni_B 167 VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA 216 (389)
T ss_dssp EEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCT
T ss_pred EEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCc
Confidence 99999999875422111 01111223468999999999987 45553
No 143
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=7.4e-30 Score=276.44 Aligned_cols=233 Identities=22% Similarity=0.228 Sum_probs=146.3
Q ss_pred CCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCC
Q 035691 52 ELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNL 131 (640)
Q Consensus 52 ~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 131 (640)
+|++|||++|.|+. +++..+..+++|+.|+|++|.|++..| |..+++|++|+|++|.|+++.+ .++|
T Consensus 35 ~L~~L~Ls~n~l~~------~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L 101 (487)
T 3oja_A 35 NVKELDLSGNPLSQ------ISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSI 101 (487)
T ss_dssp GCCEEECCSSCCCC------CCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTC
T ss_pred CccEEEeeCCcCCC------CCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCc
Confidence 44444444444433 333333344445555555555544433 5566666666666666664322 2566
Q ss_pred CEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCc-CcCCCCCCCCCEEEccCCcCcccCCcCcc-CCCCCC
Q 035691 132 TRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSI-PISVGYLPKLQVLSLFENNISGEIPSSLG-NFTFLT 209 (640)
Q Consensus 132 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~ 209 (640)
++|+|++|.|+.++. ..+++|+.|+|++|.++.+ |..+..+++|++|+|++|.|++..|..|. .+++|+
T Consensus 102 ~~L~L~~N~l~~~~~---------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~ 172 (487)
T 3oja_A 102 ETLHAANNNISRVSC---------SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLE 172 (487)
T ss_dssp CEEECCSSCCCCEEE---------CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCC
T ss_pred CEEECcCCcCCCCCc---------cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCccc
Confidence 666666666665421 1235566666666666664 44556667777777777777776666665 677777
Q ss_pred EEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCcc
Q 035691 210 ELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSS 289 (640)
Q Consensus 210 ~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 289 (640)
+|+|++|.|++..+ +..+++|+.| +|++|.|++. |..|..+++|+.|+|++|.|+ .+|..
T Consensus 173 ~L~Ls~N~l~~~~~--~~~l~~L~~L----------------~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~-~lp~~ 232 (487)
T 3oja_A 173 HLNLQYNFIYDVKG--QVVFAKLKTL----------------DLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKA 232 (487)
T ss_dssp EEECTTSCCCEEEC--CCCCTTCCEE----------------ECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTT
T ss_pred EEecCCCccccccc--cccCCCCCEE----------------ECCCCCCCCC-CHhHcCCCCccEEEecCCcCc-ccchh
Confidence 77777777775522 2245666666 6667777753 334777788888888888887 46667
Q ss_pred ccCCCCCCeEEecCCccC-CCCCccCCCCCCCCeEeCc
Q 035691 290 LGSCVGLEYLNLSINSFH-GPIHPGLSSLKSLEGLDLF 326 (640)
Q Consensus 290 ~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~ 326 (640)
+..+++|+.|++++|++. +.+|..+..++.|+.++++
T Consensus 233 l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 233 LRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred hccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 777788888888888877 5566777777778777776
No 144
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.96 E-value=1.6e-29 Score=263.73 Aligned_cols=201 Identities=22% Similarity=0.318 Sum_probs=158.0
Q ss_pred ccCHHHHHHhcCCCcccCcccccccceEEEEE-----ECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCCcc
Q 035691 430 NVSYESLLKATGGFSSANLIGTGSFGSVYKGI-----LDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNI-RHRNLVK 502 (640)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~ 502 (640)
.+...++....++|++.+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|+++++++ +|||||+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 44556666777889999999999999999998 45677899999996543 33456799999999999 7999999
Q ss_pred eeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCC----------------------------------------
Q 035691 503 IITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDD---------------------------------------- 542 (640)
Q Consensus 503 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~---------------------------------------- 542 (640)
++++|... +...++||||+++|+|.+++........
T Consensus 91 ~~~~~~~~----~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (359)
T 3vhe_A 91 LLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG 166 (359)
T ss_dssp EEEEECST----TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred eeeeeecC----CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence 99997432 3457899999999999999975432100
Q ss_pred ----------------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEccccccccC
Q 035691 543 ----------------LNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFI 606 (640)
Q Consensus 543 ----------------~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~ 606 (640)
.......+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 243 (359)
T 3vhe_A 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI 243 (359)
T ss_dssp -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeee
Confidence 00001238899999999999999999999 69999999999999999999999999999866
Q ss_pred CCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 607 PEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 607 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
..... ........||+.|+|||++.+..++.
T Consensus 244 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~ 274 (359)
T 3vhe_A 244 YKDPD--YVRKGDARLPLKWMAPETIFDRVYTI 274 (359)
T ss_dssp TSCTT--CEEC--CEECGGGCCHHHHHHCCCCH
T ss_pred ccccc--chhccccCCCceeEChhhhcCCCCCc
Confidence 43222 12223356899999999988777653
No 145
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.96 E-value=3.3e-29 Score=259.91 Aligned_cols=175 Identities=27% Similarity=0.359 Sum_probs=135.1
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.+.|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++. .....+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~ 124 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFE-----TPTEIS 124 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEE-----CSSEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEe-----cCCeEE
Confidence 456889999999999999999999899999999996433 3356889999999999999999999964 345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC---CCcEE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN---DMIAH 596 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~---~~~~k 596 (640)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++. ++.+|
T Consensus 125 lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~k 191 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEKG----------YYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLK 191 (349)
T ss_dssp EEECCCCSCBHHHHHTTCS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEE
T ss_pred EEEEeCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEE
Confidence 9999999999999986542 27889999999999999999999 69999999999999975 88999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++...... ......||+.|+|||++.+..++.
T Consensus 192 l~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 229 (349)
T 2w4o_A 192 IADFGLSKIVEHQV-----LMKTVCGTPGYCAPEILRGCAYGP 229 (349)
T ss_dssp ECCCC---------------------CGGGSCHHHHTTCCCCT
T ss_pred EccCccccccCccc-----ccccccCCCCccCHHHhcCCCCCc
Confidence 99999998654321 122356999999999999887765
No 146
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.96 E-value=6.1e-29 Score=253.82 Aligned_cols=176 Identities=28% Similarity=0.411 Sum_probs=143.6
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|++++++++||||+++++++ .....
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI-----HSERC 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCSSC
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE-----ccCCE
Confidence 467889999999999999999996 69999999995432 33356789999999999999999999995 34457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++ ++.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 94 ~~lv~e~~~~-~l~~~~~~~~---------~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl 160 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDENK---------TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKL 160 (311)
T ss_dssp EEEEEECCSE-EHHHHHHTCT---------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEcCCCC-CHHHHHHhcc---------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEE
Confidence 8999999985 7887775433 237889999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCC-CCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS-QVS 638 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s 638 (640)
+|||+++....... ......||+.|+|||++.+. .++
T Consensus 161 ~Dfg~a~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~ 198 (311)
T 3niz_A 161 ADFGLARAFGIPVR----SYTHEVVTLWYRAPDVLMGSKKYS 198 (311)
T ss_dssp CCCTTCEETTSCCC-------CCCCCCTTCCHHHHTTCCSCC
T ss_pred ccCcCceecCCCcc----cccCCcccCCcCCHHHhcCCCCCC
Confidence 99999986643211 12234689999999998774 344
No 147
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=2.4e-29 Score=260.92 Aligned_cols=196 Identities=23% Similarity=0.325 Sum_probs=149.2
Q ss_pred HHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc-----cchhHHHHHHHHHHHHhcCCCCCcceeEeecc
Q 035691 435 SLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH-----QRGALKSFMAECEALRNIRHRNLVKIITACSS 509 (640)
Q Consensus 435 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 509 (640)
++....++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++|||||++++++.
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~- 98 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE- 98 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc-
Confidence 3455567799999999999999999999999999999999543 2345578999999999999999999999963
Q ss_pred CCcCCCceeeEEeeccCCCChhhhcCCCCCCCC------------------------------CCCCCCCCCHHHHHHHH
Q 035691 510 SDFQGNDFKALVYEFMHHGSLESWLHPESASDD------------------------------LNYSPSILSFLQRLNIA 559 (640)
Q Consensus 510 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------------------------------~~~~~~~~~~~~~~~i~ 559 (640)
.....++||||+++|+|.+++........ .......+++..+..++
T Consensus 99 ----~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 99 ----DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp ----CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred ----cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 44578999999999999999852110000 00001124567788999
Q ss_pred HHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC--cEEEccccccccCCCccCCCceeeccccccccccCcccCCC--C
Q 035691 560 INVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM--IAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG--S 635 (640)
Q Consensus 560 ~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~ 635 (640)
.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++.+...............||+.|+|||++.+ .
T Consensus 175 ~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 251 (345)
T 3hko_A 175 RQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE 251 (345)
T ss_dssp HHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSS
T ss_pred HHHHHHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCC
Confidence 999999999999 6999999999999998776 89999999998664322222222334569999999999875 4
Q ss_pred CCC
Q 035691 636 QVS 638 (640)
Q Consensus 636 ~~s 638 (640)
.++
T Consensus 252 ~~~ 254 (345)
T 3hko_A 252 SYG 254 (345)
T ss_dssp CCC
T ss_pred CCC
Confidence 444
No 148
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.96 E-value=3.4e-29 Score=261.32 Aligned_cols=191 Identities=25% Similarity=0.304 Sum_probs=159.8
Q ss_pred cccccccCHHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC-----CCC
Q 035691 425 KDLLLNVSYESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR-----HRN 499 (640)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~n 499 (640)
.+....+++++.....++|++.+.||+|+||.||+|++..+++.||||++... ....+.+..|+.+++.++ |||
T Consensus 19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~ 97 (360)
T 3llt_A 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNN 97 (360)
T ss_dssp -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCC
Confidence 34556677777778889999999999999999999999989999999998632 334467788999999986 999
Q ss_pred CcceeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 035691 500 LVKIITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVH 579 (640)
Q Consensus 500 iv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivH 579 (640)
||++++++. ..+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+ .+|+|
T Consensus 98 iv~~~~~~~-----~~~~~~lv~e~~-~~~L~~~~~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH 160 (360)
T 3llt_A 98 IVKYHGKFM-----YYDHMCLIFEPL-GPSLYEIITRNNY--------NGFHIEDIKLYCIEILKALNYLRK---MSLTH 160 (360)
T ss_dssp BCCEEEEEE-----ETTEEEEEECCC-CCBHHHHHHHTTT--------CCCCHHHHHHHHHHHHHHHHHHHH---TTEEC
T ss_pred eecccceee-----ECCeeEEEEcCC-CCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHH---CCeee
Confidence 999999954 345789999999 8999999865432 237889999999999999999999 69999
Q ss_pred CCCCCCCeeeCC-------------------------CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 580 CDLKPSNVLLDN-------------------------DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 580 rdlkp~NiLl~~-------------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
|||||+|||++. ++.+||+|||+|+...... ....||+.|+|||++.+
T Consensus 161 rDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-------~~~~gt~~y~aPE~~~~ 233 (360)
T 3llt_A 161 TDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-------GSIINTRQYRAPEVILN 233 (360)
T ss_dssp SCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-------CSCCSCGGGCCHHHHTT
T ss_pred CCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-------cCccCcccccCcHHHcC
Confidence 999999999975 7899999999998643311 23468999999999999
Q ss_pred CCCCCC
Q 035691 635 SQVSTN 640 (640)
Q Consensus 635 ~~~s~k 640 (640)
..++.+
T Consensus 234 ~~~~~~ 239 (360)
T 3llt_A 234 LGWDVS 239 (360)
T ss_dssp CCCCTT
T ss_pred CCCCCc
Confidence 888764
No 149
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.96 E-value=4.2e-29 Score=256.37 Aligned_cols=180 Identities=30% Similarity=0.396 Sum_probs=145.6
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
..++|++.+.||+|+||.||+|++. ++.||||++..... ....+..|+.++++++|||||++++++.... ......
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~ 97 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDL 97 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEE
T ss_pred chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceE
Confidence 3457889999999999999999885 89999999965433 3345677999999999999999999976532 123457
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------CCCCeeeCCCCCCCeeeCC
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHH-------CKKQIVHCDLKPSNVLLDN 591 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~-------~~~~ivHrdlkp~NiLl~~ 591 (640)
++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +.++|+||||||+||+++.
T Consensus 98 ~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~ 166 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN-----------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN 166 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECT
T ss_pred EEEEecCCCCCHHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECC
Confidence 9999999999999999542 278899999999999999999982 0129999999999999999
Q ss_pred CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 592 DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 592 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
++.+||+|||+|+.+..... ........||+.|+|||++.+.
T Consensus 167 ~~~~kL~DFg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~ 208 (322)
T 3soc_A 167 NLTACIADFGLALKFEAGKS--AGDTHGQVGTRRYMAPEVLEGA 208 (322)
T ss_dssp TCCEEECCCTTCEEECTTSC--CCCCTTCCCCGGGCCHHHHTTC
T ss_pred CCeEEEccCCcccccccccC--ccccccCccCccccCHhhcccc
Confidence 99999999999986643222 1122335699999999999874
No 150
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=8.7e-29 Score=260.94 Aligned_cols=183 Identities=26% Similarity=0.433 Sum_probs=139.8
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcC-CCCCcceeEeeccCCcCCC
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIR-HRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~ 515 (640)
..++|++.+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+.++..+. |||||++++++... ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---~~ 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---ND 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT---TS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC---CC
Confidence 356899999999999999999999999999999998533 3344567889999999997 99999999997532 23
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
...++|||||+ |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~-----------~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~ 148 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN-----------ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHV 148 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCE
T ss_pred CEEEEEecccC-cCHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCE
Confidence 46899999998 5898888532 27788899999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccC-----------------CCceeeccccccccccCcccCCC-CCCCC
Q 035691 596 HVGDFGLTRFIPEVIS-----------------SNQCSSVGLKGTVGYAAPEYGMG-SQVST 639 (640)
Q Consensus 596 kl~DfGla~~~~~~~~-----------------~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ 639 (640)
||+|||+|+.+..... .........+||++|+|||++.+ ..++.
T Consensus 149 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 210 (388)
T 3oz6_A 149 KVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTK 210 (388)
T ss_dssp EECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCT
T ss_pred EecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCC
Confidence 9999999986532110 00112234679999999999987 44543
No 151
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=9.4e-28 Score=265.30 Aligned_cols=248 Identities=25% Similarity=0.323 Sum_probs=208.6
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
++|+.|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|+. +|. .+++
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~------l~~----~l~~ 122 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH------LPA----LPSG 122 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC------CCC----CCTT
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC------CCC----CCCC
Confidence 57999999999999 5565 67999999999999994 555 77999999999999986 766 4789
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcc
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLE 162 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 162 (640)
|+.|+|++|+|+++ |.. +++|++|+|++|+|++ +|. .+++|+.|++++|.|+.++ ..+++|+
T Consensus 123 L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l~----------~~~~~L~ 184 (622)
T 3g06_A 123 LCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTSLP----------MLPSGLQ 184 (622)
T ss_dssp CCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCC----------CCCTTCC
T ss_pred cCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCCCc----------ccCCCCc
Confidence 99999999999974 443 4899999999999996 443 3578999999999999864 2458899
Q ss_pred eEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccc
Q 035691 163 IVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIF 242 (640)
Q Consensus 163 ~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~ 242 (640)
.|++++|.|+.+|.. +++|+.|++++|.|+. +|.. +++|+.|+|++|+|++ +| ..+++|+.|
T Consensus 185 ~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L------- 246 (622)
T 3g06_A 185 ELSVSDNQLASLPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKEL------- 246 (622)
T ss_dssp EEECCSSCCSCCCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEE-------
T ss_pred EEECCCCCCCCCCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEE-------
Confidence 999999999998864 4789999999999994 5543 4889999999999995 44 445677777
Q ss_pred cCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCC
Q 035691 243 LGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLK 318 (640)
Q Consensus 243 ~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 318 (640)
+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++..|..+..++
T Consensus 247 ---------~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 247 ---------MVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ---------ECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ---------ECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 888888884 444 5789999999999999 7788999999999999999999988887766554
No 152
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.96 E-value=5.8e-30 Score=264.51 Aligned_cols=171 Identities=20% Similarity=0.255 Sum_probs=138.3
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--------chhHHHHHHHHHHHHhcC---------CCCCcce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--------RGALKSFMAECEALRNIR---------HRNLVKI 503 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~niv~l 503 (640)
++|++.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|+.++++++ |||||++
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 4577889999999999999998 68999999996542 223478899999999886 8888887
Q ss_pred eEeeccC-------------------------CcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHH
Q 035691 504 ITACSSS-------------------------DFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNI 558 (640)
Q Consensus 504 ~~~~~~~-------------------------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i 558 (640)
.+++... ++......++||||+++|++.+.+.. ..+++..+..+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----------~~~~~~~~~~i 166 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----------KLSSLATAKSI 166 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----------TCCCHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----------cCCCHHHHHHH
Confidence 7764311 01125678999999999977666632 12788999999
Q ss_pred HHHHHHHHHHHh-cCCCCCeeeCCCCCCCeeeCCCC--------------------cEEEccccccccCCCccCCCceee
Q 035691 559 AINVASALEYLH-HHCKKQIVHCDLKPSNVLLDNDM--------------------IAHVGDFGLTRFIPEVISSNQCSS 617 (640)
Q Consensus 559 ~~~i~~al~yLH-~~~~~~ivHrdlkp~NiLl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~ 617 (640)
+.|++.||+||| + .+|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 167 ~~qi~~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------- 235 (336)
T 2vuw_A 167 LHQLTASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------- 235 (336)
T ss_dssp HHHHHHHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--------
T ss_pred HHHHHHHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--------
Confidence 999999999999 7 6999999999999999887 8999999999865321
Q ss_pred ccccccccccCcccCCCCC
Q 035691 618 VGLKGTVGYAAPEYGMGSQ 636 (640)
Q Consensus 618 ~~~~gt~~y~aPE~~~~~~ 636 (640)
..+||+.|||||++.+..
T Consensus 236 -~~~gt~~y~aPE~~~g~~ 253 (336)
T 2vuw_A 236 -IVVFCDVSMDEDLFTGDG 253 (336)
T ss_dssp -EEECCCCTTCSGGGCCCS
T ss_pred -cEEEeecccChhhhcCCC
Confidence 236999999999998764
No 153
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.96 E-value=9.4e-29 Score=253.96 Aligned_cols=169 Identities=26% Similarity=0.297 Sum_probs=126.6
Q ss_pred cCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCCcceeEeeccCCcCCCceeeEEeec
Q 035691 446 ANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR-HRNLVKIITACSSSDFQGNDFKALVYEF 524 (640)
Q Consensus 446 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~~~~lv~e~ 524 (640)
.+.||+|+||.||+|+++.+++.||||++... ....+.+|+.+++.+. ||||+++++++. +....++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~-----~~~~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFH-----DQLHTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSSEEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEE-----cCCEEEEEEEc
Confidence 47899999999999999999999999998543 3356789999999997 999999999953 45578999999
Q ss_pred cCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC---cEEEcccc
Q 035691 525 MHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM---IAHVGDFG 601 (640)
Q Consensus 525 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~---~~kl~DfG 601 (640)
+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||
T Consensus 88 ~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 88 LNGGELFERIKKKK----------HFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp CCSCBHHHHHHHCS----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred cCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 99999999986542 37899999999999999999999 6999999999999997665 89999999
Q ss_pred ccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 602 LTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 602 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+++...... ......+||+.|+|||++.+..++.
T Consensus 155 ~a~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~ 188 (325)
T 3kn6_A 155 FARLKPPDN----QPLKTPCFTLHYAAPELLNQNGYDE 188 (325)
T ss_dssp TCEECCC--------------------------CCCCH
T ss_pred cceecCCCC----CcccccCCCcCccCHHHhcCCCCCC
Confidence 998654321 1122346899999999998887764
No 154
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=4.1e-29 Score=249.55 Aligned_cols=178 Identities=29% Similarity=0.475 Sum_probs=147.9
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|++++++++||||+++++++. .....+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAPIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCceE
Confidence 356788899999999999999987 688899999964433 3467999999999999999999999953 345689
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++..... .+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~D 149 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRG---------LFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSD 149 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTT---------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECC
T ss_pred EEEEeCCCCcHHHHHHhcCc---------ccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecc
Confidence 99999999999999965432 37889999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++...... ........||+.|+|||++.+..++.
T Consensus 150 fg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~ 186 (269)
T 4hcu_A 150 FGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRYSS 186 (269)
T ss_dssp TTGGGGBCCHH---HHSTTSTTCCGGGCCHHHHHHCCCCH
T ss_pred ccccccccccc---cccccCcccccccCCHHHhcCCCCCc
Confidence 99998654321 11122345788999999988776653
No 155
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.95 E-value=8e-30 Score=267.60 Aligned_cols=182 Identities=27% Similarity=0.397 Sum_probs=148.0
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
..++|.+.+.||+|+||.||+|++..+++.||||+++... ....+.|.+|++++++++|||||+++++|. ....
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~ 186 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQP 186 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC-----SSSS
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----cCCC
Confidence 3456788899999999999999999899999999986442 233457889999999999999999999964 3346
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 187 ~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl 254 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRTEG---------ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKI 254 (377)
T ss_dssp CEEEEECCTTCBHHHHHHHHG---------GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEcCCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEE
Confidence 899999999999999986432 237888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++....... ........+++.|+|||++.++.++.
T Consensus 255 ~DfG~s~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~ 294 (377)
T 3cbl_A 255 SDFGMSREEADGVY--AASGGLRQVPVKWTAPEALNYGRYSS 294 (377)
T ss_dssp CCGGGCEECTTSEE--ECCSSCCEEEGGGSCHHHHHHCEEEH
T ss_pred CcCCCceecCCCce--eecCCCCCCCcCcCCHhHhccCCCCc
Confidence 99999986432111 00111123577899999987766553
No 156
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.95 E-value=7.2e-29 Score=251.73 Aligned_cols=182 Identities=27% Similarity=0.426 Sum_probs=145.9
Q ss_pred CCcccCcccccccceEEEEEECCC---CeEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 442 GFSSANLIGTGSFGSVYKGILDPD---QTVVAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.|++.+.||+|+||.||+|++..+ +..||+|.+... .....+.+.+|+.++++++||||++++++|.. .+..
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~ 101 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEGS 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SSSC
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc----CCCc
Confidence 477789999999999999997533 346899988543 33455789999999999999999999998743 3456
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl 169 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNET---------HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKV 169 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTT---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEE
T ss_pred eEEEEeCCCCCCHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEE
Confidence 789999999999999996533 237888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++.................||+.|+|||.+.+..++.
T Consensus 170 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 211 (298)
T 3f66_A 170 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 211 (298)
T ss_dssp CSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCH
T ss_pred CcccccccccccchhccccccCCCCCccccChHHhcCCCCCh
Confidence 999999876543322222334456889999999998776653
No 157
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=6.1e-29 Score=253.86 Aligned_cols=175 Identities=26% Similarity=0.280 Sum_probs=141.4
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|+..+.||+|+||+||+|++..+|+.||||++.... ......+..|+..+.++ +|||||+++++|. .+..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-----~~~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-----EGGI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-----eCCE
Confidence 46889999999999999999999999999999985432 23334566677666665 8999999999964 3457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl 198 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWG---------ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKL 198 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHC---------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEE
T ss_pred EEEEEecc-CCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEE
Confidence 89999999 679988875432 238899999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++...... ......||+.|+|||++.+ .++.
T Consensus 199 ~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~ 234 (311)
T 3p1a_A 199 GDFGLLVELGTAG-----AGEVQEGDPRYMAPELLQG-SYGT 234 (311)
T ss_dssp CCCTTCEECC-----------CCCCCGGGCCGGGGGT-CCST
T ss_pred ccceeeeecccCC-----CCcccCCCccccCHhHhcC-CCCc
Confidence 9999998654321 1223459999999999876 5554
No 158
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.95 E-value=1.6e-28 Score=255.31 Aligned_cols=184 Identities=25% Similarity=0.410 Sum_probs=147.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc---CC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDF---QG 514 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---~~ 514 (640)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ......+.+|+++++.++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 356889999999999999999999999999999985433 2334678899999999999999999999755321 11
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
....++||||+++ ++.+.+..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~---------~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~ 162 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV---------KFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGV 162 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS---------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSC
T ss_pred CceEEEEEeccCC-CHHHHHhhccC---------CCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCC
Confidence 4468999999986 77766654322 37889999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ 636 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 636 (640)
+||+|||+|+.+...............||+.|+|||++.+..
T Consensus 163 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 204 (351)
T 3mi9_A 163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGER 204 (351)
T ss_dssp EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCC
T ss_pred EEEccchhcccccccccccccccCCcccccCccCchhhcCCC
Confidence 999999999876533222222334457899999999997743
No 159
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.95 E-value=3.9e-29 Score=257.87 Aligned_cols=175 Identities=26% Similarity=0.390 Sum_probs=148.4
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc--------hhHHHHHHHHHHHHhcCCCCCcceeEeeccCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR--------GALKSFMAECEALRNIRHRNLVKIITACSSSD 511 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 511 (640)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.++++++||||+++++++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~---- 98 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF---- 98 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE----
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE----
Confidence 4568899999999999999999999999999999964421 1234677899999999999999999995
Q ss_pred cCCCceeeEEeeccCCC-ChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeC
Q 035691 512 FQGNDFKALVYEFMHHG-SLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLD 590 (640)
Q Consensus 512 ~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~ 590 (640)
......++||||+.+| +|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++
T Consensus 99 -~~~~~~~lv~e~~~~g~~l~~~~~~~~----------~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~ 164 (335)
T 3dls_A 99 -ENQGFFQLVMEKHGSGLDLFAFIDRHP----------RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIA 164 (335)
T ss_dssp -ECSSEEEEEEECCTTSCBHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC
T ss_pred -eeCCEEEEEEEeCCCCccHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEc
Confidence 3455789999999877 9999986543 27889999999999999999999 6999999999999999
Q ss_pred CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 591 NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 591 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
.++.+||+|||+++....... .....||+.|+|||++.+..+
T Consensus 165 ~~~~~kL~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~ 206 (335)
T 3dls_A 165 EDFTIKLIDFGSAAYLERGKL-----FYTFCGTIEYCAPEVLMGNPY 206 (335)
T ss_dssp TTSCEEECCCTTCEECCTTCC-----BCEECSCGGGCCHHHHTTCCB
T ss_pred CCCcEEEeecccceECCCCCc-----eeccCCCccccChhhhcCCCC
Confidence 999999999999987643211 123469999999999988776
No 160
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.95 E-value=1.8e-28 Score=246.08 Aligned_cols=176 Identities=24% Similarity=0.288 Sum_probs=150.1
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|++..++..||+|++........+.+.+|++++++++||||+++++++. .....+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 82 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE-----DNTDIY 82 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCeEE
Confidence 345888999999999999999999999999999997665566788999999999999999999999964 445789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee---CCCCcEE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL---DNDMIAH 596 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl---~~~~~~k 596 (640)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+|
T Consensus 83 lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~ 149 (277)
T 3f3z_A 83 LVMELCTGGELFERVVHKR----------VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLK 149 (277)
T ss_dssp EEEECCCSCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEE
T ss_pred EEEeccCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEE
Confidence 9999999999999886432 27889999999999999999999 699999999999999 7889999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++.+.... ......||+.|+|||++.+. ++.
T Consensus 150 l~Dfg~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~-~~~ 186 (277)
T 3f3z_A 150 LIDFGLAARFKPGK-----MMRTKVGTPYYVSPQVLEGL-YGP 186 (277)
T ss_dssp ECCCTTCEECCTTS-----CBCCCCSCTTTCCHHHHTTC-BCT
T ss_pred EEecccceeccCcc-----chhccCCCCCccChHHhccc-CCc
Confidence 99999998654321 12234689999999998654 544
No 161
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.95 E-value=1.3e-28 Score=260.13 Aligned_cols=177 Identities=23% Similarity=0.284 Sum_probs=139.3
Q ss_pred CCCccc-CcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHh-cCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSA-NLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRN-IRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|.+. +.||+|+||+||+|+++.+|+.||||++... ..+.+|+.++.+ .+||||+++++++... +.+..+.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcEE
Confidence 345554 6899999999999999999999999998532 456788888754 5899999999986432 2235578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC---CCcE
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN---DMIA 595 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~---~~~~ 595 (640)
++|||||++|+|.+++..... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++. ++.+
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~ 203 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGD--------QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAIL 203 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCcHHHHHHHhCC--------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccE
Confidence 999999999999999975432 238899999999999999999999 69999999999999997 7899
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+|||+++...... .....+||+.|+|||++.+..++.
T Consensus 204 kl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 242 (400)
T 1nxk_A 204 KLTDFGFAKETTSHN-----SLTTPCYTPYYVAPEVLGPEKYDK 242 (400)
T ss_dssp EECCCTTCEECC----------------CTTCCGGGSCCCCSSS
T ss_pred EEEecccccccCCCC-----ccccCCCCCCccCHhhcCCCCCCC
Confidence 999999998653211 123456899999999998888765
No 162
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.95 E-value=4.1e-29 Score=271.30 Aligned_cols=180 Identities=28% Similarity=0.466 Sum_probs=150.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|+++.++..||||+++... ...+.|.+|+.+|++++|||||+++++|.. ....+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEec-----CCcEE
Confidence 455788899999999999999999889999999996443 345789999999999999999999999643 34689
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+|||||++|+|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 293 lv~E~~~~g~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~D 361 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNR--------QEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVAD 361 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCT--------TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECC
T ss_pred EEEEccCCCCHHHHHHhcCc--------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEee
Confidence 99999999999999964332 237889999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++...... ........+|+.|+|||++.+..++.
T Consensus 362 FG~a~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~ 398 (495)
T 1opk_A 362 FGLSRLMTGDT---YTAHAGAKFPIKWTAPESLAYNKFSI 398 (495)
T ss_dssp TTCEECCTTCC---EECCTTCCCCGGGCCHHHHHHCEECH
T ss_pred cccceeccCCc---eeecCCCcCCcceeCHhHHhcCCCCc
Confidence 99998764321 11222345678999999987766653
No 163
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.95 E-value=1.9e-28 Score=251.46 Aligned_cols=176 Identities=24% Similarity=0.315 Sum_probs=150.0
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccch------hHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRG------ALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
++|++.+.||+|+||.||+|++..+|+.||||++...... ..+.+.+|+.+++.++||||+++++++. .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~ 86 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE-----N 86 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----C
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe-----c
Confidence 4588899999999999999999999999999999644321 3578999999999999999999999953 4
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC-
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM- 593 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~- 593 (640)
....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~ 153 (321)
T 2a2a_A 87 RTDVVLILELVSGGELFDFLAQKE----------SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNI 153 (321)
T ss_dssp SSEEEEEECCCCSCBHHHHHHTCS----------CEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTS
T ss_pred CCEEEEEEEcCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCC
Confidence 457899999999999999996532 37889999999999999999999 6999999999999999888
Q ss_pred ---cEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 594 ---IAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 594 ---~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
.+||+|||+++...... ......||+.|+|||++.+..++.
T Consensus 154 ~~~~~kl~Dfg~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 197 (321)
T 2a2a_A 154 PIPHIKLIDFGLAHEIEDGV-----EFKNIFGTPEFVAPEIVNYEPLGL 197 (321)
T ss_dssp SSCCEEECCCTTCEECCTTC-----CCCCCCSCGGGCCHHHHTTCCCCT
T ss_pred CcCCEEEccCccceecCccc-----cccccCCCCCccCcccccCCCCCC
Confidence 79999999998664321 112346899999999998887764
No 164
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.95 E-value=8.4e-29 Score=247.16 Aligned_cols=178 Identities=30% Similarity=0.422 Sum_probs=148.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|.++ ++..||||++..... ..+.+.+|++++++++||||+++++++. .....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCS-----KEYPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCceE
Confidence 456888999999999999999887 678899999964433 3467899999999999999999999953 445789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++.... ..+++..++.++.|++.|+.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~D 147 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHG---------KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSD 147 (268)
T ss_dssp EEEECCTTCBHHHHHHHHG---------GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECC
T ss_pred EEEEccCCCcHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEcc
Confidence 9999999999999986432 237889999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++...... ........+|+.|+|||++.+..++.
T Consensus 148 fg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~ 184 (268)
T 3sxs_A 148 FGMTRYVLDDQ---YVSSVGTKFPVKWSAPEVFHYFKYSS 184 (268)
T ss_dssp TTCEEECCTTC---EEECCSCCCCGGGCCHHHHHHSEEET
T ss_pred Cccceecchhh---hhcccCCCcCcccCCHHHHhccCCch
Confidence 99998664321 12223345788899999987766654
No 165
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3.4e-29 Score=261.89 Aligned_cols=181 Identities=27% Similarity=0.433 Sum_probs=136.2
Q ss_pred CcccCcccccccceEEEEEECCC---CeEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 443 FSSANLIGTGSFGSVYKGILDPD---QTVVAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 443 ~~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
|++.+.||+|+||.||+|++..+ +..||||.++.. .....+.|.+|+.++++++||||++++++|.. .+...
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----~~~~~ 166 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEGSP 166 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC----CSSCC
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CCCCe
Confidence 55678999999999999987532 246899998543 33456789999999999999999999998733 33467
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~ 234 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVA 234 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTTC---------CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEEC
T ss_pred EEEEECCCCCCHHHHHhhccc---------CCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEe
Confidence 899999999999999965432 36788899999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|||+++.+...............+|+.|+|||++.+..++.
T Consensus 235 DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 275 (373)
T 3c1x_A 235 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 275 (373)
T ss_dssp CC---------------------CCGGGSCHHHHHHCCCCH
T ss_pred eccccccccccccccccccCCCCCcccccChHHhcCCCCCc
Confidence 99999866432221122223345788999999998777654
No 166
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.95 E-value=6.9e-29 Score=250.60 Aligned_cols=175 Identities=26% Similarity=0.406 Sum_probs=142.2
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|++.+.||+|+||.||+|++ .+|+.||+|++.... ....+.+.+|++++++++||||+++++++. .....
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-----TKKRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-----CSSCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc-----cCCeE
Confidence 4688899999999999999998 479999999995443 233477889999999999999999999954 34578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+++ +|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~ 142 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCEG---------GLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIA 142 (288)
T ss_dssp EEEEECCSE-EHHHHHHTSTT---------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCC-CHHHHHHhccc---------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEe
Confidence 999999986 89888864322 37888999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCC-CC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ-VS 638 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s 638 (640)
|||+++...... .......||+.|+|||++.+.. ++
T Consensus 143 Dfg~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~ 179 (288)
T 1ob3_A 143 DFGLARAFGIPV----RKYTHEIVTLWYRAPDVLMGSKKYS 179 (288)
T ss_dssp CTTHHHHHCC-------------CCCTTCCHHHHTTCCSCC
T ss_pred ECccccccCccc----cccccccccccccCchheeCCCCCC
Confidence 999998653221 1122346899999999997643 44
No 167
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.4e-27 Score=239.45 Aligned_cols=210 Identities=23% Similarity=0.240 Sum_probs=110.1
Q ss_pred CCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCc
Q 035691 82 NIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYL 161 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 161 (640)
+|+.|+|++|++++..+..|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++.+ .+..|.++++|
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------~~~~~~~l~~L 102 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL------ALGAFSGLSSL 102 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEE------CTTTTTTCTTC
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCcc------ChhhhcCCccc
Confidence 445555555555555555555555555555555555555555555555555555555555443 12233334444
Q ss_pred ceEecCCCCCCCcCc-CCCCCCCCCEEEccCCcCccc-CCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccC
Q 035691 162 EIVSLNVNSLRSIPI-SVGYLPKLQVLSLFENNISGE-IPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSK 239 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 239 (640)
++|++++|.++.++. .+..+++|++|++++|.+++. +|..|..+++|++|+|++|++++..+..|..+++|+.+++
T Consensus 103 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l-- 180 (276)
T 2z62_A 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL-- 180 (276)
T ss_dssp CEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE--
T ss_pred cEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce--
Confidence 444444444443322 334444455555555544432 2444444444444444444444433333433333332100
Q ss_pred ccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCC
Q 035691 240 TIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKS 319 (640)
Q Consensus 240 n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 319 (640)
.|++++|++++..+..+.. .+|++|+|++|++++..+..|..+++
T Consensus 181 ----------------------------------~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~ 225 (276)
T 2z62_A 181 ----------------------------------SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTS 225 (276)
T ss_dssp ----------------------------------EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCS
T ss_pred ----------------------------------eeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhccccc
Confidence 5666666666444444433 36777777777777666666777777
Q ss_pred CCeEeCcCCcccccc
Q 035691 320 LEGLDLFQNTFQAKS 334 (640)
Q Consensus 320 L~~L~l~~N~l~~~~ 334 (640)
|++|+|++|+|+|.|
T Consensus 226 L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 226 LQKIWLHTNPWDCSC 240 (276)
T ss_dssp CCEEECCSSCBCCCT
T ss_pred ccEEEccCCcccccC
Confidence 777777777777655
No 168
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=246.60 Aligned_cols=179 Identities=25% Similarity=0.392 Sum_probs=132.4
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.++++++||||+++++++. ...
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-----DSN 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE-----CSS
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc-----cCC
Confidence 356888999999999999999998899999999995432 223477899999999999999999999953 445
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~k 152 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKNRV---------KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIK 152 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHTCS---------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCcHHHHHhhcc---------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEE
Confidence 7899999999999999987542 237889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++....... ......||+.|+|||++.+..++.
T Consensus 153 l~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~ 191 (278)
T 3cok_A 153 IADFGLATQLKMPHE----KHYTLCGTPNYISPEIATRSAHGL 191 (278)
T ss_dssp ECCCTTCEECC--------------------------------
T ss_pred EEeecceeeccCCCC----cceeccCCCCcCCcchhcCCCCCc
Confidence 999999986542211 112346899999999998877664
No 169
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.95 E-value=1.4e-28 Score=261.55 Aligned_cols=173 Identities=25% Similarity=0.325 Sum_probs=137.7
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc--------hhHHHHHHHHHHHHhcCCCCCcceeEeecc
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR--------GALKSFMAECEALRNIRHRNLVKIITACSS 509 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 509 (640)
...++|.+.+.||+|+||.||+|+++.+++.||||++..... .....+.+|++++++++|||||++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 345789999999999999999999999999999999964321 11235889999999999999999999853
Q ss_pred CCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee
Q 035691 510 SDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL 589 (640)
Q Consensus 510 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl 589 (640)
.+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||+
T Consensus 211 -----~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll 272 (419)
T 3i6u_A 211 -----AEDYYIVLELMEGGELFDKVVGNK----------RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLL 272 (419)
T ss_dssp -----SSEEEEEEECCTTCBGGGGTSSSC----------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred -----cCceEEEEEcCCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEE
Confidence 234689999999999999886443 37899999999999999999999 699999999999999
Q ss_pred CCC---CcEEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 590 DND---MIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 590 ~~~---~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
+.+ +.+||+|||+|+...... .....+||+.|+|||++.+
T Consensus 273 ~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~ 315 (419)
T 3i6u_A 273 SSQEEDCLIKITDFGHSKILGETS-----LMRTLCGTPTYLAPEVLVS 315 (419)
T ss_dssp SSSSSSCCEEECCSSTTTSCC----------------CTTCCTTTTC-
T ss_pred ecCCCcceEEEeecccceecCCCc-----cccccCCCCCccCceeeec
Confidence 754 459999999998764321 2234569999999999864
No 170
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.3e-29 Score=261.78 Aligned_cols=186 Identities=27% Similarity=0.390 Sum_probs=146.4
Q ss_pred CCCcccCcccccccceEEEEEE-----CCCCeEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGIL-----DPDQTVVAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
++|++.+.||+|+||.||+|++ ..+++.||||+++.. .......+.+|+.++++++|||||++++++. .
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~ 145 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL-----Q 145 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-----c
Confidence 4678889999999999999994 456789999999543 3344467899999999999999999999964 3
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC-
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM- 593 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~- 593 (640)
....++||||+++|+|.+++....... .....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~ 219 (367)
T 3l9p_A 146 SLPRFILLELMAGGDLKSFLRETRPRP---SQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGP 219 (367)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHSCCS---SSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSST
T ss_pred CCCCEEEEEeCCCCCHHHHHHhhcccc---CccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCC
Confidence 446799999999999999996543211 112348899999999999999999999 6999999999999999555
Q ss_pred --cEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 594 --IAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 594 --~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
.+||+|||+|+.+...... .......||+.|+|||++.+..++.
T Consensus 220 ~~~~kL~DFG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~ 265 (367)
T 3l9p_A 220 GRVAKIGDFGMARDIYRAGYY--RKGGCAMLPVKWMPPEAFMEGIFTS 265 (367)
T ss_dssp TCCEEECCCHHHHHHHHHSSC--TTCCGGGSCGGGCCHHHHHHCCCCH
T ss_pred CceEEECCCcccccccccccc--ccCCCcCCcccEECHHHhcCCCCCc
Confidence 5999999999855322111 1122345899999999998777654
No 171
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.95 E-value=5.4e-28 Score=246.38 Aligned_cols=189 Identities=33% Similarity=0.500 Sum_probs=156.7
Q ss_pred cccccCHHHHHHhcCCCccc------CcccccccceEEEEEECCCCeEEEEEEeecc----cchhHHHHHHHHHHHHhcC
Q 035691 427 LLLNVSYESLLKATGGFSSA------NLIGTGSFGSVYKGILDPDQTVVAVKVLFLH----QRGALKSFMAECEALRNIR 496 (640)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~ 496 (640)
....+++.++..+++.|... +.||+|+||.||+|++ +++.||||++... .....+.+.+|+.+++.++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 34578899999999999877 8899999999999987 5889999998532 2334578999999999999
Q ss_pred CCCCcceeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 035691 497 HRNLVKIITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQ 576 (640)
Q Consensus 497 H~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ 576 (640)
||||+++++++. .....++||||+++|+|.+++...... ..+++..++.++.|++.||.|||+ .+
T Consensus 89 h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~---~~ 153 (307)
T 2nru_A 89 HENLVELLGFSS-----DGDDLCLVYVYMPNGSLLDRLSCLDGT-------PPLSWHMRCKIAQGAANGINFLHE---NH 153 (307)
T ss_dssp CTTBCCEEEEEC-----SSSSCEEEEECCTTCBHHHHHHTGGGC-------CCCCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred CCCeEEEEEEEe-----cCCceEEEEEecCCCcHHHHHHhccCC-------CCCCHHHHHHHHHHHHHHHHHHhc---CC
Confidence 999999999963 344689999999999999998643221 237899999999999999999999 69
Q ss_pred eeeCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 577 IVHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 577 ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
|+||||||+||+++.++.+||+|||+++....... ........||+.|+|||++.+
T Consensus 154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~ 209 (307)
T 2nru_A 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ--TVMTSRIVGTTAYMAPEALRG 209 (307)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS--CEECSSCCSCGGGCCHHHHTT
T ss_pred eecCCCCHHHEEEcCCCcEEEeecccccccccccc--cccccccCCCcCcCChHHhcC
Confidence 99999999999999999999999999986543221 112233569999999998865
No 172
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.95 E-value=1.9e-28 Score=246.76 Aligned_cols=178 Identities=22% Similarity=0.370 Sum_probs=150.3
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
..++|++.+.||+|+||.||+|++..+|+.||+|++.... ....+.+.+|+.++++++||||+++++++. ...
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 78 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EES 78 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE-----cCC
Confidence 3578999999999999999999999999999999996443 334577889999999999999999999953 445
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc--
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI-- 594 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~-- 594 (640)
..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.
T Consensus 79 ~~~~v~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~ 145 (284)
T 3kk8_A 79 FHYLVFDLVTGGELFEDIVARE----------FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGA 145 (284)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTC
T ss_pred EEEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCC
Confidence 7899999999999988875432 27888999999999999999999 69999999999999986655
Q ss_pred -EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 -AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 -~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||++....... ......||+.|+|||++.+..++.
T Consensus 146 ~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~ 186 (284)
T 3kk8_A 146 AVKLADFGLAIEVNDSE-----AWHGFAGTPGYLSPEVLKKDPYSK 186 (284)
T ss_dssp CEEECCCTTCEECCSSC-----BCCCSCSCGGGCCHHHHTTCCBCT
T ss_pred cEEEeeceeeEEcccCc-----cccCCCCCcCCcCchhhcCCCCCc
Confidence 9999999998654321 112346899999999999887765
No 173
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.95 E-value=1.3e-28 Score=251.33 Aligned_cols=176 Identities=23% Similarity=0.348 Sum_probs=143.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR--GALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|++++++++||||+++++++. .....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-----RKRRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-----cCCeE
Confidence 578899999999999999999999999999999854332 23467889999999999999999999964 34578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~ 144 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQR----------GVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLC 144 (311)
T ss_dssp EEEEECCSEEHHHHHHHTSS----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCchHHHHHhhhc----------CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEe
Confidence 99999999999998875432 27889999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCC-CCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG-SQVS 638 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s 638 (640)
|||+++....... ......||+.|+|||++.+ ..++
T Consensus 145 Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~ 181 (311)
T 4agu_A 145 DFGFARLLTGPSD----YYDDEVATRWYRSPELLVGDTQYG 181 (311)
T ss_dssp CCTTCEECC----------------GGGCCHHHHHTCSCCC
T ss_pred eCCCchhccCccc----ccCCCcCCccccChHHHhcCCCCC
Confidence 9999986643211 1123468999999999876 3344
No 174
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.95 E-value=1.1e-28 Score=247.91 Aligned_cols=177 Identities=27% Similarity=0.410 Sum_probs=147.7
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|+.+++.++||||+++++++. ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 82 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-----DAT 82 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe-----cCC
Confidence 456888999999999999999999999999999985432 223467899999999999999999999953 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... .+++..+..++.|++.|++|||+ .+|+||||||+||+++.++.+|
T Consensus 83 ~~~lv~e~~~~~~l~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~ 149 (279)
T 3fdn_A 83 RVYLILEYAPLGTVYRELQKLS----------KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELK 149 (279)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEE
Confidence 7899999999999999886432 27888999999999999999998 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|+|||++....... .....||+.|+|||++.+..++.+
T Consensus 150 l~Dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~ 187 (279)
T 3fdn_A 150 IADFGWSVHAPSSR------RTDLCGTLDYLPPEMIEGRMHDEK 187 (279)
T ss_dssp ECSCCEESCC--------------CCCCTTCCHHHHTTCCCCTT
T ss_pred EEeccccccCCccc------ccccCCCCCccCHhHhccCCCCcc
Confidence 99999987543221 123468999999999988877653
No 175
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2e-28 Score=255.73 Aligned_cols=178 Identities=24% Similarity=0.336 Sum_probs=142.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc-CCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSDF-QGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~~~ 516 (640)
.++|+..+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+++++.++||||+++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46788999999999999999999999999999998543 23345678999999999999999999999754421 1223
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----------~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~k 168 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----------KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELK 168 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEE
Confidence 568999999 78999988642 27788999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCC-CCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG-SQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ 639 (640)
|+|||+++..... ....+||++|+|||++.+ ..++.
T Consensus 169 l~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~ 205 (367)
T 1cm8_A 169 ILDFGLARQADSE-------MTGYVVTRWYRAPEVILNWMRYTQ 205 (367)
T ss_dssp ECCCTTCEECCSS-------CCSSCSCGGGCCTHHHHTTTCCCT
T ss_pred EEeeecccccccc-------cCcCcCCCCcCCHHHHhCCCCCCh
Confidence 9999999865321 123568999999999877 45554
No 176
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.95 E-value=9.4e-29 Score=258.32 Aligned_cols=187 Identities=19% Similarity=0.264 Sum_probs=146.3
Q ss_pred hcCCCcccCcccccccceEEEEEECCC-----CeEEEEEEeecccchh-----------HHHHHHHHHHHHhcCCCCCcc
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPD-----QTVVAVKVLFLHQRGA-----------LKSFMAECEALRNIRHRNLVK 502 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~ 502 (640)
..++|++.+.||+|+||.||+|++..+ ++.||||++....... ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 356799999999999999999998754 5789999986443211 123455666777888999999
Q ss_pred eeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 035691 503 IITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDL 582 (640)
Q Consensus 503 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdl 582 (640)
+++++.... .+..+.++||||+ +|+|.+++.... ..+++..+..|+.|++.||+|||+ .+|+||||
T Consensus 113 ~~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~~~---------~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDl 178 (364)
T 3op5_A 113 YWGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEANA---------KRFSRKTVLQLSLRILDILEYIHE---HEYVHGDI 178 (364)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHHTT---------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred EEeeeeecc-CCcceEEEEEeCC-CCCHHHHHHhcc---------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecC
Confidence 999975432 2335689999999 999999986532 238899999999999999999999 69999999
Q ss_pred CCCCeeeC--CCCcEEEccccccccCCCccCCC---ceeeccccccccccCcccCCCCCCCC
Q 035691 583 KPSNVLLD--NDMIAHVGDFGLTRFIPEVISSN---QCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 583 kp~NiLl~--~~~~~kl~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+|||++ .++.+||+|||+|+.+....... ........||+.|+|||++.+..++.
T Consensus 179 kp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 240 (364)
T 3op5_A 179 KASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSR 240 (364)
T ss_dssp CGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCH
T ss_pred CHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCc
Confidence 99999999 88999999999998764332111 11123456999999999999887764
No 177
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=9.4e-27 Score=232.52 Aligned_cols=205 Identities=23% Similarity=0.308 Sum_probs=152.8
Q ss_pred CCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcC-CCCCCCC
Q 035691 106 KLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPIS-VGYLPKL 184 (640)
Q Consensus 106 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~-~~~l~~L 184 (640)
+.+.+++++|+++. +|..+. ++|++|+|++|+++.++ +..|.++++|++|++++|.++.+|.. +..+++|
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~------~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L 87 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLP------SKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL 87 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCC------TTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeC------HHHhcCCCCCCEEECCCCccCeeChhhhcCCCCC
Confidence 34555555555553 333222 34555666666555542 23455556666666666666665554 3557788
Q ss_pred CEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCc
Q 035691 185 QVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPL 264 (640)
Q Consensus 185 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~ 264 (640)
++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+.| +|++|.+++..+.
T Consensus 88 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L----------------~Ls~n~l~~~~~~ 151 (270)
T 2o6q_A 88 ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYL----------------SLGYNELQSLPKG 151 (270)
T ss_dssp CEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEE----------------ECCSSCCCCCCTT
T ss_pred CEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEE----------------ECCCCcCCccCHh
Confidence 888888888887777778888888888888888887777778888888887 7777888877777
Q ss_pred cCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccC
Q 035691 265 AVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQ 335 (640)
Q Consensus 265 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 335 (640)
.|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+|.|.|.
T Consensus 152 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 152 VFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 78889999999999999987777788889999999999999998777888999999999999999988764
No 178
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.95 E-value=4.1e-29 Score=252.34 Aligned_cols=174 Identities=24% Similarity=0.396 Sum_probs=146.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCC-------eEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQ-------TVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDF 512 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 512 (640)
.++|.+.+.||+|+||.||+|++..++ ..||+|++........+.+.+|+.++++++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC--- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC---
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe---
Confidence 356888899999999999999987666 5799999976666667889999999999999999999999643
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND 592 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~ 592 (640)
....++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.+
T Consensus 84 --~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 84 --GDENILVQEFVKFGSLDTYLKKNK---------NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIRE 149 (289)
T ss_dssp --TTCCEEEEECCTTCBHHHHHHHTG---------GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEEC
T ss_pred --CCCCEEEEECCCCCCHHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecC
Confidence 446789999999999999996532 237888999999999999999999 699999999999999888
Q ss_pred Cc--------EEEccccccccCCCccCCCceeeccccccccccCcccCCC-CCCC
Q 035691 593 MI--------AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG-SQVS 638 (640)
Q Consensus 593 ~~--------~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s 638 (640)
+. +||+|||+++..... ....||+.|+|||++.+ ..++
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~ 196 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLPK--------DILQERIPWVPPECIENPKNLN 196 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSCH--------HHHHHTTTTSCHHHHHCGGGCC
T ss_pred CcccccccceeeeccCcccccccCc--------cccCCcCcccCHHHhCCCCCCC
Confidence 76 999999999754321 12347899999999876 4443
No 179
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.95 E-value=9.6e-29 Score=248.83 Aligned_cols=179 Identities=30% Similarity=0.447 Sum_probs=145.7
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
..++|++.+.||+|+||.||+|.+. ++..||||++..... ..+.+.+|++++++++||||+++++++ ......
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 94 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRPI 94 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCCCe
Confidence 3456888899999999999999987 788899999964433 346789999999999999999999995 344578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+++|+|.+++.... ..+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~ 162 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMR---------HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVS 162 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGG---------GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEEC
T ss_pred EEEEeccCCCcHHHHHHHhc---------cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEc
Confidence 99999999999999996532 237889999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|||+++...... ........||+.|+|||++.+..++.
T Consensus 163 Dfg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~ 200 (283)
T 3gen_A 163 DFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSS 200 (283)
T ss_dssp STTGGGGBCCHH---HHSTTSTTSCGGGCCHHHHHHCCCSH
T ss_pred cccccccccccc---cccccCCccCcccCCHHHhccCCCCc
Confidence 999998654321 11122345788999999998776653
No 180
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=2.8e-27 Score=237.24 Aligned_cols=220 Identities=21% Similarity=0.232 Sum_probs=149.0
Q ss_pred EEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEE
Q 035691 32 IIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLD 111 (640)
Q Consensus 32 L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 111 (640)
.+..+..++ .+|..+. ++|++|+|++|+|+. +++..+..+++|+.|+|++|++++..+..|.++++|++|+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRH------LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLI 82 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCE------ECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccc------cCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEE
Confidence 444445554 3444333 356666666666654 5554455566666666666666666666777777777777
Q ss_pred CcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCC--cCcCCCCCCCCCEEEc
Q 035691 112 FANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRS--IPISVGYLPKLQVLSL 189 (640)
Q Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~L 189 (640)
|++|++++..+..|.++++|++|++++|+++.++ ...+.++++|++|++++|.++. +|..+..+++|++|+|
T Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~L 156 (276)
T 2z62_A 83 LTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE------NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDL 156 (276)
T ss_dssp CTTCCCCEECTTTTTTCTTCCEEECTTSCCCCST------TCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEEC
T ss_pred CCCCccCccChhhhcCCccccEEECCCCCccccC------chhcccCCCCCEEECcCCccceecCchhhccCCCCCEEEC
Confidence 7777777766677777777777777777777652 2346677777777777777776 5677788888999999
Q ss_pred cCCcCcccCCcCccCCCCCC----EEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCcc
Q 035691 190 FENNISGEIPSSLGNFTFLT----ELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLA 265 (640)
Q Consensus 190 ~~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~ 265 (640)
++|.+++..+..|..+++|+ .|++++|++++..+..+... +|+.| +|++|++++..+..
T Consensus 157 s~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~-~L~~L----------------~L~~n~l~~~~~~~ 219 (276)
T 2z62_A 157 SSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLKEL----------------ALDTNQLKSVPDGI 219 (276)
T ss_dssp CSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSC-CEEEE----------------ECCSSCCSCCCTTT
T ss_pred CCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCC-cccEE----------------ECCCCceeecCHhH
Confidence 99999887777787777777 88888888886555544432 45555 66666666555555
Q ss_pred CCCCCCCCEEECCCCccc
Q 035691 266 VGNLKSIPHLDLSKNKLS 283 (640)
Q Consensus 266 ~~~l~~L~~L~Ls~N~l~ 283 (640)
|..+++|+.|+|++|+++
T Consensus 220 ~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 220 FDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp TTTCCSCCEEECCSSCBC
T ss_pred hcccccccEEEccCCccc
Confidence 666666666666666665
No 181
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=5.7e-27 Score=236.27 Aligned_cols=205 Identities=26% Similarity=0.260 Sum_probs=125.0
Q ss_pred CCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCC
Q 035691 103 NASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLP 182 (640)
Q Consensus 103 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~ 182 (640)
++++|+++++++|.++. +|..+. ++++.|+|++|+|+.+ .+..|.++++|+.|+|++|.|+.+|.. ..++
T Consensus 8 ~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~------~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~ 77 (290)
T 1p9a_G 8 KVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTF------SLATLMPYTRLTQLNLDRAELTKLQVD-GTLP 77 (290)
T ss_dssp CSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEE------EGGGGTTCTTCCEEECTTSCCCEEECC-SCCT
T ss_pred ccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCcc------CHHHhhcCCCCCEEECCCCccCcccCC-CCCC
Confidence 34444444444444442 222221 3444444444444433 223344444444444444444444332 4455
Q ss_pred CCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCC
Q 035691 183 KLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPI 262 (640)
Q Consensus 183 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~ 262 (640)
+|++|+|++|.|+ .+|..+..+++|++|+|++|+|++..+..|.++++|+.| +|++|+|++..
T Consensus 78 ~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L----------------~L~~N~l~~~~ 140 (290)
T 1p9a_G 78 VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQEL----------------YLKGNELKTLP 140 (290)
T ss_dssp TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEE----------------ECTTSCCCCCC
T ss_pred cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEE----------------ECCCCCCCccC
Confidence 6666666666666 455566666667777777777766666666666666666 66666666666
Q ss_pred CccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccC
Q 035691 263 PLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQ 335 (640)
Q Consensus 263 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 335 (640)
+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|.|.|.
T Consensus 141 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 141 PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred hhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 667777777777777777777665666677778888888888887 456666667788888888888887664
No 182
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.95 E-value=5.2e-29 Score=258.07 Aligned_cols=194 Identities=27% Similarity=0.380 Sum_probs=151.6
Q ss_pred HHHhcCCCcccCcccccccceEEEEEEC-----CCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeecc
Q 035691 436 LLKATGGFSSANLIGTGSFGSVYKGILD-----PDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSS 509 (640)
Q Consensus 436 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 509 (640)
+....++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+.++++++||||++++++|.
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~- 120 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA- 120 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-
Confidence 3445678999999999999999999986 355899999996543 334578999999999999999999999964
Q ss_pred CCcCCCceeeEEeeccCCCChhhhcCCCCCCCC--------------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 035691 510 SDFQGNDFKALVYEFMHHGSLESWLHPESASDD--------------LNYSPSILSFLQRLNIAINVASALEYLHHHCKK 575 (640)
Q Consensus 510 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~ 575 (640)
.....++||||+++|+|.+++........ .......+++..++.++.|++.||.|||+ .
T Consensus 121 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~ 193 (343)
T 1luf_A 121 ----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---R 193 (343)
T ss_dssp ----SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---T
T ss_pred ----cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---C
Confidence 34578999999999999999865321100 00012458899999999999999999999 6
Q ss_pred CeeeCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 576 QIVHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 576 ~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|+||||||+||+++.++.+||+|||+++........ .......||+.|+|||++.+..++.
T Consensus 194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~ 255 (343)
T 1luf_A 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY--KADGNDAIPIRWMPPESIFYNRYTT 255 (343)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB--C----CCBCGGGCCHHHHHHCCCCH
T ss_pred CeecCCCCcceEEECCCCeEEEeecCCCcccccCccc--cccCCCcccceecChhhhccCCcCc
Confidence 9999999999999999999999999999865332111 1122345899999999988776653
No 183
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.95 E-value=6.2e-29 Score=255.74 Aligned_cols=182 Identities=24% Similarity=0.328 Sum_probs=151.9
Q ss_pred CCCcccCcccccccceEEEEE----ECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 441 GGFSSANLIGTGSFGSVYKGI----LDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
++|++.+.||+|+||.||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---SSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---CCc
Confidence 468888999999999999999 4568899999999766666667899999999999999999999987532 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~k 167 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHR---------ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVK 167 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHG---------GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEE
T ss_pred eEEEEEeecCCCCHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEE
Confidence 7899999999999999986432 137899999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
|+|||+++....... .........||+.|+|||++.+..++
T Consensus 168 l~Dfg~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~ 208 (327)
T 3lxl_A 168 IADFGLAKLLPLDKD-YYVVREPGQSPIFWYAPESLSDNIFS 208 (327)
T ss_dssp ECCGGGCEECCTTCS-EEECSSCCCSCGGGSCHHHHHHCEEE
T ss_pred EcccccceecccCCc-cceeeccCCccccccCHHHhccCCCC
Confidence 999999987643221 11122334588999999998776554
No 184
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.95 E-value=2.3e-28 Score=247.44 Aligned_cols=177 Identities=23% Similarity=0.290 Sum_probs=150.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. ..+.
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~ 89 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----DNDF 89 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec-----cCCE
Confidence 46888899999999999999999999999999986442 334577899999999999999999999964 3457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 90 ~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 156 (294)
T 2rku_A 90 VFVVLELCRRRSLLELHKRRK----------ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKI 156 (294)
T ss_dssp EEEEEECCTTCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEE
Confidence 899999999999999885432 27889999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++....... ......||+.|+|||++.+..++.
T Consensus 157 ~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~ 194 (294)
T 2rku_A 157 GDFGLATKVEYDGE----RKKVLCGTPNYIAPEVLSKKGHSF 194 (294)
T ss_dssp CCCTTCEECCSTTC----CBCCCCSCCSSCCHHHHTTSCBCT
T ss_pred EeccCceecccCcc----ccccccCCCCcCCcchhccCCCCc
Confidence 99999986542211 122346899999999998877664
No 185
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.95 E-value=4.6e-29 Score=251.79 Aligned_cols=183 Identities=28% Similarity=0.454 Sum_probs=153.0
Q ss_pred HHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
....++|++.+.||+|+||.||+|++..++..||+|++... ....+.+.+|++++++++||||+++++++. ...
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~ 82 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REP 82 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSS
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCC
Confidence 34456788899999999999999999989999999998643 334578999999999999999999999953 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~ 151 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECNR--------QEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVK 151 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCCT--------TTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEE
T ss_pred CEEEEEEcCCCCcHHHHHHhccc--------CCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEE
Confidence 68999999999999999965332 237889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++...... ........+|+.|+|||++.+..++.
T Consensus 152 l~Dfg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~ 191 (288)
T 3kfa_A 152 VADFGLSRLMTGDT---YTAHAGAKFPIKWTAPESLAYNKFSI 191 (288)
T ss_dssp ECCCCGGGTSCSSS---SEEETTEEECGGGCCHHHHHHCCCCH
T ss_pred EccCccceeccCCc---cccccCCccccCcCChhhhccCCCCc
Confidence 99999998764322 12223345788999999988776653
No 186
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.95 E-value=3.3e-28 Score=243.82 Aligned_cols=173 Identities=27% Similarity=0.385 Sum_probs=127.6
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||.||+|++..+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++. ....
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKDE 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSC
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCe
Confidence 57899999999999999999999999999999985432 233567899999999999999999999964 3457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+ ++++.+++.... .+++..+..++.|++.|+.|||+ .+|+||||||+||++++++.+||
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~~----------~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl 153 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQRD----------KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKI 153 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTSS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEE
T ss_pred EEEEehhc-CCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEE
Confidence 89999999 668888775432 27889999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
+|||+++...... ......||+.|+|||++.+..+
T Consensus 154 ~Dfg~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~ 188 (275)
T 2eue_A 154 ADFGLSNIMTDGN-----FLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp CCSSCC--------------------CTTCCHHHHCC---
T ss_pred eecccceeccCcc-----cccCCCCCcCcCCceeeeCCCC
Confidence 9999998654321 1123458999999999987665
No 187
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.95 E-value=1.5e-28 Score=263.83 Aligned_cols=175 Identities=32% Similarity=0.429 Sum_probs=145.4
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
..++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+.+|++++|||||+++++|.. .....
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~ 262 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGL 262 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEEC----TTSCE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEc----CCCce
Confidence 3456788899999999999999985 7899999996433 45789999999999999999999999743 23468
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++|||||++|+|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~ 331 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGR--------SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVS 331 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCT--------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCCCcHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEe
Confidence 999999999999999975432 236888999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|||+++..... .....+|+.|+|||++.+..++.
T Consensus 332 DfG~a~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~ 365 (450)
T 1k9a_A 332 DFGLTKEASST-------QDTGKLPVKWTAPEALREKKFST 365 (450)
T ss_dssp CCTTCEECC-------------CCCTTTSCHHHHHSSCCCH
T ss_pred eCCCccccccc-------ccCCCCCcceeCHHHhcCCCCCc
Confidence 99999854221 11224788999999998887764
No 188
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.95 E-value=6.1e-28 Score=243.47 Aligned_cols=169 Identities=31% Similarity=0.481 Sum_probs=141.2
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccch-------hHHHHHHHHHHHHhcCCCCCcceeEeeccCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRG-------ALKSFMAECEALRNIRHRNLVKIITACSSSDF 512 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 512 (640)
.++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 46788899999999999999999999999999998543321 126789999999999999999999996332
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeeCCCCCCCeeeC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQ--IVHCDLKPSNVLLD 590 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~--ivHrdlkp~NiLl~ 590 (640)
.++||||+++|+|.+++.... ..+++..++.++.|++.|++|||+ .+ |+||||||+||+++
T Consensus 96 -----~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~ 158 (287)
T 4f0f_A 96 -----PRMVMEFVPCGDLYHRLLDKA---------HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQ 158 (287)
T ss_dssp -----TEEEEECCTTCBHHHHHHCTT---------SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEES
T ss_pred -----CeEEEEecCCCCHHHHHhccc---------CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEe
Confidence 269999999999998886443 238899999999999999999999 57 99999999999998
Q ss_pred CCCc-----EEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 591 NDMI-----AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 591 ~~~~-----~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
.++. +||+|||+++.... ......||+.|+|||++.+
T Consensus 159 ~~~~~~~~~~kl~Dfg~~~~~~~-------~~~~~~g~~~y~aPE~~~~ 200 (287)
T 4f0f_A 159 SLDENAPVCAKVADFGLSQQSVH-------SVSGLLGNFQWMAPETIGA 200 (287)
T ss_dssp CCCTTCSCCEEECCCTTCBCCSS-------CEECCCCCCTTSCGGGSSC
T ss_pred ccCCCCceeEEeCCCCccccccc-------cccccCCCccccCchhhcc
Confidence 8776 99999999985432 1223569999999999843
No 189
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.95 E-value=6.4e-29 Score=255.60 Aligned_cols=179 Identities=24% Similarity=0.413 Sum_probs=139.9
Q ss_pred CCCcccCcccccccceEEEEEECCCCeE----EEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTV----VAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
++|+..+.||+|+||.||+|++..+++. ||+|.+... .....+.+.+|+.++++++||||++++++|...
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 89 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----
Confidence 4588889999999999999998877765 477776432 234457899999999999999999999997532
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
..++|+||+.+|+|.+++..... .+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+
T Consensus 90 -~~~~v~e~~~~g~L~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~ 156 (327)
T 3poz_A 90 -TVQLITQLMPFGCLLDYVREHKD---------NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp -SEEEEEECCTTCBHHHHHHHSTT---------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEE
T ss_pred -CeEEEEEecCCCcHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCE
Confidence 36799999999999999865432 37889999999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+|||+|+....... ........||+.|+|||++.+..++.
T Consensus 157 kl~Dfg~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~ 198 (327)
T 3poz_A 157 KITDFGLAKLLGAEEK--EYHAEGGKVPIKWMALESILHRIYTH 198 (327)
T ss_dssp EECCTTHHHHHTTTCC---------CCCGGGSCHHHHHHCCCCH
T ss_pred EEccCcceeEccCCcc--cccccCCCccccccChHHhccCCCCc
Confidence 9999999987643222 11222345788999999998877764
No 190
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.95 E-value=7e-29 Score=256.45 Aligned_cols=172 Identities=24% Similarity=0.340 Sum_probs=141.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCcee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
.++|++.+.||+|+||.||+|+++.+|+.||||+++..... ..+|++++.++ +||||+++++++ .+....
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~ 91 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVY-----DDGKYV 91 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEE-----EcCCEE
Confidence 45688999999999999999999999999999999654332 35688888887 799999999995 445688
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC----Cc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND----MI 594 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~----~~ 594 (640)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++.+. +.
T Consensus 92 ~lv~E~~~gg~L~~~i~~~~----------~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~ 158 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQK----------FFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPES 158 (342)
T ss_dssp EEEECCCCSCBHHHHHHTCT----------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGG
T ss_pred EEEEeCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCe
Confidence 99999999999999986543 27889999999999999999999 699999999999998433 35
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
+||+|||+++...... ......+||+.|+|||++.+..+
T Consensus 159 ~kl~Dfg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~ 197 (342)
T 2qr7_A 159 IRICDFGFAKQLRAEN----GLLMTPCYTANFVAPEVLERQGY 197 (342)
T ss_dssp EEECCCTTCEECBCTT----CCBCCSSCCSSCCCHHHHHHHHH
T ss_pred EEEEECCCcccCcCCC----CceeccCCCccccCHHHhcCCCC
Confidence 9999999998664321 12234568999999999865433
No 191
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.95 E-value=2.3e-28 Score=252.36 Aligned_cols=177 Identities=23% Similarity=0.296 Sum_probs=150.2
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|.+.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++++. ....
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~ 115 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----DNDF 115 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----cCCe
Confidence 4688889999999999999999999999999998643 2344578899999999999999999999954 3457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++++|.+++.... .+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 116 ~~lv~e~~~~~~L~~~~~~~~----------~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl 182 (335)
T 2owb_A 116 VFVVLELCRRRSLLELHKRRK----------ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKI 182 (335)
T ss_dssp EEEEECCCTTCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEE
Confidence 899999999999999886432 27889999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++....... ......||+.|+|||++.+..++.
T Consensus 183 ~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~ 220 (335)
T 2owb_A 183 GDFGLATKVEYDGE----RKKVLCGTPNYIAPEVLSKKGHSF 220 (335)
T ss_dssp CCCTTCEECCSTTC----CBCCCCSCCSSCCHHHHHTSCBCT
T ss_pred eeccCceecccCcc----cccccCCCccccCHHHhccCCCCc
Confidence 99999986542211 122346899999999998877654
No 192
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.95 E-value=3.1e-28 Score=250.46 Aligned_cols=189 Identities=24% Similarity=0.311 Sum_probs=152.7
Q ss_pred ccCHHHHHHhcCCCccc-CcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhc-CCCCCcceeE
Q 035691 430 NVSYESLLKATGGFSSA-NLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNI-RHRNLVKIIT 505 (640)
Q Consensus 430 ~~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~ 505 (640)
.+.+.......+.|.+. +.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+++.+ +||||+++++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 34444555556667776 88999999999999999999999999996433 33457899999999999 5699999999
Q ss_pred eeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCC
Q 035691 506 ACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPS 585 (640)
Q Consensus 506 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~ 585 (640)
++ ......++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+
T Consensus 97 ~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~ 160 (327)
T 3lm5_A 97 VY-----ENTSEIILILEYAAGGEIFSLCLPELA--------EMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQ 160 (327)
T ss_dssp EE-----ECSSEEEEEEECCTTEEGGGGGSSCC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGG
T ss_pred EE-----EeCCeEEEEEEecCCCcHHHHHHHhcc--------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChH
Confidence 95 345578999999999999999864322 348899999999999999999999 69999999999
Q ss_pred CeeeCC---CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 586 NVLLDN---DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 586 NiLl~~---~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++. ++.+||+|||+++...... ......||+.|+|||++.+..++.
T Consensus 161 NIl~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ 212 (327)
T 3lm5_A 161 NILLSSIYPLGDIKIVDFGMSRKIGHAC-----ELREIMGTPEYLAPEILNYDPITT 212 (327)
T ss_dssp GEEESCBTTBCCEEECCGGGCEEC--------------CCCGGGCCHHHHTTCCCCT
T ss_pred HEEEecCCCCCcEEEeeCccccccCCcc-----ccccccCCcCccCCeeecCCCCCc
Confidence 999987 7899999999998664321 122356999999999999888765
No 193
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3.2e-28 Score=246.83 Aligned_cols=181 Identities=25% Similarity=0.365 Sum_probs=146.2
Q ss_pred CcccCcccccccceEEEEEECCCCe---EEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 443 FSSANLIGTGSFGSVYKGILDPDQT---VVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 443 ~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
|...+.||+|+||.||+|++..++. .||+|++.... ....+.+.+|+.++++++||||+++++++... +...
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~ 98 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----EGLP 98 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----SSCC
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC----CCCc
Confidence 4556889999999999999754443 79999986433 34457899999999999999999999997432 2345
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+.+|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~---------~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~ 166 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQ---------RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVA 166 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTT---------CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecccCCCHHHHHhccc---------cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeC
Confidence 89999999999999996533 237888999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|||+++.................||+.|+|||.+.+..++.
T Consensus 167 Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 207 (298)
T 3pls_A 167 DFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTT 207 (298)
T ss_dssp CTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCH
T ss_pred cCCCcccccCCcccccccCcCCCCCccccChhhhccCCCCh
Confidence 99999866432211122223356899999999998887764
No 194
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.95 E-value=2.6e-28 Score=252.86 Aligned_cols=172 Identities=27% Similarity=0.376 Sum_probs=143.6
Q ss_pred CCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 442 GFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
.|+..+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|++++++++|||||++++++. .....
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~~ 129 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHTA 129 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCeE
Confidence 3778899999999999999998899999999996442 233467899999999999999999999964 34578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+. |++.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 130 ~lv~e~~~-g~l~~~l~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~ 196 (348)
T 1u5q_A 130 WLVMEYCL-GSASDLLEVHK---------KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLG 196 (348)
T ss_dssp EEEEECCS-EEHHHHHHHHT---------SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEEC
T ss_pred EEEEecCC-CCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEe
Confidence 99999997 57877774322 237889999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCC---CCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM---GSQVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ 639 (640)
|||+++..... ....||+.|+|||++. ++.++.
T Consensus 197 DfG~a~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~~ 232 (348)
T 1u5q_A 197 DFGSASIMAPA--------NSFVGTPYWMAPEVILAMDEGQYDG 232 (348)
T ss_dssp CCTTCBSSSSB--------CCCCSCGGGCCHHHHHTTSSCCBCT
T ss_pred eccCceecCCC--------CcccCCcceeCHhhhccccCCCCCc
Confidence 99999865321 1246999999999985 344543
No 195
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=3.7e-28 Score=247.85 Aligned_cols=180 Identities=22% Similarity=0.250 Sum_probs=142.0
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++. .+.
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~~ 107 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE-----IDG 107 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETT
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe-----eCC
Confidence 467999999999999999999999899999999996442 223477899999999999999999999964 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++++|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+|
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~k 174 (309)
T 2h34_A 108 QLYVDMRLINGVDLAAMLRRQG----------PLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAY 174 (309)
T ss_dssp EEEEEEECCCCEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEE
T ss_pred eEEEEEEecCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEE
Confidence 7899999999999999986432 27888999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|+|||+++....... .......||+.|+|||++.+..++.+
T Consensus 175 l~Dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~ 215 (309)
T 2h34_A 175 LVDFGIASATTDEKL---TQLGNTVGTLYYMAPERFSESHATYR 215 (309)
T ss_dssp ECSCCC-------------------CCGGGCCGGGTCC----CC
T ss_pred EecCccCcccccccc---ccccccCCCcCccCHHHHcCCCCCch
Confidence 999999986543211 11223468999999999988877653
No 196
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.95 E-value=2.1e-28 Score=250.42 Aligned_cols=177 Identities=28% Similarity=0.324 Sum_probs=141.2
Q ss_pred cCCCccc-CcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSA-NLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.+.|++. +.||+|+||.||+|++..+++.||||++........+.+.+|++++.++ +||||+++++++. ..+.
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~-----~~~~ 85 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE-----EEDR 85 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe-----eCCE
Confidence 3457774 7899999999999999989999999999766555667899999999985 7999999999954 4457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc---
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI--- 594 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~--- 594 (640)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~ 152 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHKRR----------HFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSP 152 (316)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCS
T ss_pred EEEEEEcCCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCc
Confidence 899999999999999986432 27888999999999999999999 69999999999999998775
Q ss_pred EEEccccccccCCCccCC---CceeeccccccccccCcccCCC
Q 035691 595 AHVGDFGLTRFIPEVISS---NQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
+||+|||+++........ ........+||+.|+|||++.+
T Consensus 153 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 195 (316)
T 2ac3_A 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195 (316)
T ss_dssp EEECCTTCCC-------------------CCSGGGCCHHHHHH
T ss_pred eEEEEccCccccccCCccccccccccccccCCcCccChHHhhc
Confidence 999999999865321110 0111223469999999999864
No 197
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=4.4e-28 Score=250.43 Aligned_cols=185 Identities=26% Similarity=0.342 Sum_probs=142.8
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhc--CCCCCcceeEeeccCCcCCC
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNI--RHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~~~~~~ 515 (640)
...++|++.+.||+|+||.||+|++. ++.||||++..... ..+..|.+++... +||||+++++++.... ...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~ 107 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGT-GSW 107 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GGG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CCC
Confidence 34467999999999999999999985 89999999854332 3455566666554 8999999999975442 222
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeeCCCCCCCeeeC
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHC-----KKQIVHCDLKPSNVLLD 590 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~-----~~~ivHrdlkp~NiLl~ 590 (640)
...++||||+++|+|.++++.. .+++..++.++.|++.||.|||+.+ .++|+||||||+||+++
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~ 176 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST-----------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc-----------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC
Confidence 5789999999999999999532 2788999999999999999999821 12999999999999999
Q ss_pred CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 591 NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 591 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
.++.+||+|||+|+.+...............||+.|+|||++.+...+.
T Consensus 177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 225 (337)
T 3mdy_A 177 KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRN 225 (337)
T ss_dssp TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTT
T ss_pred CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCc
Confidence 9999999999999866433222222223457999999999998766543
No 198
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.95 E-value=3.5e-28 Score=253.98 Aligned_cols=182 Identities=24% Similarity=0.314 Sum_probs=150.8
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
..++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++..........
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3567999999999999999999999999999999996433 334478899999999999999999999987655455567
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++ +|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 105 ~~iv~e~~~~-~L~~~l~~~-----------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl 169 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLKTQ-----------HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKI 169 (364)
T ss_dssp EEEEEECCSE-EHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEcccCc-CHHHHHHhC-----------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEE
Confidence 8999999984 899888532 27888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ 636 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 636 (640)
+|||+++........ .......+||+.|+|||++.+..
T Consensus 170 ~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~ 207 (364)
T 3qyz_A 170 CDFGLARVADPDHDH-TGFLTEYVATRWYRAPEIMLNSK 207 (364)
T ss_dssp CCCTTCEECCGGGCB-CCTTCCCCSCGGGCCHHHHHTBC
T ss_pred EeCcceEecCCCCCc-cccccccccccCCCCCHHhcCCC
Confidence 999999876432211 11123357999999999876543
No 199
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.95 E-value=4.1e-29 Score=256.65 Aligned_cols=197 Identities=26% Similarity=0.418 Sum_probs=138.6
Q ss_pred HHHHHhcCCCcccCcccccccceEEEEEECCCCe---EEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeec
Q 035691 434 ESLLKATGGFSSANLIGTGSFGSVYKGILDPDQT---VVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACS 508 (640)
Q Consensus 434 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 508 (640)
+++....++|++.+.||+|+||.||+|++..++. .||||++... .....+.+.+|++++++++||||+++++++.
T Consensus 16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 95 (323)
T 3qup_A 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95 (323)
T ss_dssp CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence 3344556789999999999999999999876664 8999999644 3445678999999999999999999999975
Q ss_pred cCCcCC-CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCe
Q 035691 509 SSDFQG-NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNV 587 (640)
Q Consensus 509 ~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~Ni 587 (640)
.....+ ....++||||+++|+|.+++....... ....+++..++.++.|++.||+|||+ .+|+||||||+||
T Consensus 96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~----~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NI 168 (323)
T 3qup_A 96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE----NPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNC 168 (323)
T ss_dssp CC-------CEEEEEECCTTCBHHHHHHHHHC-------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred ccccccCCCccEEEEEeccCCcHHHHHHhhhccc----cccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceE
Confidence 443211 122489999999999999985432211 11248899999999999999999999 6999999999999
Q ss_pred eeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 588 LLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 588 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+++.++.+||+|||+++........ .......+|+.|+|||++.+..++.
T Consensus 169 li~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ 218 (323)
T 3qup_A 169 MLAEDMTVCVADFGLSRKIYSGDYY--RQGCASKLPVKWLALESLADNLYTV 218 (323)
T ss_dssp EECTTSCEEECCCCC-------------------CCGGGCCHHHHHHCCCCH
T ss_pred EEcCCCCEEEeeccccccccccccc--cccccccCcccccCchhhcCCCCCC
Confidence 9999999999999999866432211 1122344788999999988776653
No 200
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.95 E-value=2e-28 Score=249.29 Aligned_cols=175 Identities=26% Similarity=0.339 Sum_probs=146.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeE
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKAL 520 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~l 520 (640)
++|.+.+.||+|+||.||+|++..+|+.||+|++........+.+.+|+.+++.++||||+++++++. .....++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 83 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE-----STTHYYL 83 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEEEE
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcc-----cCCEEEE
Confidence 45888999999999999999999899999999997654444567899999999999999999999953 4457899
Q ss_pred EeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee---CCCCcEEE
Q 035691 521 VYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL---DNDMIAHV 597 (640)
Q Consensus 521 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl---~~~~~~kl 597 (640)
||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||++ +.++.+||
T Consensus 84 v~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl 150 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG----------VYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMI 150 (304)
T ss_dssp EECCCCSCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEB
T ss_pred EEEcCCCccHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEE
Confidence 999999999999885432 27888999999999999999999 699999999999999 78899999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++..... ......||+.|+|||++.+..++.
T Consensus 151 ~Dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~ 186 (304)
T 2jam_A 151 TDFGLSKMEQNG------IMSTACGTPGYVAPEVLAQKPYSK 186 (304)
T ss_dssp CSCSTTCCCCCB------TTHHHHSCCCBCCTTTBSSCSCCH
T ss_pred ccCCcceecCCC------ccccccCCCCccChHHhccCCCCc
Confidence 999999754321 112245899999999998887764
No 201
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.95 E-value=8.2e-29 Score=254.60 Aligned_cols=179 Identities=23% Similarity=0.371 Sum_probs=143.4
Q ss_pred CCCcccCcccccccceEEEEEECCCCeE----EEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTV----VAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
++|++.+.||+|+||.||+|++..+++. ||+|.+.... ....+.+.+|+.+++.++||||++++++|. +
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------G 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------B
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------C
Confidence 5688889999999999999999877765 6777764322 233356788999999999999999999863 2
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
...++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~ 154 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQHR---------GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQV 154 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSSG---------GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCE
T ss_pred CccEEEEEeCCCCCHHHHHHHcc---------ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeE
Confidence 35789999999999999986542 136777899999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+|||+++.+...... .......||+.|+|||++.+..++.
T Consensus 155 kl~Dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~ 196 (325)
T 3kex_A 155 QVADFGVADLLPPDDKQ--LLYSEAKTPIKWMALESIHFGKYTH 196 (325)
T ss_dssp EECSCSGGGGSCCCTTC--CC-----CCTTTSCHHHHHHCCCCH
T ss_pred EECCCCcccccCccccc--ccccCCCCcccccChHHhccCCCCh
Confidence 99999999976443221 1223345788999999998777664
No 202
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.95 E-value=3.6e-28 Score=244.81 Aligned_cols=176 Identities=26% Similarity=0.428 Sum_probs=149.8
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++. ....
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 88 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH-----DRKR 88 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE-----cCCE
Confidence 46888999999999999999999999999999995432 233467899999999999999999999954 3457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 155 (284)
T 2vgo_A 89 IYLMLEFAPRGELYKELQKHG----------RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKI 155 (284)
T ss_dssp EEEEECCCTTEEHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEE
T ss_pred EEEEEEeCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEE
Confidence 899999999999999986432 27888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
+|||++....... .....||+.|+|||++.+..++.+
T Consensus 156 ~Dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~ 192 (284)
T 2vgo_A 156 ADFGWSVHAPSLR------RRTMCGTLDYLPPEMIEGKTHDEK 192 (284)
T ss_dssp CCCTTCEECSSSC------BCCCCSCGGGCCHHHHTTCCBCTT
T ss_pred ecccccccCcccc------cccccCCCCcCCHHHhccCCCCcc
Confidence 9999987553211 123468999999999998877653
No 203
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=3.3e-28 Score=257.04 Aligned_cols=177 Identities=25% Similarity=0.365 Sum_probs=147.9
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
.++|.+.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|++++++++||||+++++++.... ....
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---CCee
Confidence 346888999999999999999999999999999996433 334577889999999999999999999975332 3467
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee----CCCCc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL----DNDMI 594 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl----~~~~~ 594 (640)
++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~ 154 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNA-------YGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSV 154 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGT-------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEE
T ss_pred EEEEecCCCCCHHHHHHhhhcc-------cCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCcee
Confidence 9999999999999999754321 238899999999999999999999 699999999999999 78889
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
+||+|||+++...... ......||+.|+|||++.+
T Consensus 155 ~kL~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~ 189 (396)
T 4eut_A 155 YKLTDFGAARELEDDE-----QFVSLYGTEEYLHPDMYER 189 (396)
T ss_dssp EEECCGGGCEECCCGG-----GSSCSSSCCTTCCHHHHHH
T ss_pred EEEecCCCceEccCCC-----ccccccCCccccCHHHhhc
Confidence 9999999998764322 1123469999999998754
No 204
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.95 E-value=6.9e-28 Score=245.13 Aligned_cols=176 Identities=27% Similarity=0.379 Sum_probs=150.7
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
+.|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++. .....+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 96 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLW 96 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEE
Confidence 45888899999999999999999899999999996543 345578999999999999999999999964 345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++++|.+++... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 97 lv~e~~~~~~L~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~D 162 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEPG-----------PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLAD 162 (303)
T ss_dssp EEEECCTTEEHHHHHTTS-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEee
Confidence 999999999999998532 27889999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++...... .......||+.|+|||++.+..++.
T Consensus 163 fg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~ 198 (303)
T 3a7i_A 163 FGVAGQLTDTQ----IKRNTFVGTPFWMAPEVIKQSAYDS 198 (303)
T ss_dssp CTTCEECBTTB----CCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred cccceecCccc----cccCccCCCcCccCHHHHhcCCCCc
Confidence 99998664321 1122356899999999998887764
No 205
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.2e-28 Score=253.61 Aligned_cols=177 Identities=28% Similarity=0.444 Sum_probs=140.1
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccch-----hHHHHHHHHHHHHhcCCCCCcceeEeeccCCc
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRG-----ALKSFMAECEALRNIRHRNLVKIITACSSSDF 512 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 512 (640)
...++|++.+.||+|+||.||+|++..+|+.||||++...... ..+.+.+|+++++.++||||+++++++.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---- 82 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG---- 82 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe----
Confidence 3457799999999999999999999989999999999643221 1246889999999999999999999953
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND 592 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~ 592 (640)
.....++||||+++ +|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 83 -~~~~~~lv~e~~~~-~l~~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~ 148 (346)
T 1ua2_A 83 -HKSNISLVFDFMET-DLEVIIKDNSL---------VLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDEN 148 (346)
T ss_dssp -CTTCCEEEEECCSE-EHHHHHTTCCS---------SCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTT
T ss_pred -eCCceEEEEEcCCC-CHHHHHHhcCc---------CCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCC
Confidence 44578999999986 88888865432 26677889999999999999999 699999999999999999
Q ss_pred CcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCC
Q 035691 593 MIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ 636 (640)
Q Consensus 593 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 636 (640)
+.+||+|||+++.+..... ......||+.|+|||++.+..
T Consensus 149 ~~~kl~Dfg~a~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~ 188 (346)
T 1ua2_A 149 GVLKLADFGLAKSFGSPNR----AYTHQVVTRWYRAPELLFGAR 188 (346)
T ss_dssp CCEEECCCGGGSTTTSCCC----CCCCSCCCCTTCCHHHHTTCS
T ss_pred CCEEEEecccceeccCCcc----cCCcccccccccCchHhhCCC
Confidence 9999999999987643221 122346899999999997654
No 206
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.95 E-value=1.4e-28 Score=251.50 Aligned_cols=199 Identities=25% Similarity=0.399 Sum_probs=145.4
Q ss_pred CHHHHHHhcCCCcccCcccccccceEEEEEECC---CCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEe
Q 035691 432 SYESLLKATGGFSSANLIGTGSFGSVYKGILDP---DQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITA 506 (640)
Q Consensus 432 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~ 506 (640)
.++++....++|.+.+.||+|+||.||+|++.. ++..||||++.... ....+.+.+|+.++++++||||++++++
T Consensus 25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 104 (313)
T 3brb_A 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV 104 (313)
T ss_dssp CTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred hHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence 344555566778889999999999999998764 45689999996442 3345779999999999999999999999
Q ss_pred eccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCC
Q 035691 507 CSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSN 586 (640)
Q Consensus 507 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~N 586 (640)
+...........++||||+++|+|.+++....... ....+++..++.++.|++.||.|||+ .+|+||||||+|
T Consensus 105 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~N 177 (313)
T 3brb_A 105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET----GPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARN 177 (313)
T ss_dssp EEC-------CEEEEEECCTTCBHHHHHHHTTBTT----SCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGG
T ss_pred EeeccccCCcccEEEEecccCCCHHHHHHHhhhhc----CCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcce
Confidence 86554333345699999999999999984332111 11348899999999999999999999 699999999999
Q ss_pred eeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 587 VLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 587 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+++.++.+||+|||+++....... ........+++.|+|||++.+..++.
T Consensus 178 Ili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~ 228 (313)
T 3brb_A 178 CMLRDDMTVCVADFGLSKKIYSGDY--YRQGRIAKMPVKWIAIESLADRVYTS 228 (313)
T ss_dssp EEECTTSCEEECSCSCC------------------CCGGGSCHHHHHSSCCCH
T ss_pred EEEcCCCcEEEeecCcceecccccc--cCcccccCCCccccCchhhcCCCccc
Confidence 9999999999999999986543211 11122345788999999998877654
No 207
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.95 E-value=1.4e-28 Score=250.14 Aligned_cols=181 Identities=30% Similarity=0.407 Sum_probs=146.3
Q ss_pred CCcccCcccccccceEEEEE----ECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 442 GFSSANLIGTGSFGSVYKGI----LDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.|+..+.||+|+||.||+|+ ...+++.||||++.... ....+.+.+|+++++.++||||+++++++.... ..
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~ 98 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---GN 98 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------C
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---Cc
Confidence 47788999999999999999 45689999999996443 334578999999999999999999999975432 34
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~k 166 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK---------NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVK 166 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT---------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEE
T ss_pred eEEEEEEeCCCCcHHHHHHhcc---------ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEE
Confidence 6789999999999999985432 237889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
|+|||+++....... .........||..|+|||++.+..++
T Consensus 167 l~Dfg~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~ 207 (302)
T 4e5w_A 167 IGDFGLTKAIETDKE-YYTVKDDRDSPVFWYAPECLMQSKFY 207 (302)
T ss_dssp ECCCTTCEECCTTCC-EEECCCCTTCCGGGCCHHHHHHCEEE
T ss_pred ECcccccccccCCCc-ceeccCCCCCCccccCCeeecCCCCC
Confidence 999999987643321 11222335688999999998776654
No 208
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.95 E-value=1.1e-28 Score=253.95 Aligned_cols=180 Identities=26% Similarity=0.435 Sum_probs=139.4
Q ss_pred HHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR--GALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
....++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++. .
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~ 104 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH-----H 104 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE-----E
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe-----c
Confidence 3445679999999999999999999999999999999964432 23457889999999999999999999954 4
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee-----
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL----- 589 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl----- 589 (640)
....++||||+++ +|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++
T Consensus 105 ~~~~~lv~e~~~~-~L~~~~~~~~----------~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~ 170 (329)
T 3gbz_A 105 NHRLHLIFEYAEN-DLKKYMDKNP----------DVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDA 170 (329)
T ss_dssp TTEEEEEEECCSE-EHHHHHHHCT----------TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC---
T ss_pred CCEEEEEEecCCC-CHHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCC
Confidence 5578999999985 9999886443 27888999999999999999999 699999999999999
Q ss_pred CCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCC-CCC
Q 035691 590 DNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ-VST 639 (640)
Q Consensus 590 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ 639 (640)
+..+.+||+|||+++...... .......||+.|+|||++.+.. ++.
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~ 217 (329)
T 3gbz_A 171 SETPVLKIGDFGLARAFGIPI----RQFTHEIITLWYRPPEILLGSRHYST 217 (329)
T ss_dssp --CCEEEECCTTHHHHHC---------------CCTTCCHHHHTTCCCCCT
T ss_pred CccceEEECcCCCccccCCcc----cccCCCcCCccccCHHHhcCCCCCCc
Confidence 455669999999998654221 1122346899999999998754 443
No 209
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.95 E-value=4.5e-28 Score=250.31 Aligned_cols=180 Identities=32% Similarity=0.482 Sum_probs=140.4
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHH--HHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEA--LRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|++ +++.||||++..... ..+..|.++ +..++||||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46788999999999999999987 689999999964432 344445444 44589999999998765444455567
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeeeCCCCCCCeeeCC
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHC------KKQIVHCDLKPSNVLLDN 591 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~------~~~ivHrdlkp~NiLl~~ 591 (640)
.++||||+++|+|.+++.... .++..+..++.|++.||+|||+.+ .++|+||||||+|||++.
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~ 155 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-----------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-----------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT
T ss_pred EEEEEecCCCCcHHHHHhhcc-----------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC
Confidence 889999999999999995432 478889999999999999999831 119999999999999999
Q ss_pred CCcEEEccccccccCCCccCC----CceeeccccccccccCcccCCCC
Q 035691 592 DMIAHVGDFGLTRFIPEVISS----NQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 592 ~~~~kl~DfGla~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
++.+||+|||+++.+...... .........||+.|+|||++.+.
T Consensus 156 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 203 (336)
T 3g2f_A 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGA 203 (336)
T ss_dssp TSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTC
T ss_pred CCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCC
Confidence 999999999999876432211 11122345699999999999873
No 210
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.95 E-value=4.2e-28 Score=253.12 Aligned_cols=178 Identities=24% Similarity=0.340 Sum_probs=132.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCC-cCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSD-FQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~~ 516 (640)
.++|+..+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+++++.++||||+++++++.... .....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 47789999999999999999999999999999998543 2334578889999999999999999999975432 22334
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+ +++|.+++... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+|
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----------~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~k 172 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----------KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELK 172 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred eEEEEeccc-CCCHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEE
Confidence 678999999 67998887531 27888999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCC-CCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG-SQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ 639 (640)
|+|||+++..... ....+||++|+|||++.+ ..++.
T Consensus 173 L~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~ 209 (367)
T 2fst_X 173 ILDFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQ 209 (367)
T ss_dssp ECC----------------------CCCTTCCHHHHTTCCSCCT
T ss_pred Eeecccccccccc-------CCCcCcCcCccChHHHcCCcCCCc
Confidence 9999999865321 223568999999999987 45554
No 211
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.95 E-value=9.2e-28 Score=240.63 Aligned_cols=177 Identities=23% Similarity=0.318 Sum_probs=149.3
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++. .....+
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 81 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQY 81 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE-----cCCEEE
Confidence 46888999999999999999999899999999996443 334578899999999999999999999954 345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~d 148 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISD 148 (276)
T ss_dssp EEEECCTTEEGGGGSBTTT----------BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred EEEEecCCCcHHHHHhhcc----------CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEee
Confidence 9999999999999986432 37889999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
||.++.+..... ........||+.|+|||++.+..+
T Consensus 149 fg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~ 184 (276)
T 2yex_A 149 FGLATVFRYNNR--ERLLNKMCGTLPYVAPELLKRREF 184 (276)
T ss_dssp CTTCEECEETTE--ECCBCCCCSCGGGCCGGGGTCSSB
T ss_pred CCCccccCCCcc--hhcccCCccccCccChHHHhcCCC
Confidence 999986532211 111223568999999999987664
No 212
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.95 E-value=3.3e-28 Score=255.78 Aligned_cols=190 Identities=26% Similarity=0.372 Sum_probs=150.9
Q ss_pred cCCCcccCcccccccceEEEEEECC-------CCeEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCCcceeEeeccC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDP-------DQTVVAVKVLFLHQ-RGALKSFMAECEALRNI-RHRNLVKIITACSSS 510 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 510 (640)
.++|.+.+.||+|+||.||+|++.. .+..||||+++... ....+.+.+|+++++++ +|||||+++++|.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec--
Confidence 4568888999999999999999742 34689999996443 34457899999999999 9999999999964
Q ss_pred CcCCCceeeEEeeccCCCChhhhcCCCCCCCC------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCC
Q 035691 511 DFQGNDFKALVYEFMHHGSLESWLHPESASDD------LNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKP 584 (640)
Q Consensus 511 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp 584 (640)
.....++||||+++|+|.+++........ .......+++..++.++.|++.||+|||+ .+|+||||||
T Consensus 146 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp 219 (382)
T 3tt0_A 146 ---QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAA 219 (382)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCG
T ss_pred ---cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCc
Confidence 34468999999999999999965432110 00112358999999999999999999999 6999999999
Q ss_pred CCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 585 SNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 585 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+++.++.+||+|||+|+....... ........||+.|+|||++.+..++.
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~ 272 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDY--YKKTTNGRLPVKWMAPEALFDRIYTH 272 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCT--TCCCTTCCCGGGGSCHHHHHSCCCCH
T ss_pred ceEEEcCCCcEEEcccCcccccccccc--cccccCCCCCcceeCHHHhcCCCCCc
Confidence 999999999999999999986643221 11223345789999999998877664
No 213
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.95 E-value=4.2e-28 Score=250.01 Aligned_cols=176 Identities=26% Similarity=0.398 Sum_probs=143.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR--GALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++. .....
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 99 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-----KKKRW 99 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-----cCCEE
Confidence 468888999999999999999999999999999854432 23466889999999999999999999964 34578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||++++++.++..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 100 ~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~ 166 (331)
T 4aaa_A 100 YLVFEFVDHTILDDLELFPN----------GLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLC 166 (331)
T ss_dssp EEEEECCSEEHHHHHHHSTT----------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEecCCcchHHHHHhhcc----------CCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEE
Confidence 99999999999988765332 27889999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCC-CCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS-QVS 638 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s 638 (640)
|||+++.+..... ......||+.|+|||++.+. .++
T Consensus 167 Dfg~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~ 203 (331)
T 4aaa_A 167 DFGFARTLAAPGE----VYDDEVATRWYRAPELLVGDVKYG 203 (331)
T ss_dssp CCTTC----------------CCCCCTTCCHHHHTTCTTCC
T ss_pred eCCCceeecCCcc----ccCCCcCCccccCcccccCCCCcc
Confidence 9999986543211 12234689999999999875 444
No 214
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.95 E-value=5.5e-28 Score=245.13 Aligned_cols=180 Identities=22% Similarity=0.288 Sum_probs=149.0
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCcee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ..+.+.+|+.+++.+ +|++++++++++ ......
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEGLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EETTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeec-----CCCcee
Confidence 467899999999999999999998899999999985332 234578899999999 799999999985 344578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc----
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI---- 594 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~---- 594 (640)
++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~ 148 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCG---------RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNAN 148 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTT---------TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTT
T ss_pred EEEEEec-CCCHHHHHHHhc---------cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCC
Confidence 9999999 999999996432 237899999999999999999999 69999999999999987776
Q ss_pred -EEEccccccccCCCccCCCc---eeeccccccccccCcccCCCCCCCC
Q 035691 595 -AHVGDFGLTRFIPEVISSNQ---CSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 -~kl~DfGla~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+++.......... .......||+.|+|||++.+..++.
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 197 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSR 197 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCH
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCCh
Confidence 99999999987654322111 1223457999999999998887764
No 215
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.95 E-value=6.4e-28 Score=251.90 Aligned_cols=188 Identities=23% Similarity=0.280 Sum_probs=147.5
Q ss_pred CHHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc-----------hhHHHHHHHHHHHHhcCCCCC
Q 035691 432 SYESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR-----------GALKSFMAECEALRNIRHRNL 500 (640)
Q Consensus 432 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~H~ni 500 (640)
..+++....++|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|++++++++||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 35677888999999999999999999999987 599999999843221 123789999999999999999
Q ss_pred cceeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 035691 501 VKIITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHC 580 (640)
Q Consensus 501 v~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHr 580 (640)
+++++++...+.......++||||++ |++.+++.... ..+++..+..++.|++.||.|||+ .+|+||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~ 158 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---------IVISPQHIQYFMYHILLGLHVLHE---AGVVHR 158 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCC
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHH---CcCEec
Confidence 99999976544344557899999998 58888776433 237889999999999999999999 699999
Q ss_pred CCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCC-CCCC
Q 035691 581 DLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG-SQVS 638 (640)
Q Consensus 581 dlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s 638 (640)
||||+||+++.++.+||+|||+++...... ......||+.|+|||++.+ ..++
T Consensus 159 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~ 212 (362)
T 3pg1_A 159 DLHPGNILLADNNDITICDFNLAREDTADA-----NKTHYVTHRWYRAPELVMQFKGFT 212 (362)
T ss_dssp CCCGGGEEECTTCCEEECCTTC--------------------CGGGCCHHHHTTCTTCC
T ss_pred CCChHHEEEcCCCCEEEEecCccccccccc-----ccceecccceecCcHHhcCCCCCC
Confidence 999999999999999999999998543221 1223468999999999877 4444
No 216
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.95 E-value=4.6e-28 Score=243.80 Aligned_cols=176 Identities=23% Similarity=0.304 Sum_probs=146.9
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc------hhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR------GALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
++|++.+.||+|+||.||+|++..+|+.||+|++..... ...+.+.+|+.++++++||||+++++++. .
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~ 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE-----N 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----C
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec-----C
Confidence 358888999999999999999998999999999864321 13578999999999999999999999964 3
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC-
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM- 593 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~- 593 (640)
....++||||+++++|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~ 146 (283)
T 3bhy_A 80 KTDVVLILELVSGGELFDFLAEKE----------SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNV 146 (283)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSS
T ss_pred CCeEEEEEeecCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCC
Confidence 457899999999999999986432 37889999999999999999999 6999999999999998877
Q ss_pred ---cEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 594 ---IAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 594 ---~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
.+||+|||+++...... ......||+.|+|||++.+..++.
T Consensus 147 ~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~ 190 (283)
T 3bhy_A 147 PNPRIKLIDFGIAHKIEAGN-----EFKNIFGTPEFVAPEIVNYEPLGL 190 (283)
T ss_dssp SSCCEEECCCTTCEECC-------------CCCGGGCCHHHHTTCCCCT
T ss_pred CCCceEEEecccceeccCCC-----cccccCCCcCccCcceecCCCCCc
Confidence 89999999998654321 112345899999999998887764
No 217
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.95 E-value=7.9e-29 Score=249.21 Aligned_cols=180 Identities=26% Similarity=0.385 Sum_probs=137.4
Q ss_pred hcCCCcccCcccccccceEEEEEECC---CCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDP---DQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
..++|++.+.||+|+||.||+|++.. .+..||+|++.... ....+.+.+|+.++++++||||+++++++.
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 34578889999999999999999864 35679999986433 334578999999999999999999999852
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
++..++||||+++|+|.+++.... ..+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~ 154 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVRK---------YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDC 154 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTT---------TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTE
T ss_pred cCccEEEEecCCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCC
Confidence 235789999999999999986433 237889999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+++....... .......+|+.|+|||++.+..++.
T Consensus 155 ~kl~Dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~ 196 (281)
T 1mp8_A 155 VKLGDFGLSRYMEDSTY---YKASKGKLPIKWMAPESINFRRFTS 196 (281)
T ss_dssp EEECC----------------------CCGGGCCHHHHHHCCCSH
T ss_pred EEECccccccccCcccc---cccccCCCcccccChhhcccCCCCC
Confidence 99999999987643221 1122234788999999987766653
No 218
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.95 E-value=1.9e-28 Score=246.66 Aligned_cols=180 Identities=26% Similarity=0.438 Sum_probs=149.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc-------
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDF------- 512 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------- 512 (640)
.++|+..+.||+|+||.||+|++..+++.||+|++.... +.+.+|++++++++||||+++++++....+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 345888999999999999999999899999999996543 346789999999999999999998743211
Q ss_pred ----CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCee
Q 035691 513 ----QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVL 588 (640)
Q Consensus 513 ----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiL 588 (640)
......++||||+++|+|.+++..... ..+++..++.++.|++.||.|||+ .+|+||||||+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil 154 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--------EKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIF 154 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGG--------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccC--------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEE
Confidence 124457999999999999999964322 237889999999999999999999 69999999999999
Q ss_pred eCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 589 LDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 589 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
++.++.+||+|||+++....... .....||+.|+|||++.+..++.
T Consensus 155 ~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~ 200 (284)
T 2a19_B 155 LVDTKQVKIGDFGLVTSLKNDGK-----RTRSKGTLRYMSPEQISSQDYGK 200 (284)
T ss_dssp EEETTEEEECCCTTCEESSCCSC-----CCCCCSCCTTSCHHHHHCSCCCT
T ss_pred EcCCCCEEECcchhheecccccc-----ccccCCcccccChhhhccCCCcc
Confidence 99999999999999986643221 12345899999999998877664
No 219
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.95 E-value=5.7e-28 Score=246.20 Aligned_cols=174 Identities=29% Similarity=0.428 Sum_probs=139.4
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeE
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKAL 520 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~l 520 (640)
++|++.+.||+|+||.||+|++. ++.||||++.. ....+.+.+|++++++++||||+++++++. +..++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~l 76 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCL 76 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEE
Confidence 45788899999999999999984 78999999853 334578999999999999999999999853 23689
Q ss_pred EeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc-EEEcc
Q 035691 521 VYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI-AHVGD 599 (640)
Q Consensus 521 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~-~kl~D 599 (640)
||||+++|+|.+++...... ..+++..++.++.|++.||+|||+....+|+||||||+||+++.++. +||+|
T Consensus 77 v~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~D 149 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGAEPL-------PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149 (307)
T ss_dssp EEECCTTCBHHHHHHCSSSE-------ECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECC
T ss_pred EEEcCCCCCHHHHHhccCCC-------CccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcc
Confidence 99999999999999754321 23678889999999999999999854458999999999999998886 79999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++...... ....||+.|+|||++.+..++.
T Consensus 150 fg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~ 182 (307)
T 2eva_A 150 FGTACDIQTHM-------TNNKGSAAWMAPEVFEGSNYSE 182 (307)
T ss_dssp CCC-------------------CCTTSSCHHHHTCCCCCT
T ss_pred ccccccccccc-------ccCCCCCceEChhhhCCCCCCc
Confidence 99997553211 1235899999999999887765
No 220
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.95 E-value=9.6e-28 Score=251.24 Aligned_cols=180 Identities=23% Similarity=0.278 Sum_probs=141.5
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCC-cCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSD-FQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+.+++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46789999999999999999999999999999999643 2334567889999999999999999999975432 12334
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++ +|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------------~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~k 167 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 167 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEcCCC-CHHHHHhh------------ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEE
Confidence 68999999975 78777742 26788899999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|+|||+++...... ......||+.|+|||++.+..++.+
T Consensus 168 l~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~ 206 (371)
T 2xrw_A 168 ILDFGLARTAGTSF-----MMTPYVVTRYYRAPEVILGMGYKEN 206 (371)
T ss_dssp ECCCCC---------------------CTTCCHHHHTTCCCCTT
T ss_pred EEEeeccccccccc-----ccCCceecCCccCHHHhcCCCCCch
Confidence 99999998653211 1223568999999999999887754
No 221
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.95 E-value=1.1e-28 Score=257.39 Aligned_cols=176 Identities=25% Similarity=0.359 Sum_probs=148.5
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. .....+
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 107 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEIS 107 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE-----ETTEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE-----ECCEEE
Confidence 46888999999999999999999999999999996543 344578999999999999999999999964 345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|
T Consensus 108 lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~D 175 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKAG----------RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCD 175 (360)
T ss_dssp EEECCCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECC
T ss_pred EEEECCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEE
Confidence 9999999999999986432 278889999999999999999982 2899999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++..... ......||+.|+|||++.+..++.
T Consensus 176 fg~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ 209 (360)
T 3eqc_A 176 FGVSGQLIDS------MANSFVGTRSYMSPERLQGTHYSV 209 (360)
T ss_dssp CCCCHHHHHH------C----CCCCTTCCHHHHTTCCCSH
T ss_pred CCCCcccccc------cccCCCCCCCeECHHHHcCCCCCc
Confidence 9999754321 112346899999999999887764
No 222
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.95 E-value=3.7e-28 Score=263.77 Aligned_cols=174 Identities=29% Similarity=0.367 Sum_probs=145.6
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|++.+.||+|+||.||+|+++.+++.||||++.... ......+.+|++++++++|||||++++++. .....
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~~ 96 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----DSSSF 96 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEE
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE-----cCCEE
Confidence 45889999999999999999999999999999995432 334578999999999999999999999954 44578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeC---CCCcE
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLD---NDMIA 595 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~---~~~~~ 595 (640)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++ .++.+
T Consensus 97 ~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~ 163 (486)
T 3mwu_A 97 YIVGELYTGGELFDEIIKRK----------RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDI 163 (486)
T ss_dssp EEEECCCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCE
T ss_pred EEEEEcCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCE
Confidence 99999999999998885432 27889999999999999999999 6999999999999995 45689
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
||+|||+++.+.... .....+||+.|+|||++.+. ++
T Consensus 164 kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-~~ 200 (486)
T 3mwu_A 164 KIIDFGLSTCFQQNT-----KMKDRIGTAYYIAPEVLRGT-YD 200 (486)
T ss_dssp EECSCSCTTTBCCC---------CCTTGGGGCCGGGGGSC-CC
T ss_pred EEEECCcCeECCCCC-----ccCCCcCCCCCCCHHHhCCC-CC
Confidence 999999998664321 12235699999999998763 44
No 223
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.95 E-value=6.6e-28 Score=245.62 Aligned_cols=172 Identities=31% Similarity=0.475 Sum_probs=138.1
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
..++|++.+.||+|+||.||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++. .+
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~ 104 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KD 104 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SS
T ss_pred cccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------cC
Confidence 3467889999999999999999864 358899886433 334578999999999999999999999853 23
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~k 172 (307)
T 3lb7_A 105 NLAIVTQWCEGSSLYKHLHVQE---------TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVK 172 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEE
T ss_pred cEEEEEecCCCCcHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEE
Confidence 4689999999999999986433 238889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
|+|||+|+....... ........||+.|+|||++.
T Consensus 173 l~DFg~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~ 207 (307)
T 3lb7_A 173 IGDFGLATVKSRWSG--SQQVEQPTGSVLWMAPEVIR 207 (307)
T ss_dssp ECCCCSSCC--------------CCCCTTSCCHHHHH
T ss_pred EccCCCceecccccc--cccccCCCCCcceECcceee
Confidence 999999986532211 11222346999999999986
No 224
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.95 E-value=1.2e-28 Score=253.20 Aligned_cols=176 Identities=24% Similarity=0.402 Sum_probs=138.7
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccch-hHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRG-ALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
++|.+.+.||+|+||.||+|++..+++.||||++...... ....+.+|+++++.++||||+++++++. .....+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE-----CSSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe-----eCCEEE
Confidence 4688899999999999999999999999999999644322 1224567999999999999999999954 345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||++ |+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 77 lv~e~~~-~~l~~~~~~~~---------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~D 143 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCG---------NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLAD 143 (324)
T ss_dssp EEEECCS-EEHHHHHHHTT---------TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECS
T ss_pred EEecccc-cCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEcc
Confidence 9999998 58888886433 237888999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCC-CCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS-QVS 638 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s 638 (640)
||+++...... .......||+.|+|||++.+. .++
T Consensus 144 fg~a~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~ 179 (324)
T 3mtl_A 144 FGLARAKSIPT----KTYDNEVVTLWYRPPDILLGSTDYS 179 (324)
T ss_dssp SSEEECC----------------CGGGCCHHHHTTCCCCC
T ss_pred CcccccccCCc----cccccccCcccccChhhhcCCCCCC
Confidence 99998653221 112234689999999998873 344
No 225
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.95 E-value=1.2e-28 Score=265.14 Aligned_cols=180 Identities=23% Similarity=0.443 Sum_probs=148.4
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
...++|.+.+.||+|+||.||+|++. ++..||||+++... ...+.|.+|+.+|++++|||||++++++. .+.
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~ 256 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEP 256 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred echHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCc
Confidence 34566888899999999999999987 57889999996543 34578999999999999999999999963 235
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++|||||++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl 325 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDEG--------SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKI 325 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHHH--------HTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEE
T ss_pred cEEEEeecCCCcHHHHHHhccC--------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEE
Confidence 7899999999999999964321 137788899999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++...... ........+|+.|+|||++.+..++.
T Consensus 326 ~DFG~a~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~ 364 (454)
T 1qcf_A 326 ADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGSFTI 364 (454)
T ss_dssp CSTTGGGGBCCHH---HHTTCSSSSCGGGSCHHHHHHCCCCH
T ss_pred eeCCCceEcCCCc---eeccCCCcccccccCHHHhccCCCCc
Confidence 9999998664321 11112234678999999998777664
No 226
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=1.4e-26 Score=233.46 Aligned_cols=201 Identities=24% Similarity=0.253 Sum_probs=150.7
Q ss_pred CCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCC
Q 035691 80 LPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCT 159 (640)
Q Consensus 80 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~ 159 (640)
+++++.+++++|.++.+ |..+. ++|++|+|++|+|++..+..|..+++|++|+|++|.|+.++. ...++
T Consensus 9 l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--------~~~l~ 77 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--------DGTLP 77 (290)
T ss_dssp STTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--------CSCCT
T ss_pred cCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--------CCCCC
Confidence 34444444444444422 22221 456666666666666666666666666666666666665421 24566
Q ss_pred CcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccC
Q 035691 160 YLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSK 239 (640)
Q Consensus 160 ~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 239 (640)
+|++|++++|+++.+|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|
T Consensus 78 ~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L---- 153 (290)
T 1p9a_G 78 VLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL---- 153 (290)
T ss_dssp TCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE----
T ss_pred cCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE----
Confidence 7777777777777777777788889999999999988777889999999999999999998888888888888888
Q ss_pred ccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCC
Q 035691 240 TIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHG 308 (640)
Q Consensus 240 n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 308 (640)
+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++..
T Consensus 154 ------------~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 154 ------------SLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp ------------ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ------------ECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 78888888777778889999999999999998 677778888899999999999874
No 227
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.95 E-value=9.3e-28 Score=242.54 Aligned_cols=177 Identities=26% Similarity=0.391 Sum_probs=146.5
Q ss_pred CCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 442 GFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.|.+.+.||+|+||.||+|.+..++..||+|++... .....+.+.+|+.+++.++||||+++++++... .......+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceEE
Confidence 366778899999999999999999999999998643 234557899999999999999999999987543 23456789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeeCCCCCCCeeeC-CCCcEE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQ--IVHCDLKPSNVLLD-NDMIAH 596 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~--ivHrdlkp~NiLl~-~~~~~k 596 (640)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+ |+||||||+||+++ +++.+|
T Consensus 106 lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~k 172 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK----------VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVK 172 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEE
T ss_pred EEEEecCCCCHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEE
Confidence 9999999999999986432 27888999999999999999999 46 99999999999997 789999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||++...... ......||+.|+|||++.+ .++.
T Consensus 173 l~Dfg~~~~~~~~------~~~~~~~t~~y~aPE~~~~-~~~~ 208 (290)
T 1t4h_A 173 IGDLGLATLKRAS------FAKAVIGTPEFMAPEMYEE-KYDE 208 (290)
T ss_dssp ECCTTGGGGCCTT------SBEESCSSCCCCCGGGGGT-CCCT
T ss_pred EeeCCCccccccc------ccccccCCcCcCCHHHHhc-cCCC
Confidence 9999999754322 1123468999999998864 3543
No 228
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.95 E-value=2.8e-28 Score=250.73 Aligned_cols=188 Identities=25% Similarity=0.354 Sum_probs=148.3
Q ss_pred ccCHHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCCcceeEeec
Q 035691 430 NVSYESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNI-RHRNLVKIITACS 508 (640)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 508 (640)
.++++++....++|++.+.||+|+||.||+|++..+|+.||||++..... ..+.+.+|+.+++++ +||||+++++++.
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 34455556677889999999999999999999998999999999965433 346789999999999 8999999999975
Q ss_pred cCCcC-CCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCe
Q 035691 509 SSDFQ-GNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNV 587 (640)
Q Consensus 509 ~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~Ni 587 (640)
..... .....++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+ .+|+||||||+||
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NI 160 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--------NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNV 160 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGG--------GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhccc--------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHE
Confidence 43211 14578999999999999999865322 237888999999999999999999 6999999999999
Q ss_pred eeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 588 LLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 588 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
+++.++.+||+|||+++....... ......||+.|+|||++.
T Consensus 161 l~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~ 202 (326)
T 2x7f_A 161 LLTENAEVKLVDFGVSAQLDRTVG----RRNTFIGTPYWMAPEVIA 202 (326)
T ss_dssp EECTTCCEEECCCTTTC-----------------CCGGGCCHHHHC
T ss_pred EEcCCCCEEEeeCcCceecCcCcc----ccccccCCccccChhhhc
Confidence 999999999999999986543211 122346899999999987
No 229
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.95 E-value=6.8e-28 Score=250.77 Aligned_cols=185 Identities=26% Similarity=0.394 Sum_probs=149.7
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
..++|++.+.||+|+||.||+|++..+|+.||||++.... ......+.+|+++++.++||||+++++++....+.....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3567899999999999999999999999999999996433 334567889999999999999999999986655555677
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+. |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~-----------~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl 153 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ-----------MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKV 153 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEE
T ss_pred EEEEEeccC-ccHHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEE
Confidence 899999997 5898887532 27888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCC------ceeeccccccccccCcccCCC-CCCC
Q 035691 598 GDFGLTRFIPEVISSN------QCSSVGLKGTVGYAAPEYGMG-SQVS 638 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-~~~s 638 (640)
+|||+++......... ........||+.|+|||++.+ ..++
T Consensus 154 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 201 (353)
T 2b9h_A 154 CDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYS 201 (353)
T ss_dssp CCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCC
T ss_pred EecccccccccccccccCccccccchhhccccccccCCeeeccCCCcc
Confidence 9999998764322110 111223568999999998754 4443
No 230
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.95 E-value=5.8e-28 Score=252.18 Aligned_cols=176 Identities=27% Similarity=0.413 Sum_probs=147.8
Q ss_pred HHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc--------hhHHHHHHHHHHHHhc-CCCCCcceeEe
Q 035691 436 LLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR--------GALKSFMAECEALRNI-RHRNLVKIITA 506 (640)
Q Consensus 436 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l~~~ 506 (640)
.....++|++.+.||+|+||.||+|+++.+|+.||||++..... ...+.+.+|+.+++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 34445678999999999999999999988999999999864431 1245788999999999 89999999999
Q ss_pred eccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCC
Q 035691 507 CSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSN 586 (640)
Q Consensus 507 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~N 586 (640)
+. .....++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+|
T Consensus 169 ~~-----~~~~~~lv~e~~~g~~L~~~l~~~~----------~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~N 230 (365)
T 2y7j_A 169 YE-----SSSFMFLVFDLMRKGELFDYLTEKV----------ALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPEN 230 (365)
T ss_dssp EE-----BSSEEEEEECCCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred Ee-----eCCEEEEEEEeCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHH
Confidence 53 3457899999999999999986432 37889999999999999999999 699999999999
Q ss_pred eeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 587 VLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 587 iLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
|+++.++.+||+|||++..+.... ......||+.|+|||++.+
T Consensus 231 Il~~~~~~ikl~DfG~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~ 273 (365)
T 2y7j_A 231 ILLDDNMQIRLSDFGFSCHLEPGE-----KLRELCGTPGYLAPEILKC 273 (365)
T ss_dssp EEECTTCCEEECCCTTCEECCTTC-----CBCCCCSCGGGCCHHHHHH
T ss_pred EEECCCCCEEEEecCcccccCCCc-----ccccCCCCCCccChhhccc
Confidence 999999999999999998664321 1223569999999999864
No 231
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=6.6e-28 Score=253.65 Aligned_cols=184 Identities=22% Similarity=0.296 Sum_probs=142.4
Q ss_pred HHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc----
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDF---- 512 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 512 (640)
....++|++.+.||+|+||.||+|++..+|+.||||++..... ...+|+++++.++|||||++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3456789999999999999999999999999999999854322 22479999999999999999999754321
Q ss_pred -----------------------------CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 035691 513 -----------------------------QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVA 563 (640)
Q Consensus 513 -----------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 563 (640)
....+.++||||+++ +|.+.+...... ...+++..+..++.|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~------~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRS------GRSIPMNLISIYIYQLF 151 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHT------TCCCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhc------CCCCCHHHHHHHHHHHH
Confidence 234458899999984 777666421110 12388999999999999
Q ss_pred HHHHHHhcCCCCCeeeCCCCCCCeeeC-CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCC-CCC
Q 035691 564 SALEYLHHHCKKQIVHCDLKPSNVLLD-NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ-VST 639 (640)
Q Consensus 564 ~al~yLH~~~~~~ivHrdlkp~NiLl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ 639 (640)
.||+|||+ .+|+||||||+||+++ .++.+||+|||+|+.+.... ......||+.|+|||++.+.. ++.
T Consensus 152 ~aL~~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~ 221 (383)
T 3eb0_A 152 RAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-----PSVAYICSRFYRAPELMLGATEYTP 221 (383)
T ss_dssp HHHHHHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-----CCCCCCCCSSCCCHHHHTTCSSCCT
T ss_pred HHHHHHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-----CCcCcccCCCccCHHHhcCCCCCCc
Confidence 99999998 6999999999999997 68999999999998664321 122346899999999988754 553
No 232
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.95 E-value=3e-28 Score=249.04 Aligned_cols=189 Identities=24% Similarity=0.354 Sum_probs=149.0
Q ss_pred cCCCcccCcccccccceEEEEEE-----CCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGIL-----DPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQ 513 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 513 (640)
.++|.+.+.||+|+||.||+|++ +.+++.||||++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----- 96 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----- 96 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe-----
Confidence 45688889999999999999987 3456899999996433 344578999999999999999999999953
Q ss_pred CCceeeEEeeccCCCChhhhcCCCCCCCC--------------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 035691 514 GNDFKALVYEFMHHGSLESWLHPESASDD--------------LNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVH 579 (640)
Q Consensus 514 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivH 579 (640)
.....++||||+++|+|.+++........ .......+++..++.++.|++.||.|||+ .+|+|
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH 173 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVH 173 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEEC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcc
Confidence 34568999999999999999965432100 00011347889999999999999999999 69999
Q ss_pred CCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 580 CDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 580 rdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
|||||+||+++.++.+||+|||+++....... ........+|+.|+|||++.+..++
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~ 230 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDS--YVKRSQGRIPVKWMAIESLFDHIYT 230 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSC--EECSSCCCSCGGGCCHHHHHHCEEC
T ss_pred cccchheEEEcCCCCEEEcccccccccccccc--ceeccCCCCcccccChhhhcCCCcC
Confidence 99999999999999999999999986643221 1122234578899999998776554
No 233
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=4.6e-28 Score=251.07 Aligned_cols=193 Identities=25% Similarity=0.361 Sum_probs=149.2
Q ss_pred HHhcCCCcccCcccccccceEEEEEE-----CCCCeEEEEEEeecc-cchhHHHHHHHHHHHHhc-CCCCCcceeEeecc
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGIL-----DPDQTVVAVKVLFLH-QRGALKSFMAECEALRNI-RHRNLVKIITACSS 509 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 509 (640)
+...++|.+.+.||+|+||.||+|++ ..++..||||++... .....+.+.+|+.+++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 34456788999999999999999997 346678999999643 233457899999999999 89999999999643
Q ss_pred CCcCCCceeeEEeeccCCCChhhhcCCCCCCCC-------------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 035691 510 SDFQGNDFKALVYEFMHHGSLESWLHPESASDD-------------LNYSPSILSFLQRLNIAINVASALEYLHHHCKKQ 576 (640)
Q Consensus 510 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ 576 (640)
....++||||+++|+|.+++........ .......+++..++.++.|++.||+|||+ .+
T Consensus 121 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ 192 (344)
T 1rjb_A 121 -----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KS 192 (344)
T ss_dssp -----SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred -----CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence 4468999999999999999975432100 00011347899999999999999999999 69
Q ss_pred eeeCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 577 IVHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 577 ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+||||||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.
T Consensus 193 ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~ 253 (344)
T 1rjb_A 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN--YVVRGNARLPVKWMAPESLFEGIYTI 253 (344)
T ss_dssp EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT--SEEETTEEECGGGCCHHHHHHCCCCH
T ss_pred cccCCCChhhEEEcCCCcEEeCCCccCcccccCcc--ceeccCccCccCccCHHHhccCCCCh
Confidence 99999999999999999999999999986643221 12223345788999999987776653
No 234
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=4.7e-28 Score=249.71 Aligned_cols=182 Identities=26% Similarity=0.469 Sum_probs=140.7
Q ss_pred cCCCcccCcccccccceEEEEEECCC----CeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPD----QTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
.++|+..+.||+|+||.||+|++..+ +..||||++.... ......+.+|++++++++||||+++++++. .
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~ 117 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-----K 117 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-----S
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe-----c
Confidence 35677789999999999999987644 3469999996443 334567999999999999999999999953 3
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
....++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 118 ~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~ 185 (333)
T 1mqb_A 118 YKPMMIITEYMENGALDKFLREKD---------GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLV 185 (333)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHTT---------TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCC
T ss_pred CCCcEEEEeCCCCCcHHHHHHhCC---------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCc
Confidence 457899999999999999986432 237889999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+++........ ........+|+.|+|||++.+..++.
T Consensus 186 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~ 229 (333)
T 1mqb_A 186 CKVSDFGLSRVLEDDPEA-TYTTSGGKIPIRWTAPEAISYRKFTS 229 (333)
T ss_dssp EEECCCCC------------------CCCGGGSCHHHHHSCCCCH
T ss_pred EEECCCCcchhhcccccc-ccccCCCCccccccCchhcccCCCCc
Confidence 999999999876432211 11122334688999999998777654
No 235
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.95 E-value=5.2e-29 Score=255.74 Aligned_cols=196 Identities=24% Similarity=0.336 Sum_probs=152.2
Q ss_pred HHHHHhcCCCcccCcccccccceEEEEEEC-----CCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEee
Q 035691 434 ESLLKATGGFSSANLIGTGSFGSVYKGILD-----PDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITAC 507 (640)
Q Consensus 434 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 507 (640)
++.....++|++.+.||+|+||.||+|++. .+++.||||++.... ......+.+|+.+++.++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344556678999999999999999999876 357889999996433 23446789999999999999999999996
Q ss_pred ccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCe
Q 035691 508 SSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNV 587 (640)
Q Consensus 508 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~Ni 587 (640)
. .....++||||+++|+|.+++...............+++..++.++.|++.||+|||+ .+|+||||||+||
T Consensus 98 ~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NI 169 (322)
T 1p4o_A 98 S-----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 169 (322)
T ss_dssp C-----SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGE
T ss_pred c-----cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceE
Confidence 3 3456799999999999999986422100000001236888999999999999999999 6999999999999
Q ss_pred eeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 588 LLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 588 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+++.++.+||+|||+++....... ........||+.|+|||++.+..++.
T Consensus 170 li~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~ 219 (322)
T 1p4o_A 170 MVAEDFTVKIGDFGMTRDIYETDY--YRKGGKGLLPVRWMSPESLKDGVFTT 219 (322)
T ss_dssp EECTTCCEEECCTTCCCGGGGGGC--EEGGGSSEECGGGCCHHHHHHCCCCH
T ss_pred EEcCCCeEEECcCccccccccccc--cccccCCCCCCCccChhhhccCCCCc
Confidence 999999999999999986543211 11122335789999999988776653
No 236
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.95 E-value=6.2e-28 Score=245.17 Aligned_cols=186 Identities=24% Similarity=0.370 Sum_probs=145.1
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCC--------
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSD-------- 511 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------- 511 (640)
.++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.++++++||||+++++++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 35688899999999999999999989999999999543 334578899999999999999999999875421
Q ss_pred cCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC
Q 035691 512 FQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN 591 (640)
Q Consensus 512 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~ 591 (640)
.......++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~ 151 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN---------LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDE 151 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC---------GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECT
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc---------cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcC
Confidence 123457899999999999999996432 236778899999999999999999 69999999999999999
Q ss_pred CCcEEEccccccccCCCccCC----------CceeeccccccccccCcccCCCC-CCC
Q 035691 592 DMIAHVGDFGLTRFIPEVISS----------NQCSSVGLKGTVGYAAPEYGMGS-QVS 638 (640)
Q Consensus 592 ~~~~kl~DfGla~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~s 638 (640)
++.+||+|||+++........ .........||+.|+|||++.+. .++
T Consensus 152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 209 (303)
T 1zy4_A 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN 209 (303)
T ss_dssp TSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCC
T ss_pred CCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCc
Confidence 999999999999865422100 01112335689999999998764 444
No 237
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=249.82 Aligned_cols=182 Identities=29% Similarity=0.429 Sum_probs=148.8
Q ss_pred CCCcccCcccccccceEEEEEE----CCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 441 GGFSSANLIGTGSFGSVYKGIL----DPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++.... ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~ 117 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---RR 117 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC---CC
Confidence 4578889999999999999984 5689999999997666666688999999999999999999999875322 34
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~k 185 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK---------ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 185 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST---------TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEE
T ss_pred ceEEEEECCCCCCHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEE
Confidence 6789999999999999996543 237889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
|+|||+++........ ........+|..|+|||++.+..++
T Consensus 186 L~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~ 226 (326)
T 2w1i_A 186 IGDFGLTKVLPQDKEY-YKVKEPGESPIFWYAPESLTESKFS 226 (326)
T ss_dssp ECCCTTCEECCSSCSE-EECSSCCSCCGGGCCHHHHHHCEEE
T ss_pred EecCcchhhccccccc-cccccCCCCceeEECchhhcCCCCC
Confidence 9999999876432211 1112224578889999998766554
No 238
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.95 E-value=6.1e-28 Score=243.37 Aligned_cols=174 Identities=24% Similarity=0.345 Sum_probs=144.5
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|+..+..+ +||||+++++++. ..+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~-----~~~ 84 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA-----EDD 84 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE-----ETT
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCC
Confidence 356888999999999999999999999999999996532 33456788999999999 9999999999964 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC-----
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN----- 591 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~----- 591 (640)
..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~ 155 (289)
T 1x8b_A 85 HMLIQNEYCNGGSLADAISENYRI------MSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPN 155 (289)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHHH------TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC------
T ss_pred eEEEEEEecCCCcHHHHHHhhccc------ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCc
Confidence 789999999999999998643210 0237889999999999999999999 69999999999999984
Q ss_pred --------------CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 592 --------------DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 592 --------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
...+||+|||.++...... ...||+.|+|||++.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--------~~~gt~~y~aPE~~~~~ 205 (289)
T 1x8b_A 156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ--------VEEGDSRFLANEVLQEN 205 (289)
T ss_dssp --------------CCCEEECCCTTCEETTCSC--------CCCCCGGGCCHHHHTTC
T ss_pred ccccccccccccCCceEEEEcccccccccCCcc--------ccCCCccccChhHhcCC
Confidence 4479999999998654321 13489999999999875
No 239
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.95 E-value=4.4e-28 Score=251.33 Aligned_cols=185 Identities=20% Similarity=0.299 Sum_probs=143.9
Q ss_pred cCCCcccCcccccccceEEEEEECC---CCeEEEEEEeecccch-----------hHHHHHHHHHHHHhcCCCCCcceeE
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDP---DQTVVAVKVLFLHQRG-----------ALKSFMAECEALRNIRHRNLVKIIT 505 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~ 505 (640)
.++|.+.+.||+|+||.||+|++.. ++..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3578899999999999999999986 7889999998644321 1235778889999999999999999
Q ss_pred eeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCC
Q 035691 506 ACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPS 585 (640)
Q Consensus 506 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~ 585 (640)
++... +.+....++||||+ +|+|.+++.... .+++..++.++.|++.||+|||+ .+|+||||||+
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~ 180 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQNG----------TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAA 180 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG----------BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHH
Confidence 97553 23456889999999 999999986543 38899999999999999999999 69999999999
Q ss_pred CeeeCCCC--cEEEccccccccCCCccCC---CceeeccccccccccCcccCCCCCCCC
Q 035691 586 NVLLDNDM--IAHVGDFGLTRFIPEVISS---NQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 586 NiLl~~~~--~~kl~DfGla~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++.++ .+||+|||+|+.+...... .........||+.|+|||++.+..++.
T Consensus 181 NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 239 (345)
T 2v62_A 181 NLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSR 239 (345)
T ss_dssp GEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCH
T ss_pred HEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCc
Confidence 99998877 9999999999876432211 111123457999999999998887664
No 240
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.95 E-value=4.8e-28 Score=262.91 Aligned_cols=175 Identities=29% Similarity=0.379 Sum_probs=148.0
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||.||+|+++.+|+.||||++.... ....+.+.+|+.++++++|||||++++++. ....
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~ 100 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-----DKGY 100 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eCCE
Confidence 45888899999999999999999999999999995432 334578999999999999999999999953 4558
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee---CCCCc
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL---DNDMI 594 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl---~~~~~ 594 (640)
.++||||+.+|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||++ +.++.
T Consensus 101 ~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~ 167 (484)
T 3nyv_A 101 FYLVGEVYTGGELFDEIISRK----------RFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDAN 167 (484)
T ss_dssp EEEEECCCCSCBHHHHHHTCS----------CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCC
T ss_pred EEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCc
Confidence 899999999999999886543 27889999999999999999999 699999999999999 56789
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+++.+.... .....+||+.|+|||++.+ .++.
T Consensus 168 ~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~ 206 (484)
T 3nyv_A 168 IRIIDFGLSTHFEASK-----KMKDKIGTAYYIAPEVLHG-TYDE 206 (484)
T ss_dssp EEECCTTHHHHBCCCC-----SHHHHTTGGGTCCHHHHHT-CCCT
T ss_pred EEEEeeeeeEEccccc-----ccccCCCCccccCceeecC-CCCC
Confidence 9999999998664321 1223469999999999876 4543
No 241
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.95 E-value=7.6e-28 Score=261.79 Aligned_cols=175 Identities=24% Similarity=0.318 Sum_probs=142.1
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|++.+.||+|+||.||+|+++.++..||||++.... ......+.+|+.+++.++|||||+++++|. .....
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~~ 111 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE-----DKRNY 111 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCEE
Confidence 35888999999999999999999999999999996443 233577899999999999999999999964 44578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC---CcE
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND---MIA 595 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~---~~~ 595 (640)
++|||||++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.. +.+
T Consensus 112 ~lv~e~~~~g~L~~~~~~~~----------~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~ 178 (494)
T 3lij_A 112 YLVMECYKGGELFDEIIHRM----------KFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALI 178 (494)
T ss_dssp EEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCE
T ss_pred EEEEecCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcE
Confidence 99999999999998885432 27888999999999999999999 699999999999999764 559
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+|||+|+.+.... .....+||+.|+|||++.+ .++.
T Consensus 179 kl~DfG~a~~~~~~~-----~~~~~~gt~~y~aPE~l~~-~~~~ 216 (494)
T 3lij_A 179 KIVDFGLSAVFENQK-----KMKERLGTAYYIAPEVLRK-KYDE 216 (494)
T ss_dssp EECCCTTCEECBTTB-----CBCCCCSCTTTCCHHHHTT-CBCT
T ss_pred EEEECCCCeECCCCc-----cccccCCCcCeeCHHHHcc-cCCC
Confidence 999999998764321 1223569999999999864 4553
No 242
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.95 E-value=9.2e-28 Score=261.81 Aligned_cols=176 Identities=26% Similarity=0.365 Sum_probs=145.4
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc-------------hhHHHHHHHHHHHHhcCCCCCcceeEe
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR-------------GALKSFMAECEALRNIRHRNLVKIITA 506 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~~~ 506 (640)
.++|++.+.||+|+||+||+|+++.+++.||||++..... ...+.+.+|+.++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 4678999999999999999999999999999999964321 234678999999999999999999999
Q ss_pred eccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCC
Q 035691 507 CSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSN 586 (640)
Q Consensus 507 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~N 586 (640)
+. .....++|||||++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+|
T Consensus 115 ~~-----~~~~~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~N 176 (504)
T 3q5i_A 115 FE-----DKKYFYLVTEFYEGGELFEQIINRH----------KFDECDAANIMKQILSGICYLHK---HNIVHRDIKPEN 176 (504)
T ss_dssp EE-----CSSEEEEEEECCTTCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred EE-----cCCEEEEEEecCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHH
Confidence 53 4557899999999999999885432 27899999999999999999999 699999999999
Q ss_pred eeeCCCC---cEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 587 VLLDNDM---IAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 587 iLl~~~~---~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+++.++ .+||+|||+++.+.... .....+||+.|+|||++.+ .++.
T Consensus 177 il~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~ 226 (504)
T 3q5i_A 177 ILLENKNSLLNIKIVDFGLSSFFSKDY-----KLRDRLGTAYYIAPEVLKK-KYNE 226 (504)
T ss_dssp EEESSTTCCSSEEECCCTTCEECCTTS-----CBCCCCSCTTTCCHHHHTT-CBCT
T ss_pred EEEecCCCCccEEEEECCCCEEcCCCC-----ccccccCCcCCCCHHHhcc-CCCc
Confidence 9998776 69999999998764321 1223469999999999864 4553
No 243
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.95 E-value=4.2e-28 Score=248.35 Aligned_cols=187 Identities=21% Similarity=0.245 Sum_probs=149.6
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+++++.++||||+++++++.... ......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeE
Confidence 456889999999999999999998899999999997666666788999999999999999999999975321 2345788
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++...... ...+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~d 177 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDK------GNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMD 177 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTT------TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEe
Confidence 999999999999988642111 1338899999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCC-----ceeeccccccccccCcccCCCCC
Q 035691 600 FGLTRFIPEVISSN-----QCSSVGLKGTVGYAAPEYGMGSQ 636 (640)
Q Consensus 600 fGla~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~ 636 (640)
||+++......... ........||+.|+|||++.+..
T Consensus 178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 219 (317)
T 2buj_A 178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQS 219 (317)
T ss_dssp CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCS
T ss_pred cCcchhcccccccccccccccccccccCCcccCCHhHhccCC
Confidence 99987653211110 00112245799999999987654
No 244
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=2.6e-26 Score=229.25 Aligned_cols=178 Identities=26% Similarity=0.313 Sum_probs=91.3
Q ss_pred CCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCC
Q 035691 52 ELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNL 131 (640)
Q Consensus 52 ~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 131 (640)
+|++|+|++|+|+. +|+..+..+++|+.|+|++|+|+.+.+..|.++++|++|+|++|+++++.+..|..+++|
T Consensus 38 ~l~~L~l~~n~l~~------~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 111 (270)
T 2o6q_A 38 DTKKLDLQSNKLSS------LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNL 111 (270)
T ss_dssp TCSEEECCSSCCSC------CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSC
T ss_pred CCCEEECcCCCCCe------eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCC
Confidence 34444444444432 333333344444444444444444444444445555555555555554444444555555
Q ss_pred CEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcC-CCCCCCCCEEEccCCcCcccCCcCccCCCCCCE
Q 035691 132 TRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPIS-VGYLPKLQVLSLFENNISGEIPSSLGNFTFLTE 210 (640)
Q Consensus 132 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 210 (640)
++|+|++|+++.++ +..|.++++|++|++++|.++.+|.. +..+++|++|+|++|.++++.+..|..+++|++
T Consensus 112 ~~L~l~~n~l~~~~------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 185 (270)
T 2o6q_A 112 AELRLDRNQLKSLP------PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKT 185 (270)
T ss_dssp CEEECCSSCCCCCC------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CEEECCCCccCeeC------HHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCE
Confidence 55555555554442 22344445555555555555554433 445566666666666666555555666666666
Q ss_pred EEccCCCCCCCCCccccCCCCccEEeccCcc
Q 035691 211 LNLRGNSIRGSIPSALGNCHQLQSLDLSKTI 241 (640)
Q Consensus 211 L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~ 241 (640)
|+|++|++++..+..|..+++|+.|++++|.
T Consensus 186 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (270)
T 2o6q_A 186 LKLDNNQLKRVPEGAFDSLEKLKMLQLQENP 216 (270)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcCCcCCHHHhccccCCCEEEecCCC
Confidence 6666666665555556666666666444443
No 245
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=1.9e-28 Score=254.94 Aligned_cols=174 Identities=24% Similarity=0.293 Sum_probs=144.7
Q ss_pred CCCcccCcccccccceEEEEEEC---CCCeEEEEEEeeccc----chhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCc
Q 035691 441 GGFSSANLIGTGSFGSVYKGILD---PDQTVVAVKVLFLHQ----RGALKSFMAECEALRNI-RHRNLVKIITACSSSDF 512 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 512 (640)
++|++.+.||+|+||.||+|+.. .+++.||||+++... ....+.+.+|+++++.+ +||||+++++++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---- 129 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ---- 129 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE----
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe----
Confidence 46888999999999999999984 588999999985432 23345677899999999 6999999999853
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND 592 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~ 592 (640)
.....++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.+
T Consensus 130 -~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~ 195 (355)
T 1vzo_A 130 -TETKLHLILDYINGGELFTHLSQRE----------RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSN 195 (355)
T ss_dssp -ETTEEEEEECCCCSCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTT
T ss_pred -eCceEEEEeecCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCC
Confidence 3457899999999999999986432 27888999999999999999999 699999999999999999
Q ss_pred CcEEEccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 593 MIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 593 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
+.+||+|||+++.+..... ......+||+.|+|||++.+.
T Consensus 196 ~~~kl~DfG~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~ 235 (355)
T 1vzo_A 196 GHVVLTDFGLSKEFVADET---ERAYDFCGTIEYMAPDIVRGG 235 (355)
T ss_dssp SCEEESCSSEEEECCGGGG---GGGCGGGSCCTTCCHHHHTTC
T ss_pred CcEEEeeCCCCeecccCCC---CcccCcccCcCccChhhhcCC
Confidence 9999999999986543211 122335699999999999864
No 246
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.95 E-value=7.5e-29 Score=252.10 Aligned_cols=178 Identities=28% Similarity=0.379 Sum_probs=130.3
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHh--cCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRN--IRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|++.+.||+|+||.||+|++ +|+.||||++... ....+.+|.+++.. ++||||+++++++.... ......
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Ccccee
Confidence 5688999999999999999987 4889999998533 33567788888887 79999999999975432 122368
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeeCCCCCCCeeeCCCC
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHC-----KKQIVHCDLKPSNVLLDNDM 593 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~-----~~~ivHrdlkp~NiLl~~~~ 593 (640)
++||||+++|+|.+++.... +++..++.++.|++.||+|||... ..+|+||||||+||+++.++
T Consensus 77 ~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~ 145 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRYT-----------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 145 (303)
T ss_dssp EEEEECCTTCCHHHHHHHCC-----------BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTC
T ss_pred EEEEeccCCCCHHHHHhccC-----------cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCC
Confidence 99999999999999995432 556678899999999999999210 17999999999999999999
Q ss_pred cEEEccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 594 IAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 594 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
.+||+|||+++.................||+.|+|||++.+.
T Consensus 146 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 187 (303)
T 3gxj_A 146 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp CC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred CEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCc
Confidence 999999999986543222111122334699999999998776
No 247
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.95 E-value=5.2e-28 Score=243.75 Aligned_cols=175 Identities=26% Similarity=0.313 Sum_probs=141.6
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
++|.+.+.||+|+||.||+|+++.++..||+|++.... ....+.+.+|++++++++||||+++++++. .....+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~ 96 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE-----DYHNMY 96 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee-----cCCeEE
Confidence 35788899999999999999999999999999996543 334578999999999999999999999963 445789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee---CCCCcEE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL---DNDMIAH 596 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl---~~~~~~k 596 (640)
+||||+++|+|.+++...... ...+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+|
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~k 167 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQAR------GKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIK 167 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHH------TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEE
T ss_pred EEEEeCCCCcHHHHHHhhhhc------ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEE
Confidence 999999999999988532110 0237889999999999999999999 699999999999999 4567899
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
|+|||+++.+.... ......||+.|+|||++.+
T Consensus 168 l~Dfg~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~ 200 (285)
T 3is5_A 168 IIDFGLAELFKSDE-----HSTNAAGTALYMAPEVFKR 200 (285)
T ss_dssp ECCCCCCCC---------------CTTGGGCCHHHHTT
T ss_pred EEeeecceecCCcc-----cCcCcccccCcCChHHhcc
Confidence 99999998654321 1223468999999998754
No 248
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.95 E-value=2.6e-28 Score=262.14 Aligned_cols=179 Identities=28% Similarity=0.489 Sum_probs=142.8
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
..++|++.+.||+|+||.||+|.+. .+..||||+++... ...+.|.+|+++|++++||||+++++++.. ...
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~ 253 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI 253 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred ChhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------Cce
Confidence 3456788899999999999999997 46779999996543 234789999999999999999999999632 357
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~ 322 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVA 322 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHHH--------TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEEehhhcCCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEEC
Confidence 899999999999999964321 237888999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|||+++....... .......+|+.|+|||++.+..++.
T Consensus 323 DfG~a~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~ 360 (452)
T 1fmk_A 323 DFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFTI 360 (452)
T ss_dssp CCCTTC-----------------CCGGGSCHHHHHHCCCCH
T ss_pred CCccceecCCCce---ecccCCcccccccCHhHHhcCCCCc
Confidence 9999987643211 1122345788999999998777664
No 249
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.95 E-value=1.8e-27 Score=243.81 Aligned_cols=183 Identities=23% Similarity=0.366 Sum_probs=142.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCC--------
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSD-------- 511 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------- 511 (640)
.++|++.+.||+|+||.||+|++..+++.||||++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467889999999999999999999899999999997766666788999999999999999999999874321
Q ss_pred -cCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeC
Q 035691 512 -FQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLD 590 (640)
Q Consensus 512 -~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~ 590 (640)
.......++||||++ |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~ 154 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-----------PLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFIN 154 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-----------CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-----------CccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEc
Confidence 133467899999998 5999998532 27788899999999999999999 6999999999999997
Q ss_pred -CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCC-CCCC
Q 035691 591 -NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG-SQVS 638 (640)
Q Consensus 591 -~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s 638 (640)
+++.+||+|||+++........ ........||+.|+|||++.+ ..++
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (320)
T 2i6l_A 155 TEDLVLKIGDFGLARIMDPHYSH-KGHLSEGLVTKWYRSPRLLLSPNNYT 203 (320)
T ss_dssp TTTTEEEECCCTTCBCC---------CCCGGGSCCTTCCHHHHHCTTCCC
T ss_pred CCCCeEEEccCccccccCCCccc-ccccccccccccccCcHHhcCcccCC
Confidence 5679999999999876432111 112223457999999998865 4443
No 250
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.95 E-value=1.5e-27 Score=243.84 Aligned_cols=179 Identities=25% Similarity=0.342 Sum_probs=146.0
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
..++|++.+.||+|+||.||+|++..+|+.||||++.... ..+.+.+|+.+++.++||||+++++++. .....
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF-----KNTDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEE
Confidence 4567889999999999999999999899999999986433 3467899999999999999999999964 34578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~ 167 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRN---------KTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLA 167 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHT---------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEEC
T ss_pred EEEeecCCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEe
Confidence 99999999999999985322 237889999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
|||+++....... ......||+.|+|||++.+..++.+
T Consensus 168 dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~ 205 (314)
T 3com_A 168 DFGVAGQLTDTMA----KRNTVIGTPFWMAPEVIQEIGYNCV 205 (314)
T ss_dssp CCTTCEECBTTBS----CBCCCCSCGGGCCHHHHSSSCBCTT
T ss_pred ecccchhhhhhcc----ccCccCCCCCccChhhcCCCCCCcc
Confidence 9999986543221 1223468999999999988877654
No 251
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.95 E-value=1.7e-27 Score=238.78 Aligned_cols=175 Identities=29% Similarity=0.414 Sum_probs=141.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++. ...
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-----TPT 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----cCC
Confidence 467889999999999999999999899999999996432 234568899999999999999999999954 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++++|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHG----------RVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeccCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEE
Confidence 7899999999999999986432 27888999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
|+|||+++...... ......||+.|+|||++.+..+
T Consensus 152 l~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~ 187 (276)
T 2h6d_A 152 IADFGLSNMMSDGE-----FLRTSCGSPNYAAPEVISGRLY 187 (276)
T ss_dssp ECCCCGGGCCCC------------------CCTGGGTTSCC
T ss_pred EeecccccccCCCc-----ceecccCCccccCHHHHcCCCC
Confidence 99999998654321 1123458999999999987654
No 252
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=242.50 Aligned_cols=174 Identities=25% Similarity=0.363 Sum_probs=142.8
Q ss_pred CcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeEEe
Q 035691 443 FSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKALVY 522 (640)
Q Consensus 443 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~lv~ 522 (640)
|....+||+|+||.||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++. .....++||
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~ 98 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS-----ENGFIKIFM 98 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEEEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEE-----eCCcEEEEE
Confidence 445568999999999999999899999999997666666678999999999999999999999964 345789999
Q ss_pred eccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC-CCcEEEcccc
Q 035691 523 EFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN-DMIAHVGDFG 601 (640)
Q Consensus 523 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~-~~~~kl~DfG 601 (640)
||+++|+|.+++...... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||
T Consensus 99 e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg 168 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWGP-------LKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFG 168 (295)
T ss_dssp ECCSEEEHHHHHHHTTCC-------CTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTT
T ss_pred EeCCCCCHHHHHHhhccC-------CCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecc
Confidence 999999999998643221 236788899999999999999999 69999999999999987 8999999999
Q ss_pred ccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 602 LTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 602 la~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
+++....... ......||+.|+|||++.+.
T Consensus 169 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~ 198 (295)
T 2clq_A 169 TSKRLAGINP----CTETFTGTLQYMAPEIIDKG 198 (295)
T ss_dssp TCEESCC---------CCCCCCGGGCCHHHHHHG
T ss_pred cccccCCCCC----cccccCCCccccChhhhcCC
Confidence 9986543211 12234689999999998654
No 253
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.95 E-value=3.6e-28 Score=247.06 Aligned_cols=173 Identities=26% Similarity=0.352 Sum_probs=141.9
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.+.|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|+++++.++||||+++++++.. ....+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 92 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-----DGKLW 92 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----C-CEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-----CCeEE
Confidence 4568899999999999999999998999999999976666667889999999999999999999999643 44789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 93 lv~e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 160 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELD---------RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLAD 160 (302)
T ss_dssp EEEECCTTEEHHHHHHHHT---------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHHhhc---------cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEE
Confidence 9999999999999875422 237889999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
||++....... .......||+.|+|||++.
T Consensus 161 fg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~ 190 (302)
T 2j7t_A 161 FGVSAKNLKTL----QKRDSFIGTPYWMAPEVVM 190 (302)
T ss_dssp CHHHHHHHHHH----HC-----CCGGGCCHHHHH
T ss_pred CCCCccccccc----cccccccCChhhcCCeeec
Confidence 99986432111 1112346899999999983
No 254
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.95 E-value=4.4e-28 Score=247.70 Aligned_cols=190 Identities=25% Similarity=0.350 Sum_probs=150.3
Q ss_pred cCCCcccCcccccccceEEEEEE-----CCCCeEEEEEEeecccc-hhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGIL-----DPDQTVVAVKVLFLHQR-GALKSFMAECEALRNI-RHRNLVKIITACSSSDF 512 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 512 (640)
.++|++.+.||+|+||.||+|++ ..+++.||||++..... ...+.+.+|+++++++ +||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~--- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI--- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec---
Confidence 45688899999999999999985 45778999999964432 3457899999999999 99999999999643
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCC--------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDD--------LNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKP 584 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--------~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp 584 (640)
....++||||+++|+|.+++........ .......+++..++.++.|++.||.|||+ .+|+||||||
T Consensus 99 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp 173 (313)
T 1t46_A 99 --GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAA 173 (313)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred --CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCcc
Confidence 4467999999999999999865432100 00011248899999999999999999999 6999999999
Q ss_pred CCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 585 SNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 585 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~ 226 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDSN--YVVKGNARLPVKWMAPESIFNCVYTF 226 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCTT--SEECSSSEECGGGCCHHHHHHCCCCH
T ss_pred ceEEEcCCCCEEEcccccccccccccc--ceeccCCCCcceeeChHHhcCCCCCh
Confidence 999999999999999999987654322 11222345788999999987776653
No 255
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.95 E-value=7.9e-28 Score=240.46 Aligned_cols=176 Identities=27% Similarity=0.403 Sum_probs=135.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc----chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ----RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
.++|+..+.||+|+||.||+|++. ++.||||++.... ....+.+.+|+++++.++||||+++++++. ..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL-----KE 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----CC
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-----cC
Confidence 457888999999999999999984 8899999985432 223467899999999999999999999964 34
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC----
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN---- 591 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~---- 591 (640)
...++||||+++|+|.+++... .+++..++.++.|++.|++|||+....+|+||||||+||+++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~-----------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~ 147 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSGK-----------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS-----------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS
T ss_pred CceEEEEEcCCCCCHHHHhhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc
Confidence 4689999999999999998532 3788899999999999999999942123999999999999986
Q ss_pred ----CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 592 ----DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 592 ----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
++.+||+|||+++....... ....||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~ 193 (271)
T 3dtc_A 148 GDLSNKILKITDFGLAREWHRTTK------MSAAGAYAWMAPEVIRASMFSK 193 (271)
T ss_dssp SCCSSCCEEECCCCC-------------------CCGGGSCHHHHHHCCCSH
T ss_pred ccccCcceEEccCCcccccccccc------cCCCCccceeCHHHhccCCCCc
Confidence 67899999999986543211 1345899999999988776654
No 256
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.95 E-value=4.1e-28 Score=248.25 Aligned_cols=200 Identities=22% Similarity=0.322 Sum_probs=156.1
Q ss_pred cCHHHHHHhcCCCcccCcccccccceEEEEEE-----CCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCCcce
Q 035691 431 VSYESLLKATGGFSSANLIGTGSFGSVYKGIL-----DPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNI-RHRNLVKI 503 (640)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l 503 (640)
+...+.....++|++.+.||+|+||.||+|++ ..+++.||||++.... ....+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 44555556677899999999999999999985 3567899999996543 23446799999999999 79999999
Q ss_pred eEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCC------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 035691 504 ITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDD------LNYSPSILSFLQRLNIAINVASALEYLHHHCKKQI 577 (640)
Q Consensus 504 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~i 577 (640)
++++... +...++||||+++|+|.+++........ .......+++..++.++.|++.||.|||+ .+|
T Consensus 97 ~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i 169 (316)
T 2xir_A 97 LGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKC 169 (316)
T ss_dssp EEEECCT----TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTC
T ss_pred EEEEecC----CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCc
Confidence 9997432 3457899999999999999975443100 00001237889999999999999999999 699
Q ss_pred eeCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 578 VHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 578 vHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||||||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.
T Consensus 170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~ 229 (316)
T 2xir_A 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD--YVRKGDARLPLKWMAPETIFDRVYTI 229 (316)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT--SEEETTEEECGGGCCHHHHHHCCCCH
T ss_pred ccccCccceEEECCCCCEEECCCccccccccCcc--ceeccCCCcceeecCchhhccccccc
Confidence 9999999999999999999999999986643221 12223345789999999987776653
No 257
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.95 E-value=2e-28 Score=245.88 Aligned_cols=184 Identities=26% Similarity=0.348 Sum_probs=148.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++... ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CCce
Confidence 356888999999999999999999999999999996443 33457899999999999999999999986432 2457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eeeCCCCCCCeeeCCC
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQ-----IVHCDLKPSNVLLDND 592 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~-----ivHrdlkp~NiLl~~~ 592 (640)
.++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+ .+ |+||||||+||+++.+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~ 152 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKE------RQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGK 152 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSS
T ss_pred EEEEEeCCCCCCHHHHHHhhccc------CCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCC
Confidence 89999999999999998643211 1237889999999999999999999 46 9999999999999999
Q ss_pred CcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 593 MIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 593 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+.+||+|||+++...... .......||+.|+|||++.+..++.
T Consensus 153 ~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~ 195 (279)
T 2w5a_A 153 QNVKLGDFGLARILNHDT----SFAKTFVGTPYYMSPEQMNRMSYNE 195 (279)
T ss_dssp SCEEECCCCHHHHC---C----HHHHHHHSCCTTCCHHHHHCC-CCH
T ss_pred CCEEEecCchheeecccc----ccccccCCCccccChHHhccCCCCc
Confidence 999999999998654311 1112345899999999998877653
No 258
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.94 E-value=1e-27 Score=247.42 Aligned_cols=189 Identities=23% Similarity=0.386 Sum_probs=147.5
Q ss_pred cCCCcccCcccccccceEEEEEEC-------CCCeEEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCCcceeEeeccC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILD-------PDQTVVAVKVLFLHQ-RGALKSFMAECEALRNI-RHRNLVKIITACSSS 510 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 510 (640)
.++|++.+.||+|+||.||+|++. .++..||||++.... ....+.+.+|+++++++ +||||++++++|.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-- 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc--
Confidence 457888999999999999999975 467789999996443 34457899999999999 8999999999964
Q ss_pred CcCCCceeeEEeeccCCCChhhhcCCCCCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCC
Q 035691 511 DFQGNDFKALVYEFMHHGSLESWLHPESASDDL------NYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKP 584 (640)
Q Consensus 511 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~------~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp 584 (640)
.....++||||+++|+|.+++......... ......+++..++.++.|++.||+|||+ .+|+||||||
T Consensus 112 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp 185 (334)
T 2pvf_A 112 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAA 185 (334)
T ss_dssp ---SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSG
T ss_pred ---cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCcc
Confidence 345789999999999999999754321100 0012348899999999999999999999 6999999999
Q ss_pred CCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 585 SNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 585 ~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
+||+++.++.+||+|||+++....... ........+|+.|+|||++.+..++
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~ 237 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDY--YKKTTNGRLPVKWMAPEALFDRVYT 237 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSS--EECCSCCCCCGGGCCHHHHHHCEEC
T ss_pred ceEEEcCCCCEEEcccccccccccccc--ccccCCCCcccceeChHHhcCCCcC
Confidence 999999999999999999986643211 1122234578899999998766554
No 259
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.94 E-value=7e-28 Score=245.90 Aligned_cols=181 Identities=24% Similarity=0.385 Sum_probs=139.4
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
++|++.+.||+|+||.||+|.+..+|+.||||++... .....+.+.+|+.++++++||||+++++++.. ...
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~ 106 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DNE 106 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCc
Confidence 4688899999999999999999889999999999643 33445789999999999999999999999643 457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl 177 (310)
T 2wqm_A 107 LNIVLELADAGDLSRMIKHFKKQ------KRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKL 177 (310)
T ss_dssp EEEEEECCCSCBHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCCHHHHHHHhccc------ccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEE
Confidence 89999999999999988642111 1237888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++...... .......||+.|+|||++.+..++.
T Consensus 178 ~Dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~ 215 (310)
T 2wqm_A 178 GDLGLGRFFSSKT----TAAHSLVGTPYYMSPERIHENGYNF 215 (310)
T ss_dssp CCC----------------------CCSSCCHHHHTTCCCCH
T ss_pred EeccceeeecCCC----ccccccCCCeeEeChHHhCCCCCCc
Confidence 9999998654321 1122346899999999998877653
No 260
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.94 E-value=2.8e-27 Score=243.65 Aligned_cols=171 Identities=22% Similarity=0.316 Sum_probs=144.3
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCCcceeEeeccCCcCCCceee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR-HRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
++|++.+.||+|+||.||+|++..+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.... ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---CCceE
Confidence 5688899999999999999999999999999998633 3367899999999997 999999999975422 45688
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC-cEEEc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM-IAHVG 598 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~-~~kl~ 598 (640)
+||||+++++|.+++. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 110 lv~e~~~~~~l~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~ 173 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ-------------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLI 173 (330)
T ss_dssp EEEECCCCCCHHHHGG-------------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEEC
T ss_pred EEEeccCchhHHHHHH-------------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEE
Confidence 9999999999999874 26778899999999999999999 6999999999999999776 89999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCC-CCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG-SQVS 638 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s 638 (640)
|||+|+....... .....||+.|+|||++.+ ..++
T Consensus 174 Dfg~a~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~ 209 (330)
T 3nsz_A 174 DWGLAEFYHPGQE-----YNVRVASRYFKGPELLVDYQMYD 209 (330)
T ss_dssp CCTTCEECCTTCC-----CCSCCSCGGGCCHHHHTTCCCCC
T ss_pred eCCCceEcCCCCc-----cccccccccccChhhhcCCCcCC
Confidence 9999986643221 123468999999999877 4444
No 261
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.94 E-value=5.8e-28 Score=240.83 Aligned_cols=178 Identities=29% Similarity=0.462 Sum_probs=147.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|++++++++||||+++++++. .....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAPIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCCeE
Confidence 356788899999999999999987 688999999965433 3367899999999999999999999964 344689
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~d 147 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQR---------GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSD 147 (267)
T ss_dssp EEECCCTTCBHHHHHHHTT---------TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECC
T ss_pred EEEeCCCCCcHHHHHhhCc---------ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcc
Confidence 9999999999999986432 237888999999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++...... ........||+.|+|||++.+..++.
T Consensus 148 fg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~ 184 (267)
T 3t9t_A 148 FGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRYSS 184 (267)
T ss_dssp TTGGGGBCCHH---HHSTTSTTCCGGGCCHHHHHHCCCCH
T ss_pred ccccccccccc---ccccccccccccccChhhhcCCCccc
Confidence 99998653211 11122345788999999987766653
No 262
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.94 E-value=2e-27 Score=241.07 Aligned_cols=173 Identities=28% Similarity=0.395 Sum_probs=146.1
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---------chhHHHHHHHHHHHHhcC-CCCCcceeEee
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---------RGALKSFMAECEALRNIR-HRNLVKIITAC 507 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~ 507 (640)
...++|++.+.||+|+||.||+|+++.+|+.||||+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34567899999999999999999999999999999996543 123467889999999995 99999999995
Q ss_pred ccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCe
Q 035691 508 SSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNV 587 (640)
Q Consensus 508 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~Ni 587 (640)
. .....++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||
T Consensus 94 ~-----~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Ni 155 (298)
T 1phk_A 94 E-----TNTFFFLVFDLMKKGELFDYLTEKV----------TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENI 155 (298)
T ss_dssp E-----CSSEEEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred c-----cCCeEEEEEeccCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceE
Confidence 3 4557899999999999999986432 37889999999999999999999 6999999999999
Q ss_pred eeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 588 LLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 588 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
+++.++.+||+|||+++...... ......||+.|+|||++.
T Consensus 156 l~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~ 196 (298)
T 1phk_A 156 LLDDDMNIKLTDFGFSCQLDPGE-----KLREVCGTPSYLAPEIIE 196 (298)
T ss_dssp EECTTCCEEECCCTTCEECCTTC-----CBCCCCSCGGGCCHHHHH
T ss_pred EEcCCCcEEEecccchhhcCCCc-----ccccccCCccccCHHHhc
Confidence 99999999999999998654321 122346899999999875
No 263
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.94 E-value=4.8e-28 Score=248.97 Aligned_cols=180 Identities=24% Similarity=0.411 Sum_probs=140.3
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEE----EEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVV----AVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
.++|++.+.||+|+||.||+|++..+++.| |+|.+... .....+.+.+|+.+++.++||||++++++|...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC----
Confidence 357889999999999999999998777655 66665322 334567899999999999999999999997432
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
..++|+||+.+|+|.+++..... .+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.
T Consensus 90 --~~~~v~~~~~~g~L~~~l~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~ 155 (327)
T 3lzb_A 90 --TVQLITQLMPFGCLLDYVREHKD---------NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp --SEEEEECCCSSCBHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTE
T ss_pred --CceEEEEecCCCcHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCC
Confidence 36799999999999999865432 37889999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+++.+..... ........||+.|+|||++.+..++.
T Consensus 156 ~kL~DfG~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~ 198 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEK--EYHAEGGKVPIKWMALESILHRIYTH 198 (327)
T ss_dssp EEECCTTC------------------CCCGGGSCHHHHHHCCCCH
T ss_pred EEEccCcceeEccCccc--cccccCCCccccccCHHHHcCCCCCh
Confidence 99999999987643221 11222345788999999998877664
No 264
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.4e-27 Score=246.51 Aligned_cols=188 Identities=22% Similarity=0.269 Sum_probs=136.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCCcceeEeeccCC---cCCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR-HRNLVKIITACSSSD---FQGN 515 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~---~~~~ 515 (640)
..+|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++.... ....
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 446888999999999999999999999999999986666666678999999999996 999999999974321 1344
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeeCCCCCCCeeeCCCC
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQ--IVHCDLKPSNVLLDNDM 593 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~--ivHrdlkp~NiLl~~~~ 593 (640)
...++||||+. |+|.+++...... ..+++..++.++.|++.||.|||+ .+ |+||||||+||+++.++
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~ 175 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESR-------GPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQG 175 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTT-------CSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTS
T ss_pred ceEEEEEEecC-CCHHHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCC
Confidence 56899999996 6998887542111 238899999999999999999999 57 99999999999999999
Q ss_pred cEEEccccccccCCCccCCC--------ceeeccccccccccCcccC---CCCCCC
Q 035691 594 IAHVGDFGLTRFIPEVISSN--------QCSSVGLKGTVGYAAPEYG---MGSQVS 638 (640)
Q Consensus 594 ~~kl~DfGla~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~---~~~~~s 638 (640)
.+||+|||+++......... ........||+.|+|||++ .+..++
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~ 231 (337)
T 3ll6_A 176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG 231 (337)
T ss_dssp CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSS
T ss_pred CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCC
Confidence 99999999998764322110 0111234589999999998 444444
No 265
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.2e-27 Score=266.12 Aligned_cols=178 Identities=27% Similarity=0.381 Sum_probs=140.8
Q ss_pred CcccC-cccccccceEEEEEEC--CCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 443 FSSAN-LIGTGSFGSVYKGILD--PDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 443 ~~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
+.+.+ .||+|+||.||+|.++ .++..||||+++... ....+.|.+|+++|++++|||||+++++|.. +..
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~ 410 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EAL 410 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCe
Confidence 33444 7999999999999875 356789999996543 3456789999999999999999999999742 247
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++|||||++|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 411 ~lv~E~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~ 478 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVGKR---------EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKIS 478 (613)
T ss_dssp EEEEECCTTCBHHHHHTTCT---------TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEEC
T ss_pred EEEEEeCCCCcHHHHHhhcc---------CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEe
Confidence 89999999999999996543 238899999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|||+++.+...... ........+|+.|+|||++.+..++.
T Consensus 479 DFGla~~~~~~~~~-~~~~~~~~~~~~y~APE~~~~~~~~~ 518 (613)
T 2ozo_A 479 DFGLSKALGADDSY-YTARSAGKWPLKWYAPECINFRKFSS 518 (613)
T ss_dssp CCSTTTTCC---------------CCTTSCHHHHHHCCCCH
T ss_pred eccCcccccCCCce-eeeccCCCCccceeCHhhhcCCCCCc
Confidence 99999876432211 11112234678999999998777764
No 266
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.94 E-value=6.1e-28 Score=242.43 Aligned_cols=178 Identities=25% Similarity=0.462 Sum_probs=146.3
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
..++|++.+.||+|+||.||+|++. ++..||||++.... ...+.+.+|+++++.++||||+++++++. .+..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~ 82 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPI 82 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCc
Confidence 3456888999999999999999986 67889999986433 24578999999999999999999999863 2347
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 83 ~~v~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~ 151 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKTPSG--------IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIA 151 (279)
T ss_dssp EEEEECCTTCBHHHHTTSHHH--------HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCCHHHHHhcCCC--------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEEC
Confidence 899999999999999864321 137889999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
|||+++...... ........+|+.|+|||++.+..++
T Consensus 152 Dfg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~ 188 (279)
T 1qpc_A 152 DFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFT 188 (279)
T ss_dssp CCTTCEECSSSC---EECCTTCCCCTTTSCHHHHHHCEEC
T ss_pred CCcccccccCcc---cccccCCCCccCccChhhhccCCCC
Confidence 999998664321 1122234578899999998766554
No 267
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.94 E-value=1.6e-27 Score=254.09 Aligned_cols=175 Identities=23% Similarity=0.333 Sum_probs=146.0
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhc------CCCCCcceeEeeccCCcC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNI------RHRNLVKIITACSSSDFQ 513 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~ 513 (640)
..+|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+++++.+ .|+||+++++++.
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~----- 169 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT----- 169 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE-----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc-----
Confidence 45789999999999999999999999999999999643 23346778888888887 5779999999954
Q ss_pred CCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC
Q 035691 514 GNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM 593 (640)
Q Consensus 514 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~ 593 (640)
.....++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 170 ~~~~~~lv~e~~~-~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~ 237 (429)
T 3kvw_A 170 FRNHICMTFELLS-MNLYELIKKNKF--------QGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQG 237 (429)
T ss_dssp ETTEEEEEECCCC-CBHHHHHHHTTT--------CCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTT
T ss_pred cCCeEEEEEeccC-CCHHHHHHhccC--------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCC
Confidence 3457899999996 699988865432 237889999999999999999999 6999999999999999988
Q ss_pred c--EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 594 I--AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 594 ~--~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
. +||+|||+|+..... ....+||+.|+|||++.+..++.
T Consensus 238 ~~~vkL~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~ 278 (429)
T 3kvw_A 238 RSGIKVIDFGSSCYEHQR-------VYTYIQSRFYRAPEVILGARYGM 278 (429)
T ss_dssp SCCEEECCCTTCEETTCC-------CCSSCSCGGGCCHHHHHTBCCCT
T ss_pred CcceEEeecccceecCCc-------ccccCCCCCccChHHHhCCCCCc
Confidence 7 999999999754321 12346899999999999888765
No 268
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.94 E-value=1.9e-27 Score=240.82 Aligned_cols=183 Identities=25% Similarity=0.388 Sum_probs=145.9
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
...++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++.++|++++..+++|. .....
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~ 79 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDY 79 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEE----EETTE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeec----CCCCc
Confidence 345789999999999999999999988999999998754332 235788999999999999888887763 34567
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee---CCCCc
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL---DNDMI 594 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl---~~~~~ 594 (640)
.++||||+ +|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||++ ++++.
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~~---------~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~ 146 (296)
T 4hgt_A 80 NVMVMELL-GPSLEDLFNFCS---------RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNL 146 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHTT---------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTC
T ss_pred eEEEEEcc-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCe
Confidence 89999999 999999986432 238899999999999999999999 699999999999999 78899
Q ss_pred EEEccccccccCCCccCCC---ceeeccccccccccCcccCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSN---QCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+||+|||+++......... ........||+.|+|||++.+..++.
T Consensus 147 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 194 (296)
T 4hgt_A 147 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSR 194 (296)
T ss_dssp EEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCH
T ss_pred EEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCc
Confidence 9999999998764432211 11223456999999999999887764
No 269
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.94 E-value=7.4e-28 Score=248.38 Aligned_cols=195 Identities=25% Similarity=0.336 Sum_probs=151.8
Q ss_pred HHHHhcCCCcccCcccccccceEEEEEECCCCe-----EEEEEEeeccc-chhHHHHHHHHHHHHhc-CCCCCcceeEee
Q 035691 435 SLLKATGGFSSANLIGTGSFGSVYKGILDPDQT-----VVAVKVLFLHQ-RGALKSFMAECEALRNI-RHRNLVKIITAC 507 (640)
Q Consensus 435 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~ 507 (640)
+.....++|++.+.||+|+||.||+|++..+++ .||+|++.... ....+.+.+|+.+++.+ +||||++++++|
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344556789999999999999999999876554 79999996543 33457899999999999 899999999996
Q ss_pred ccCCcCCCceeeEEeeccCCCChhhhcCCCCCC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCC
Q 035691 508 SSSDFQGNDFKALVYEFMHHGSLESWLHPESAS----DDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLK 583 (640)
Q Consensus 508 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlk 583 (640)
. .....++||||+++|+|.+++...... .........+++..++.++.|++.||+|||+ .+|+|||||
T Consensus 120 ~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlk 191 (333)
T 2i1m_A 120 T-----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVA 191 (333)
T ss_dssp C-----SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCS
T ss_pred e-----cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcc
Confidence 4 344689999999999999998642110 0000011347889999999999999999999 699999999
Q ss_pred CCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 584 PSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 584 p~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.
T Consensus 192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~ 245 (333)
T 2i1m_A 192 ARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARLPVKWMAPESIFDCVYTV 245 (333)
T ss_dssp GGGCEEEGGGEEEBCCCGGGCCGGGCTT--SEECSSCEECGGGSCHHHHHHCCCCH
T ss_pred cceEEECCCCeEEECccccccccccccc--eeecCCCCCCccccCHHHhccCCCCh
Confidence 9999999999999999999986543221 11222345788999999987766653
No 270
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.94 E-value=5.1e-27 Score=238.84 Aligned_cols=180 Identities=23% Similarity=0.378 Sum_probs=145.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc----chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ----RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EEK 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C--
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CCC
Confidence 468999999999999999999999899999999996432 2345789999999999999999999999643 234
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
...++||||+++| +.+++..... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~--------~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~ 148 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPE--------KRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTL 148 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTT--------CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCE
T ss_pred CeEEEEehhccCC-HHHHHHhCcc--------cccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcE
Confidence 5689999999987 6666643322 238889999999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ 636 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 636 (640)
||+|||+++........ .......||+.|+|||++.+..
T Consensus 149 kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~ 187 (305)
T 2wtk_C 149 KISALGVAEALHPFAAD--DTCRTSQGSPAFQPPEIANGLD 187 (305)
T ss_dssp EECCCTTCEECCTTCSS--CEECCCCSCGGGCCHHHHTCCS
T ss_pred EeeccccccccCccccc--cccccCCCCCCCcChhhccCcc
Confidence 99999999866432221 1223346899999999987643
No 271
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.94 E-value=1.6e-27 Score=238.01 Aligned_cols=173 Identities=23% Similarity=0.348 Sum_probs=145.0
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|++.+.||+|+||.||+|++. ++.||||++.... ....+.+.+|+.++++++||||+++++++.... ....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~ 84 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP---APHP 84 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT---SSSC
T ss_pred HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC---CCCe
Confidence 46888999999999999999984 8899999996543 334568999999999999999999999975432 3567
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeeCCCCCCCeeeCCCCcEE
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQ--IVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~--ivHrdlkp~NiLl~~~~~~k 596 (640)
++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+|
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~ 153 (271)
T 3kmu_A 85 TLITHWMPYGSLYNVLHEGTN--------FVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTAR 153 (271)
T ss_dssp EEEEECCTTCBHHHHHHSCSS--------CCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEE
T ss_pred EeeecccCCCcHHHHHhhccc--------CCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCccee
Confidence 899999999999999975432 238899999999999999999998 57 99999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
|+|||++..... ....||+.|+|||++.+..++
T Consensus 154 l~~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~~ 186 (271)
T 3kmu_A 154 ISMADVKFSFQS---------PGRMYAPAWVAPEALQKKPED 186 (271)
T ss_dssp EEGGGSCCTTSC---------TTCBSCGGGSCHHHHHSCGGG
T ss_pred EEeccceeeecc---------cCccCCccccChhhhccCCCC
Confidence 999988764321 123589999999999876544
No 272
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.94 E-value=1.5e-27 Score=242.08 Aligned_cols=175 Identities=26% Similarity=0.449 Sum_probs=143.9
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|+..+.||+|+||.||+|+++.+|+.||||++.... ....+.+.+|+.++++++||||+++++++. ..+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEe-----cCCce
Confidence 57888999999999999999999899999999986443 223467889999999999999999999964 34578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEc
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVG 598 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~ 598 (640)
++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~ 145 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASAL--------TGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLA 145 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTTT--------TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEEC
T ss_pred EEEEEccc-CCHHHHHHhhhc--------cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEEC
Confidence 99999998 599998865432 237888999999999999999999 699999999999999999999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ 636 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 636 (640)
|||+++....... ......||+.|+|||++.+..
T Consensus 146 dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~ 179 (299)
T 2r3i_A 146 DFGLARAFGVPVR----TYTHEVVTLWYRAPEILLGAK 179 (299)
T ss_dssp STTHHHHHCCCSB----CTTSCBCCCTTCCHHHHTTCS
T ss_pred cchhhhhccCCcc----ccCcccccccccCcHHhhccc
Confidence 9999986532211 112245899999999998765
No 273
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.94 E-value=8.3e-28 Score=241.72 Aligned_cols=179 Identities=24% Similarity=0.393 Sum_probs=143.5
Q ss_pred cCCCcccCcccccccceEEEEEECC---CCeEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDP---DQTVVAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
.++|.+.+.||+|+||.||+|++.. ++..||+|++... .....+.+.+|+.+++.++||||+++++++..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE------ 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS------
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC------
Confidence 4568888999999999999998653 3456999998654 23445789999999999999999999998532
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
...++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+
T Consensus 85 ~~~~~v~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~ 152 (281)
T 3cc6_A 85 EPTWIIMELYPYGELGHYLERNK---------NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECV 152 (281)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHT---------TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEE
T ss_pred CCCEEEEecCCCCCHHHHHHhcc---------ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcE
Confidence 23589999999999999986432 237888999999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+|||+++....... .......+|+.|+|||++.+..++.
T Consensus 153 kl~Dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~ 193 (281)
T 3cc6_A 153 KLGDFGLSRYIEDEDY---YKASVTRLPIKWMSPESINFRRFTT 193 (281)
T ss_dssp EECCCCGGGCC------------CCCCCGGGCCHHHHHHCCCCH
T ss_pred EeCccCCCcccccccc---cccccCCCCcceeCchhhccCCCCc
Confidence 9999999986643221 1122345788999999987776653
No 274
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.94 E-value=9.8e-28 Score=248.48 Aligned_cols=173 Identities=24% Similarity=0.369 Sum_probs=138.9
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCC--CCCcceeEeeccCCcCC
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRH--RNLVKIITACSSSDFQG 514 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~ 514 (640)
..+.|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++.++| |||+++++++. .
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-----~ 80 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----T 80 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----C
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe-----e
Confidence 3456889999999999999999985 78999999996443 3345788999999999976 99999999954 4
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
....++||| +.+|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+|||++ ++.
T Consensus 81 ~~~~~lv~e-~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~ 145 (343)
T 3dbq_A 81 DQYIYMVME-CGNIDLNSWLKKKK----------SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGM 145 (343)
T ss_dssp SSEEEEEEC-CCSEEHHHHHHHSC----------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTE
T ss_pred CCEEEEEEe-CCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCc
Confidence 457899999 56789999986532 27888999999999999999999 6999999999999997 678
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
+||+|||+++.+...... ......+||+.|+|||++.+
T Consensus 146 ~kl~DFG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~ 183 (343)
T 3dbq_A 146 LKLIDFGIANQMQPDTTS--VVKDSQVGTVNYMPPEAIKD 183 (343)
T ss_dssp EEECCCSSSCCC--------------CCCCSSCCHHHHHH
T ss_pred EEEeecccccccCccccc--ccCCCCcCCcCcCCHHHHhh
Confidence 999999999876432211 11224569999999999864
No 275
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.94 E-value=1.9e-27 Score=240.10 Aligned_cols=173 Identities=32% Similarity=0.475 Sum_probs=134.0
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
...++|++.+.||+|+||.||+|++. ..||||+++... ....+.+.+|++++++++||||+++++++. .
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~ 91 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST------A 91 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------S
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc------C
Confidence 34567999999999999999999864 359999996443 344578999999999999999999999742 2
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
...++||||+++++|.+++.... ..+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~ 159 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHASE---------TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTV 159 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTTC------------CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEE
T ss_pred CccEEEEEecCCCcHHHHHhhcc---------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCE
Confidence 34789999999999999986443 238889999999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
||+|||+++........ .......||+.|+|||++.
T Consensus 160 kl~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~ 195 (289)
T 3og7_A 160 KIGDFGLATEKSRWSGS--HQFEQLSGSILWMAPEVIR 195 (289)
T ss_dssp EECCCC--------------------CCCTTCCHHHHC
T ss_pred EEccceecccccccccc--ccccccCCCccccCchhhc
Confidence 99999999865432111 1122346899999999986
No 276
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.94 E-value=1.4e-27 Score=245.15 Aligned_cols=170 Identities=26% Similarity=0.329 Sum_probs=138.9
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--------chhHHHHHHHHHHHHhcCCCCCcceeEeeccCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--------RGALKSFMAECEALRNIRHRNLVKIITACSSSD 511 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 511 (640)
.++|.+.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 86 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 86 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--
Confidence 346889999999999999999999999999999985432 1223458899999999999999999998632
Q ss_pred cCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC
Q 035691 512 FQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN 591 (640)
Q Consensus 512 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~ 591 (640)
+ ..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.
T Consensus 87 ---~-~~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~ 149 (322)
T 2ycf_A 87 ---E-DYYIVLELMEGGELFDKVVGNK----------RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSS 149 (322)
T ss_dssp ---S-SEEEEEECCTTEETHHHHSTTC----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESS
T ss_pred ---C-ceEEEEecCCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEec
Confidence 2 3789999999999999886432 37888999999999999999999 69999999999999987
Q ss_pred CCc---EEEccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 592 DMI---AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 592 ~~~---~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
++. +||+|||+++..... .......||+.|+|||++.
T Consensus 150 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~gt~~y~aPE~~~ 189 (322)
T 2ycf_A 150 QEEDCLIKITDFGHSKILGET-----SLMRTLCGTPTYLAPEVLV 189 (322)
T ss_dssp SSSSCCEEECCCTTCEECCCC-----HHHHHHHSCCTTCCHHHHH
T ss_pred CCCCCeEEEccCccceecccc-----cccccccCCcCccCchhhc
Confidence 654 999999999865421 1112346899999999973
No 277
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.94 E-value=3.1e-27 Score=239.32 Aligned_cols=181 Identities=25% Similarity=0.387 Sum_probs=148.6
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|++..+|+.||||++..... .+.+.+|+.+++.++|++++..++++. ......+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEE----EETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCcccccc----CCCCceE
Confidence 5679999999999999999999988999999999864432 246889999999999998888777763 3345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee---CCCCcEE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL---DNDMIAH 596 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl---~~~~~~k 596 (640)
+||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+|
T Consensus 82 lv~e~~-~~~L~~~~~~~~---------~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~k 148 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCS---------RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVY 148 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT---------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEE
T ss_pred EEEEec-CCCHHHHHHhhc---------cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEE
Confidence 999999 899999986332 238899999999999999999999 699999999999999 4888999
Q ss_pred EccccccccCCCccCCC---ceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSN---QCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++......... ........||+.|+|||++.+..++.
T Consensus 149 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 194 (296)
T 3uzp_A 149 IIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSR 194 (296)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCH
T ss_pred EeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCc
Confidence 99999998765432211 01123456999999999999887764
No 278
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.94 E-value=5.2e-27 Score=244.77 Aligned_cols=190 Identities=21% Similarity=0.268 Sum_probs=136.8
Q ss_pred HHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc-
Q 035691 434 ESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDF- 512 (640)
Q Consensus 434 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~- 512 (640)
++.....++|++.+.||+|+||.||+|++..+|+.||||++.... .....+.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445667789999999999999999999999899999999985432 233466788888999999999999999754322
Q ss_pred -CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCeeeCCCCCCCeee
Q 035691 513 -QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLH--HHCKKQIVHCDLKPSNVLL 589 (640)
Q Consensus 513 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH--~~~~~~ivHrdlkp~NiLl 589 (640)
....+.++||||++++ +.+.+..... ....+++..+..++.|++.|+.||| + .+|+||||||+||++
T Consensus 95 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~------~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll 164 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDT-LHRCCRNYYR------RQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLV 164 (360)
T ss_dssp CTTCEEEEEEEECCSCB-HHHHHHHHHT------TTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEE
T ss_pred cccceeEEEEeeccccc-HHHHHHHHhh------cccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEE
Confidence 2233478999999874 4333321000 0123788899999999999999999 6 799999999999999
Q ss_pred CC-CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCC-CCC
Q 035691 590 DN-DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ-VST 639 (640)
Q Consensus 590 ~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ 639 (640)
+. ++.+||+|||+++.+.... ......||+.|+|||++.+.. ++.
T Consensus 165 ~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~ 211 (360)
T 3e3p_A 165 NEADGTLKLCDFGSAKKLSPSE-----PNVAYICSRYYRAPELIFGNQHYTT 211 (360)
T ss_dssp ETTTTEEEECCCTTCBCCCTTS-----CCCSTTSCGGGCCHHHHTTCSSCCT
T ss_pred eCCCCcEEEeeCCCceecCCCC-----CcccccCCcceeCHHHHcCCCCCCc
Confidence 96 8999999999998764322 122346899999999987655 443
No 279
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.94 E-value=1.1e-27 Score=254.67 Aligned_cols=179 Identities=26% Similarity=0.382 Sum_probs=139.3
Q ss_pred CCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc-CCCceeeE
Q 035691 442 GFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDF-QGNDFKAL 520 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~~~~~~l 520 (640)
+|+..+.||+|+||.||+|++..+|+.||||++..... .+.+|+++++.++|||||++++++..... .+..+.++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 57888999999999999999998999999999854322 23479999999999999999998754321 22345779
Q ss_pred EeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC-CcEEEcc
Q 035691 521 VYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND-MIAHVGD 599 (640)
Q Consensus 521 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~-~~~kl~D 599 (640)
||||+++ ++.+.+...... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.+ +.+||+|
T Consensus 131 v~e~~~~-~l~~~~~~~~~~------~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~D 200 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRA------KQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCD 200 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECC
T ss_pred ehhcccc-cHHHHHHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEecc
Confidence 9999986 555554321100 1238889999999999999999999 699999999999999955 6789999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCC-CCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS-QVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ 639 (640)
||+|+.+.... .....+||++|+|||++.+. .++.
T Consensus 201 FG~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~ 236 (420)
T 1j1b_A 201 FGSAKQLVRGE-----PNVSYICSRYYRAPELIFGATDYTS 236 (420)
T ss_dssp CTTCEECCTTC-----CCCSCCSCTTSCCHHHHTTCSSCCT
T ss_pred chhhhhcccCC-----CceeeeeCCCcCCHHHHcCCCCCCc
Confidence 99998654321 12235689999999999775 4543
No 280
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.94 E-value=1.4e-27 Score=244.53 Aligned_cols=178 Identities=29% Similarity=0.420 Sum_probs=144.7
Q ss_pred CcccCcccccccceEEEEEE----CCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 443 FSSANLIGTGSFGSVYKGIL----DPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 443 ~~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
|++.+.||+|+||.||+|.+ ..+++.||||++.... ....+.+.+|++++++++||||+++++++... +...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA---GAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---TTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---CCce
Confidence 37889999999999988864 3578999999996543 34457899999999999999999999997543 2457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~-----------~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl 175 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH-----------SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKI 175 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS-----------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecccCCcHHHHHhhC-----------CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEE
Confidence 89999999999999998643 27888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
+|||+++....... .........||+.|+|||++.+..++
T Consensus 176 ~Dfg~a~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~ 215 (318)
T 3lxp_A 176 GDFGLAKAVPEGHE-YYRVREDGDSPVFWYAPECLKEYKFY 215 (318)
T ss_dssp CCGGGCEECCTTCS-EEEC---CCCCGGGCCHHHHHHCEEE
T ss_pred CCcccccccccccc-ccccccCCCCCceeeChHHhcCCCCC
Confidence 99999987643221 11122334588999999998776654
No 281
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.94 E-value=5.5e-27 Score=243.36 Aligned_cols=179 Identities=20% Similarity=0.311 Sum_probs=145.6
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchh-----------------HHHHHHHHHHHHhcCCCCCcc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGA-----------------LKSFMAECEALRNIRHRNLVK 502 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~ 502 (640)
.++|++.+.||+|+||.||+|++ +|+.||||++....... .+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46789999999999999999998 89999999996432211 178999999999999999999
Q ss_pred eeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 035691 503 IITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDL 582 (640)
Q Consensus 503 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdl 582 (640)
+++++. ..+..++||||+++|+|.+++........ .....+++..++.++.|++.||.|||+. .+|+||||
T Consensus 108 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dl 178 (348)
T 2pml_X 108 CEGIIT-----NYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDV 178 (348)
T ss_dssp CSEEEE-----SSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCCC
T ss_pred EEEEEe-----eCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecCC
Confidence 999964 34578999999999999998331100000 0013488999999999999999999972 49999999
Q ss_pred CCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 583 KPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 583 kp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
||+||+++.++.+||+|||.++..... ......||+.|+|||++.+.
T Consensus 179 ~p~Nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~ 225 (348)
T 2pml_X 179 KPSNILMDKNGRVKLSDFGESEYMVDK------KIKGSRGTYEFMPPEFFSNE 225 (348)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECBTT------EECSSCSCGGGCCGGGGSSC
T ss_pred ChHhEEEcCCCcEEEeccccccccccc------cccCCCCCcCccCchhhcCC
Confidence 999999999999999999999865332 22335689999999999877
No 282
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.94 E-value=1.1e-27 Score=266.96 Aligned_cols=173 Identities=26% Similarity=0.373 Sum_probs=138.4
Q ss_pred CcccccccceEEEEEE--CCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceeeEEe
Q 035691 447 NLIGTGSFGSVYKGIL--DPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKALVY 522 (640)
Q Consensus 447 ~~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~lv~ 522 (640)
+.||+|+||.||+|.+ +.+++.||||+++... ....+.+.+|+++|++++|||||+++++|.. +..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence 4799999999999965 4567899999996433 3345789999999999999999999999732 2468999
Q ss_pred eccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEccccc
Q 035691 523 EFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGDFGL 602 (640)
Q Consensus 523 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~DfGl 602 (640)
|||++|+|.+++.... .+++..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 449 E~~~~g~L~~~l~~~~----------~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGl 515 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR----------HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGL 515 (635)
T ss_dssp ECCTTEEHHHHHHHCT----------TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTH
T ss_pred EccCCCCHHHHHhhCC----------CCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCC
Confidence 9999999999996432 37889999999999999999999 6999999999999999999999999999
Q ss_pred cccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 603 TRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 603 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+.+...... ........||+.|+|||++.+..++.
T Consensus 516 a~~~~~~~~~-~~~~~~~~~t~~y~APE~~~~~~~~~ 551 (635)
T 4fl3_A 516 SKALRADENY-YKAQTHGKWPVKWYAPECINYYKFSS 551 (635)
T ss_dssp HHHTTC--------------CGGGSCHHHHHHCCCCH
T ss_pred ccccccCccc-cccccCCCCceeeeChhhhcCCCCCc
Confidence 9876432211 11122345788999999998877764
No 283
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.94 E-value=1.1e-27 Score=246.34 Aligned_cols=185 Identities=28% Similarity=0.421 Sum_probs=143.6
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEE--EEEEeecc-cchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCc
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVV--AVKVLFLH-QRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~ 516 (640)
++|++.+.||+|+||.||+|++..++..+ |+|.+... .....+.+.+|+++++++ +||||+++++++. ...
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE-----ETT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeee-----eCC
Confidence 46888899999999999999998888765 89988643 233446789999999999 8999999999963 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCC------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeC
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDD------LNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLD 590 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~ 590 (640)
..++||||+++|+|.+++........ .......+++..++.++.|++.||+|||+ .+|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEc
Confidence 78999999999999999975431000 00001348899999999999999999999 6999999999999999
Q ss_pred CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 591 NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 591 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
.++.+||+|||+++...... ......+|+.|+|||++.+..++
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~ 219 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV-----KKTMGRLPVRWMAIESLNYSVYT 219 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC-----CC----CCTTTCCHHHHHHCEEC
T ss_pred CCCeEEEcccCcCccccccc-----cccCCCCCccccChhhhccccCC
Confidence 99999999999998543211 11223478899999998766554
No 284
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.1e-27 Score=239.50 Aligned_cols=179 Identities=27% Similarity=0.379 Sum_probs=144.5
Q ss_pred CCCcccC-cccccccceEEEEEEC--CCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 441 GGFSSAN-LIGTGSFGSVYKGILD--PDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 441 ~~~~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
++|.+.+ .||+|+||.||+|.++ .++..||||+++... ....+.+.+|++++++++||||+++++++. .+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------AE 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------SS
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------CC
Confidence 4455555 8999999999999864 467889999996543 345578999999999999999999999962 23
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~k 150 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKR---------EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAK 150 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCT---------TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEE
T ss_pred CcEEEEEeCCCCCHHHHHHhCC---------ccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEE
Confidence 5789999999999999986432 238899999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
|+|||+++........ ........||+.|+|||++.+..++
T Consensus 151 l~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~ 191 (287)
T 1u59_A 151 ISDFGLSKALGADDSY-YTARSAGKWPLKWYAPECINFRKFS 191 (287)
T ss_dssp ECCCTTCEECTTCSCE-ECCCCSSCCCGGGCCHHHHHHCEEC
T ss_pred ECcccceeeeccCcce-eeccccccccccccCHHHhccCCCC
Confidence 9999999876432211 1112233578999999998766554
No 285
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.94 E-value=3.1e-27 Score=242.92 Aligned_cols=185 Identities=26% Similarity=0.409 Sum_probs=148.9
Q ss_pred HhcCCCcccCcccccccceEEEEEEC-CCCeEEEEEEeecccc--hhHHHHHHHHHHHHhc---CCCCCcceeEeeccCC
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILD-PDQTVVAVKVLFLHQR--GALKSFMAECEALRNI---RHRNLVKIITACSSSD 511 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~ 511 (640)
...++|++.+.||+|+||.||+|++. .+|+.||||++..... .....+.+|+.+++.+ +||||++++++|....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 34577999999999999999999995 6789999999964332 2234566787777766 8999999999975433
Q ss_pred cCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC
Q 035691 512 FQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN 591 (640)
Q Consensus 512 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~ 591 (640)
.......++||||++ |+|.+++..... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~ 155 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPE--------PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTS 155 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCT--------TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECT
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhccc--------CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcC
Confidence 334567899999998 699998865432 237889999999999999999999 69999999999999999
Q ss_pred CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 592 DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 592 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
++.+||+|||+++...... ......||+.|+|||++.+..++.
T Consensus 156 ~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~ 198 (326)
T 1blx_A 156 SGQIKLADFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQSSYAT 198 (326)
T ss_dssp TCCEEECSCCSCCCCCGGG-----GGCCCCCCCTTCCHHHHTTCCCCT
T ss_pred CCCEEEecCcccccccCCC-----CccccccccceeCHHHHhcCCCCc
Confidence 9999999999998654221 122356899999999998887765
No 286
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.94 E-value=9.3e-29 Score=259.60 Aligned_cols=181 Identities=18% Similarity=0.231 Sum_probs=137.2
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc---cchhHHHHHHHH---HHHHhcCCCCCcceeE-------e
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH---QRGALKSFMAEC---EALRNIRHRNLVKIIT-------A 506 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~~-------~ 506 (640)
.++|++.+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+ +++++++|||||++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45688889999999999999999889999999999633 334557899999 4555568999999984 3
Q ss_pred eccCC-------cCCCc-----eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 035691 507 CSSSD-------FQGND-----FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCK 574 (640)
Q Consensus 507 ~~~~~-------~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~ 574 (640)
+.... +.++. ..++||||+ +|+|.+++....... .....+++..++.|+.|++.||+|||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~--- 224 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS---STHKSLVHHARLQLTLQVIRLLASLHH--- 224 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTT---TTTHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccc---cccccccHHHHHHHHHHHHHHHHHHHh---
Confidence 32211 00111 268999999 689999986432110 001234567888999999999999999
Q ss_pred CCeeeCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 575 KQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 575 ~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
.+|+||||||+|||++.++.+||+|||+|+.... .....+| +.|+|||++.+.
T Consensus 225 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-------~~~~~~g-~~y~aPE~~~~~ 277 (377)
T 3byv_A 225 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-------RVVSSVS-RGFEPPELEARR 277 (377)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCGGGCEETTC-------EEECCCC-TTCCCHHHHHHH
T ss_pred CCeecCCCCHHHEEEcCCCCEEEEechhheecCC-------cccCCCC-cCccChhhhccc
Confidence 6999999999999999999999999999985322 2223467 999999998766
No 287
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.94 E-value=5.2e-27 Score=245.68 Aligned_cols=177 Identities=25% Similarity=0.310 Sum_probs=142.9
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcC-CCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQ-GND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~~~ 516 (640)
.++|...+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...... ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46788899999999999999999999999999999643 233457889999999999999999999997544321 111
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||+. |+|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~k 184 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------------EFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELK 184 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEE
T ss_pred eEEEEEcccc-ccHHHHhhc------------CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEE
Confidence 3489999998 588887631 27889999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCC-CCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG-SQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ 639 (640)
|+|||+++..... .....||+.|+|||++.+ ..++.
T Consensus 185 L~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~ 221 (371)
T 4exu_A 185 ILDFGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQ 221 (371)
T ss_dssp ECSTTCC---------------CTTCCCTTSCHHHHSCCSCCCT
T ss_pred EEecCcccccccC-------cCCcccCccccCHHHhcCCCCCCc
Confidence 9999999865321 223468999999999987 55554
No 288
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.94 E-value=6.4e-28 Score=243.85 Aligned_cols=180 Identities=25% Similarity=0.347 Sum_probs=143.3
Q ss_pred hcCCCcccC-cccccccceEEEEEE--CCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcC
Q 035691 439 ATGGFSSAN-LIGTGSFGSVYKGIL--DPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQ 513 (640)
Q Consensus 439 ~~~~~~~~~-~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 513 (640)
..++|.+.+ .||+|+||.||+|.+ ..+++.||||++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 88 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE----- 88 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-----
Confidence 345677777 999999999999954 5667899999996443 233578999999999999999999999962
Q ss_pred CCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCC
Q 035691 514 GNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDM 593 (640)
Q Consensus 514 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~ 593 (640)
.+..++||||+++|+|.+++.... .+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 89 -~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~ 154 (291)
T 1xbb_A 89 -AESWMLVMEMAELGPLNKYLQQNR----------HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQH 154 (291)
T ss_dssp -SSSEEEEEECCTTEEHHHHHHHCT----------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETT
T ss_pred -CCCcEEEEEeCCCCCHHHHHHhCc----------CCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCC
Confidence 235789999999999999996532 27888999999999999999999 6999999999999999999
Q ss_pred cEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 594 IAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 594 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
.+||+|||+++........ ........||+.|+|||++.+..++
T Consensus 155 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~ 198 (291)
T 1xbb_A 155 YAKISDFGLSKALRADENY-YKAQTHGKWPVKWYAPECINYYKFS 198 (291)
T ss_dssp EEEECCCTTCEECCTTCSE-EEC----CCCGGGCCHHHHHHCEEE
T ss_pred cEEEccCCcceeeccCCCc-ccccccCCCCceeeChHHhccCCCC
Confidence 9999999999876432211 1112223467899999998766554
No 289
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.94 E-value=6.1e-28 Score=264.51 Aligned_cols=180 Identities=28% Similarity=0.483 Sum_probs=147.7
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
...++|++.+.||+|+||.||+|++. .+..||||+++... ...+.|.+|+++|++++|||||+++++|.. ..
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~ 335 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EP 335 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SS
T ss_pred cchhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee------cc
Confidence 34566788899999999999999997 46779999996543 234789999999999999999999999632 35
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.++|||||++|+|.+++..... ..+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 336 ~~lv~e~~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl 404 (535)
T 2h8h_A 336 IYIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKV 404 (535)
T ss_dssp CEEEECCCTTEEHHHHHSHHHH--------TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred ceEeeehhcCCcHHHHHhhcCC--------CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEE
Confidence 7899999999999999964321 237888999999999999999999 69999999999999999999999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+|||+++.+.... ........++..|+|||++.+..++.
T Consensus 405 ~DFG~a~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~ 443 (535)
T 2h8h_A 405 ADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTI 443 (535)
T ss_dssp CCTTSTTTCCCHH---HHTTCSTTSCGGGSCHHHHHHCCCCH
T ss_pred cccccceecCCCc---eecccCCcCcccccCHHHhccCCCCc
Confidence 9999998664321 11112234788999999998777664
No 290
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.94 E-value=2.1e-27 Score=250.13 Aligned_cols=171 Identities=23% Similarity=0.365 Sum_probs=138.5
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcC--CCCCcceeEeeccCCcCCCc
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIR--HRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~~~ 516 (640)
..|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++ |||||++++++. ...
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~-----~~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----TDQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSS
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe-----cCC
Confidence 35888999999999999999987 49999999996443 344578999999999996 599999999964 344
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||| +.+|+|.+++.... .+++..+..++.||+.||.|||+ .+|+||||||+|||++ ++.+|
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~k 194 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKK----------SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLK 194 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCS----------SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEE
T ss_pred EEEEEEe-cCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEE
Confidence 7899999 56889999986543 27788899999999999999999 6999999999999995 58999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
|+|||+++.+..... .......+||+.|+|||++.+
T Consensus 195 l~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~ 230 (390)
T 2zmd_A 195 LIDFGIANQMQPDTT--SVVKDSQVGAVNYMPPEAIKD 230 (390)
T ss_dssp ECCCSSSCCC-----------CCSCCCGGGCCHHHHHC
T ss_pred EEecCccccccCCCc--cccCCCCCcCCCccChHHhhh
Confidence 999999987643221 111234569999999999875
No 291
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.94 E-value=6.3e-27 Score=242.29 Aligned_cols=182 Identities=27% Similarity=0.363 Sum_probs=145.5
Q ss_pred HHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHh--cCCCCCcceeEeeccCCcCC
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRN--IRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~~~~ 514 (640)
....++|++.+.||+|+||.||+|++ +|+.||||++... ..+.+.+|++++.. ++||||+++++++.... ..
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~~ 111 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GT 111 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-SS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-Cc
Confidence 34456799999999999999999998 5899999998543 33567889998887 78999999999975432 11
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeeCCCCCCCeee
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHC-----KKQIVHCDLKPSNVLL 589 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~-----~~~ivHrdlkp~NiLl 589 (640)
....++||||+++|+|.+++... .+++..++.++.|++.||.|||... ..+|+||||||+||++
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNRY-----------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 180 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE
T ss_pred cceeEEEEeecCCCcHHHHHhcc-----------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE
Confidence 23689999999999999999532 2788999999999999999999210 1699999999999999
Q ss_pred CCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 590 DNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 590 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
+.++.+||+|||+++.................||+.|+|||++.+.
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 226 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhccc
Confidence 9999999999999986543221111122345699999999999775
No 292
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.94 E-value=1.8e-27 Score=244.79 Aligned_cols=187 Identities=27% Similarity=0.389 Sum_probs=142.8
Q ss_pred cCCCcccCcccccccceEEEEE-----ECCCCeEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGI-----LDPDQTVVAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQ 513 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 513 (640)
.++|++.+.||+|+||.||+|+ ...+++.||||++... .......+.+|+.++++++||||+++++++.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 103 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL----- 103 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc-----
Confidence 4568899999999999999998 4457889999999543 3344567899999999999999999999964
Q ss_pred CCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC--
Q 035691 514 GNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN-- 591 (640)
Q Consensus 514 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~-- 591 (640)
.....++||||+++|+|.+++....... .....+++..++.++.|++.||.|||+ .+|+||||||+||+++.
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPRP---SQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCCS---SSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSS
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhcccc---cccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCC
Confidence 3446799999999999999997543211 112348899999999999999999999 69999999999999984
Q ss_pred -CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 592 -DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 592 -~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+..+||+|||+++....... ........||+.|+|||++.+..++.
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~ 224 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASY--YRKGGCAMLPVKWMPPEAFMEGIFTS 224 (327)
T ss_dssp TTCCEEECCCHHHHHHHC--------CCGGGSCGGGCCHHHHHHCCCCH
T ss_pred CcceEEECccccccccccccc--cccCCCcCCCcceeCHhHhcCCCCCc
Confidence 44699999999975432211 11122345789999999987776653
No 293
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.3e-27 Score=262.48 Aligned_cols=163 Identities=15% Similarity=0.041 Sum_probs=124.0
Q ss_pred cccccccceEEEEEECCCCeEEEEEEeeccc----------chhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCc
Q 035691 448 LIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ----------RGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 448 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~ 516 (640)
..+.|++|.+..++....|+.||||++.... +...++|.+|+++|+++ .|+||++++++ ++++.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH-----GENAQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE-----EECSS
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE-----EEECC
Confidence 3566777777776666678999999995431 23346799999999999 79999999999 45566
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..||||||++||+|.+++..... ++. .+|+.||+.||+|+|+ .+||||||||+|||++++|.+|
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~~----------l~~---~~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vK 379 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGEE----------IDR---EKILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHAR 379 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTCC----------CCH---HHHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHhCCC----------CCH---HHHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEE
Confidence 89999999999999999976543 343 3589999999999999 7999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
|+|||+|+...... ....+.+||+.|||||++.|.
T Consensus 380 L~DFGlAr~~~~~~----~~~~t~vGTp~YmAPE~l~g~ 414 (569)
T 4azs_A 380 LIDFGSIVTTPQDC----SWPTNLVQSFFVFVNELFAEN 414 (569)
T ss_dssp ECCCTTEESCC-------CCSHHHHHHHHHHHHHHC---
T ss_pred EeecccCeeCCCCC----ccccCceechhhccHHHhCCC
Confidence 99999998764322 223456799999999999774
No 294
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.94 E-value=9e-28 Score=244.11 Aligned_cols=188 Identities=24% Similarity=0.332 Sum_probs=128.6
Q ss_pred HHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
....++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 85 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-----K 85 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-----S
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-----c
Confidence 345678999999999999999999998889999999986443 3345678899999999999999999999643 4
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
+..++||||+++|+|.+++........ .....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~ 160 (303)
T 2vwi_A 86 DELWLVMKLLSGGSVLDIIKHIVAKGE--HKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSV 160 (303)
T ss_dssp SCEEEEEECCTTCBHHHHHHHHHHTTT--TTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCE
T ss_pred CCcEEEehhccCCchHHHHHHHhhccc--cccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCE
Confidence 468999999999999998853111000 011348899999999999999999999 699999999999999999999
Q ss_pred EEccccccccCCCccCC-CceeeccccccccccCcccCCC
Q 035691 596 HVGDFGLTRFIPEVISS-NQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
||+|||+++........ .........||+.|+|||++.+
T Consensus 161 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 200 (303)
T 2vwi_A 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ 200 (303)
T ss_dssp EECCCHHHHHCC---------------CCCTTCCHHHHHH
T ss_pred EEEeccchheeccCCCccchhhhcccCCCccccCHHHhcc
Confidence 99999999865432111 1111223568999999998754
No 295
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.94 E-value=6.3e-27 Score=251.86 Aligned_cols=181 Identities=25% Similarity=0.347 Sum_probs=145.5
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|++..+++.||||++...... ..+..|+++++.++|++++..+.++ .......+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~----~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWF----GVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEE----EEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEE----EeeCCEEE
Confidence 46799999999999999999999989999999988644322 3578999999999875555444443 23345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee---CCCCcEE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL---DNDMIAH 596 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl---~~~~~~k 596 (640)
+||||+ +++|.+++.... ..+++..++.|+.||+.||+|||+ .+|+||||||+|||+ +.++.+|
T Consensus 80 lvme~~-g~sL~~ll~~~~---------~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vk 146 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCS---------RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVY 146 (483)
T ss_dssp EEEECC-CCBHHHHHHHTT---------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEE
T ss_pred EEEECC-CCCHHHHHHhhc---------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEE
Confidence 999999 999999986432 238899999999999999999999 699999999999999 6889999
Q ss_pred EccccccccCCCccCCC---ceeeccccccccccCcccCCCCCCCC
Q 035691 597 VGDFGLTRFIPEVISSN---QCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+|||+++.+....... ........||+.|+|||++.+..++.
T Consensus 147 L~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ 192 (483)
T 3sv0_A 147 IIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSR 192 (483)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCH
T ss_pred EEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCCh
Confidence 99999998765432211 11223467999999999999887764
No 296
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.94 E-value=3.8e-27 Score=249.16 Aligned_cols=179 Identities=23% Similarity=0.341 Sum_probs=145.7
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC--------CCCCcceeEeeccCC
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR--------HRNLVKIITACSSSD 511 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~~~~ 511 (640)
.++|++.+.||+|+||+||+|++..+++.||||++... ....+.+.+|+++++.++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46799999999999999999999999999999999643 334567899999999986 788999999864321
Q ss_pred cCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeeCCCCCCCeeeC
Q 035691 512 FQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKK-QIVHCDLKPSNVLLD 590 (640)
Q Consensus 512 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~-~ivHrdlkp~NiLl~ 590 (640)
......++||||+ +|++.+++..... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~~~~--------~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~ 181 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIKSNY--------QGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLS 181 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHHTTT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEEC
T ss_pred -CCCceEEEEEecc-CccHHHHHHhccc--------CCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEe
Confidence 2345789999999 5566665543221 238899999999999999999999 6 999999999999999
Q ss_pred CCC-------------------------------------------------cEEEccccccccCCCccCCCceeecccc
Q 035691 591 NDM-------------------------------------------------IAHVGDFGLTRFIPEVISSNQCSSVGLK 621 (640)
Q Consensus 591 ~~~-------------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~ 621 (640)
.++ .+||+|||+|+..... ....+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-------~~~~~ 254 (397)
T 1wak_A 182 VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-------FTEDI 254 (397)
T ss_dssp CCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-------SCSCC
T ss_pred ccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-------CccCC
Confidence 775 7999999999866432 12246
Q ss_pred ccccccCcccCCCCCCCC
Q 035691 622 GTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 622 gt~~y~aPE~~~~~~~s~ 639 (640)
||+.|+|||++.+..++.
T Consensus 255 gt~~y~aPE~~~~~~~~~ 272 (397)
T 1wak_A 255 QTRQYRSLEVLIGSGYNT 272 (397)
T ss_dssp SCGGGCCHHHHHTSCCCT
T ss_pred CCCcccCChhhcCCCCCc
Confidence 899999999999887765
No 297
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.94 E-value=6.2e-27 Score=257.42 Aligned_cols=186 Identities=24% Similarity=0.343 Sum_probs=151.0
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCC-cCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSD-FQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|.+..+|+.||||++... .....+.+.+|++++++++||||+++++++.... +.....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36799999999999999999999989999999998643 3344578999999999999999999999975422 223567
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc---
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI--- 594 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~--- 594 (640)
.++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~-------~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~ 162 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENC-------CGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLI 162 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCT-------TCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCE
T ss_pred EEEEEEeCCCCCHHHHHHhcccC-------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCcee
Confidence 89999999999999999754321 236777889999999999999999 69999999999999987664
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVSTN 640 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k 640 (640)
+||+|||+++....... .....||+.|+|||++.+..++.+
T Consensus 163 vKL~DFG~a~~~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~k 203 (676)
T 3qa8_A 163 HKIIDLGYAKELDQGEL-----CTEFVGTLQYLAPELLEQKKYTVT 203 (676)
T ss_dssp EEECSCCCCCBTTSCCC-----CCCCCSCCTTCSSCSSCCSCCSTT
T ss_pred EEEcccccccccccccc-----cccccCCcccCChHHhccCCCCch
Confidence 99999999987643221 123569999999999998888764
No 298
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.94 E-value=1.2e-27 Score=240.22 Aligned_cols=174 Identities=32% Similarity=0.430 Sum_probs=137.5
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.++|++.+.||+|+||.||+|.+ +|+.||||+++.. ...+.+.+|++++++++||||+++++++.. .....+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCCceE
Confidence 35688889999999999999988 4889999998643 245789999999999999999999998632 234678
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEcc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGD 599 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~D 599 (640)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 92 lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~D 160 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGR--------SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSD 160 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHH--------HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHHhccc--------ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEee
Confidence 99999999999999864321 126788899999999999999999 6999999999999999999999999
Q ss_pred ccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 600 FGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 600 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
||+++...... ....+++.|+|||++.+..++.
T Consensus 161 fg~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~ 193 (278)
T 1byg_A 161 FGLTKEASSTQ-------DTGKLPVKWTAPEALREKKFST 193 (278)
T ss_dssp CCC-------------------CCTTTSCHHHHHHCCCCH
T ss_pred ccccccccccc-------cCCCccccccCHHHhCCCCCCc
Confidence 99998543211 1234788999999987766653
No 299
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=241.14 Aligned_cols=177 Identities=25% Similarity=0.312 Sum_probs=142.7
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcC-CCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQ-GND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~~~ 516 (640)
.++|...+.||+|+||.||+|+++.+|+.||||++... .....+.+.+|+.+++.++||||+++++++...... ...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46788899999999999999999999999999999543 233456789999999999999999999997543311 112
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..++||||++ |+|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~------------~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~k 166 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL------------KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELK 166 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS------------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEE
T ss_pred eEEEEecccc-CCHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEE
Confidence 3589999998 588877631 27888999999999999999999 6999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCCC-CCCCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG-SQVST 639 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ 639 (640)
|+|||+++..... .....||+.|+|||++.+ ..++.
T Consensus 167 l~Dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~ 203 (353)
T 3coi_A 167 ILDFGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQ 203 (353)
T ss_dssp ECSTTCTTC---------------CCSBCCSCHHHHSCCSCCCT
T ss_pred EeecccccCCCCC-------ccccccCcCcCCHHHHhCcCCCCc
Confidence 9999999865321 123468999999999877 44443
No 300
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.94 E-value=1.1e-27 Score=250.96 Aligned_cols=178 Identities=14% Similarity=0.081 Sum_probs=126.6
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc---hhHHHHHHHHHHHHhc--CCCCCcceeE-------eec
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR---GALKSFMAECEALRNI--RHRNLVKIIT-------ACS 508 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~H~niv~l~~-------~~~ 508 (640)
..|...+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+.+++.+ +||||++++. ++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 347888999999999999999999999999999976432 3346777885555444 6999887553 322
Q ss_pred cCCc------------CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHH------HHHHHHHHHHHHHHh
Q 035691 509 SSDF------------QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQR------LNIAINVASALEYLH 570 (640)
Q Consensus 509 ~~~~------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~------~~i~~~i~~al~yLH 570 (640)
.... ......++|||||+ |+|.+++..... .+++..+ ..++.|++.||+|||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---------~~~~~~~~~~~vk~~i~~qi~~aL~~LH 211 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---------VYVFRGDEGILALHILTAQLIRLAANLQ 211 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---------SCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---------ccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 1110 00144799999999 899999965321 1233344 677899999999999
Q ss_pred cCCCCCeeeCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCC--CCCC
Q 035691 571 HHCKKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG--SQVS 638 (640)
Q Consensus 571 ~~~~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s 638 (640)
+ .+|+||||||+|||++.++.+||+|||+|+..... .....||+.|+|||++.+ ..++
T Consensus 212 ~---~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~ 271 (371)
T 3q60_A 212 S---KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-------GPASSVPVTYAPREFLNASTATFT 271 (371)
T ss_dssp H---TTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-------EEGGGSCGGGCCHHHHTCSEEECC
T ss_pred H---CCCccCcCCHHHEEECCCCCEEEEecceeeecCCC-------ccCccCCcCCcChhhccCCCCCcC
Confidence 9 69999999999999999999999999999865321 112347799999999987 4454
No 301
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.94 E-value=3.9e-27 Score=248.49 Aligned_cols=179 Identities=26% Similarity=0.366 Sum_probs=137.5
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc-CCCceee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDF-QGNDFKA 519 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~~~~~~ 519 (640)
.+|+..+.||+|+||.||+|++..+++ ||+|++..... ...+|+++++.++|||||++++++..... .+..+.+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 458888999999999999999986555 88887743322 12369999999999999999999754432 3344578
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeC-CCCcEEEc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLD-NDMIAHVG 598 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~-~~~~~kl~ 598 (640)
+||||++++.+......... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++ .++.+||+
T Consensus 115 lv~e~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~ 184 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKL-------KQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLI 184 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHT-------TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEEC
T ss_pred EEeeccCccHHHHHHHHHhh-------cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEe
Confidence 99999987544433211110 0237888999999999999999999 6999999999999999 79999999
Q ss_pred cccccccCCCccCCCceeeccccccccccCcccCCCCC-CCC
Q 035691 599 DFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ-VST 639 (640)
Q Consensus 599 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ 639 (640)
|||+|+.+.... ......||+.|+|||++.+.. ++.
T Consensus 185 DFG~a~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~ 221 (394)
T 4e7w_A 185 DFGSAKILIAGE-----PNVSYICSRYYRAPELIFGATNYTT 221 (394)
T ss_dssp CCTTCEECCTTC-----CCCSSCSCGGGCCHHHHTTCSSCCT
T ss_pred eCCCcccccCCC-----CCcccccCcCccCHHHHcCCCCCCc
Confidence 999998663321 122356899999999997754 543
No 302
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.94 E-value=1.6e-27 Score=240.78 Aligned_cols=174 Identities=24% Similarity=0.270 Sum_probs=129.7
Q ss_pred hcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc--hhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 439 ATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR--GALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 439 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
..++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+.++...++.++||||+++++++. ...
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-----~~~ 79 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REG 79 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-----ccC
Confidence 34678899999999999999999999999999999964422 22234445555678889999999999964 344
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeeCCCCCCCeeeCCCCcE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKK-QIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~-~ivHrdlkp~NiLl~~~~~~ 595 (640)
..++||||+++ +|.+++...... ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+
T Consensus 80 ~~~lv~e~~~~-~l~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~ 149 (290)
T 3fme_A 80 DVWICMELMDT-SLDKFYKQVIDK------GQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQV 149 (290)
T ss_dssp SEEEEEECCSE-EHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCE
T ss_pred CEEEEEehhcc-chHHHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCE
Confidence 78999999985 887776431110 0238899999999999999999998 5 99999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYG 632 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 632 (640)
||+|||+++....... .....||+.|+|||++
T Consensus 150 kl~Dfg~~~~~~~~~~-----~~~~~~t~~y~aPE~~ 181 (290)
T 3fme_A 150 KMCDFGISGYLVDDVA-----KDIDAGCKPYMAPERI 181 (290)
T ss_dssp EBCCC--------------------CCCCCCSCHHHH
T ss_pred EEeecCCccccccccc-----ccccCCCccccChhhc
Confidence 9999999986643211 1223589999999996
No 303
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.4e-27 Score=248.30 Aligned_cols=179 Identities=16% Similarity=0.201 Sum_probs=143.3
Q ss_pred cCCCcccCcccccccceEEEEEECC--------CCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcc---------
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDP--------DQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVK--------- 502 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~--------- 502 (640)
.++|++.+.||+|+||.||+|++.. .++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3678999999999999999999986 4889999998643 35789999999999999988
Q ss_pred ------eeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 035691 503 ------IITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQ 576 (640)
Q Consensus 503 ------l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ 576 (640)
+++++. ..+...++||||+ +|+|.+++..... ..+++..++.++.|++.||+|||+ .+
T Consensus 116 ~~~i~~~~~~~~----~~~~~~~lv~e~~-~~~L~~~l~~~~~--------~~l~~~~~~~i~~qi~~~L~~LH~---~~ 179 (352)
T 2jii_A 116 LLAIPTCMGFGV----HQDKYRFLVLPSL-GRSLQSALDVSPK--------HVLSERSVLQVACRLLDALEFLHE---NE 179 (352)
T ss_dssp TCSCCCCCEEEE----ETTTEEEEEEECC-CEEHHHHHHHSGG--------GCCCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred ccCccchhhccc----cCCcEEEEEecCC-CcCHHHHHHhCCc--------CCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence 444432 1245789999999 9999999975421 238899999999999999999999 69
Q ss_pred eeeCCCCCCCeeeCCCC--cEEEccccccccCCCccCCC---ceeeccccccccccCcccCCCCCCCC
Q 035691 577 IVHCDLKPSNVLLDNDM--IAHVGDFGLTRFIPEVISSN---QCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 577 ivHrdlkp~NiLl~~~~--~~kl~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|+||||||+||+++.++ .+||+|||+++.+....... ........||+.|+|||++.+..++.
T Consensus 180 ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 247 (352)
T 2jii_A 180 YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSR 247 (352)
T ss_dssp CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCH
T ss_pred ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCc
Confidence 99999999999999998 99999999998765332111 11123346999999999998877764
No 304
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.94 E-value=7.7e-27 Score=241.49 Aligned_cols=178 Identities=22% Similarity=0.271 Sum_probs=141.1
Q ss_pred HhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHHH-HHhcCCCCCcceeEeeccCCcCCC
Q 035691 438 KATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECEA-LRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 438 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
...++|++.+.||+|+||.||+|++..+|+.||||++.... ......+..|..+ ++.++||||+++++++.. .
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-----~ 122 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-----E 122 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-----S
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-----C
Confidence 34567888999999999999999999899999999996442 2233455666665 677899999999999643 3
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
...++||||+++ +|.+++...... ...+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+
T Consensus 123 ~~~~lv~e~~~~-~L~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~ 193 (340)
T 3an0_A 123 GDVWICMELMDT-SLDKFYKQVIDK------GQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQV 193 (340)
T ss_dssp SCEEEEECCCSE-EHHHHHHHHHHT------SCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCE
T ss_pred CcEEEEHHHhhC-cHHHHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCE
Confidence 478999999986 898887531100 02388999999999999999999982 399999999999999999999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
||+|||+++..... .......||+.|+|||++.+
T Consensus 194 kl~Dfg~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~ 227 (340)
T 3an0_A 194 KMCDFGISGYLVDS-----VAKTIDAGCKPYMAPERINP 227 (340)
T ss_dssp EECCCSHHHHHSCH-----HHHHHSSCCCCCCCHHHHSC
T ss_pred EEeeCCCceecccc-----cccccCCCCccccCcccccc
Confidence 99999999865321 11122469999999999754
No 305
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.94 E-value=9.3e-27 Score=240.46 Aligned_cols=175 Identities=22% Similarity=0.317 Sum_probs=145.1
Q ss_pred cCCCcccCcccccccceEEEEEE-CCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCC------CcceeEeeccCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGIL-DPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRN------LVKIITACSSSDF 512 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~ 512 (640)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~----- 86 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF----- 86 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE-----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc-----
Confidence 46789999999999999999998 567899999998643 234567889999999887654 89999985
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC-
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN- 591 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~- 591 (640)
......++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~ 154 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENGF--------LPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQS 154 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTT--------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCC
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcCC--------CCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEecc
Confidence 3445889999999 8899998865432 237888999999999999999999 69999999999999987
Q ss_pred ------------------CCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 592 ------------------DMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 592 ------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
++.+||+|||+++..... .....||+.|+|||++.+..++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~ 213 (339)
T 1z57_A 155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-------HSTLVSTRHYRAPEVILALGWSQ 213 (339)
T ss_dssp CEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-------CCSSCSCGGGCCHHHHTTSCCCT
T ss_pred ccccccCCccccccccccCCCceEeeCcccccCccc-------cccccCCccccChHHhhCCCCCc
Confidence 668999999999865322 12346899999999999887765
No 306
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=6e-26 Score=226.91 Aligned_cols=221 Identities=22% Similarity=0.244 Sum_probs=175.7
Q ss_pred CCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCc
Q 035691 82 NIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYL 161 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 161 (640)
++..+++..+.+... ..+..+++|+.|++++|.++. + ..+..+++|++|+|++|.++.+ ..+.++++|
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--------~~l~~l~~L 87 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--------SALKELTNL 87 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--------GGGTTCTTC
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--------hhhcCCCCC
Confidence 444566666666543 335567788888888888874 3 3477888888888888888764 356778888
Q ss_pred ceEecCCCCCCCcCcC-CCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCc
Q 035691 162 EIVSLNVNSLRSIPIS-VGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKT 240 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n 240 (640)
++|++++|.++.+|.. +..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+.|
T Consensus 88 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L----- 162 (272)
T 3rfs_A 88 TYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL----- 162 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE-----
T ss_pred CEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE-----
Confidence 8888888888886654 5778889999999999988777778888999999999999887777778888888888
Q ss_pred cccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCC
Q 035691 241 IFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSL 320 (640)
Q Consensus 241 ~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 320 (640)
++++|++++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++.+. +++|
T Consensus 163 -----------~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l 224 (272)
T 3rfs_A 163 -----------DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGI 224 (272)
T ss_dssp -----------ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTT
T ss_pred -----------ECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHH
Confidence 7778888877778888889999999999999887777788889999999999988743 4578
Q ss_pred CeEeCcCCccccccCCcccCCC
Q 035691 321 EGLDLFQNTFQAKSQNGDVPRK 342 (640)
Q Consensus 321 ~~L~l~~N~l~~~~~~~~~p~~ 342 (640)
+.|+++.|.++ |.+|..
T Consensus 225 ~~l~~~~n~~~-----g~ip~~ 241 (272)
T 3rfs_A 225 RYLSEWINKHS-----GVVRNS 241 (272)
T ss_dssp HHHHHHHHHTG-----GGBBCT
T ss_pred HHHHHHHHhCC-----CcccCc
Confidence 88888888888 677754
No 307
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=7.8e-27 Score=263.53 Aligned_cols=172 Identities=26% Similarity=0.357 Sum_probs=142.2
Q ss_pred cCCCcccCcccccccceEEEEEECC-CCeEEEEEEeecc-cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDP-DQTVVAVKVLFLH-QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|++.. +|+.||||++... .....+.+.+|++++++++|||||++++++......+...
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 4679999999999999999999975 7899999998543 2344567899999999999999999999986554333334
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHV 597 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl 597 (640)
.|+||||+++++|.+++.. .+++..++.|+.||+.||.|||+ .+|+||||||+||+++.+ .+||
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------------~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl 222 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------------KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKL 222 (681)
T ss_dssp EEEEEECCCCEECC----C------------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEE
T ss_pred eEEEEEeCCCCcHHHHHhC------------CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEE
Confidence 6999999999999887642 27899999999999999999999 699999999999999875 8999
Q ss_pred ccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 598 GDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 598 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
+|||+++..... ....||+.|+|||++.+.
T Consensus 223 ~DFG~a~~~~~~--------~~~~gt~~y~aPE~~~~~ 252 (681)
T 2pzi_A 223 IDLGAVSRINSF--------GYLYGTPGFQAPEIVRTG 252 (681)
T ss_dssp CCCTTCEETTCC--------SCCCCCTTTSCTTHHHHC
T ss_pred EecccchhcccC--------CccCCCccccCHHHHcCC
Confidence 999999865432 234699999999988654
No 308
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.93 E-value=1.4e-26 Score=245.50 Aligned_cols=185 Identities=24% Similarity=0.348 Sum_probs=129.8
Q ss_pred Ccc-cCcccccccceEEEEEEC--CCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCceee
Q 035691 443 FSS-ANLIGTGSFGSVYKGILD--PDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 443 ~~~-~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
|.+ .++||+|+||.||+|+++ .+++.||||++.... ....+.+|+.++++++|||||++++++.. ......+
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~~~ 96 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKVW 96 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCeEE
Confidence 444 458999999999999976 468899999985432 23568899999999999999999999743 2345789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee----CCCCcE
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL----DNDMIA 595 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl----~~~~~~ 595 (640)
+||||+++ +|.+++........ ......+++..+..++.|++.||.|||+ .+|+||||||+|||+ +.++.+
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~-~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKA-NKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEeCCCC-CHHHHHHHhccccc-cccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcE
Confidence 99999975 78777642211000 0011248899999999999999999999 699999999999999 778999
Q ss_pred EEccccccccCCCccCCCceeeccccccccccCcccCCCCC-CC
Q 035691 596 HVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQ-VS 638 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s 638 (640)
||+|||+|+.+...... .......+||+.|+|||++.+.. ++
T Consensus 172 kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ 214 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYT 214 (405)
T ss_dssp EECCTTCCC-----------------CCCTTCCHHHHTTCCSCC
T ss_pred EEEECCCceecCCCCcc-cccCCCceecCcccCchhhcCCCccc
Confidence 99999999876432211 12223457999999999998754 44
No 309
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.93 E-value=1.2e-26 Score=244.05 Aligned_cols=183 Identities=25% Similarity=0.310 Sum_probs=148.1
Q ss_pred HHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC-CCC-----CcceeEee
Q 035691 434 ESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR-HRN-----LVKIITAC 507 (640)
Q Consensus 434 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n-----iv~l~~~~ 507 (640)
.......++|++.+.||+|+||+||+|++..+++.||||+++.. ......+..|+.+++.++ |++ |+++++++
T Consensus 47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~ 125 (382)
T 2vx3_A 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF 125 (382)
T ss_dssp CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence 33345567899999999999999999999999999999999633 233467788999998885 553 89999985
Q ss_pred ccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCe
Q 035691 508 SSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNV 587 (640)
Q Consensus 508 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~Ni 587 (640)
. .....++||||++ |+|.+++..... ..+++..+..++.|++.||.|||++ ..+|+||||||+||
T Consensus 126 ~-----~~~~~~lv~e~~~-~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NI 190 (382)
T 2vx3_A 126 M-----FRNHLCLVFEMLS-YNLYDLLRNTNF--------RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENI 190 (382)
T ss_dssp E-----ETTEEEEEEECCC-CBHHHHHHHTTT--------SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGE
T ss_pred c-----cCCceEEEEecCC-CCHHHHHhhcCc--------CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccE
Confidence 3 3458899999996 599998865432 2378899999999999999999952 26899999999999
Q ss_pred eeC--CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 588 LLD--NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 588 Ll~--~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
|++ .++.+||+|||+|+..... .....||+.|+|||++.+..++.
T Consensus 191 ll~~~~~~~~kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~ 237 (382)
T 2vx3_A 191 LLCNPKRSAIKIVDFGSSCQLGQR-------IYQYIQSRFYRSPEVLLGMPYDL 237 (382)
T ss_dssp EESSTTSCCEEECCCTTCEETTCC-------CCSSCSCGGGCCHHHHTTCCCCT
T ss_pred EEecCCCCcEEEEeccCceecccc-------cccccCCccccChHHHcCCCCCc
Confidence 994 5788999999999866432 12346899999999999988775
No 310
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.93 E-value=1.2e-26 Score=234.01 Aligned_cols=173 Identities=28% Similarity=0.363 Sum_probs=144.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++. ....
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 95 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----DSSS 95 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe-----CCCe
Confidence 456899999999999999999999899999999996443 234578999999999999999999999964 3457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC---Cc
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND---MI 594 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~---~~ 594 (640)
.++||||+++++|.+++.... .+++..++.++.|++.||.|||+ .+|+||||||+||+++.+ +.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~ 162 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKRK----------RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCD 162 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCC
T ss_pred EEEEEEccCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCccc
Confidence 899999999999998875432 27889999999999999999999 699999999999999754 47
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGS 635 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 635 (640)
+||+|||+++....... .....||+.|+|||++.+.
T Consensus 163 ~kL~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~ 198 (287)
T 2wei_A 163 IKIIDFGLSTCFQQNTK-----MKDRIGTAYYIAPEVLRGT 198 (287)
T ss_dssp EEECSTTGGGTBCCCSS-----CSCHHHHHTTCCHHHHTTC
T ss_pred EEEeccCcceeecCCCc-----cccccCcccccChHHhcCC
Confidence 99999999986543211 1223589999999998764
No 311
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.3e-25 Score=224.44 Aligned_cols=227 Identities=22% Similarity=0.258 Sum_probs=154.4
Q ss_pred CCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCC
Q 035691 28 QLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKL 107 (640)
Q Consensus 28 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 107 (640)
++..+++..+.+..... +..+++|+.|++++|.++. ++ .+..+++|
T Consensus 20 ~l~~l~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~------~~--------------------------~l~~l~~L 65 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAVT--QNELNSIDQIIANNSDIKS------VQ--------------------------GIQYLPNV 65 (272)
T ss_dssp HHHHHHHTCSCTTSEEC--HHHHTTCCEEECTTSCCCC------CT--------------------------TGGGCTTC
T ss_pred HHHHHHhcCcccccccc--cccccceeeeeeCCCCccc------cc--------------------------ccccCCCC
Confidence 34455566666554322 3456666666666666543 22 23444555
Q ss_pred CEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcC-CCCCCCCCE
Q 035691 108 EWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPIS-VGYLPKLQV 186 (640)
Q Consensus 108 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~-~~~l~~L~~ 186 (640)
++|+|++|++++. ..+..+++|++|+|++|.++.+ .+..|.++++|++|++++|+++.+|.. +..+++|++
T Consensus 66 ~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 137 (272)
T 3rfs_A 66 RYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSL------PNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137 (272)
T ss_dssp CEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCC------CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred cEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCcc------ChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCE
Confidence 5555555555532 2445555555555555555544 223344555555555555555554443 566788888
Q ss_pred EEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccC
Q 035691 187 LSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAV 266 (640)
Q Consensus 187 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~ 266 (640)
|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+.| ++++|++++..+..|
T Consensus 138 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L----------------~L~~N~l~~~~~~~~ 201 (272)
T 3rfs_A 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL----------------RLYQNQLKSVPDGVF 201 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE----------------ECCSSCCSCCCTTTT
T ss_pred EECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE----------------ECCCCcCCccCHHHH
Confidence 8888888887777778888888888888888887777778888888888 777888888888888
Q ss_pred CCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCC
Q 035691 267 GNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKS 319 (640)
Q Consensus 267 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 319 (640)
..+++|+.|+|++|.+.+. +++|++|+++.|.++|.+|..++.+..
T Consensus 202 ~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 202 DRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred hCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 9999999999999988743 557899999999999999988876543
No 312
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.93 E-value=1.3e-26 Score=239.12 Aligned_cols=176 Identities=21% Similarity=0.298 Sum_probs=123.8
Q ss_pred cCCCccc-CcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHH-HHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSA-NLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAEC-EALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|.+. ++||+|+||.||+|+++.+|+.||||++.... ...+|+ ..++.++||||+++++++.... ..+..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 100 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMH-HGKRC 100 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCce
Confidence 4567774 46999999999999999999999999985432 122333 3456679999999999975421 22456
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC---CCc
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN---DMI 594 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~---~~~ 594 (640)
.++||||+++|+|.+++..... ..+++..++.++.|++.||.|||+ .+|+||||||+||+++. ++.
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~--------~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~ 169 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGD--------QAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAV 169 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-C--------CCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCC
T ss_pred EEEEEeccCCCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCce
Confidence 8999999999999999975432 248899999999999999999999 69999999999999976 456
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
+||+|||+++...... .....||+.|+|||++.+..++
T Consensus 170 ~kl~Dfg~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~ 207 (336)
T 3fhr_A 170 LKLTDFGFAKETTQNA------LQTPCYTPYYVAPEVLGPEKYD 207 (336)
T ss_dssp EEECCCTTCEEC----------------------------CHHH
T ss_pred EEEeccccceeccccc------cccCCCCcCccChhhhCCCCCC
Confidence 9999999998653211 1234589999999999776554
No 313
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.93 E-value=7.1e-27 Score=261.43 Aligned_cols=182 Identities=25% Similarity=0.371 Sum_probs=145.4
Q ss_pred HHhcCCCcccCcccccccceEEEEEECC---CCeEEEEEEeeccc-chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCc
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILDP---DQTVVAVKVLFLHQ-RGALKSFMAECEALRNIRHRNLVKIITACSSSDF 512 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 512 (640)
....++|++.+.||+|+||.||+|++.. .+..||+|++.... ....+.+.+|+.++++++|||||++++++.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~---- 461 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT---- 461 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe----
Confidence 3445668888999999999999999864 35679999986433 334578999999999999999999999863
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND 592 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~ 592 (640)
++..++||||+++|+|.+++.... ..+++..++.++.|++.||.|||+ .+|+||||||+|||++.+
T Consensus 462 --~~~~~lv~E~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~ 527 (656)
T 2j0j_A 462 --ENPVWIIMELCTLGELRSFLQVRK---------FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSN 527 (656)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHTT---------TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEET
T ss_pred --cCceEEEEEcCCCCcHHHHHHhcc---------CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCC
Confidence 234789999999999999996432 237889999999999999999999 699999999999999999
Q ss_pred CcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 593 MIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 593 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+.+||+|||+++....... .......||+.|+|||++.+..++.
T Consensus 528 ~~vkL~DFG~a~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~ 571 (656)
T 2j0j_A 528 DCVKLGDFGLSRYMEDSTY---YKASKGKLPIKWMAPESINFRRFTS 571 (656)
T ss_dssp TEEEECCCCCCCSCCC-------------CCGGGCCHHHHHHCCCCH
T ss_pred CCEEEEecCCCeecCCCcc---eeccCCCCCcceeCHHHhcCCCCCc
Confidence 9999999999987643221 1122345788999999987776653
No 314
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=7.9e-26 Score=221.53 Aligned_cols=197 Identities=18% Similarity=0.198 Sum_probs=120.3
Q ss_pred CCCCeeeccCCcccccCCccCcCCCCCCEEECcCCc-cCccCCccccCCCCCCEEEccc-CcCCCCCCCcccccccccCC
Q 035691 81 PNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNS-LTASIPEDLGRLRNLTRLNFAR-NDLGTRKVNDLRFLDSLVNC 158 (640)
Q Consensus 81 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~~~l~~l 158 (640)
++|+.|+|++|+|+++.+..|.++++|++|+|++|+ ++.+.+.+|.++++|++|+|++ |+++.++ +..|.++
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~------~~~f~~l 104 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID------PDALKEL 104 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC------TTSEECC
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC------HHHhCCC
Confidence 366666666666666666667777777777777775 6666666677777777777776 7776552 2345556
Q ss_pred CCcceEecCCCCCCCcCcCCCCCCCCC---EEEccCC-cCcccCCcCccCCCCCC-EEEccCCCCCCCCCccccCCCCcc
Q 035691 159 TYLEIVSLNVNSLRSIPISVGYLPKLQ---VLSLFEN-NISGEIPSSLGNFTFLT-ELNLRGNSIRGSIPSALGNCHQLQ 233 (640)
Q Consensus 159 ~~L~~L~L~~N~l~~ip~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~ 233 (640)
++|++|++++|.++.+|. +..+++|+ +|++++| .++++.+..|.++++|+ +|++++|+++...+..|.. ++|+
T Consensus 105 ~~L~~L~l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~ 182 (239)
T 2xwt_C 105 PLLKFLGIFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLD 182 (239)
T ss_dssp TTCCEEEEEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEE
T ss_pred CCCCEEeCCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCC
Confidence 666666666666666665 55555665 7777777 66666566666666666 6666666666333333433 4555
Q ss_pred EEeccCccccCCCCCceEEccCCc-CCCCCCccCCCC-CCCCEEECCCCcccCcCCccccCCCCCCeEEecCC
Q 035691 234 SLDLSKTIFLGQYPVRWLDLSHNH-LTGPIPLAVGNL-KSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSIN 304 (640)
Q Consensus 234 ~L~ls~n~~~~~~~l~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 304 (640)
.| ++++|+ +++..+..|.++ ++|+.|++++|+|++ +|.. .+++|+.|+++++
T Consensus 183 ~L----------------~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 183 AV----------------YLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp EE----------------ECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred EE----------------EcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 55 555553 554555556666 666666666666653 2222 3445555555554
No 315
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.93 E-value=4.5e-27 Score=237.52 Aligned_cols=179 Identities=29% Similarity=0.402 Sum_probs=135.5
Q ss_pred CCCcccCcccccccceEEEEEECC-CC--eEEEEEEeecc---cchhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCC
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDP-DQ--TVVAVKVLFLH---QRGALKSFMAECEALRNIRHRNLVKIITACSSSDFQG 514 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 514 (640)
++|++.+.||+|+||.||+|++.. ++ ..||||+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 93 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---- 93 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC----
Confidence 468889999999999999998642 33 36899998643 234457899999999999999999999996432
Q ss_pred CceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCc
Q 035691 515 NDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMI 594 (640)
Q Consensus 515 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~ 594 (640)
..++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.
T Consensus 94 --~~~~v~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~ 159 (291)
T 1u46_A 94 --PMKMVTELAPLGSLLDRLRKHQ---------GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDL 159 (291)
T ss_dssp --SCEEEEECCTTCBHHHHHHHHG---------GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTE
T ss_pred --CceeeEecccCCCHHHHHHhcc---------CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCC
Confidence 3689999999999999986432 237888999999999999999999 69999999999999999999
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVS 638 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 638 (640)
+||+|||+++........ ........+|+.|+|||++.+..++
T Consensus 160 ~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~ 202 (291)
T 1u46_A 160 VKIGDFGLMRALPQNDDH-YVMQEHRKVPFAWCAPESLKTRTFS 202 (291)
T ss_dssp EEECCCTTCEECCC-CCE-EEC-----CCGGGCCHHHHHHCEEE
T ss_pred EEEccccccccccccccc-hhhhccCCCCceeeCchhhcCCCCC
Confidence 999999999876432211 1112234578899999998766554
No 316
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.93 E-value=4.9e-27 Score=239.88 Aligned_cols=178 Identities=22% Similarity=0.288 Sum_probs=139.9
Q ss_pred HHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc------hhHHHHHHHHHHHHhc----CCCCCcceeE
Q 035691 436 LLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR------GALKSFMAECEALRNI----RHRNLVKIIT 505 (640)
Q Consensus 436 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~H~niv~l~~ 505 (640)
.....++|++.+.||+|+||.||+|++..+++.||||++..... .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 34556789999999999999999999988999999999954322 1223466799999988 8999999999
Q ss_pred eeccCCcCCCceeeEEeec-cCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCC
Q 035691 506 ACSSSDFQGNDFKALVYEF-MHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKP 584 (640)
Q Consensus 506 ~~~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp 584 (640)
++ ...+..++|||| +.+++|.+++.... .+++..++.++.|++.||+|||+ .+|+||||||
T Consensus 106 ~~-----~~~~~~~~v~e~~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp 167 (312)
T 2iwi_A 106 WF-----ETQEGFMLVLERPLPAQDLFDYITEKG----------PLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKD 167 (312)
T ss_dssp EC----------CEEEEECCSSEEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSG
T ss_pred EE-----ecCCeEEEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCh
Confidence 95 344578899999 78999999986432 27889999999999999999999 6999999999
Q ss_pred CCeeeC-CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 585 SNVLLD-NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 585 ~NiLl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
+||+++ .++.+||+|||+++...... .....||+.|+|||++.+..+
T Consensus 168 ~Nil~~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~ 215 (312)
T 2iwi_A 168 ENILIDLRRGCAKLIDFGSGALLHDEP------YTDFDGTRVYSPPEWISRHQY 215 (312)
T ss_dssp GGEEEETTTTEEEECCCSSCEECCSSC------BCCCCSCTTTSCHHHHHHSCB
T ss_pred hhEEEeCCCCeEEEEEcchhhhcccCc------ccccCCcccccCceeeecCCC
Confidence 999999 88999999999998664321 123458999999998876554
No 317
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.93 E-value=1.4e-26 Score=242.70 Aligned_cols=179 Identities=20% Similarity=0.310 Sum_probs=146.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC-----------CCCCcceeEeec
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR-----------HRNLVKIITACS 508 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~ 508 (640)
.++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35789999999999999999999989999999998633 234467889999999886 899999999975
Q ss_pred cCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeeCCCCCCCe
Q 035691 509 SSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKK-QIVHCDLKPSNV 587 (640)
Q Consensus 509 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~-~ivHrdlkp~Ni 587 (640)
... ......++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+ . +|+||||||+||
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~--------~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NI 163 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKKYEH--------RGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENV 163 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHHTTT--------SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHHhhc--------cCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHe
Confidence 432 2233689999999 8899999865332 237889999999999999999999 6 999999999999
Q ss_pred eeC------CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 588 LLD------NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 588 Ll~------~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+++ ..+.+||+|||+++...... ....||+.|+|||++.+..++.
T Consensus 164 ll~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~ 214 (373)
T 1q8y_A 164 LMEIVDSPENLIQIKIADLGNACWYDEHY-------TNSIQTREYRSPEVLLGAPWGC 214 (373)
T ss_dssp EEEEEETTTTEEEEEECCCTTCEETTBCC-------CSCCSCGGGCCHHHHHTCCCCT
T ss_pred EEeccCCCcCcceEEEcccccccccCCCC-------CCCCCCccccCcHHHhCCCCCc
Confidence 994 44589999999998664321 2236899999999999887765
No 318
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=8.6e-26 Score=221.27 Aligned_cols=194 Identities=13% Similarity=0.141 Sum_probs=116.7
Q ss_pred CCCeEEcccCccCccCCcCCCCCCCCCEEEccCCC-cCCccccccCCchhhcCCCCCCeeeccC-CcccccCCccCcCCC
Q 035691 28 QLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNK-LEENQLVGELPPYIGFTLPNIRIPLLAG-NQFFGNIPHSISNAS 105 (640)
Q Consensus 28 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~lp~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~ 105 (640)
+|++|++++|+|+++.+..|.++++|++|++++|+ ++. +|+..|..+++|+.|+|++ |+++++.+..|.+++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~------i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~ 105 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQ------LESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELP 105 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCE------ECTTTEESCTTCCEEEEEEETTCCEECTTSEECCT
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcce------eCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCC
Confidence 66777777777766666566667777777777665 553 5655555666666666666 666666666666666
Q ss_pred CCCEEECcCCccCccCCccccCCCCCC---EEEcccC-cCCCCCCCcccccccccCCCCcc-eEecCCCCCCCcCcCCCC
Q 035691 106 KLEWLDFANNSLTASIPEDLGRLRNLT---RLNFARN-DLGTRKVNDLRFLDSLVNCTYLE-IVSLNVNSLRSIPISVGY 180 (640)
Q Consensus 106 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~~~~l~~l~~L~-~L~L~~N~l~~ip~~~~~ 180 (640)
+|++|+|++|++++ +|. |..+++|+ +|++++| +++.++ +..|.++++|+ .|++++|.++.+|.....
T Consensus 106 ~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~------~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~ 177 (239)
T 2xwt_C 106 LLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIP------VNAFQGLCNETLTLKLYNNGFTSVQGYAFN 177 (239)
T ss_dssp TCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEEC------TTTTTTTBSSEEEEECCSCCCCEECTTTTT
T ss_pred CCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcC------cccccchhcceeEEEcCCCCCcccCHhhcC
Confidence 66666666666664 343 56666666 6666666 665542 23355566666 666666666665554433
Q ss_pred CCCCCEEEccCCc-CcccCCcCccCC-CCCCEEEccCCCCCCCCCccccCCCCccEEecc
Q 035691 181 LPKLQVLSLFENN-ISGEIPSSLGNF-TFLTELNLRGNSIRGSIPSALGNCHQLQSLDLS 238 (640)
Q Consensus 181 l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 238 (640)
.++|++|+|++|+ ++++.+..|.++ ++|+.|+|++|++++..+. .+++|+.|+++
T Consensus 178 ~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~ 234 (239)
T 2xwt_C 178 GTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIAR 234 (239)
T ss_dssp TCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECT
T ss_pred CCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeecc
Confidence 4556666666663 665555556666 6666666666666533332 34455555443
No 319
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.93 E-value=9.5e-27 Score=238.60 Aligned_cols=177 Identities=22% Similarity=0.291 Sum_probs=145.9
Q ss_pred HHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccch------hHHHHHHHHHHHHhcC--CCCCcceeEeec
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRG------ALKSFMAECEALRNIR--HRNLVKIITACS 508 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~~~~~ 508 (640)
....++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34467799999999999999999999999999999999644221 2245678999999996 599999999954
Q ss_pred cCCcCCCceeeEEeeccCC-CChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCe
Q 035691 509 SSDFQGNDFKALVYEFMHH-GSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNV 587 (640)
Q Consensus 509 ~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~Ni 587 (640)
..+..++||||+.+ ++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||
T Consensus 119 -----~~~~~~lv~e~~~~~~~L~~~l~~~~----------~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NI 180 (320)
T 3a99_A 119 -----RPDSFVLILERPEPVQDLFDFITERG----------ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENI 180 (320)
T ss_dssp -----CSSEEEEEEECCSSEEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred -----cCCcEEEEEEcCCCCccHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHE
Confidence 34578999999986 89999986432 27888999999999999999999 6999999999999
Q ss_pred eeC-CCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCC
Q 035691 588 LLD-NDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQV 637 (640)
Q Consensus 588 Ll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 637 (640)
+++ +++.+||+|||+++...... .....||+.|+|||++.+..+
T Consensus 181 ll~~~~~~~kL~Dfg~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~ 225 (320)
T 3a99_A 181 LIDLNRGELKLIDFGSGALLKDTV------YTDFDGTRVYSPPEWIRYHRY 225 (320)
T ss_dssp EEETTTTEEEECCCTTCEECCSSC------BCCCCSCGGGSCHHHHHHSCB
T ss_pred EEeCCCCCEEEeeCcccccccccc------ccCCCCCccCCChHHhccCCC
Confidence 999 78999999999998664321 123458999999999876554
No 320
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.93 E-value=3.6e-26 Score=235.04 Aligned_cols=175 Identities=23% Similarity=0.308 Sum_probs=123.6
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc-chhHHHHHHHHH-HHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ-RGALKSFMAECE-ALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|+..+.||+|+||.||+|.+..+|+.||||++.... ......+..|+. +++.++||||+++++++. ..+.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~-----~~~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF-----REGD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE-----CSSE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE-----eCCc
Confidence 367888899999999999999999899999999996543 233345666666 667789999999999964 3457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeeCCCCCCCeeeCCCCcEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKK-QIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~-~ivHrdlkp~NiLl~~~~~~k 596 (640)
.++||||+++ +|.+++...... ....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+|
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~-----~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~k 166 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSV-----LDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIK 166 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT-----TCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEE
T ss_pred eEEEEeecCC-ChHHHHHHHHhh-----hcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEE
Confidence 8999999986 777766421000 01237888999999999999999999 6 999999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
|+|||+++....... .....||+.|+|||++.
T Consensus 167 l~Dfg~~~~~~~~~~-----~~~~~gt~~y~aPE~~~ 198 (327)
T 3aln_A 167 LCDFGISGQLVDSIA-----KTRDAGCRPYMAPERID 198 (327)
T ss_dssp ECCCSSSCC----------------------------
T ss_pred EccCCCceecccccc-----cccCCCCccccCceeec
Confidence 999999986643211 12235899999999983
No 321
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.93 E-value=2.3e-25 Score=231.17 Aligned_cols=211 Identities=17% Similarity=0.138 Sum_probs=130.3
Q ss_pred cEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCe
Q 035691 6 MLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRI 85 (640)
Q Consensus 6 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~ 85 (640)
++++.++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|||++|++.+ .+|...|.+++++..
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~-----~i~~~~f~~L~~l~~ 83 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE-----VIEADVFSNLPKLHE 83 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCC-----EECTTSBCSCTTCCE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCC-----ccChhHhhcchhhhh
Confidence 45666777777 556554 2467777777777776555667777777777777666532 466666666666553
Q ss_pred -eeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEccc-CcCCCCCCCcccccccccCCC-Ccc
Q 035691 86 -PLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFAR-NDLGTRKVNDLRFLDSLVNCT-YLE 162 (640)
Q Consensus 86 -L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~~~l~~l~-~L~ 162 (640)
+.++.|+|+++.|+.|.++++|++|++++|+|+...+..+....++..|++.+ |++..++. ..|..+. .++
T Consensus 84 ~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~------~~f~~~~~~l~ 157 (350)
T 4ay9_X 84 IRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIER------NSFVGLSFESV 157 (350)
T ss_dssp EEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECT------TSSTTSBSSCE
T ss_pred hhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccc------cchhhcchhhh
Confidence 55566777776677777777777777777777766555566666666666644 45555532 2233332 456
Q ss_pred eEecCCCCCCCcCcCCCCCCCCCEEEccC-CcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCC
Q 035691 163 IVSLNVNSLRSIPISVGYLPKLQVLSLFE-NNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCH 230 (640)
Q Consensus 163 ~L~L~~N~l~~ip~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 230 (640)
.|+|++|+|+.+|...+...+|++|++++ |.++.+.++.|.++++|++|+|++|+|+...+..|.+++
T Consensus 158 ~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~ 226 (350)
T 4ay9_X 158 ILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLK 226 (350)
T ss_dssp EEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCC
T ss_pred hhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccch
Confidence 66666666666666555555666666653 555544445566666666666666666644444444333
No 322
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.93 E-value=4.3e-26 Score=237.14 Aligned_cols=175 Identities=21% Similarity=0.310 Sum_probs=142.7
Q ss_pred cCCCcccCcccccccceEEEEEECCCC-eEEEEEEeecccchhHHHHHHHHHHHHhcCCCC------CcceeEeeccCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQ-TVVAVKVLFLHQRGALKSFMAECEALRNIRHRN------LVKIITACSSSDF 512 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~ 512 (640)
.++|++.+.||+|+||.||+|++..++ +.||+|+++.. ....+.+.+|+.+++.++|++ ++.+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~----- 91 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF----- 91 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE-----
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee-----
Confidence 467899999999999999999997766 79999999643 234467889999999997766 88888884
Q ss_pred CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeee---
Q 035691 513 QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLL--- 589 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl--- 589 (640)
......++||||+ +|++.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++
T Consensus 92 ~~~~~~~lv~e~~-~~~l~~~l~~~~~--------~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~ 159 (355)
T 2eu9_A 92 NFHGHMCIAFELL-GKNTFEFLKENNF--------QPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNS 159 (355)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTT--------CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCC
T ss_pred eeCCeEEEEEecc-CCChHHHHHhccC--------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecc
Confidence 3445789999999 6677776654322 237889999999999999999999 699999999999999
Q ss_pred ----------------CCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCCCCCCC
Q 035691 590 ----------------DNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMGSQVST 639 (640)
Q Consensus 590 ----------------~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ 639 (640)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~ 218 (355)
T 2eu9_A 160 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-------HTTIVATRHYRPPEVILELGWAQ 218 (355)
T ss_dssp CEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-------CCSSCSCGGGCCHHHHTTCCCCT
T ss_pred cccccccccccccccccCCCcEEEeecCcccccccc-------ccCCcCCCcccCCeeeecCCCCC
Confidence 56789999999999864322 12346999999999999887765
No 323
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.93 E-value=3e-26 Score=244.80 Aligned_cols=176 Identities=24% Similarity=0.323 Sum_probs=126.5
Q ss_pred CcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCceeeEE
Q 035691 443 FSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGNDFKALV 521 (640)
Q Consensus 443 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~~~~lv 521 (640)
|...+.||+|+||+||.+.. .+|+.||||++.... .+.+.+|+++++++ +|||||++++++ ......++|
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~~~~~~lv 87 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSE-----TTDRFLYIA 87 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEEEEE
T ss_pred eeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCeEEEE
Confidence 44568899999999987544 479999999985432 35678999999886 899999999984 445678999
Q ss_pred eeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCC---------
Q 035691 522 YEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDND--------- 592 (640)
Q Consensus 522 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~--------- 592 (640)
||||. |+|.+++......... ....++..++.++.||+.||+|||+ .+|+||||||+||+++.+
T Consensus 88 ~E~~~-gsL~~~l~~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~ 160 (434)
T 2rio_A 88 LELCN-LNLQDLVESKNVSDEN---LKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQT 160 (434)
T ss_dssp ECCCS-EEHHHHHHTC---------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTT
T ss_pred EecCC-CCHHHHHhccCCCchh---hhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCccccccccc
Confidence 99996 6999999754432100 0111333467899999999999999 699999999999999754
Q ss_pred ----CcEEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 593 ----MIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 593 ----~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
+.+||+|||+++.+..............+||+.|+|||++.+
T Consensus 161 ~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 206 (434)
T 2rio_A 161 GAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE 206 (434)
T ss_dssp CCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred CCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence 489999999998765432211112234569999999999976
No 324
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.93 E-value=2.2e-27 Score=247.57 Aligned_cols=207 Identities=17% Similarity=0.168 Sum_probs=129.3
Q ss_pred EEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCC----cCCCCCC-CCCEEEccCCCcCCccccccCCchhhcCC-
Q 035691 7 LINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIP----VNLTHCS-ELRTLDLVLNKLEENQLVGELPPYIGFTL- 80 (640)
Q Consensus 7 ~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l- 80 (640)
.++|++|++++.+|..+....+|++|+|++|.|++..+ ..|..++ +|++|+|++|+|+. .....+..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~------~~~~~l~~~l 75 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGF------KNSDELVQIL 75 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGG------SCHHHHHHHH
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCH------HHHHHHHHHH
Confidence 56888999998888777777779999999999886666 6777888 89999998888764 322222222
Q ss_pred ----CCCCeeeccCCcccccCCccCc----CC-CCCCEEECcCCccCccCCcccc----C-CCCCCEEEcccCcCCCCCC
Q 035691 81 ----PNIRIPLLAGNQFFGNIPHSIS----NA-SKLEWLDFANNSLTASIPEDLG----R-LRNLTRLNFARNDLGTRKV 146 (640)
Q Consensus 81 ----~~L~~L~L~~N~l~~~~~~~~~----~l-~~L~~L~Ls~N~l~~~~~~~~~----~-l~~L~~L~L~~N~l~~~~~ 146 (640)
++|+.|+|++|++++..+..+. .+ ++|++|+|++|+|++..+..+. . .++|++|+|++|+++....
T Consensus 76 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 76 AAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp HTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred hccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 7788888888888766665433 33 6788888888887765554433 3 2477777777777765422
Q ss_pred CcccccccccCCC-CcceEecCCCCCCCcCc-----CCCCC-CCCCEEEccCCcCccc----CCcCccC-CCCCCEEEcc
Q 035691 147 NDLRFLDSLVNCT-YLEIVSLNVNSLRSIPI-----SVGYL-PKLQVLSLFENNISGE----IPSSLGN-FTFLTELNLR 214 (640)
Q Consensus 147 ~~~~~~~~l~~l~-~L~~L~L~~N~l~~ip~-----~~~~l-~~L~~L~L~~N~l~~~----~p~~~~~-l~~L~~L~L~ 214 (640)
.. ....+..++ +|++|+|++|+++..+. .+... ++|++|+|++|.|++. ++..+.. .++|++|+|+
T Consensus 156 ~~--l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls 233 (362)
T 3goz_A 156 DE--LIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLC 233 (362)
T ss_dssp HH--HHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECC
T ss_pred HH--HHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECc
Confidence 11 122333343 66666666666655322 12223 3566666666666542 2223333 2356666666
Q ss_pred CCCCCCC
Q 035691 215 GNSIRGS 221 (640)
Q Consensus 215 ~N~l~~~ 221 (640)
+|+|+..
T Consensus 234 ~N~l~~~ 240 (362)
T 3goz_A 234 LNCLHGP 240 (362)
T ss_dssp SSCCCCC
T ss_pred CCCCCcH
Confidence 6665543
No 325
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=1.1e-25 Score=229.62 Aligned_cols=203 Identities=23% Similarity=0.243 Sum_probs=134.7
Q ss_pred CCCCEEECcCCccCccCCccc--cCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcC-cCCCCC
Q 035691 105 SKLEWLDFANNSLTASIPEDL--GRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIP-ISVGYL 181 (640)
Q Consensus 105 ~~L~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip-~~~~~l 181 (640)
++|++|+|++|.+++..|..+ ..+++|++|+|++|+++..... + ....+..+++|++|++++|.++.++ ..+..+
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~-~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSW-L-AELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSS-H-HHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhh-h-HHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 456666666666666666555 5666666666666666542110 0 0012335666777777777776644 456667
Q ss_pred CCCCEEEccCCcCcc---cC-CcCccCCCCCCEEEccCCCCCCCCCc----cccCCCCccEEeccCccccCCCCCceEEc
Q 035691 182 PKLQVLSLFENNISG---EI-PSSLGNFTFLTELNLRGNSIRGSIPS----ALGNCHQLQSLDLSKTIFLGQYPVRWLDL 253 (640)
Q Consensus 182 ~~L~~L~L~~N~l~~---~~-p~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~ls~n~~~~~~~l~~L~L 253 (640)
++|++|+|++|++.+ .. +..+..+++|++|+|++|+++. ++. .++.+++|+.| +|
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L----------------~L 231 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSL----------------DL 231 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSE----------------EC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEE----------------EC
Confidence 777888888877654 22 2334677788888888888763 222 24566777666 77
Q ss_pred cCCcCCCCCCccCCCC---CCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCcc
Q 035691 254 SHNHLTGPIPLAVGNL---KSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTF 330 (640)
Q Consensus 254 s~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 330 (640)
++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|++
T Consensus 232 s~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l 306 (310)
T 4glp_A 232 SHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPF 306 (310)
T ss_dssp TTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTT
T ss_pred CCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCC
Confidence 7777777767666666 58888888888888 5666664 6888888888888864 32 67788888888888888
Q ss_pred c
Q 035691 331 Q 331 (640)
Q Consensus 331 ~ 331 (640)
+
T Consensus 307 ~ 307 (310)
T 4glp_A 307 L 307 (310)
T ss_dssp S
T ss_pred C
Confidence 7
No 326
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.92 E-value=1.9e-26 Score=235.58 Aligned_cols=182 Identities=24% Similarity=0.365 Sum_probs=141.3
Q ss_pred ccCHHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcC--CCCCcceeE
Q 035691 430 NVSYESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIR--HRNLVKIIT 505 (640)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~~ 505 (640)
.+.+.++....++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++ ||||+++++
T Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~ 95 (313)
T 3cek_A 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95 (313)
T ss_dssp ---CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEE
T ss_pred CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEE
Confidence 3444455556677999999999999999999986 68999999996443 334578999999999997 599999999
Q ss_pred eeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCC
Q 035691 506 ACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPS 585 (640)
Q Consensus 506 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~ 585 (640)
++. .....++||| +.+|+|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+
T Consensus 96 ~~~-----~~~~~~lv~e-~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~ 156 (313)
T 3cek_A 96 YEI-----TDQYIYMVME-CGNIDLNSWLKKKK----------SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPA 156 (313)
T ss_dssp EEE-----CSSEEEEEEC-CCSEEHHHHHHHCS----------SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGG
T ss_pred Eee-----cCCEEEEEEe-cCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcc
Confidence 954 3457899999 56789999986432 27888999999999999999999 69999999999
Q ss_pred CeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 586 NVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 586 NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
||++++ +.+||+|||+++.+...... .......||+.|+|||++.+
T Consensus 157 NIl~~~-~~~kL~Dfg~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~ 202 (313)
T 3cek_A 157 NFLIVD-GMLKLIDFGIANQMQPDTTS--VVKDSQVGTVNYMPPEAIKD 202 (313)
T ss_dssp GEEEET-TEEEECCCSSSCC----------------CCGGGCCHHHHTT
T ss_pred cEEEEC-CeEEEeeccccccccCcccc--ccccCCCCCCCcCCHHHHhh
Confidence 999964 89999999999876432211 11223468999999999876
No 327
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=9.5e-27 Score=242.82 Aligned_cols=255 Identities=17% Similarity=0.222 Sum_probs=193.6
Q ss_pred eEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCc----hhhcCCC-CCCeeeccCCcccccCCccCcCC-
Q 035691 31 YIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPP----YIGFTLP-NIRIPLLAGNQFFGNIPHSISNA- 104 (640)
Q Consensus 31 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l- 104 (640)
++.+++|.+++.+|..+...++|++|||++|.|+. .+. ..+..++ +|+.|+|++|+|++..+..|..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~------~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 75 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYS------ISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQIL 75 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGG------SCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHH
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCCh------HHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHH
Confidence 56899999999888877777789999999999875 554 4555687 89999999999998888888775
Q ss_pred ----CCCCEEECcCCccCccCCcc----ccCC-CCCCEEEcccCcCCCCCCCcccccccccC-CCCcceEecCCCCCCC-
Q 035691 105 ----SKLEWLDFANNSLTASIPED----LGRL-RNLTRLNFARNDLGTRKVNDLRFLDSLVN-CTYLEIVSLNVNSLRS- 173 (640)
Q Consensus 105 ----~~L~~L~Ls~N~l~~~~~~~----~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~l~~-l~~L~~L~L~~N~l~~- 173 (640)
++|++|+|++|++++..+.. +..+ ++|++|+|++|+|+..+...+ ...+.. .++|++|+|++|.++.
T Consensus 76 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l--~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 76 AAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEF--KQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp HTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH--HHHHTTSCTTCCEEECTTSCGGGS
T ss_pred hccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHH--HHHHHhCCCceeEEEccCCcCCHH
Confidence 99999999999999776664 4444 899999999999987643222 123444 3699999999999984
Q ss_pred ----cCcCCCCCC-CCCEEEccCCcCcccCCcCcc----CC-CCCCEEEccCCCCCCC----CCccccC-CCCccEEecc
Q 035691 174 ----IPISVGYLP-KLQVLSLFENNISGEIPSSLG----NF-TFLTELNLRGNSIRGS----IPSALGN-CHQLQSLDLS 238 (640)
Q Consensus 174 ----ip~~~~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~----~~~~~~~-l~~L~~L~ls 238 (640)
++..+..++ +|++|+|++|.|++..+..+. .+ ++|++|+|++|.|+.. ++..+.. .++|+.|
T Consensus 154 ~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L--- 230 (362)
T 3goz_A 154 SSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSL--- 230 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEE---
T ss_pred HHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEE---
Confidence 344444555 899999999999877765444 44 6999999999999863 3444554 3478777
Q ss_pred CccccCCCCCceEEccCCcCCCCCC----ccCCCCCCCCEEECCCCcccCc-------CCccccCCCCCCeEEecCCccC
Q 035691 239 KTIFLGQYPVRWLDLSHNHLTGPIP----LAVGNLKSIPHLDLSKNKLSGE-------IPSSLGSCVGLEYLNLSINSFH 307 (640)
Q Consensus 239 ~n~~~~~~~l~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~L~L~~N~l~ 307 (640)
+|++|.+++..+ ..+..+++|+.|+|++|.+.+. ++..+..+++|++||+++|++.
T Consensus 231 -------------~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 231 -------------NLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp -------------ECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred -------------ECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 666777765443 3456778888888888885433 2345677778888888888886
Q ss_pred CC
Q 035691 308 GP 309 (640)
Q Consensus 308 ~~ 309 (640)
..
T Consensus 298 ~~ 299 (362)
T 3goz_A 298 PS 299 (362)
T ss_dssp GG
T ss_pred Cc
Confidence 54
No 328
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.92 E-value=2.4e-26 Score=235.44 Aligned_cols=181 Identities=28% Similarity=0.365 Sum_probs=140.3
Q ss_pred HHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc--chhHHHHHHHHHHHHhcCCCCCcceeEeeccC
Q 035691 433 YESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--RGALKSFMAECEALRNIRHRNLVKIITACSSS 510 (640)
Q Consensus 433 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 510 (640)
.++.....++|++.+.||+|+||.||+|++.. .||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~- 100 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS- 100 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-
Confidence 34444556789999999999999999999863 39999986432 2334567889999999999999999999643
Q ss_pred CcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeC
Q 035691 511 DFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLD 590 (640)
Q Consensus 511 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~ 590 (640)
....++||||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++
T Consensus 101 ----~~~~~iv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~ 164 (319)
T 2y4i_B 101 ----PPHLAIITSLCKGRTLYSVVRDAK---------IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD 164 (319)
T ss_dssp ----SSCEEEECBCCCSEEHHHHTTSSC---------CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC
T ss_pred ----CCceEEEeecccCCcHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe
Confidence 346899999999999999996543 237788999999999999999999 6999999999999998
Q ss_pred CCCcEEEccccccccCCCccCC-CceeeccccccccccCcccCCC
Q 035691 591 NDMIAHVGDFGLTRFIPEVISS-NQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 591 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
++.+||+|||+++........ .........||+.|+|||++.+
T Consensus 165 -~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~ 208 (319)
T 2y4i_B 165 -NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208 (319)
T ss_dssp ---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSC
T ss_pred -CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhh
Confidence 679999999998765321111 1111223458999999999875
No 329
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.92 E-value=4.1e-27 Score=247.99 Aligned_cols=249 Identities=18% Similarity=0.207 Sum_probs=147.5
Q ss_pred CCchhhhcCCCCCeEEcccCccCccC----CcCCCCCCCCCEEEccCCCcCCccccccCCchhh------cCCCCCCeee
Q 035691 18 NIPHEIGRLFQLRYIIFNSNTLQGQI----PVNLTHCSELRTLDLVLNKLEENQLVGELPPYIG------FTLPNIRIPL 87 (640)
Q Consensus 18 ~~p~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~------~~l~~L~~L~ 87 (640)
.++..+..+++|++|+|++|.|+... +..|..+++|++|+|++|.+. .+.+.+|..+. ..+++|+.|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~--~l~~~~~~~~~~l~~~l~~~~~L~~L~ 100 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTG--RVKDEIPEALRLLLQALLKCPKLHTVR 100 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTT--SCGGGSHHHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccC--ccccchhHHHHHHHHHHhhCCcccEEE
Confidence 56778889999999999999998753 345788999999999988753 34555665552 3355555555
Q ss_pred ccCCcccc----cCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCC-----
Q 035691 88 LAGNQFFG----NIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNC----- 158 (640)
Q Consensus 88 L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l----- 158 (640)
|++|.|++ .+|..+..+++|++|+|++|.|+...+..+.. .+..+
T Consensus 101 Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------------~l~~l~~~~~ 154 (386)
T 2ca6_A 101 LSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--------------------------ALQELAVNKK 154 (386)
T ss_dssp CCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--------------------------HHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH--------------------------HHHHHhhhhh
Confidence 55555554 24444455555555555555554322222221 12222
Q ss_pred ----CCcceEecCCCCCCC--cC---cCCCCCCCCCEEEccCCcCcc-----cCCcCccCCCCCCEEEccCCCCC----C
Q 035691 159 ----TYLEIVSLNVNSLRS--IP---ISVGYLPKLQVLSLFENNISG-----EIPSSLGNFTFLTELNLRGNSIR----G 220 (640)
Q Consensus 159 ----~~L~~L~L~~N~l~~--ip---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~L~~N~l~----~ 220 (640)
++|++|++++|+++. +| ..+..+++|++|+|++|.|+. ..|..+..+++|+.|+|++|.|+ .
T Consensus 155 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~ 234 (386)
T 2ca6_A 155 AKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSS 234 (386)
T ss_dssp HHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHH
T ss_pred cccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHH
Confidence 444444444444431 22 233344556666666665551 23335566666666666666664 3
Q ss_pred CCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCC----CCccC--CCCCCCCEEECCCCcccC----cCCccc
Q 035691 221 SIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGP----IPLAV--GNLKSIPHLDLSKNKLSG----EIPSSL 290 (640)
Q Consensus 221 ~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~----~~~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~ 290 (640)
.+|..+..+++|+.| +|++|.+++. ++..+ +.+++|+.|+|++|++++ .+|..+
T Consensus 235 ~l~~~l~~~~~L~~L----------------~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 235 ALAIALKSWPNLREL----------------GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp HHHHHGGGCTTCCEE----------------ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred HHHHHHccCCCcCEE----------------ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 455556666666666 5555555433 34444 336777777777777775 366655
Q ss_pred -cCCCCCCeEEecCCccCCCC
Q 035691 291 -GSCVGLEYLNLSINSFHGPI 310 (640)
Q Consensus 291 -~~l~~L~~L~L~~N~l~~~~ 310 (640)
.++++|++|+|++|++++..
T Consensus 299 ~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 299 DEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHCTTCCEEECTTSBSCTTS
T ss_pred HhcCCCceEEEccCCcCCcch
Confidence 55677888888888877655
No 330
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.92 E-value=6.7e-26 Score=241.40 Aligned_cols=171 Identities=26% Similarity=0.364 Sum_probs=127.9
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhc-CCCCCcceeEeeccCCcCCCceee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNI-RHRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
.+|...++||+|+||+||.... .+|+.||||++..... ..+.+|+++++++ +|||||++++++ .+....+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~-----~~~~~~~ 94 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTE-----KDRQFQY 94 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEE-----EETTEEE
T ss_pred EEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCEEE
Confidence 4578889999999999654333 3789999999854332 2356899999999 899999999985 3455789
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC-----CCc
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN-----DMI 594 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~-----~~~ 594 (640)
+|||||+ |+|.+++...... ..+..+..++.||+.||+|||+ .+|+||||||+||+++. ...
T Consensus 95 lv~E~~~-g~L~~~l~~~~~~---------~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~ 161 (432)
T 3p23_A 95 IAIELCA-ATLQEYVEQKDFA---------HLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIK 161 (432)
T ss_dssp EEEECCS-EEHHHHHHSSSCC---------CCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCC
T ss_pred EEEECCC-CCHHHHHHhcCCC---------ccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCcee
Confidence 9999997 5999998654321 2223456899999999999999 69999999999999953 336
Q ss_pred EEEccccccccCCCccCCCceeeccccccccccCcccCCC
Q 035691 595 AHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 595 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 634 (640)
+||+|||+|+........ .......+||+.|+|||++.+
T Consensus 162 ~kL~DFG~a~~~~~~~~~-~~~~~~~~gt~~y~APE~l~~ 200 (432)
T 3p23_A 162 AMISDFGLCKKLAVGRHS-FSRRSGVPGTEGWIAPEMLSE 200 (432)
T ss_dssp EEECCTTEEECC-------------CCSCTTSCCGGGTSC
T ss_pred EEEecccceeeccCCCcc-eeeccccCCCcCccChhhhhc
Confidence 889999999876432211 122334679999999999974
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=3.2e-25 Score=226.14 Aligned_cols=226 Identities=15% Similarity=0.154 Sum_probs=181.6
Q ss_pred CCcEEeCCCCccccCCch---hhhcCCCCCeEEcccCccCccCCcCC--CCCCCCCEEEccCCCcCCccccccCC---ch
Q 035691 4 FLMLINLQQNNFSGNIPH---EIGRLFQLRYIIFNSNTLQGQIPVNL--THCSELRTLDLVLNKLEENQLVGELP---PY 75 (640)
Q Consensus 4 ~L~~L~L~~n~i~~~~p~---~~~~l~~L~~L~l~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~~~~lp---~~ 75 (640)
.++.|++.++.++...-. .+..+++|++|++++|.+++..|..+ ..+++|++|+|++|+++. ..+ ..
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-----~~~~~~~~ 139 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWAT-----GRSWLAEL 139 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSS-----TTSSHHHH
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccc-----hhhhhHHH
Confidence 467888888887642211 23346789999999999999999988 999999999999999874 222 12
Q ss_pred hhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCcc---C-CccccCCCCCCEEEcccCcCCCCCCCcccc
Q 035691 76 IGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTAS---I-PEDLGRLRNLTRLNFARNDLGTRKVNDLRF 151 (640)
Q Consensus 76 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 151 (640)
.+..+++|+.|+|++|++++..+..|.++++|++|||++|++.+. . +..+..+++|++|+|++|+++.++. .
T Consensus 140 ~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~----~ 215 (310)
T 4glp_A 140 QQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTG----V 215 (310)
T ss_dssp HTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHH----H
T ss_pred HhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHH----H
Confidence 233699999999999999999999999999999999999998752 2 3345789999999999999976532 1
Q ss_pred cc-cccCCCCcceEecCCCCCCCc-CcCCCCC---CCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccc
Q 035691 152 LD-SLVNCTYLEIVSLNVNSLRSI-PISVGYL---PKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSAL 226 (640)
Q Consensus 152 ~~-~l~~l~~L~~L~L~~N~l~~i-p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 226 (640)
+. .+.++++|++|+|++|+++.+ |..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +
T Consensus 216 ~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~ 290 (310)
T 4glp_A 216 CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-P 290 (310)
T ss_dssp HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-T
T ss_pred HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-h
Confidence 11 246889999999999999995 8777665 69999999999999 5677665 8999999999999965 33 6
Q ss_pred cCCCCccEEeccCcccc
Q 035691 227 GNCHQLQSLDLSKTIFL 243 (640)
Q Consensus 227 ~~l~~L~~L~ls~n~~~ 243 (640)
..+++|+.|++++|.+.
T Consensus 291 ~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 291 DELPEVDNLTLDGNPFL 307 (310)
T ss_dssp TSCCCCSCEECSSTTTS
T ss_pred hhCCCccEEECcCCCCC
Confidence 88899999955555443
No 332
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.92 E-value=1.3e-25 Score=229.87 Aligned_cols=171 Identities=22% Similarity=0.259 Sum_probs=123.7
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccch--hHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCce
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRG--ALKSFMAECEALRNIRHRNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~~ 517 (640)
.++|+..+.||+|+||.||+|+++.+|+.||||++...... ..+.+.++..+++.++||||+++++++. ..+.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-----~~~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI-----TNTD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSSE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe-----cCCc
Confidence 35678889999999999999999989999999999654322 2234445556788889999999999964 3457
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeeCCCCCCCeeeCCCCcEE
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKK-QIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~-~ivHrdlkp~NiLl~~~~~~k 596 (640)
.++||||+ ++.+..+..... ..+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+|
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~k 165 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQ---------GPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIK 165 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHT---------SCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEE
T ss_pred EEEEEecc-CCcHHHHHHHhc---------cCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEE
Confidence 89999999 445554443211 237889999999999999999998 4 899999999999999999999
Q ss_pred EccccccccCCCccCCCceeeccccccccccCcccCC
Q 035691 597 VGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYGM 633 (640)
Q Consensus 597 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 633 (640)
|+|||+++...... ......||+.|+|||++.
T Consensus 166 l~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~ 197 (318)
T 2dyl_A 166 LCDFGISGRLVDDK-----AKDRSAGCAAYMAPERID 197 (318)
T ss_dssp ECCCTTC-------------------CCTTCCHHHHC
T ss_pred EEECCCchhccCCc-----cccccCCCccccChhhcc
Confidence 99999997654321 112345899999999985
No 333
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.92 E-value=2e-24 Score=219.75 Aligned_cols=171 Identities=23% Similarity=0.339 Sum_probs=76.0
Q ss_pred cCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCC
Q 035691 102 SNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYL 181 (640)
Q Consensus 102 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l 181 (640)
..+++|++|+|++|++++..+ +..+++|++|+|++|+++.+ ..+..+++|+.|++++|+++.+|. +..+
T Consensus 60 ~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--------~~~~~l~~L~~L~l~~n~l~~~~~-l~~l 128 (308)
T 1h6u_A 60 QYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--------SAIAGLQSIKTLDLTSTQITDVTP-LAGL 128 (308)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--------GGGTTCTTCCEEECTTSCCCCCGG-GTTC
T ss_pred hccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--------hhhcCCCCCCEEECCCCCCCCchh-hcCC
Confidence 334444444444444443222 44444444444444444332 123334444444444444444332 3444
Q ss_pred CCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCC
Q 035691 182 PKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGP 261 (640)
Q Consensus 182 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~ 261 (640)
++|++|++++|.+++..+ +..+++|++|+|++|++++..+ +..+++|+.| ++++|++++.
T Consensus 129 ~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L----------------~l~~n~l~~~ 188 (308)
T 1h6u_A 129 SNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTL----------------KADDNKISDI 188 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE----------------ECCSSCCCCC
T ss_pred CCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEE----------------ECCCCccCcC
Confidence 445555555555443222 4444555555555555543222 4444444444 4444444432
Q ss_pred CCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccC
Q 035691 262 IPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFH 307 (640)
Q Consensus 262 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 307 (640)
.+ +..+++|+.|+|++|++++.. .+..+++|++|+|++|+++
T Consensus 189 ~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 189 SP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp GG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred hh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 22 444555555555555555332 2445555555555555554
No 334
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.92 E-value=3.6e-24 Score=217.87 Aligned_cols=198 Identities=23% Similarity=0.290 Sum_probs=113.1
Q ss_pred eCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeec
Q 035691 9 NLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLL 88 (640)
Q Consensus 9 ~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L 88 (640)
.+..+.+++..+ +..+++|++|++++|.++. +| .+..+++|++|+|++|++++ +++ +..+++|+.|+|
T Consensus 25 ~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~------~~~--~~~l~~L~~L~L 92 (308)
T 1h6u_A 25 AAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD------LAP--LKNLTKITELEL 92 (308)
T ss_dssp HTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC------CGG--GTTCCSCCEEEC
T ss_pred HhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC------Chh--HccCCCCCEEEc
Confidence 344444443322 4456666677777776663 33 46666667777776666654 443 344666666666
Q ss_pred cCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCC
Q 035691 89 AGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNV 168 (640)
Q Consensus 89 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~ 168 (640)
++|++++. ..|..+++|++|+|++|++++. +. +..+++|++|+|++|+++.++ .+..+++|+.|++++
T Consensus 93 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~--------~l~~l~~L~~L~l~~ 160 (308)
T 1h6u_A 93 SGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNIS--------PLAGLTNLQYLSIGN 160 (308)
T ss_dssp CSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCG--------GGGGCTTCCEEECCS
T ss_pred cCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCc--------cccCCCCccEEEccC
Confidence 66666643 2466666666666666666643 22 566666666666666665542 145556666666666
Q ss_pred CCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEE
Q 035691 169 NSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSL 235 (640)
Q Consensus 169 N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 235 (640)
|.++.++. +..+++|++|++++|.+++..+ +..+++|++|+|++|++++..+ +..+++|+.|
T Consensus 161 n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 222 (308)
T 1h6u_A 161 AQVSDLTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222 (308)
T ss_dssp SCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEE
T ss_pred CcCCCChh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEE
Confidence 66665544 5555666666666666654332 5555666666666666654332 4555555555
No 335
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.91 E-value=4.2e-27 Score=262.31 Aligned_cols=340 Identities=11% Similarity=0.075 Sum_probs=202.6
Q ss_pred CCcEEeCCCCc-ccc-CCchhhhcCCCCCeEEcccCccCcc----CCcCCCCCCCCCEEEccCCCcCCccccccCCchhh
Q 035691 4 FLMLINLQQNN-FSG-NIPHEIGRLFQLRYIIFNSNTLQGQ----IPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIG 77 (640)
Q Consensus 4 ~L~~L~L~~n~-i~~-~~p~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~ 77 (640)
+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+..+++|++|+|++|.++.... +.++. ++
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~-~~l~~-~~ 216 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISP-KDLET-IA 216 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCH-HHHHH-HH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCH-HHHHH-HH
Confidence 38888888886 321 1223345788888888888887654 23344577888888888888763111 11222 23
Q ss_pred cCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccC---ccCCccccCCCCCCEEEcccCcCCCCCCCccccccc
Q 035691 78 FTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLT---ASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDS 154 (640)
Q Consensus 78 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 154 (640)
..+++|+.|+|++|.+.+ +|..+.++++|++|+++.+... ...+..+..+++|+.|+++++.... .+..
T Consensus 217 ~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~-------l~~~ 288 (592)
T 3ogk_B 217 RNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNE-------MPIL 288 (592)
T ss_dssp HHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTT-------GGGG
T ss_pred hhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhH-------HHHH
Confidence 357888888888888876 5577788888888888754332 2233456677777777777754333 2344
Q ss_pred ccCCCCcceEecCCCCCCC--cCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEcc-----------CCCCCCC
Q 035691 155 LVNCTYLEIVSLNVNSLRS--IPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLR-----------GNSIRGS 221 (640)
Q Consensus 155 l~~l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~-----------~N~l~~~ 221 (640)
+..+++|++|++++|.++. ++..+..+++|++|+++++-..+.++..+..+++|++|+|+ .|.++..
T Consensus 289 ~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~ 368 (592)
T 3ogk_B 289 FPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR 368 (592)
T ss_dssp GGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH
T ss_pred HhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH
Confidence 5567777777777777654 22234567777777777332222233334556777777777 2455432
Q ss_pred C-CccccCCCCccEEeccCccccC---------CCCCceEEcc----CCcCCCC-----CCccCCCCCCCCEEECCCC--
Q 035691 222 I-PSALGNCHQLQSLDLSKTIFLG---------QYPVRWLDLS----HNHLTGP-----IPLAVGNLKSIPHLDLSKN-- 280 (640)
Q Consensus 222 ~-~~~~~~l~~L~~L~ls~n~~~~---------~~~l~~L~Ls----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N-- 280 (640)
. +..+..+++|+.|+++.|.+.+ ...|+.|+++ .|.+++. ++..+.++++|+.|+|+++
T Consensus 369 ~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~ 448 (592)
T 3ogk_B 369 GLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQG 448 (592)
T ss_dssp HHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGG
T ss_pred HHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 1 1223456777777776555432 4457777775 5666643 2223555677777777643
Q ss_pred cccCcCCcccc-CCCCCCeEEecCCccCC-CCCccCCCCCCCCeEeCcCCccccccCCcccCCC-CCCCCCccccccCCC
Q 035691 281 KLSGEIPSSLG-SCVGLEYLNLSINSFHG-PIHPGLSSLKSLEGLDLFQNTFQAKSQNGDVPRK-GIFKNASAISVAGNE 357 (640)
Q Consensus 281 ~l~~~~p~~~~-~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~p~~-~~~~~~~~~~~~~n~ 357 (640)
.+++..+..+. .+++|++|+|++|.+++ .++..+.++++|++|+|++|+++.. .++.. ..+++++.+++++|.
T Consensus 449 ~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~----~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 449 GLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER----AIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp GCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH----HHHHHHHHCSSCCEEEEESCB
T ss_pred CccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH----HHHHHHHhcCccCeeECcCCc
Confidence 24444333333 35667777777777654 2334456667777777777765421 11111 224556666666665
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.5e-23 Score=206.77 Aligned_cols=158 Identities=23% Similarity=0.278 Sum_probs=120.7
Q ss_pred CcceEecCCCCCCCcC-cCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEecc
Q 035691 160 YLEIVSLNVNSLRSIP-ISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLS 238 (640)
Q Consensus 160 ~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 238 (640)
.++.|++++|.++.++ ..+..+++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L--- 112 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKL--- 112 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE---
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEE---
Confidence 3445555555555533 245666777777777777777777777777888888888888877777777777777777
Q ss_pred CccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCC
Q 035691 239 KTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLK 318 (640)
Q Consensus 239 ~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 318 (640)
+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++..+..|..++
T Consensus 113 -------------~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 179 (251)
T 3m19_A 113 -------------YLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLG 179 (251)
T ss_dssp -------------ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred -------------EcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCC
Confidence 7777777777777788888888888888888877666788888888888888888887777888888
Q ss_pred CCCeEeCcCCccccc
Q 035691 319 SLEGLDLFQNTFQAK 333 (640)
Q Consensus 319 ~L~~L~l~~N~l~~~ 333 (640)
+|++|+|++|+|.|.
T Consensus 180 ~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 180 KLQTITLFGNQFDCS 194 (251)
T ss_dssp TCCEEECCSCCBCTT
T ss_pred CCCEEEeeCCceeCC
Confidence 888888888888875
No 337
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=3.6e-24 Score=222.16 Aligned_cols=220 Identities=19% Similarity=0.103 Sum_probs=120.1
Q ss_pred CCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccC-CccccCCCCCCE-EEcccCcCCCCCCCcccccccccCCC
Q 035691 82 NIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASI-PEDLGRLRNLTR-LNFARNDLGTRKVNDLRFLDSLVNCT 159 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~~~~l~~l~ 159 (640)
+++.|+|++|+|+.+.+++|.++++|++|+|++|++.+.+ +.+|.++++|.+ +.+++|+|+.+ .++.|.+++
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l------~~~~f~~l~ 104 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYI------NPEAFQNLP 104 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEE------CTTSBCCCT
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCccccc------Cchhhhhcc
Confidence 3444444444444444444444444444444444443222 234444444432 33344444443 223344444
Q ss_pred CcceEecCCCCCCCcCc-CCCCCCCCCEEEccC-CcCcccCCcCccCCC-CCCEEEccCCCCCCCCCccccCCCCccEEe
Q 035691 160 YLEIVSLNVNSLRSIPI-SVGYLPKLQVLSLFE-NNISGEIPSSLGNFT-FLTELNLRGNSIRGSIPSALGNCHQLQSLD 236 (640)
Q Consensus 160 ~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 236 (640)
+|++|++++|+++.+|. .+....++..|++.+ |.+..+.+..|..+. .++.|+|++|+|+.+.+..| ...+|+.|
T Consensus 105 ~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l- 182 (350)
T 4ay9_X 105 NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDEL- 182 (350)
T ss_dssp TCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEE-
T ss_pred ccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHH-
Confidence 45555555555544433 223344566666644 566655566666654 57778888888875544444 34456666
Q ss_pred ccCccccCCCCCceEEcc-CCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCC
Q 035691 237 LSKTIFLGQYPVRWLDLS-HNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLS 315 (640)
Q Consensus 237 ls~n~~~~~~~l~~L~Ls-~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 315 (640)
+++ +|.++.+.+..|.++++|+.|||++|+|+...+..|.+ |+.|.+.++.--..+| .+.
T Consensus 183 ---------------~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~~lP-~l~ 243 (350)
T 4ay9_X 183 ---------------NLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLKKLP-TLE 243 (350)
T ss_dssp ---------------ECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCCCCC-CTT
T ss_pred ---------------hhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcCcCC-Cch
Confidence 554 36666555667888888888888888888554444444 4444444433223455 477
Q ss_pred CCCCCCeEeCcCC
Q 035691 316 SLKSLEGLDLFQN 328 (640)
Q Consensus 316 ~l~~L~~L~l~~N 328 (640)
++++|+.++++++
T Consensus 244 ~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 244 KLVALMEASLTYP 256 (350)
T ss_dssp TCCSCCEEECSCH
T ss_pred hCcChhhCcCCCC
Confidence 8888888888643
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.9e-25 Score=230.54 Aligned_cols=253 Identities=18% Similarity=0.255 Sum_probs=136.6
Q ss_pred CcEEeCCCCccccCCchhhhcC--CCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 5 LMLINLQQNNFSGNIPHEIGRL--FQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 5 L~~L~L~~n~i~~~~p~~~~~l--~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
++.+|+++|.+. |..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~------------------ 106 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIE------------------ 106 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEEC------------------
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcC------------------
Confidence 556666666655 4455555 5666666666666644443 345566666666655443
Q ss_pred CCeeeccCCccccc-CCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccC-cCCCCCCCcccccccccCCCC
Q 035691 83 IRIPLLAGNQFFGN-IPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARN-DLGTRKVNDLRFLDSLVNCTY 160 (640)
Q Consensus 83 L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~l~~l~~ 160 (640)
+. ++..+..+++|++|+|++|++++..+..+..+++|++|+|++| .++... .+..+.++++
T Consensus 107 ------------~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~-----l~~~~~~~~~ 169 (336)
T 2ast_B 107 ------------VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFA-----LQTLLSSCSR 169 (336)
T ss_dssp ------------HHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHH-----HHHHHHHCTT
T ss_pred ------------HHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHH-----HHHHHhcCCC
Confidence 22 3333444444444444444444444444444444444444444 333210 1122344445
Q ss_pred cceEecCCC-CCCC--cCcCCCCCC-CCCEEEccCC--cCc-ccCCcCccCCCCCCEEEccCCC-CCCCCCccccCCCCc
Q 035691 161 LEIVSLNVN-SLRS--IPISVGYLP-KLQVLSLFEN--NIS-GEIPSSLGNFTFLTELNLRGNS-IRGSIPSALGNCHQL 232 (640)
Q Consensus 161 L~~L~L~~N-~l~~--ip~~~~~l~-~L~~L~L~~N--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L 232 (640)
|++|++++| .++. ++..+..++ +|++|++++| .++ +.+|..+..+++|++|+|++|. +++..+..+..+++|
T Consensus 170 L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L 249 (336)
T 2ast_B 170 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYL 249 (336)
T ss_dssp CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred CCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCC
Confidence 555555555 4443 333444455 6666666666 333 2344555666677777777776 555555566666666
Q ss_pred cEEeccCccccCCCCCceEEccCCc-CCCCCCccCCCCCCCCEEECCCCcccCcCCccccCC-CCCCeEEecCCccCCCC
Q 035691 233 QSLDLSKTIFLGQYPVRWLDLSHNH-LTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSC-VGLEYLNLSINSFHGPI 310 (640)
Q Consensus 233 ~~L~ls~n~~~~~~~l~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~ 310 (640)
+.| ++++|. ++......+..+++|+.|++++| ++. ..+..+ ..|+.|++++|++++..
T Consensus 250 ~~L----------------~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~ 309 (336)
T 2ast_B 250 QHL----------------SLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIA 309 (336)
T ss_dssp CEE----------------ECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTT
T ss_pred CEe----------------eCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCcccc
Confidence 666 444443 21111124667778888888877 332 233333 24677778888888887
Q ss_pred CccCCC
Q 035691 311 HPGLSS 316 (640)
Q Consensus 311 ~~~~~~ 316 (640)
|..+..
T Consensus 310 ~~~~~~ 315 (336)
T 2ast_B 310 RPTIGN 315 (336)
T ss_dssp CSSCSS
T ss_pred CCcccc
Confidence 777664
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=1.6e-26 Score=243.46 Aligned_cols=235 Identities=23% Similarity=0.358 Sum_probs=171.9
Q ss_pred CCCCCeeeccCCcccccCC----ccCcCCCCCCEEECcCCc---cCccCCccc-------cCCCCCCEEEcccCcCCCCC
Q 035691 80 LPNIRIPLLAGNQFFGNIP----HSISNASKLEWLDFANNS---LTASIPEDL-------GRLRNLTRLNFARNDLGTRK 145 (640)
Q Consensus 80 l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~---l~~~~~~~~-------~~l~~L~~L~L~~N~l~~~~ 145 (640)
+++|+.|+|++|+|+...+ ..|..+++|++|+|++|. +++.+|..+ ..+++|++|+|++|.++...
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 4555555555555554422 335567777777777753 334444443 57777888888888776531
Q ss_pred CCcccccccccCCCCcceEecCCCCCCC-----cCcCCCCC---------CCCCEEEccCCcCc-ccCC---cCccCCCC
Q 035691 146 VNDLRFLDSLVNCTYLEIVSLNVNSLRS-----IPISVGYL---------PKLQVLSLFENNIS-GEIP---SSLGNFTF 207 (640)
Q Consensus 146 ~~~~~~~~~l~~l~~L~~L~L~~N~l~~-----ip~~~~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~ 207 (640)
.. ..+..+..+++|++|+|++|.++. ++..+..+ ++|++|+|++|.|+ +.+| ..+..+++
T Consensus 111 ~~--~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 188 (386)
T 2ca6_A 111 QE--PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL 188 (386)
T ss_dssp HH--HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTT
T ss_pred HH--HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCC
Confidence 11 133456677788888888888764 22223333 89999999999997 3444 46778899
Q ss_pred CCEEEccCCCCCC-----CCCccccCCCCccEEeccCccccCCCCCceEEccCCcCC----CCCCccCCCCCCCCEEECC
Q 035691 208 LTELNLRGNSIRG-----SIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLT----GPIPLAVGNLKSIPHLDLS 278 (640)
Q Consensus 208 L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~Ls 278 (640)
|++|+|++|+|+. ..|..+..+++|+.| +|++|.++ +.+|..+..+++|+.|+|+
T Consensus 189 L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L----------------~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 189 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVL----------------DLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp CCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEE----------------ECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cCEEECcCCCCCHhHHHHHHHHHhhcCCCccEE----------------ECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 9999999999982 345578888899888 77778875 4677889999999999999
Q ss_pred CCcccCc----CCcccc--CCCCCCeEEecCCccCC----CCCccC-CCCCCCCeEeCcCCcccc
Q 035691 279 KNKLSGE----IPSSLG--SCVGLEYLNLSINSFHG----PIHPGL-SSLKSLEGLDLFQNTFQA 332 (640)
Q Consensus 279 ~N~l~~~----~p~~~~--~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~l~~N~l~~ 332 (640)
+|+|++. +|..+. .+++|++|+|++|.+++ .+|..+ .++++|++|++++|+++.
T Consensus 253 ~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 253 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred CCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 9999865 466663 48999999999999997 477766 678999999999999984
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=3.5e-23 Score=204.16 Aligned_cols=179 Identities=23% Similarity=0.262 Sum_probs=111.7
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcc
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLE 162 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 162 (640)
.+.++++++.++. +|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.|+.++
T Consensus 16 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~----------------- 75 (251)
T 3m19_A 16 KKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS----------------- 75 (251)
T ss_dssp GTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC-----------------
T ss_pred CeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC-----------------
Confidence 4455555555553 233332 35555555555555555555555555555555555554431
Q ss_pred eEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccc
Q 035691 163 IVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIF 242 (640)
Q Consensus 163 ~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~ 242 (640)
|..+..+++|++|+|++|.|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|
T Consensus 76 ------------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L------- 136 (251)
T 3m19_A 76 ------------AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL------- 136 (251)
T ss_dssp ------------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE-------
T ss_pred ------------HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEE-------
Confidence 2234556666666666666666666666677777777777777776666666666666666
Q ss_pred cCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCC
Q 035691 243 LGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGP 309 (640)
Q Consensus 243 ~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 309 (640)
+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++.
T Consensus 137 ---------~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 137 ---------RLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ---------ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ---------ECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 6666677666666777777777777777777766666777777777777777777653
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.2e-25 Score=232.14 Aligned_cols=245 Identities=19% Similarity=0.222 Sum_probs=199.4
Q ss_pred CCCCEEEccCCCcCCccccccCCchhhcCC--CCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCcc-CCccccC
Q 035691 51 SELRTLDLVLNKLEENQLVGELPPYIGFTL--PNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTAS-IPEDLGR 127 (640)
Q Consensus 51 ~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~ 127 (640)
..++.||+++|.+.. ..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. .+..+..
T Consensus 47 ~~~~~l~l~~~~~~~---------~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~ 116 (336)
T 2ast_B 47 SLWQTLDLTGKNLHP---------DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQ 116 (336)
T ss_dssp TTSSEEECTTCBCCH---------HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTT
T ss_pred hhheeeccccccCCH---------HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhh
Confidence 348899999887652 222334 8899999999999988776 45799999999999999876 7888999
Q ss_pred CCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCC-CCCC--cCcCCCCCCCCCEEEccCC-cCccc-CCcCc
Q 035691 128 LRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVN-SLRS--IPISVGYLPKLQVLSLFEN-NISGE-IPSSL 202 (640)
Q Consensus 128 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N-~l~~--ip~~~~~l~~L~~L~L~~N-~l~~~-~p~~~ 202 (640)
+++|++|+|++|.++.. .+..+..+++|++|++++| .++. ++..+..+++|++|++++| .+++. ++..+
T Consensus 117 ~~~L~~L~L~~~~l~~~------~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~ 190 (336)
T 2ast_B 117 CSKLQNLSLEGLRLSDP------IVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV 190 (336)
T ss_dssp BCCCSEEECTTCBCCHH------HHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH
T ss_pred CCCCCEEeCcCcccCHH------HHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH
Confidence 99999999999998764 5567888999999999999 7874 6766778899999999999 99864 57778
Q ss_pred cCCC-CCCEEEccCC--CCC-CCCCccccCCCCccEEeccCccccCCCCCceEEccCCc-CCCCCCccCCCCCCCCEEEC
Q 035691 203 GNFT-FLTELNLRGN--SIR-GSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNH-LTGPIPLAVGNLKSIPHLDL 277 (640)
Q Consensus 203 ~~l~-~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L 277 (640)
..++ +|++|+|++| .++ +.+|..+..+++|+.| ++++|. +++..+..+..+++|+.|++
T Consensus 191 ~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L----------------~l~~~~~l~~~~~~~l~~l~~L~~L~l 254 (336)
T 2ast_B 191 AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL----------------DLSDSVMLKNDCFQEFFQLNYLQHLSL 254 (336)
T ss_dssp HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE----------------ECTTCTTCCGGGGGGGGGCTTCCEEEC
T ss_pred HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE----------------eCCCCCcCCHHHHHHHhCCCCCCEeeC
Confidence 8899 9999999999 455 4556677888899888 777777 67677788999999999999
Q ss_pred CCCc-ccCcCCccccCCCCCCeEEecCCccCCCCCccCCCC-CCCCeEeCcCCccc
Q 035691 278 SKNK-LSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSL-KSLEGLDLFQNTFQ 331 (640)
Q Consensus 278 s~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~ 331 (640)
++|. +.......+..+++|++|++++| ++ ...+..+ ..++.|++++|.++
T Consensus 255 ~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~ 306 (336)
T 2ast_B 255 SRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFT 306 (336)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSC
T ss_pred CCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCc
Confidence 9995 33222236888999999999999 43 3344444 34788889999999
No 342
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=8.4e-25 Score=238.82 Aligned_cols=161 Identities=17% Similarity=0.134 Sum_probs=118.3
Q ss_pred cccCcccccccceEEEEEECCCCeEEEEEEeeccc--------chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCC
Q 035691 444 SSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ--------RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 444 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~ 515 (640)
...+.||+|+||.||+|.. .++.+|+|+..... ....+.+.+|++++++++||||+++..++.. .
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-----~ 411 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-----L 411 (540)
T ss_dssp ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-----T
T ss_pred CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-----C
Confidence 3457899999999999954 57889999863321 1123568999999999999999955444322 2
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcE
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIA 595 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~ 595 (640)
+..++||||+++|+|.+++.. +..++.|++.||+|||+ .+|+||||||+|||++. .+
T Consensus 412 ~~~~lVmE~~~ggsL~~~l~~------------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~ 468 (540)
T 3en9_A 412 DNKRIMMSYINGKLAKDVIED------------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DL 468 (540)
T ss_dssp TTTEEEEECCCSEEHHHHSTT------------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SE
T ss_pred CccEEEEECCCCCCHHHHHHH------------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eE
Confidence 345899999999999999864 34689999999999999 69999999999999998 99
Q ss_pred EEccccccccCCCccCCC---ceeeccccccccccCcccCCC
Q 035691 596 HVGDFGLTRFIPEVISSN---QCSSVGLKGTVGYAAPEYGMG 634 (640)
Q Consensus 596 kl~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~ 634 (640)
||+|||+|+......... .......+||+.|||||++.+
T Consensus 469 kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~ 510 (540)
T 3en9_A 469 YIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWER 510 (540)
T ss_dssp EECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred EEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence 999999999764321100 001234679999999999854
No 343
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.90 E-value=6.9e-24 Score=213.40 Aligned_cols=145 Identities=14% Similarity=0.098 Sum_probs=125.8
Q ss_pred cCCCcccCcccccccceEEEEEECCCCeEEEEEEeeccc---chhHHHHHHHHHHHHhcCCCCCcceeEeeccCCcCCCc
Q 035691 440 TGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQ---RGALKSFMAECEALRNIRHRNLVKIITACSSSDFQGND 516 (640)
Q Consensus 440 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~~~ 516 (640)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++. ..+
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~~ 104 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH-----TRA 104 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETT
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE-----ECC
Confidence 367999999999999999999999899999999996543 233478999999999999999999999954 345
Q ss_pred eeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEE
Q 035691 517 FKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAH 596 (640)
Q Consensus 517 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~k 596 (640)
..|+||||+++++|.+++... .....+..|+.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 105 ~~~lv~e~~~g~~L~~~l~~~------------~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~k 169 (286)
T 3uqc_A 105 GGLVVAEWIRGGSLQEVADTS------------PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVV 169 (286)
T ss_dssp EEEEEEECCCEEEHHHHHTTC------------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEE
T ss_pred cEEEEEEecCCCCHHHHHhcC------------CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEE
Confidence 789999999999999998532 2344678899999999999999 6999999999999999999999
Q ss_pred Eccccccc
Q 035691 597 VGDFGLTR 604 (640)
Q Consensus 597 l~DfGla~ 604 (640)
|+++|...
T Consensus 170 l~~~~~~~ 177 (286)
T 3uqc_A 170 LAYPATMP 177 (286)
T ss_dssp ECSCCCCT
T ss_pred EEeccccC
Confidence 99887654
No 344
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.90 E-value=2e-26 Score=256.94 Aligned_cols=270 Identities=13% Similarity=0.094 Sum_probs=128.4
Q ss_pred CCCCCeeeccCCccc----ccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccc
Q 035691 80 LPNIRIPLLAGNQFF----GNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSL 155 (640)
Q Consensus 80 l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l 155 (640)
+++|+.|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..+..+++|++|+++.+...... ......+
T Consensus 191 ~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~---~~~~~~l 266 (592)
T 3ogk_B 191 NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM---PEKYMNL 266 (592)
T ss_dssp CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC---TTSSSCC
T ss_pred CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccch---HHHHHHh
Confidence 445555555555444 1222233344455555555555443 3344444555555555432211000 0012334
Q ss_pred cCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCC-cCccCCCCCCEEEccCCCCCCCCCccccCCCCccE
Q 035691 156 VNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIP-SSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQS 234 (640)
Q Consensus 156 ~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 234 (640)
..+++|+.|+++++....+|..+..+++|++|+|++|.+++... ..+..+++|++|+++++...+.++..+..+++|+.
T Consensus 267 ~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCE
T ss_pred hccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCE
Confidence 45555555555555444455555555566666666666543222 22455566666666622222222233345566666
Q ss_pred EeccC-----------cccc---------CCCCCceEEccCCcCCCCCCccCCC-CCCCCEEECC----CCcccCc----
Q 035691 235 LDLSK-----------TIFL---------GQYPVRWLDLSHNHLTGPIPLAVGN-LKSIPHLDLS----KNKLSGE---- 285 (640)
Q Consensus 235 L~ls~-----------n~~~---------~~~~l~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~---- 285 (640)
|++++ |.+. +...|++|+++.|++++..+..+.. +++|+.|+++ .|.+++.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 66662 2222 2345666666666665544444443 5666666664 5556542
Q ss_pred -CCccccCCCCCCeEEecCCc--cCCCCCccCC-CCCCCCeEeCcCCccccccCCcccCCC-CCCCCCccccccCCC
Q 035691 286 -IPSSLGSCVGLEYLNLSINS--FHGPIHPGLS-SLKSLEGLDLFQNTFQAKSQNGDVPRK-GIFKNASAISVAGNE 357 (640)
Q Consensus 286 -~p~~~~~l~~L~~L~L~~N~--l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~p~~-~~~~~~~~~~~~~n~ 357 (640)
++..+.++++|++|+|++|. +++..+..+. .+++|++|++++|.++.. .++.. ..+++++.+++.+|+
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~----~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE----GLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH----HHHHHHTCCTTCCEEEEESCC
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH----HHHHHHhcCcccCeeeccCCC
Confidence 22234456666666665332 4433222222 256666666666665521 11111 223455666666654
No 345
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.90 E-value=1.7e-24 Score=229.69 Aligned_cols=177 Identities=20% Similarity=0.229 Sum_probs=126.8
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc---hhHHHHHHHHHHHHhcCC-CCCcce---------eEee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR---GALKSFMAECEALRNIRH-RNLVKI---------ITAC 507 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H-~niv~l---------~~~~ 507 (640)
..|...+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+.+++.++| ++.... ...+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 346677899999999999999999999999999863332 235789999999999987 221111 1111
Q ss_pred c------------cCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 035691 508 S------------SSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKK 575 (640)
Q Consensus 508 ~------------~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~ 575 (640)
. ..........+++|+++ +|+|.+++....... .....+++..++.++.|++.||+|||+ .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~---~ 230 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS---STHKSLVHHARLQLTLQVIRLLASLHH---Y 230 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHT---TTSHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhccc---ccCCCCCHHHHHHHHHHHHHHHHHHHh---C
Confidence 0 00000112356677755 679998884110000 001337788899999999999999999 6
Q ss_pred CeeeCCCCCCCeeeCCCCcEEEccccccccCCCccCCCceeeccccccccccCcccC
Q 035691 576 QIVHCDLKPSNVLLDNDMIAHVGDFGLTRFIPEVISSNQCSSVGLKGTVGYAAPEYG 632 (640)
Q Consensus 576 ~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 632 (640)
+|+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++
T Consensus 231 ~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~ 279 (413)
T 3dzo_A 231 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-------AVSPIG-RGFAPPETT 279 (413)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-------ECCCCC-TTTCCHHHH
T ss_pred CcccCCcccceEEEecCCeEEEEeccceeecCCc-------cccCCC-CceeCchhh
Confidence 9999999999999999999999999999865322 233467 999999998
No 346
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.89 E-value=1.9e-23 Score=211.88 Aligned_cols=150 Identities=23% Similarity=0.360 Sum_probs=126.7
Q ss_pred CCCccc-CcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHH-HhcCCCCCcceeEeeccCCcCCCcee
Q 035691 441 GGFSSA-NLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEAL-RNIRHRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~~~~~ 518 (640)
++|.+. +.||+|+||.||+|++..+++.||+|++... ..+.+|+.++ +..+||||+++++++... +......
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCceE
Confidence 446665 7899999999999999999999999998532 4567888888 556999999999986432 1235578
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCC---CCcE
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDN---DMIA 595 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~---~~~~ 595 (640)
++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++. ++.+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~ 159 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGD--------QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAIL 159 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTT--------CCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCE
T ss_pred EEEEeecCCCcHHHHHHhccC--------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcE
Confidence 999999999999999975432 238899999999999999999999 69999999999999998 7899
Q ss_pred EEccccccccCC
Q 035691 596 HVGDFGLTRFIP 607 (640)
Q Consensus 596 kl~DfGla~~~~ 607 (640)
||+|||+++...
T Consensus 160 kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 160 KLTDFGFAKETT 171 (299)
T ss_dssp EECCCTTCEECT
T ss_pred EEeccccccccc
Confidence 999999998654
No 347
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=3.3e-23 Score=207.41 Aligned_cols=142 Identities=19% Similarity=0.194 Sum_probs=114.3
Q ss_pred HHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc------------------hhHHHHHHHHHHHHh
Q 035691 433 YESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR------------------GALKSFMAECEALRN 494 (640)
Q Consensus 433 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~ 494 (640)
...+......|++.+.||+|+||.||+|++ .+|+.||||+++.... .....+.+|++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 445566667788889999999999999999 6899999999953221 134678999999999
Q ss_pred cCCCCCcceeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 035691 495 IRHRNLVKIITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHCK 574 (640)
Q Consensus 495 l~H~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~~ 574 (640)
++| +++.+++. .+..++||||+++|+|.+ +... ....++.|++.||+|||+
T Consensus 161 l~~---~~v~~~~~------~~~~~lvmE~~~g~~L~~-l~~~----------------~~~~i~~qi~~~l~~lH~--- 211 (282)
T 1zar_A 161 LQG---LAVPKVYA------WEGNAVLMELIDAKELYR-VRVE----------------NPDEVLDMILEEVAKFYH--- 211 (282)
T ss_dssp TTT---SSSCCEEE------EETTEEEEECCCCEEGGG-CCCS----------------CHHHHHHHHHHHHHHHHH---
T ss_pred ccC---CCcCeEEe------ccceEEEEEecCCCcHHH-cchh----------------hHHHHHHHHHHHHHHHHH---
Confidence 994 55555431 134689999999999998 4211 134699999999999999
Q ss_pred CCeeeCCCCCCCeeeCCCCcEEEcccccccc
Q 035691 575 KQIVHCDLKPSNVLLDNDMIAHVGDFGLTRF 605 (640)
Q Consensus 575 ~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~ 605 (640)
.+|+||||||+|||++ ++.+||+|||+|+.
T Consensus 212 ~giiHrDlkp~NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 212 RGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp TTEECSCCSTTSEEEE-TTEEEECCCTTCEE
T ss_pred CCCEeCCCCHHHEEEE-CCcEEEEECCCCeE
Confidence 6999999999999999 99999999999973
No 348
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.89 E-value=2.5e-22 Score=193.70 Aligned_cols=159 Identities=23% Similarity=0.253 Sum_probs=146.2
Q ss_pred ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcc
Q 035691 162 EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTI 241 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~ 241 (640)
+.+++++|.++.+|..+. ++|++|+|++|.|+++.+..|..+++|++|+|++|+|++..|.+|.++++|+.|
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L------ 85 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL------ 85 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEE------
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEE------
Confidence 578899999999998765 789999999999998888899999999999999999998889999999999988
Q ss_pred ccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCC
Q 035691 242 FLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLE 321 (640)
Q Consensus 242 ~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 321 (640)
+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+
T Consensus 86 ----------~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 155 (220)
T 2v9t_B 86 ----------VLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQ 155 (220)
T ss_dssp ----------ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred ----------ECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCC
Confidence 8888899977788899999999999999999998899999999999999999999998888999999999
Q ss_pred eEeCcCCccccccCCcc
Q 035691 322 GLDLFQNTFQAKSQNGD 338 (640)
Q Consensus 322 ~L~l~~N~l~~~~~~~~ 338 (640)
+|+|++|+|.|.|...+
T Consensus 156 ~L~L~~N~~~c~c~l~~ 172 (220)
T 2v9t_B 156 TMHLAQNPFICDCHLKW 172 (220)
T ss_dssp EEECCSSCEECSGGGHH
T ss_pred EEEeCCCCcCCCCccHH
Confidence 99999999999876433
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2e-22 Score=192.69 Aligned_cols=146 Identities=21% Similarity=0.222 Sum_probs=73.8
Q ss_pred CCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccc
Q 035691 72 LPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRF 151 (640)
Q Consensus 72 lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 151 (640)
+|+..+..+++|+.|+|++|++++..+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|+.++
T Consensus 43 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~------ 116 (208)
T 2o6s_A 43 LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLP------ 116 (208)
T ss_dssp CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------
T ss_pred CChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccC------
Confidence 33333333444444444444444444444444555555555555555444444455555555555555554432
Q ss_pred cccccCCCCcceEecCCCCCCCcCcC-CCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCC
Q 035691 152 LDSLVNCTYLEIVSLNVNSLRSIPIS-VGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCH 230 (640)
Q Consensus 152 ~~~l~~l~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 230 (640)
+..|.++++|+.|++++|.++.+|.. +..+++|++|++++|.+.+ .+++|++|+++.|+++|.+|.+++.++
T Consensus 117 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 117 DGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred HhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 12334445555555555555554443 4445666666666665542 234566666666666666666655554
No 350
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.88 E-value=3.7e-22 Score=192.44 Aligned_cols=161 Identities=19% Similarity=0.182 Sum_probs=144.5
Q ss_pred cceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCC-cCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccC
Q 035691 161 LEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIP-SSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSK 239 (640)
Q Consensus 161 L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 239 (640)
-+.+++++|.++.+|..+. +.+++|+|++|.|++..| ..|..+++|++|+|++|+|++..+.+|.++++|+.|
T Consensus 13 ~~~l~~s~n~l~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L---- 86 (220)
T 2v70_A 13 GTTVDCSNQKLNKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI---- 86 (220)
T ss_dssp TTEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE----
T ss_pred CCEeEeCCCCcccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE----
Confidence 3578899999999987664 457899999999998755 568999999999999999998888899999999888
Q ss_pred ccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCC
Q 035691 240 TIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKS 319 (640)
Q Consensus 240 n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 319 (640)
+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++
T Consensus 87 ------------~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 154 (220)
T 2v70_A 87 ------------LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHS 154 (220)
T ss_dssp ------------ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTT
T ss_pred ------------ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCC
Confidence 88889999888889999999999999999999888999999999999999999999999999999999
Q ss_pred CCeEeCcCCccccccCCccc
Q 035691 320 LEGLDLFQNTFQAKSQNGDV 339 (640)
Q Consensus 320 L~~L~l~~N~l~~~~~~~~~ 339 (640)
|++|+|++|+|.|.+...++
T Consensus 155 L~~L~L~~N~l~c~c~l~~l 174 (220)
T 2v70_A 155 LSTLNLLANPFNCNCYLAWL 174 (220)
T ss_dssp CCEEECCSCCEECSGGGHHH
T ss_pred CCEEEecCcCCcCCCchHHH
Confidence 99999999999988764433
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=3.7e-22 Score=190.92 Aligned_cols=178 Identities=20% Similarity=0.202 Sum_probs=98.3
Q ss_pred CEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCE
Q 035691 54 RTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTR 133 (640)
Q Consensus 54 ~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 133 (640)
+.++.+.+.++. +|..+ .++|+.|+|++|++++..+..|.++++|++|+|++|+|+++.+..|..+++|++
T Consensus 10 ~~v~c~~~~l~~------~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (208)
T 2o6s_A 10 TTVECYSQGRTS------VPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTY 80 (208)
T ss_dssp TEEECCSSCCSS------CCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CEEEecCCCccC------CCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCE
Confidence 455666665554 44433 245566666666666555555566666666666666666554455555555555
Q ss_pred EEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcC-CCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEE
Q 035691 134 LNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPIS-VGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELN 212 (640)
Q Consensus 134 L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 212 (640)
|+|++|+++.+ |.. +..+++|++|+|++|.|++..+..|..+++|++|+
T Consensus 81 L~Ls~n~l~~~------------------------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 81 LNLSTNQLQSL------------------------------PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp EECCSSCCCCC------------------------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred EECCCCcCCcc------------------------------CHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 55555555543 332 34455566666666666555555556666666666
Q ss_pred ccCCCCCCCCCccccCCCCccEEeccCccccCCC-CCceEEccCCcCCCCCCccCCCCC
Q 035691 213 LRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQY-PVRWLDLSHNHLTGPIPLAVGNLK 270 (640)
Q Consensus 213 L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~-~l~~L~Ls~N~l~~~~~~~~~~l~ 270 (640)
|++|++++..+..|..+++|+.|++++|.+.+.. .+++|+++.|+++|.+|..++.++
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCCCHHHHHHHHHhCCceeeccCcccc
Confidence 6666666555555666666666644444333221 234445666666666666555544
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=3.5e-22 Score=218.12 Aligned_cols=195 Identities=26% Similarity=0.372 Sum_probs=142.0
Q ss_pred CCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCC
Q 035691 52 ELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNL 131 (640)
Q Consensus 52 ~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 131 (640)
+|+.|+|++|.|+. +|..++ ++|+.|+|++|+|+. +| ..+++|++|+|++|+|++ +|. |.+ +|
T Consensus 60 ~L~~L~Ls~n~L~~------lp~~l~---~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L 122 (571)
T 3cvr_A 60 QFSELQLNRLNLSS------LPDNLP---PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-LPA--SL 122 (571)
T ss_dssp TCSEEECCSSCCSC------CCSCCC---TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TC
T ss_pred CccEEEeCCCCCCc------cCHhHc---CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-hhc--CC
Confidence 77788887777764 666553 677888888888773 44 346788888888888886 555 554 78
Q ss_pred CEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEE
Q 035691 132 TRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTEL 211 (640)
Q Consensus 132 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 211 (640)
++|+|++|+|+.++. .+++|+.|++++|.|+.+|. .+++|++|+|++|.|++ +|. |. ++|+.|
T Consensus 123 ~~L~Ls~N~l~~lp~----------~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L 185 (571)
T 3cvr_A 123 KHLDVDNNQLTMLPE----------LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEAL 185 (571)
T ss_dssp CEEECCSSCCSCCCC----------CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEE
T ss_pred CEEECCCCcCCCCCC----------cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEE
Confidence 888888888877532 46788888888888888876 46788899999998886 555 65 889999
Q ss_pred EccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCcccc
Q 035691 212 NLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLG 291 (640)
Q Consensus 212 ~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 291 (640)
+|++|+|+ .+|. |.. +| +.....++.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..|.
T Consensus 186 ~Ls~N~L~-~lp~-~~~--~L---------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 186 DVSTNLLE-SLPA-VPV--RN---------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp ECCSSCCS-SCCC-CC-------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred ECcCCCCC-chhh-HHH--hh---------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 99999888 5554 443 44 111122344488888888 5777777799999999999999988888877
Q ss_pred CCC
Q 035691 292 SCV 294 (640)
Q Consensus 292 ~l~ 294 (640)
.++
T Consensus 252 ~l~ 254 (571)
T 3cvr_A 252 QQT 254 (571)
T ss_dssp HHH
T ss_pred Hhh
Confidence 654
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=4.2e-22 Score=217.49 Aligned_cols=195 Identities=24% Similarity=0.291 Sum_probs=156.3
Q ss_pred hhhcCC-----CCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCccccc
Q 035691 22 EIGRLF-----QLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGN 96 (640)
Q Consensus 22 ~~~~l~-----~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~ 96 (640)
.+.+++ +|+.|+|++|.|++ +|..+ +++|++|+|++|+|+. +| ..+++|+.|+|++|+|++
T Consensus 49 ~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~------ip----~~l~~L~~L~Ls~N~l~~- 114 (571)
T 3cvr_A 49 AVSLLKECLINQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALIS------LP----ELPASLEYLDACDNRLST- 114 (571)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSC------CC----CCCTTCCEEECCSSCCSC-
T ss_pred hhhhccccccCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcc------cc----cccCCCCEEEccCCCCCC-
Confidence 566665 89999999999986 66655 3789999999998875 77 237899999999999997
Q ss_pred CCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCc
Q 035691 97 IPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPI 176 (640)
Q Consensus 97 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~ 176 (640)
+|. |.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|+.++. .+++|++|+|++|+|+.+|.
T Consensus 115 ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~----------~l~~L~~L~Ls~N~L~~lp~ 177 (571)
T 3cvr_A 115 LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE----------LPTSLEVLSVRNNQLTFLPE 177 (571)
T ss_dssp CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC----------CCTTCCEEECCSSCCSCCCC
T ss_pred cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC----------cCCCcCEEECCCCCCCCcch
Confidence 555 665 89999999999997 555 67899999999999987632 46789999999999999988
Q ss_pred CCCCCCCCCEEEccCCcCcccCCcCccCCCCC-------CEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCc
Q 035691 177 SVGYLPKLQVLSLFENNISGEIPSSLGNFTFL-------TELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVR 249 (640)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~ 249 (640)
+. ++|++|+|++|.|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|
T Consensus 178 -l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L-------------- 235 (571)
T 3cvr_A 178 -LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTI-------------- 235 (571)
T ss_dssp -CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEE--------------
T ss_pred -hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEE--------------
Confidence 65 89999999999999 5665 654 77 99999999998 567777779999888
Q ss_pred eEEccCCcCCCCCCccCCCCCC
Q 035691 250 WLDLSHNHLTGPIPLAVGNLKS 271 (640)
Q Consensus 250 ~L~Ls~N~l~~~~~~~~~~l~~ 271 (640)
+|++|++++.+|..|..++.
T Consensus 236 --~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 236 --ILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp --ECCSSSCCHHHHHHHHHHHH
T ss_pred --EeeCCcCCCcCHHHHHHhhc
Confidence 77777777777777776654
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.87 E-value=2.3e-21 Score=188.13 Aligned_cols=157 Identities=25% Similarity=0.305 Sum_probs=145.3
Q ss_pred CcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccC
Q 035691 160 YLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSK 239 (640)
Q Consensus 160 ~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 239 (640)
.-+.++++++.++.+|..+. ++|++|+|++|.|+++.|..|.++++|++|+|++|+|....+..|..+++|+.|
T Consensus 20 s~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L---- 93 (229)
T 3e6j_A 20 SGTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL---- 93 (229)
T ss_dssp ETTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE----
T ss_pred eCCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE----
Confidence 46789999999999998665 899999999999999989999999999999999999998877888999999988
Q ss_pred ccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCC
Q 035691 240 TIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKS 319 (640)
Q Consensus 240 n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 319 (640)
+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++
T Consensus 94 ------------~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 160 (229)
T 3e6j_A 94 ------------DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSS 160 (229)
T ss_dssp ------------ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTT
T ss_pred ------------ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCC
Confidence 88889999888888999999999999999999 78899999999999999999999888888999999
Q ss_pred CCeEeCcCCccccccC
Q 035691 320 LEGLDLFQNTFQAKSQ 335 (640)
Q Consensus 320 L~~L~l~~N~l~~~~~ 335 (640)
|+.|+|++|+|.|.+.
T Consensus 161 L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 161 LTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCEEECTTSCBCTTBG
T ss_pred CCEEEeeCCCccCCcc
Confidence 9999999999998774
No 355
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.87 E-value=1.2e-24 Score=242.53 Aligned_cols=196 Identities=17% Similarity=0.183 Sum_probs=113.6
Q ss_pred CCCCcceEecCCCCCCC--cCcCCCCCCCCCEEEccCCcCccc-CCcCccCCCCCCEEEcc---------CCCCCCCCCc
Q 035691 157 NCTYLEIVSLNVNSLRS--IPISVGYLPKLQVLSLFENNISGE-IPSSLGNFTFLTELNLR---------GNSIRGSIPS 224 (640)
Q Consensus 157 ~l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~---------~N~l~~~~~~ 224 (640)
.+++|+.|++++|.++. ++..+..+++|++|++++| +... ++.....+++|++|+++ .+.++.....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 45667777777777554 2222445677777777766 3321 12222346777777773 2344432222
Q ss_pred ccc-CCCCccEEeccCcccc---------CCCCCceEEcc--C----CcCCCCCC-----ccCCCCCCCCEEECCCCccc
Q 035691 225 ALG-NCHQLQSLDLSKTIFL---------GQYPVRWLDLS--H----NHLTGPIP-----LAVGNLKSIPHLDLSKNKLS 283 (640)
Q Consensus 225 ~~~-~l~~L~~L~ls~n~~~---------~~~~l~~L~Ls--~----N~l~~~~~-----~~~~~l~~L~~L~Ls~N~l~ 283 (640)
.+. .+++|+.|+++.|.+. ..+.|+.|+++ + |.+++... ..+..+++|+.|+|++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 222 3677777776666553 24567888887 3 45553221 1255677888888866 565
Q ss_pred CcCCccccC-CCCCCeEEecCCccCCCCCccC-CCCCCCCeEeCcCCccccccCCcccCCCCCCCCCccccccCCC
Q 035691 284 GEIPSSLGS-CVGLEYLNLSINSFHGPIHPGL-SSLKSLEGLDLFQNTFQAKSQNGDVPRKGIFKNASAISVAGNE 357 (640)
Q Consensus 284 ~~~p~~~~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~~~~p~~~~~~~~~~~~~~~n~ 357 (640)
+..+..+.. +++|++|+|++|.+++..+..+ ..+++|++|+|++|+++..... .-...+++++.+++.+|+
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~---~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALL---ANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHH---HTGGGGGGSSEEEEESSC
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHH---HHHHhCCCCCEEeeeCCC
Confidence 544444544 6788888888888765444444 5578888888888887421110 011234567777777654
No 356
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.87 E-value=9.4e-25 Score=243.43 Aligned_cols=199 Identities=16% Similarity=0.155 Sum_probs=144.9
Q ss_pred cCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCC--cCcCCCCCCCCCEEEcc---------CCcC
Q 035691 126 GRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRS--IPISVGYLPKLQVLSLF---------ENNI 194 (640)
Q Consensus 126 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~L~---------~N~l 194 (640)
..+++|++|+|++|.++... ....+..+++|+.|++++| +.. ++.....+++|++|+++ .+.+
T Consensus 286 ~~~~~L~~L~L~~~~l~~~~-----l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l 359 (594)
T 2p1m_B 286 SVCSRLTTLNLSYATVQSYD-----LVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVAL 359 (594)
T ss_dssp HHHTTCCEEECTTCCCCHHH-----HHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCC
T ss_pred HhhCCCCEEEccCCCCCHHH-----HHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCC
Confidence 35688999999998865431 2223567899999999988 443 22222347899999994 3556
Q ss_pred cccCCcCcc-CCCCCCEEEccCCCCCCCCCcccc-CCCCccEEecc--C----cccc-------------CCCCCceEEc
Q 035691 195 SGEIPSSLG-NFTFLTELNLRGNSIRGSIPSALG-NCHQLQSLDLS--K----TIFL-------------GQYPVRWLDL 253 (640)
Q Consensus 195 ~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls--~----n~~~-------------~~~~l~~L~L 253 (640)
++.....+. ++++|+.|.++.|.+++..+..+. .+++|+.|+++ + +.+. ....|+.|+|
T Consensus 360 ~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L 439 (594)
T 2p1m_B 360 TEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSL 439 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEEC
T ss_pred CHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEee
Confidence 543333333 478999999999999866555554 58999999999 3 3333 3456999999
Q ss_pred cCCcCCCCCCccCCC-CCCCCEEECCCCcccCcCCccc-cCCCCCCeEEecCCccCCCCCc-cCCCCCCCCeEeCcCCcc
Q 035691 254 SHNHLTGPIPLAVGN-LKSIPHLDLSKNKLSGEIPSSL-GSCVGLEYLNLSINSFHGPIHP-GLSSLKSLEGLDLFQNTF 330 (640)
Q Consensus 254 s~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l~~N~l 330 (640)
++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|++|+|++|++++.... ....+++|++|++++|++
T Consensus 440 ~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 440 SG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred cC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 87 666555555554 8899999999999986655555 6689999999999999654333 445689999999999988
Q ss_pred c
Q 035691 331 Q 331 (640)
Q Consensus 331 ~ 331 (640)
+
T Consensus 519 ~ 519 (594)
T 2p1m_B 519 S 519 (594)
T ss_dssp B
T ss_pred C
Confidence 5
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.86 E-value=3e-22 Score=201.89 Aligned_cols=184 Identities=25% Similarity=0.282 Sum_probs=102.9
Q ss_pred eCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeec
Q 035691 9 NLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLL 88 (640)
Q Consensus 9 ~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L 88 (640)
++..+.+++..+ +..+++|++|++++|.++.. + .+..+++|++|+|++|+|+. +++ +..+++|+.|+|
T Consensus 30 ~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~------~~~--l~~l~~L~~L~l 97 (291)
T 1h6t_A 30 NLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD------IKP--LANLKNLGWLFL 97 (291)
T ss_dssp HTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC------CGG--GTTCTTCCEEEC
T ss_pred HhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCC------Ccc--cccCCCCCEEEC
Confidence 444455543322 34566666666666666633 2 25666666666666666654 333 334666666666
Q ss_pred cCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCC
Q 035691 89 AGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNV 168 (640)
Q Consensus 89 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~ 168 (640)
++|++++. ..+..+++|++|+|++|++++. ..+..+++|++|+|++|+++.+ ..+..+++|+.|++++
T Consensus 98 ~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--------~~l~~l~~L~~L~L~~ 165 (291)
T 1h6t_A 98 DENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--------TVLSRLTKLDTLSLED 165 (291)
T ss_dssp CSSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--------GGGGGCTTCSEEECCS
T ss_pred CCCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--------hhhccCCCCCEEEccC
Confidence 66666542 2355666666666666666642 3455666666666666666543 2345555566666666
Q ss_pred CCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCC
Q 035691 169 NSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIR 219 (640)
Q Consensus 169 N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 219 (640)
|+++.++. +..+++|++|+|++|.|++. | .+..+++|+.|++++|++.
T Consensus 166 N~l~~~~~-l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 166 NQISDIVP-LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp SCCCCCGG-GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred Cccccchh-hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 66655544 55555666666666665532 2 2555555666666655555
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.86 E-value=6.3e-22 Score=218.50 Aligned_cols=193 Identities=24% Similarity=0.265 Sum_probs=142.4
Q ss_pred CcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCC
Q 035691 5 LMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIR 84 (640)
Q Consensus 5 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~ 84 (640)
+..++++.+.+.+..+ +..+.+|+.|++++|.|.. +| .|..+++|+.|+|++|+|+. +|+ +..+++|+
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~------~~~--l~~l~~L~ 90 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD------IKP--LTNLKNLG 90 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCC------CGG--GGGCTTCC
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCC------Chh--hccCCCCC
Confidence 3445667777775544 5677888888888888874 33 47888888888888888765 554 44688888
Q ss_pred eeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceE
Q 035691 85 IPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIV 164 (640)
Q Consensus 85 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L 164 (640)
.|+|++|+|++. ..|..+++|++|+|++|+|+++ ..+..+++|+.|+|++|+|+.+ ..+..+++|+.|
T Consensus 91 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--------~~l~~l~~L~~L 158 (605)
T 1m9s_A 91 WLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--------TVLSRLTKLDTL 158 (605)
T ss_dssp EEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--------GGGGSCTTCSEE
T ss_pred EEECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--------hhhcccCCCCEE
Confidence 888888888753 3677888888888888888853 3477888888888888888764 356677888888
Q ss_pred ecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCc
Q 035691 165 SLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPS 224 (640)
Q Consensus 165 ~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 224 (640)
+|++|.|+.+++ +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++.+....
T Consensus 159 ~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 159 SLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp ECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred ECcCCcCCCchh-hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccc
Confidence 888888877655 77778888888888888754 3577788888888888887754433
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.86 E-value=1.1e-21 Score=204.28 Aligned_cols=159 Identities=21% Similarity=0.208 Sum_probs=114.6
Q ss_pred cceEecCCCCCCCcCcC-CC-CCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEecc
Q 035691 161 LEIVSLNVNSLRSIPIS-VG-YLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLS 238 (640)
Q Consensus 161 L~~L~L~~N~l~~ip~~-~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 238 (640)
++.|+|++|+|+.++.. +. .+++|++|+|++|.|+++.+..|.++++|++|+|++|+|++..+..|.++++|+.|
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L--- 117 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVL--- 117 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE---
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEE---
Confidence 44555555555554433 33 56777777777777776666777777777777777777776666677777777777
Q ss_pred CccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccc---cCCCCCCeEEecCCccCCCCCccCC
Q 035691 239 KTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSL---GSCVGLEYLNLSINSFHGPIHPGLS 315 (640)
Q Consensus 239 ~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~~~~~~ 315 (640)
+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..|.
T Consensus 118 -------------~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 184 (361)
T 2xot_A 118 -------------LLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQ 184 (361)
T ss_dssp -------------ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHH
T ss_pred -------------ECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhh
Confidence 666777776677788888888888888888885444445 5678888888888888877667777
Q ss_pred CCCC--CCeEeCcCCccccccC
Q 035691 316 SLKS--LEGLDLFQNTFQAKSQ 335 (640)
Q Consensus 316 ~l~~--L~~L~l~~N~l~~~~~ 335 (640)
.++. ++.|+|++|+|.|.|.
T Consensus 185 ~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 185 KLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp HSCHHHHTTEECCSSCEECCHH
T ss_pred hccHhhcceEEecCCCccCCcC
Confidence 7776 4889999999988774
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.86 E-value=1.4e-21 Score=197.04 Aligned_cols=189 Identities=24% Similarity=0.308 Sum_probs=123.1
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcc
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLE 162 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 162 (640)
+..+.+..+.+++.. .+..+++|++|++++|.++.. + .+..+++|++|+|++|+++.++ .+.++++|+
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~--------~l~~l~~L~ 93 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK--------PLANLKNLG 93 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG--------GGTTCTTCC
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCc--------ccccCCCCC
Confidence 334445555555332 234566777777777777753 3 3677777777777777776652 156667777
Q ss_pred eEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccc
Q 035691 163 IVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIF 242 (640)
Q Consensus 163 ~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~ 242 (640)
+|++++|.++.+|. +..+++|++|+|++|.+++. ..+..+++|+.|+|++|++++. ..+..+++|+.|
T Consensus 94 ~L~l~~n~l~~~~~-l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L------- 161 (291)
T 1h6t_A 94 WLFLDENKVKDLSS-LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL------- 161 (291)
T ss_dssp EEECCSSCCCCGGG-GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEE-------
T ss_pred EEECCCCcCCCChh-hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEE-------
Confidence 77777777776554 66677777777777777743 3566777777777777777644 456666666666
Q ss_pred cCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCC
Q 035691 243 LGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHG 308 (640)
Q Consensus 243 ~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 308 (640)
++++|++++..+ +..+++|+.|+|++|+|++ +| .+..+++|+.|++++|+++.
T Consensus 162 ---------~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 162 ---------SLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ---------ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred ---------EccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 666666665444 6677777777777777764 33 36667777777777777664
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.86 E-value=1.4e-21 Score=215.64 Aligned_cols=199 Identities=25% Similarity=0.288 Sum_probs=139.1
Q ss_pred CCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCc
Q 035691 82 NIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYL 161 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L 161 (640)
++..+.|+.+.+....+ +..+++|+.|+|++|.|+.+ + .|..+++|+.|+|++|+|+.++ .+..+++|
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~--------~l~~l~~L 89 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK--------PLTNLKNL 89 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCG--------GGGGCTTC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCCh--------hhccCCCC
Confidence 34455566666654433 44567777777777777743 3 4677777777777777776652 16667777
Q ss_pred ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcc
Q 035691 162 EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTI 241 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~ 241 (640)
+.|+|++|.|+.+| .+..+++|++|+|++|.|.+. ..+..+++|+.|+|++|+|++. ..|..+++|+.|
T Consensus 90 ~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L------ 158 (605)
T 1m9s_A 90 GWLFLDENKIKDLS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL------ 158 (605)
T ss_dssp CEEECCSSCCCCCT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEE------
T ss_pred CEEECcCCCCCCCh-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEE------
Confidence 77777777777765 567778888888888888753 3577788888888888888754 457777777777
Q ss_pred ccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCC
Q 035691 242 FLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSL 317 (640)
Q Consensus 242 ~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 317 (640)
+|++|+|++..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+.....+..+
T Consensus 159 ----------~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 159 ----------SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp ----------ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSC
T ss_pred ----------ECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccE
Confidence 677777776555 77888888888888888753 357788888888888888876544444433
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=2.5e-21 Score=201.52 Aligned_cols=174 Identities=20% Similarity=0.145 Sum_probs=96.1
Q ss_pred CEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCc-CCCCCCEEECcCCccCccCCccccCCCCCC
Q 035691 54 RTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSIS-NASKLEWLDFANNSLTASIPEDLGRLRNLT 132 (640)
Q Consensus 54 ~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (640)
+++++++|.|+. +|..++ +.++.|+|++|+|+++.+..|. ++++|++|+|++|+|+++.+..|.++++|+
T Consensus 21 ~~l~c~~~~l~~------iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~ 91 (361)
T 2xot_A 21 NILSCSKQQLPN------VPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLR 91 (361)
T ss_dssp TEEECCSSCCSS------CCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CEEEeCCCCcCc------cCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCC
Confidence 345555555443 444332 2345555555555555555554 555555555555555555555555555555
Q ss_pred EEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCc-CcCCCCCCCCCEEEccCCcCcccCCcCc---cCCCCC
Q 035691 133 RLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSI-PISVGYLPKLQVLSLFENNISGEIPSSL---GNFTFL 208 (640)
Q Consensus 133 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L 208 (640)
+|+|++|+|+.+ .+..|.++++|+.|+|++|+|+.+ |..+..+++|++|+|++|.|+++.+..| ..+++|
T Consensus 92 ~L~Ls~N~l~~~------~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L 165 (361)
T 2xot_A 92 YLDLSSNHLHTL------DEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKL 165 (361)
T ss_dssp EEECCSSCCCEE------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTC
T ss_pred EEECCCCcCCcC------CHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcC
Confidence 555555555544 223344555555555555555554 3345556666666666666665444444 456777
Q ss_pred CEEEccCCCCCCCCCccccCCCCc--cEEeccCccc
Q 035691 209 TELNLRGNSIRGSIPSALGNCHQL--QSLDLSKTIF 242 (640)
Q Consensus 209 ~~L~L~~N~l~~~~~~~~~~l~~L--~~L~ls~n~~ 242 (640)
+.|+|++|+|+...+..|..++.+ +.|+|++|.+
T Consensus 166 ~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 166 MLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp CEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCE
T ss_pred CEEECCCCCCCccCHHHhhhccHhhcceEEecCCCc
Confidence 777777777775555566666653 5665555544
No 363
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=1.1e-21 Score=201.55 Aligned_cols=226 Identities=11% Similarity=0.052 Sum_probs=152.3
Q ss_pred CCchhhcC--------CCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcC--
Q 035691 72 LPPYIGFT--------LPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDL-- 141 (640)
Q Consensus 72 lp~~~~~~--------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l-- 141 (640)
+|+..|.+ +++|+.++|.+ +++.+.+.+|.++++|+.|++++|.++.+.+.+|.++.++..+.+..+..
T Consensus 84 I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~ 162 (329)
T 3sb4_A 84 VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYR 162 (329)
T ss_dssp ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHH
T ss_pred cCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhh
Confidence 55555555 77777777777 67767777777777777777777777767777777766666666555321
Q ss_pred --CCCCCCcccccccccCCCCcc-eEecCCCCCCCcCcC----CCCCCCCCEEEccCCcCcccCCcCc-cCCCCCCEEEc
Q 035691 142 --GTRKVNDLRFLDSLVNCTYLE-IVSLNVNSLRSIPIS----VGYLPKLQVLSLFENNISGEIPSSL-GNFTFLTELNL 213 (640)
Q Consensus 142 --~~~~~~~~~~~~~l~~l~~L~-~L~L~~N~l~~ip~~----~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L 213 (640)
..+ ....|.++..|+ .+.+... ..++.. -....+++.+.+.++-.. .....+ ..+++|+.|+|
T Consensus 163 ~~~~i------~~~~f~~~~~L~~~i~~~~~--~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L 233 (329)
T 3sb4_A 163 FKNRW------EHFAFIEGEPLETTIQVGAM--GKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDI 233 (329)
T ss_dssp TSTTT------TTSCEEESCCCEEEEEECTT--CCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEEC
T ss_pred ccccc------cccccccccccceeEEecCC--CcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEEC
Confidence 111 112344555555 3333321 112221 112445666666655322 111111 23688899999
Q ss_pred cCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCC-EEECCCCcccCcCCccccC
Q 035691 214 RGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIP-HLDLSKNKLSGEIPSSLGS 292 (640)
Q Consensus 214 ~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~ 292 (640)
++|+++.+.+.+|.+|.+|+.+ +|++| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.+
T Consensus 234 ~~n~i~~I~~~aF~~~~~L~~l----------------~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~ 295 (329)
T 3sb4_A 234 SKTNATTIPDFTFAQKKYLLKI----------------KLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMG 295 (329)
T ss_dssp TTBCCCEECTTTTTTCTTCCEE----------------ECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTT
T ss_pred CCCCcceecHhhhhCCCCCCEE----------------ECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhC
Confidence 9888887777888888888888 66666 6667778899999998 999988 777677788999
Q ss_pred CCCCCeEEecCCccCCCCCccCCCCCCCCeEeC
Q 035691 293 CVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDL 325 (640)
Q Consensus 293 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 325 (640)
|++|+.|++++|.++.+.+.+|.++++|+.++.
T Consensus 296 c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 296 CDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999999999999998888889999999988874
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=2.5e-20 Score=180.79 Aligned_cols=155 Identities=23% Similarity=0.202 Sum_probs=121.1
Q ss_pred CCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCC
Q 035691 52 ELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNL 131 (640)
Q Consensus 52 ~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 131 (640)
..+.++.+++.++. +|..+ .++|+.|+|++|+|++..|..|.++++|++|+|++|+|+.+.+..|..+++|
T Consensus 20 s~~~v~c~~~~l~~------ip~~~---~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 90 (229)
T 3e6j_A 20 SGTTVDCRSKRHAS------VPAGI---PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90 (229)
T ss_dssp ETTEEECTTSCCSS------CCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred eCCEeEccCCCcCc------cCCCC---CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCc
Confidence 35678888777765 77655 3678888888888888888888888888888888888887777778888888
Q ss_pred CEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEE
Q 035691 132 TRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTEL 211 (640)
Q Consensus 132 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 211 (640)
++|+|++|+|+.++ +..|..+++|++|+|++|+|+.+|..+..+++|++|+|++|.|++..+..|..+++|+.|
T Consensus 91 ~~L~Ls~N~l~~l~------~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 164 (229)
T 3e6j_A 91 TVLDLGTNQLTVLP------SAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHA 164 (229)
T ss_dssp CEEECCSSCCCCCC------TTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CEEECCCCcCCccC------hhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 88888888888763 344667778888888888888888777778888888888888887666778888888888
Q ss_pred EccCCCCCCC
Q 035691 212 NLRGNSIRGS 221 (640)
Q Consensus 212 ~L~~N~l~~~ 221 (640)
+|++|++...
T Consensus 165 ~l~~N~~~c~ 174 (229)
T 3e6j_A 165 YLFGNPWDCE 174 (229)
T ss_dssp ECTTSCBCTT
T ss_pred EeeCCCccCC
Confidence 8888887744
No 365
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=3.7e-20 Score=178.39 Aligned_cols=150 Identities=24% Similarity=0.277 Sum_probs=85.6
Q ss_pred CEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCE
Q 035691 54 RTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTR 133 (640)
Q Consensus 54 ~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 133 (640)
+.+++++|.++. +|..+. ++++.|+|++|+|+++.+..|.++++|++|+|++|+|+++.|.+|.++++|++
T Consensus 14 ~~v~c~~~~l~~------iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~ 84 (220)
T 2v9t_B 14 NIVDCRGKGLTE------IPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 84 (220)
T ss_dssp TEEECTTSCCSS------CCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCE
T ss_pred CEEEcCCCCcCc------CCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCE
Confidence 455666666554 554432 45555555555555555555666666666666666666555555666666666
Q ss_pred EEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcC-CCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEE
Q 035691 134 LNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPIS-VGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELN 212 (640)
Q Consensus 134 L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 212 (640)
|+|++|+|+.+ |.. +..+++|++|+|++|.|+++.|..|..+++|++|+
T Consensus 85 L~Ls~N~l~~l------------------------------~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 85 LVLYGNKITEL------------------------------PKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp EECCSSCCCCC------------------------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred EECCCCcCCcc------------------------------CHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 65555555544 332 23455556666666666555555666666666666
Q ss_pred ccCCCCCCCCCccccCCCCccEEeccCccc
Q 035691 213 LRGNSIRGSIPSALGNCHQLQSLDLSKTIF 242 (640)
Q Consensus 213 L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~ 242 (640)
|++|+|++..+..|..+++|+.|+|++|.|
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 666666655555566666666664444443
No 366
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=3.9e-20 Score=178.27 Aligned_cols=151 Identities=21% Similarity=0.250 Sum_probs=80.7
Q ss_pred CEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCC-ccCcCCCCCCEEECcCCccCccCCccccCCCCCC
Q 035691 54 RTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIP-HSISNASKLEWLDFANNSLTASIPEDLGRLRNLT 132 (640)
Q Consensus 54 ~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (640)
+++++++|.++. +|..++ +.++.|+|++|+|++..+ ..|.++++|++|+|++|+|+++.+.+|.++++|+
T Consensus 14 ~~l~~s~n~l~~------iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~ 84 (220)
T 2v70_A 14 TTVDCSNQKLNK------IPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVN 84 (220)
T ss_dssp TEEECCSSCCSS------CCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CEeEeCCCCccc------CccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCC
Confidence 356666665554 554332 234556666666665533 3456666666666666666665555666666666
Q ss_pred EEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCc-CcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEE
Q 035691 133 RLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSI-PISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTEL 211 (640)
Q Consensus 133 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 211 (640)
+|+|++|+|+.+ .+..|.++++|++|+|++|+|+.+ |..+..+++|++|+|++|.|++..|..|..+++|+.|
T Consensus 85 ~L~Ls~N~l~~~------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 158 (220)
T 2v70_A 85 EILLTSNRLENV------QHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTL 158 (220)
T ss_dssp EEECCSSCCCCC------CGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEE
T ss_pred EEECCCCccCcc------CHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEE
Confidence 666666666554 223344444444444444444443 3334444555555555555554445555555555555
Q ss_pred EccCCCCC
Q 035691 212 NLRGNSIR 219 (640)
Q Consensus 212 ~L~~N~l~ 219 (640)
+|++|++.
T Consensus 159 ~L~~N~l~ 166 (220)
T 2v70_A 159 NLLANPFN 166 (220)
T ss_dssp ECCSCCEE
T ss_pred EecCcCCc
Confidence 55555544
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.83 E-value=2.5e-23 Score=228.33 Aligned_cols=200 Identities=22% Similarity=0.217 Sum_probs=123.8
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCc-------------cCccCCcCCCCCCCCCEEE-ccCCCcCCccc
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNT-------------LQGQIPVNLTHCSELRTLD-LVLNKLEENQL 68 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~l~~~~~ 68 (640)
++|+.|+|++|+|+ .+|+.++.+++|+.|++++|. +.+..|..++.+++|+.|| ++.|.+.
T Consensus 349 ~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~---- 423 (567)
T 1dce_A 349 EQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD---- 423 (567)
T ss_dssp TTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH----
T ss_pred ccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc----
Confidence 45556666666665 456666666666666665553 3334444445555555555 3433221
Q ss_pred cccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCc
Q 035691 69 VGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVND 148 (640)
Q Consensus 69 ~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 148 (640)
+|+.+.+++|.|+...+ ..|++|+|++|+|++ +|. |+.+++|+.|+|++|+|+.+
T Consensus 424 -------------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~l---- 478 (567)
T 1dce_A 424 -------------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRAL---- 478 (567)
T ss_dssp -------------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCC----
T ss_pred -------------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccccc----
Confidence 22333444555554322 247777777777775 454 77777777777777777743
Q ss_pred ccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccC-CcCccCCCCCCEEEccCCCCCCCCCcc--
Q 035691 149 LRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEI-PSSLGNFTFLTELNLRGNSIRGSIPSA-- 225 (640)
Q Consensus 149 ~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~-- 225 (640)
|..+.++++|+.|+|++|+|+.+| .+..+++|++|+|++|.|++.. |..|..+++|+.|+|++|++++.+|..
T Consensus 479 ---p~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 554 (567)
T 1dce_A 479 ---PPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQER 554 (567)
T ss_dssp ---CGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTH
T ss_pred ---chhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHH
Confidence 345667777777777777777776 6777777777777777777665 777777777777777777777554432
Q ss_pred -ccCCCCccEEe
Q 035691 226 -LGNCHQLQSLD 236 (640)
Q Consensus 226 -~~~l~~L~~L~ 236 (640)
+..+++|+.|+
T Consensus 555 l~~~lp~L~~L~ 566 (567)
T 1dce_A 555 LAEMLPSVSSIL 566 (567)
T ss_dssp HHHHCTTCSEEE
T ss_pred HHHHCcccCccC
Confidence 23356666663
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.83 E-value=6.4e-21 Score=189.08 Aligned_cols=166 Identities=25% Similarity=0.315 Sum_probs=76.6
Q ss_pred CCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCC
Q 035691 29 LRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLE 108 (640)
Q Consensus 29 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 108 (640)
++.+++++|.+++.. .+..+++|++|++++|+|++ +| . +..+++|+.|+|++|+|++..+ |.++++|+
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~------l~-~-l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~ 88 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS------LA-G-MQFFTNLKELHLSHNQISDLSP--LKDLTKLE 88 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC------CT-T-GGGCTTCCEEECCSSCCCCCGG--GTTCSSCC
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc------ch-H-HhhCCCCCEEECCCCccCCChh--hccCCCCC
Confidence 334444444444222 23444444444444444433 33 1 1224444444444444444333 44455555
Q ss_pred EEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEE
Q 035691 109 WLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLS 188 (640)
Q Consensus 109 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~ 188 (640)
+|+|++|++++. |. +.. ++|++|+|++|+++.+ ..+..+++|+.|++++|+++.+| .+..+++|++|+
T Consensus 89 ~L~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~--------~~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~ 156 (263)
T 1xeu_A 89 ELSVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT--------DSLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLD 156 (263)
T ss_dssp EEECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS--------GGGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEE
T ss_pred EEECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC--------hhhcCcccccEEECCCCcCCCCh-HHccCCCCCEEE
Confidence 555555555532 21 111 4455555555555443 12444455555555555555543 344455555555
Q ss_pred ccCCcCcccCCcCccCCCCCCEEEccCCCCCC
Q 035691 189 LFENNISGEIPSSLGNFTFLTELNLRGNSIRG 220 (640)
Q Consensus 189 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 220 (640)
|++|.|++. ..+..+++|+.|++++|++..
T Consensus 157 L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 157 LHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred CCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 555555543 345555555555555555543
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.83 E-value=4.8e-21 Score=189.96 Aligned_cols=164 Identities=20% Similarity=0.221 Sum_probs=73.2
Q ss_pred cEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCe
Q 035691 6 MLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRI 85 (640)
Q Consensus 6 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~ 85 (640)
..+++++|.+++.. .+..+++|++|++++|.|+. +| .+..+++|++|+|++|+|++ +|+ +..+++|+.
T Consensus 22 ~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~------~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 22 VKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD------LSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC------CGG--GTTCSSCCE
T ss_pred HHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC------Chh--hccCCCCCE
Confidence 33444444444222 34444445555555554442 22 34444455555555444443 333 233444555
Q ss_pred eeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEe
Q 035691 86 PLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVS 165 (640)
Q Consensus 86 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~ 165 (640)
|+|++|++++..+ +.. ++|++|+|++|+|++. + .+..+++|++|+|++|+|+++ ..+..+++|+.|+
T Consensus 90 L~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~--------~~l~~l~~L~~L~ 156 (263)
T 1xeu_A 90 LSVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI--------VMLGFLSKLEVLD 156 (263)
T ss_dssp EECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC--------GGGGGCTTCCEEE
T ss_pred EECCCCccCCcCc--ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC--------hHHccCCCCCEEE
Confidence 5555555443221 111 4455555555554432 1 244444555555555544433 1234444455555
Q ss_pred cCCCCCCCcCcCCCCCCCCCEEEccCCcCc
Q 035691 166 LNVNSLRSIPISVGYLPKLQVLSLFENNIS 195 (640)
Q Consensus 166 L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 195 (640)
+++|+++.+ ..+..+++|+.|++++|.+.
T Consensus 157 L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 157 LHGNEITNT-GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CTTSCCCBC-TTSTTCCCCCEEEEEEEEEE
T ss_pred CCCCcCcch-HHhccCCCCCEEeCCCCccc
Confidence 555554444 33444444555555555444
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=2.7e-23 Score=228.04 Aligned_cols=202 Identities=23% Similarity=0.229 Sum_probs=132.6
Q ss_pred CCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCc-------------cCccCCccccCCCCCCEEE-cccCcCCCCC
Q 035691 80 LPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNS-------------LTASIPEDLGRLRNLTRLN-FARNDLGTRK 145 (640)
Q Consensus 80 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l~~~~ 145 (640)
.++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+.
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~--- 423 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD--- 423 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH---
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc---
Confidence 455555666666555 345555555556666655543 3334444455555555554 4444331
Q ss_pred CCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCcc
Q 035691 146 VNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSA 225 (640)
Q Consensus 146 ~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 225 (640)
.|..+.+++|.++.+|. ..|+.|+|++|.|++ +|. |+.+++|+.|+|++|+|+ .+|..
T Consensus 424 --------------~L~~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~ 481 (567)
T 1dce_A 424 --------------DLRSKFLLENSVLKMEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPA 481 (567)
T ss_dssp --------------HHHHHHHHHHHHHHHHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGG
T ss_pred --------------hhhhhhhhcccccccCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchh
Confidence 23334445555555443 247888888888885 555 888888888888888888 66777
Q ss_pred ccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcC-CccccCCCCCCeEEecCC
Q 035691 226 LGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEI-PSSLGSCVGLEYLNLSIN 304 (640)
Q Consensus 226 ~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N 304 (640)
|+++++|+.| +|++|+|++ +| .|+.+++|+.|+|++|+|++.. |..|..+++|+.|+|++|
T Consensus 482 ~~~l~~L~~L----------------~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N 543 (567)
T 1dce_A 482 LAALRCLEVL----------------QASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGN 543 (567)
T ss_dssp GGGCTTCCEE----------------ECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTS
T ss_pred hhcCCCCCEE----------------ECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCC
Confidence 8888888777 777777775 45 7888888888888888888766 788888888888888888
Q ss_pred ccCCCCCcc---CCCCCCCCeEeC
Q 035691 305 SFHGPIHPG---LSSLKSLEGLDL 325 (640)
Q Consensus 305 ~l~~~~~~~---~~~l~~L~~L~l 325 (640)
+|++.+|.. +..+++|+.||+
T Consensus 544 ~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 544 SLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp GGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred cCCCCccHHHHHHHHCcccCccCC
Confidence 887655432 233677777764
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.81 E-value=8.9e-20 Score=172.63 Aligned_cols=153 Identities=19% Similarity=0.211 Sum_probs=83.8
Q ss_pred CCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccC
Q 035691 48 THCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGR 127 (640)
Q Consensus 48 ~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 127 (640)
..+++|++|++++|.|++ +| . +..+++|+.|++++|.++ .+..+..+++|++|++++|++++..+..|..
T Consensus 41 ~~l~~L~~L~l~~n~i~~------l~-~-l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~ 110 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTD------LT-G-IEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSG 110 (197)
T ss_dssp HHHHTCCEEEEESSCCSC------CT-T-GGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTT
T ss_pred hhcCCccEEeccCCCccC------hH-H-HhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcC
Confidence 344455555555555443 33 1 223455555555555443 2234555556666666666665555555566
Q ss_pred CCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCC-CCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCC
Q 035691 128 LRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNS-LRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFT 206 (640)
Q Consensus 128 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~-l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 206 (640)
+++|++|+|++|+++.. .+..+..+++|++|++++|. ++.+| .+..+++|++|++++|.+++ ++ .+..++
T Consensus 111 l~~L~~L~Ls~n~i~~~------~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~ 181 (197)
T 4ezg_A 111 LTSLTLLDISHSAHDDS------ILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFP 181 (197)
T ss_dssp CTTCCEEECCSSBCBGG------GHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCS
T ss_pred CCCCCEEEecCCccCcH------hHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCC
Confidence 66666666666665543 23445555666666666665 55555 45556667777777777664 23 566667
Q ss_pred CCCEEEccCCCCC
Q 035691 207 FLTELNLRGNSIR 219 (640)
Q Consensus 207 ~L~~L~L~~N~l~ 219 (640)
+|++|++++|+|.
T Consensus 182 ~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 182 KLNQLYAFSQTIG 194 (197)
T ss_dssp SCCEEEECBC---
T ss_pred CCCEEEeeCcccC
Confidence 7777777777664
No 372
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.80 E-value=1.8e-18 Score=181.57 Aligned_cols=266 Identities=10% Similarity=0.112 Sum_probs=183.8
Q ss_pred CCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCC
Q 035691 26 LFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNAS 105 (640)
Q Consensus 26 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 105 (640)
...++.+.+.+ .++.+...+|.++ +|+.+++..| ++. ++...|.. .+|+.+.|.+ .++.+.+.+|.+++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~------I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~ 180 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKS------IGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCY 180 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCE------ECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCT
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccE------ECHHhcCC-CCceEEEeCC-CccEehHHHhhCcc
Confidence 35666666653 4555666777774 6777777655 443 66777765 4677777775 66667777777788
Q ss_pred CCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCC
Q 035691 106 KLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQ 185 (640)
Q Consensus 106 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~ 185 (640)
+|+.++|++|+++.+...+|. ..+|+.+.|..| ++.+ ...+|.++++|+.+++..| ++.++...+.-.+|+
T Consensus 181 ~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I------~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~ 251 (401)
T 4fdw_A 181 NLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEI------GSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGIT 251 (401)
T ss_dssp TCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEE------CTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCS
T ss_pred cCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hhee------hhhHhhCCCCCCEEecCCC-ccCccccccccCCcc
Confidence 888888887777776666776 477788877743 6665 3356677777777777764 566655433336777
Q ss_pred EEEccCCcCcccCCcCccCCCCCCEEEccCCCCC-----CCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCC
Q 035691 186 VLSLFENNISGEIPSSLGNFTFLTELNLRGNSIR-----GSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTG 260 (640)
Q Consensus 186 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~ 260 (640)
.+.+ .|.++.+.+.+|.++++|+.+++.+|.+. .+.+.+|.+|++|+.+ +|. |.++.
T Consensus 252 ~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l----------------~l~-~~i~~ 313 (401)
T 4fdw_A 252 TVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARF----------------EIP-ESIRI 313 (401)
T ss_dssp EEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEE----------------CCC-TTCCE
T ss_pred EEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeE----------------EeC-CceEE
Confidence 7777 45566566777777788888887777664 3555667777777766 555 34665
Q ss_pred CCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCC-CCCeEeCcCCccc
Q 035691 261 PIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLK-SLEGLDLFQNTFQ 331 (640)
Q Consensus 261 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~ 331 (640)
+...+|.++++|+.++|..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ +++.|++..|.+.
T Consensus 314 I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 314 LGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp ECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 66777888888888888555 665667778888 888888888877766777777774 6777777777655
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=6.5e-20 Score=188.34 Aligned_cols=246 Identities=11% Similarity=0.092 Sum_probs=180.8
Q ss_pred CCCCCeEEcccCccC--------------------ccCCcCCCC--------CCCCCEEEccCCCcCCccccccCCchhh
Q 035691 26 LFQLRYIIFNSNTLQ--------------------GQIPVNLTH--------CSELRTLDLVLNKLEENQLVGELPPYIG 77 (640)
Q Consensus 26 l~~L~~L~l~~N~l~--------------------~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~~~~~lp~~~~ 77 (640)
+++|++|+|++|+|. .+.+.+|.+ +++|+.|+|.. .++. +++..|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~------I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKN------IEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCE------ECTTTT
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccc------hhHHHh
Confidence 455666666666555 345667888 99999999998 7765 999999
Q ss_pred cCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCc----cCccCCccccCCCCCC-EEEcccCcCCCCCCCccccc
Q 035691 78 FTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNS----LTASIPEDLGRLRNLT-RLNFARNDLGTRKVNDLRFL 152 (640)
Q Consensus 78 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~----l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~~ 152 (640)
.++++|+.+++++|.+..+.+.+|.++.++..+.+..+. ...+...+|.++.+|+ .+.+.... .++.. ..
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~--~l~~~---~~ 195 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG--KLEDE---IM 195 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC--CHHHH---HH
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC--cHHHH---Hh
Confidence 999999999999999999999999998888888887743 3344566788888887 55554322 11100 00
Q ss_pred ccccCCCCcceEecCCCCCCCcCcCC-CCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCC
Q 035691 153 DSLVNCTYLEIVSLNVNSLRSIPISV-GYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQ 231 (640)
Q Consensus 153 ~~l~~l~~L~~L~L~~N~l~~ip~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 231 (640)
..-....++..+.+.++-...-...+ ..+++|+.++|++|.++.+.+.+|.++++|+.|+|++| ++.+.+.+|.+|++
T Consensus 196 ~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~ 274 (329)
T 3sb4_A 196 KAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGR 274 (329)
T ss_dssp HTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred hcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChh
Confidence 11112445566666554221111111 12678999999999998888888999999999999988 77777888999988
Q ss_pred cc-EEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEe
Q 035691 232 LQ-SLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNL 301 (640)
Q Consensus 232 L~-~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 301 (640)
|+ .+ ++++ +++.+.+.+|.++++|+.|++++|+++.+.+.+|.++++|+.++.
T Consensus 275 L~~~l----------------~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 275 LAGTL----------------ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEEE----------------EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ccEEE----------------EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 88 88 6665 676677889999999999999999998777789999999998874
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.80 E-value=7.9e-20 Score=173.00 Aligned_cols=153 Identities=16% Similarity=0.234 Sum_probs=84.0
Q ss_pred cCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCC
Q 035691 126 GRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNF 205 (640)
Q Consensus 126 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 205 (640)
..+++|++|++++|.++.++ .+..+++|++|++++|.++.++ .+..+++|++|++++|.+++..|..|..+
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~--------~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l 111 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT--------GIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTSDKIPNLSGL 111 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT--------TGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTC
T ss_pred hhcCCccEEeccCCCccChH--------HHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCcccChhhcCC
Confidence 55666777777777766442 2445566666666666555443 45555666666666666665555556666
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCc-CCCCCCccCCCCCCCCEEECCCCcccC
Q 035691 206 TFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNH-LTGPIPLAVGNLKSIPHLDLSKNKLSG 284 (640)
Q Consensus 206 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 284 (640)
++|++|+|++|++++..|..+..+++|+.| ++++|. ++ .+| .+..+++|+.|++++|++++
T Consensus 112 ~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L----------------~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 112 TSLTLLDISHSAHDDSILTKINTLPKVNSI----------------DLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp TTCCEEECCSSBCBGGGHHHHTTCSSCCEE----------------ECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC
T ss_pred CCCCEEEecCCccCcHhHHHHhhCCCCCEE----------------EccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC
Confidence 666666666666655455555555555555 444444 33 222 35555555555555555553
Q ss_pred cCCccccCCCCCCeEEecCCccC
Q 035691 285 EIPSSLGSCVGLEYLNLSINSFH 307 (640)
Q Consensus 285 ~~p~~~~~l~~L~~L~L~~N~l~ 307 (640)
++ .+..+++|++|++++|++.
T Consensus 174 -~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 174 -YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp -CT-TGGGCSSCCEEEECBC---
T ss_pred -hH-HhccCCCCCEEEeeCcccC
Confidence 22 4555555555555555543
No 375
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.1e-19 Score=179.63 Aligned_cols=139 Identities=19% Similarity=0.151 Sum_probs=106.4
Q ss_pred CCcccCcccccccceEEEEEECCCCeE--EEEEEeecccch------------------------hHHHHHHHHHHHHhc
Q 035691 442 GFSSANLIGTGSFGSVYKGILDPDQTV--VAVKVLFLHQRG------------------------ALKSFMAECEALRNI 495 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 495 (640)
-|++.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|++.+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999998668989 999987432111 113688999999999
Q ss_pred CCCCC--cceeEeeccCCcCCCceeeEEeeccCC-C----ChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 035691 496 RHRNL--VKIITACSSSDFQGNDFKALVYEFMHH-G----SLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEY 568 (640)
Q Consensus 496 ~H~ni--v~l~~~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~y 568 (640)
+|+++ +..+++ ...++||||+.+ | +|.++... .++..+..++.|++.||.|
T Consensus 128 ~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-------------~~~~~~~~i~~qi~~~l~~ 185 (258)
T 1zth_A 128 KEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-------------LKELDVEGIFNDVVENVKR 185 (258)
T ss_dssp HHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-------------GGGSCHHHHHHHHHHHHHH
T ss_pred HhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-------------cChHHHHHHHHHHHHHHHH
Confidence 88864 344332 235799999953 4 56655421 1123457899999999999
Q ss_pred Hh-cCCCCCeeeCCCCCCCeeeCCCCcEEEccccccccCC
Q 035691 569 LH-HHCKKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFIP 607 (640)
Q Consensus 569 LH-~~~~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~ 607 (640)
|| + .+|+||||||+|||+++ .++|+|||+|....
T Consensus 186 lH~~---~givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 186 LYQE---AELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHHT---SCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHH---CCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 99 7 69999999999999998 99999999998653
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=2.1e-20 Score=211.53 Aligned_cols=222 Identities=20% Similarity=0.220 Sum_probs=97.3
Q ss_pred CCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCC
Q 035691 27 FQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASK 106 (640)
Q Consensus 27 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 106 (640)
+.++.|+|.+|.+.. .+. ..|+.++|+.|.|.. ++++.|.+. ..|+.|..+++
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~~--------------------~~~~~n~~~-~~~~~~~~l~~ 225 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSIDE--------------------DDDIENRMV-MPKDSKYDDQL 225 (727)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCcccccC--------------------cccccccee-cChhhhccCCC
Confidence 345566666666653 222 234455555554432 233445544 45667777777
Q ss_pred CCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCE
Q 035691 107 LEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQV 186 (640)
Q Consensus 107 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~ 186 (640)
|+.|+|++|.|. .+|..+..+++|++|+|++|.|+.+ +..|.++++|++|+|++|.|+.+|..+..+++|++
T Consensus 226 L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~l-------p~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~ 297 (727)
T 4b8c_D 226 WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTEL-------PAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKY 297 (727)
T ss_dssp CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCC-------CGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSE
T ss_pred CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCccc-------ChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCE
Confidence 777777777777 4555555777777777777777743 45567777777777777777777777777777777
Q ss_pred EEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCc-cEEeccCccccCCCCCceEEccCCcCCCCCCcc
Q 035691 187 LSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQL-QSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLA 265 (640)
Q Consensus 187 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~ 265 (640)
|+|++|.|+ .+|..|+.+++|++|+|++|+|++.+|..+..+... ..+ +|++|.+++.+|..
T Consensus 298 L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l----------------~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 298 FYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIF----------------YLRDNRPEIPLPHE 360 (727)
T ss_dssp EECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHH----------------HHHHCCCCCCCCCC
T ss_pred EECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHH----------------hhccCcccCcCccc
Confidence 777777776 556667777777777777777777777666544221 123 56666666666543
Q ss_pred CCCCCCCCEEECCCC--------cccCcCCccccCCCCCCeEEecCCcc
Q 035691 266 VGNLKSIPHLDLSKN--------KLSGEIPSSLGSCVGLEYLNLSINSF 306 (640)
Q Consensus 266 ~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~L~~N~l 306 (640)
|+.|++++| .|.+..+..+..+..+....++.|-+
T Consensus 361 ------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil 403 (727)
T 4b8c_D 361 ------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTL 403 (727)
T ss_dssp -----------------------------------------------CC
T ss_pred ------cceeEeecccccccccCCccccccchhhcccccceeeeecccc
Confidence 344455555 23333333334444445555555544
No 377
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=2e-20 Score=211.63 Aligned_cols=222 Identities=21% Similarity=0.208 Sum_probs=76.4
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCc---------cCCcCCCCCCCCCEEEccCCCcCCccccccCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQG---------QIPVNLTHCSELRTLDLVLNKLEENQLVGELP 73 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~---------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp 73 (640)
+.++.|+|.+|.+.. .+..+ |+.++|++|.|.+ ..|..|..++.|+.|||++|+|.. +|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~------l~ 240 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQAL-----LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFN------IS 240 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCSC------CC
T ss_pred CccceEEeeCCCCCc-chhhH-----hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCCC------CC
Confidence 347789999999985 34333 3444455554442 345555566666666666555543 55
Q ss_pred chhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccc
Q 035691 74 PYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLD 153 (640)
Q Consensus 74 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 153 (640)
..++ .+++|+.|+|++|.|+ .+|..|+++++|++|||++|+|+ .+|..|+
T Consensus 241 ~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~--------------------------- 290 (727)
T 4b8c_D 241 ANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELG--------------------------- 290 (727)
T ss_dssp GGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGG---------------------------
T ss_pred hhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhc---------------------------
Confidence 5444 2455555555555554 34444444455555555555544 2344444
Q ss_pred cccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCC-CCEEEccCCCCCCCCCccccCCCCc
Q 035691 154 SLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTF-LTELNLRGNSIRGSIPSALGNCHQL 232 (640)
Q Consensus 154 ~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L 232 (640)
++++|++|+|++|.|+.+|..+..+++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|..+
T Consensus 291 ---~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l------ 361 (727)
T 4b8c_D 291 ---SCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER------ 361 (727)
T ss_dssp ---GGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------
T ss_pred ---CCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc------
Confidence 445555555555555555555666666666666666666666665544321 2235666777666665432
Q ss_pred cEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCccc
Q 035691 233 QSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLS 283 (640)
Q Consensus 233 ~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 283 (640)
..|+++.|.. +....+.+.+..+..+..+..+....++.|-+.
T Consensus 362 ~~l~l~~n~~--------~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 362 RFIEINTDGE--------PQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ------------------------------------------------CCC
T ss_pred ceeEeecccc--------cccccCCccccccchhhcccccceeeeeccccc
Confidence 3333333200 011123444555556666667777777777765
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.79 E-value=2.7e-19 Score=168.46 Aligned_cols=129 Identities=25% Similarity=0.349 Sum_probs=67.5
Q ss_pred ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCc-CccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCc
Q 035691 162 EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPS-SLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKT 240 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n 240 (640)
+.+++++|.++.+|..+. .+|++|+|++|.|+++.+. .|..+++|++|+|++|+|++..|.+|.++++|+.|
T Consensus 11 ~~l~~s~~~l~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L----- 83 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQEL----- 83 (192)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEE-----
T ss_pred CEEEcCCCCcCcCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEE-----
Confidence 556666666666665443 2566666666666544443 35555555555555555555555555555555444
Q ss_pred cccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCC
Q 035691 241 IFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHG 308 (640)
Q Consensus 241 ~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 308 (640)
+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++
T Consensus 84 -----------~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 84 -----------QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp -----------ECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred -----------ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 444444444444444445555555555555544444444444444444444444443
No 379
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=1.6e-18 Score=163.25 Aligned_cols=129 Identities=26% Similarity=0.345 Sum_probs=76.3
Q ss_pred CEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcC--CCCCCCCCEEEccCCcCcccCCcCccCCCCCC
Q 035691 132 TRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPIS--VGYLPKLQVLSLFENNISGEIPSSLGNFTFLT 209 (640)
Q Consensus 132 ~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~--~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 209 (640)
+.+++++|.++.+|. .+. .+|+.|++++|.|+.++.. +..+++|++|+|++|.|++..|..|.++++|+
T Consensus 11 ~~l~~s~~~l~~ip~-------~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 81 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPR-------DIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQ 81 (192)
T ss_dssp TEEECTTSCCSSCCS-------CCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CEEEcCCCCcCcCcc-------CCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCC
Confidence 556666666655432 111 1566666666666665442 45566666666666666665566666666666
Q ss_pred EEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCc
Q 035691 210 ELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGE 285 (640)
Q Consensus 210 ~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 285 (640)
+|+|++|+|++..+..|.++++|+.| +|++|+|++..|..|..+++|+.|+|++|.+++.
T Consensus 82 ~L~Ls~N~l~~~~~~~~~~l~~L~~L----------------~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 82 ELQLGENKIKEISNKMFLGLHQLKTL----------------NLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp EEECCSCCCCEECSSSSTTCTTCCEE----------------ECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred EEECCCCcCCccCHHHhcCCCCCCEE----------------ECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 66666666665555556666666555 5555566655566666666666666666666543
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.78 E-value=1.1e-17 Score=175.48 Aligned_cols=264 Identities=15% Similarity=0.137 Sum_probs=220.1
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
+.++.+.+. |.++.+...+|.+. +|+.+.+..| ++.+...+|.++ +|+.+++.. .++. ++...|..+++
T Consensus 113 ~~l~~i~ip-~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~------I~~~aF~~c~~ 181 (401)
T 4fdw_A 113 KGYNEIILP-NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQ------LKEDIFYYCYN 181 (401)
T ss_dssp SSCSEEECC-TTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCE------ECSSTTTTCTT
T ss_pred CCccEEEEC-CccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccE------ehHHHhhCccc
Confidence 345566665 35666777889885 8999999877 887888899985 799999984 5554 88899999999
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcc
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLE 162 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 162 (640)
|+.++|++|+++.+...+|. .++|+.+.|..| ++.+...+|.++++|+.+++..| ++.++. .+|.+ ++|+
T Consensus 182 L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~------~aF~~-~~L~ 251 (401)
T 4fdw_A 182 LKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQ------EAFRE-SGIT 251 (401)
T ss_dssp CCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECT------TTTTT-CCCS
T ss_pred CCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccc------ccccc-CCcc
Confidence 99999999999998888898 589999999855 88888999999999999999975 666643 45556 6899
Q ss_pred eEecCCCCCCCcCc-CCCCCCCCCEEEccCCcCc-----ccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEe
Q 035691 163 IVSLNVNSLRSIPI-SVGYLPKLQVLSLFENNIS-----GEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLD 236 (640)
Q Consensus 163 ~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 236 (640)
.+.+ .+.++.++. +|..+++|+.+++.+|.+. .+.+.+|.++++|+.++|. +.++.+...+|.+|.+|+.+
T Consensus 252 ~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l- 328 (401)
T 4fdw_A 252 TVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQL- 328 (401)
T ss_dssp EEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEE-
T ss_pred EEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEE-
Confidence 9999 566888755 6778999999999998876 5778899999999999999 45887888899999999998
Q ss_pred ccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCC-CCCeEEecCCccC
Q 035691 237 LSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCV-GLEYLNLSINSFH 307 (640)
Q Consensus 237 ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~ 307 (640)
+|..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 329 ---------------~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 329 ---------------TIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp ---------------EECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred ---------------EECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 66443 666778899999 999999999999977788898884 7899999988764
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.76 E-value=5.7e-18 Score=159.37 Aligned_cols=134 Identities=23% Similarity=0.282 Sum_probs=98.4
Q ss_pred CEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCc
Q 035691 185 QVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPL 264 (640)
Q Consensus 185 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~ 264 (640)
+.+++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.| +|++|+|++..+.
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L----------------~Ls~N~i~~i~~~ 72 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLI----------------DLSNNRISTLSNQ 72 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEE----------------ECCSSCCCCCCTT
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEE----------------ECCCCcCCEeCHh
Confidence 45555566555 3343332 45666667777666 455666666667666 6666777767777
Q ss_pred cCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCcc
Q 035691 265 AVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGD 338 (640)
Q Consensus 265 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 338 (640)
.|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|+|.|.|...+
T Consensus 73 ~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~ 146 (193)
T 2wfh_A 73 SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQW 146 (193)
T ss_dssp TTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHH
T ss_pred HccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHH
Confidence 78888888888888888887777788888888888888888887777788889999999999999998775433
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.74 E-value=6.3e-18 Score=155.46 Aligned_cols=140 Identities=18% Similarity=0.164 Sum_probs=77.9
Q ss_pred CCCCeEEcccCccC-ccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCC
Q 035691 27 FQLRYIIFNSNTLQ-GQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNAS 105 (640)
Q Consensus 27 ~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 105 (640)
++|++|++++|.++ +.+|..+..+++|++|+|++|.|+. + ..+..+++|+.|+|++|++++.+|..+.+++
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~------~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 95 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS------V--SNLPKLPKLKKLELSENRIFGGLDMLAEKLP 95 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC------C--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCT
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC------h--hhhccCCCCCEEECcCCcCchHHHHHHhhCC
Confidence 45555555555555 4445555555556666665555543 2 2223455566666666666555555555566
Q ss_pred CCCEEECcCCccCccCC-ccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcC
Q 035691 106 KLEWLDFANNSLTASIP-EDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPIS 177 (640)
Q Consensus 106 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~ 177 (640)
+|++|+|++|+|++..+ ..|..+++|++|++++|.++..+.- ....+..+++|++|+++.|.+..+|.+
T Consensus 96 ~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~---~~~~~~~l~~L~~L~l~~n~~~~~~~~ 165 (168)
T 2ell_A 96 NLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDY---RESVFKLLPQLTYLDGYDREDQEAPDS 165 (168)
T ss_dssp TCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTH---HHHHHTTCSSCCEETTEETTSCBCCSS
T ss_pred CCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHH---HHHHHHhCccCcEecCCCCChhhcccc
Confidence 66666666666664322 5566666666666666666554210 002455566666666666666665543
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=2.1e-17 Score=155.45 Aligned_cols=128 Identities=26% Similarity=0.310 Sum_probs=113.6
Q ss_pred ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCcc
Q 035691 162 EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTI 241 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~ 241 (640)
+.+++++|.++.+|..+. ++|++|+|++|.|+ .+|..|.++++|++|+|++|+|++..+.+|.++++|+.|
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L------ 83 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL------ 83 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE------
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEE------
Confidence 578888888888887664 68999999999998 677889999999999999999998888889999999888
Q ss_pred ccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCC
Q 035691 242 FLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHG 308 (640)
Q Consensus 242 ~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 308 (640)
+|++|+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|++..
T Consensus 84 ----------~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 84 ----------ILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp ----------ECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ----------ECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 888888988888899999999999999999997777789999999999999999975
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.73 E-value=4.8e-17 Score=150.93 Aligned_cols=82 Identities=22% Similarity=0.219 Sum_probs=46.4
Q ss_pred EccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccc
Q 035691 252 DLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQ 331 (640)
Q Consensus 252 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 331 (640)
++++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++.
T Consensus 58 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 58 SLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 44444444444444555555555555555555444445555666666666666666555555566666666666666666
Q ss_pred cc
Q 035691 332 AK 333 (640)
Q Consensus 332 ~~ 333 (640)
+.
T Consensus 138 ~~ 139 (177)
T 2o6r_A 138 CS 139 (177)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=8.8e-17 Score=149.15 Aligned_cols=134 Identities=20% Similarity=0.205 Sum_probs=120.7
Q ss_pred CcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccC
Q 035691 160 YLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSK 239 (640)
Q Consensus 160 ~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 239 (640)
..+.+++++|.++.+|..+. ++|++|++++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|+.|
T Consensus 8 ~~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L---- 81 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTIL---- 81 (177)
T ss_dssp ETTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE----
T ss_pred CCCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEE----
Confidence 35789999999999997654 799999999999998888889999999999999999998888888999999988
Q ss_pred ccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCC
Q 035691 240 TIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIH 311 (640)
Q Consensus 240 n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 311 (640)
+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..|
T Consensus 82 ------------~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 82 ------------YLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp ------------ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ------------ECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 888899998888889999999999999999997777778999999999999999987544
No 386
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=1.5e-17 Score=152.92 Aligned_cols=133 Identities=25% Similarity=0.243 Sum_probs=89.8
Q ss_pred CCCCCEEEccCCcCc-ccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCC
Q 035691 181 LPKLQVLSLFENNIS-GEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLT 259 (640)
Q Consensus 181 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~ 259 (640)
.++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|+.| +|++|+++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L----------------~Ls~N~l~ 84 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKL----------------ELSENRIF 84 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEE----------------EEESCCCC
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEE----------------ECcCCcCc
Confidence 356677777777776 45566666677777777777777644 556666666666 66666666
Q ss_pred CCCCccCCCCCCCCEEECCCCcccCcCC-ccccCCCCCCeEEecCCccCCCCC---ccCCCCCCCCeEeCcCCccc
Q 035691 260 GPIPLAVGNLKSIPHLDLSKNKLSGEIP-SSLGSCVGLEYLNLSINSFHGPIH---PGLSSLKSLEGLDLFQNTFQ 331 (640)
Q Consensus 260 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~ 331 (640)
+.+|..+..+++|+.|+|++|+|++..+ ..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 85 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 85 GGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp SCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred hHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5566666667777777777777764322 567777777777777777775554 46777777777777777765
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.70 E-value=2.5e-17 Score=148.15 Aligned_cols=130 Identities=15% Similarity=0.145 Sum_probs=72.6
Q ss_pred CCCCeEEcccCccC-ccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccCcCCC
Q 035691 27 FQLRYIIFNSNTLQ-GQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNAS 105 (640)
Q Consensus 27 ~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 105 (640)
++|+.|++++|.++ +.+|..+..+++|++|++++|+|+. + ..+..+++|+.|+|++|++++.+|..+.+++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~------~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 88 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS------I--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCP 88 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCC------C--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCT
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCC------c--hhhhcCCCCCEEECCCCcccchHHHHhhhCC
Confidence 45556666666655 4555555556666666666555543 2 2223455666666666666655555555566
Q ss_pred CCCEEECcCCccCcc-CCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecC
Q 035691 106 KLEWLDFANNSLTAS-IPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLN 167 (640)
Q Consensus 106 ~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~ 167 (640)
+|++|++++|++++. .+..+..+++|++|++++|+++..+.- ....+..+++|+.|+++
T Consensus 89 ~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~---~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 89 NLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDY---RENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTH---HHHHHHHCTTCCEETTB
T ss_pred CCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHH---HHHHHHHCCCcccccCC
Confidence 666666666666653 235566666666666666666554210 00235556666666654
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=2e-17 Score=148.80 Aligned_cols=127 Identities=21% Similarity=0.243 Sum_probs=72.6
Q ss_pred CCCCEEEccCCcCc-ccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCC
Q 035691 182 PKLQVLSLFENNIS-GEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTG 260 (640)
Q Consensus 182 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~ 260 (640)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.| ++++|.+++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L----------------~Ls~n~i~~ 78 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKL----------------ELSDNRVSG 78 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEE----------------ECCSSCCCS
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEE----------------ECCCCcccc
Confidence 44555555555555 44555555555566666666655543 445555555555 555555554
Q ss_pred CCCccCCCCCCCCEEECCCCcccCc-CCccccCCCCCCeEEecCCccCCCCC---ccCCCCCCCCeEeCc
Q 035691 261 PIPLAVGNLKSIPHLDLSKNKLSGE-IPSSLGSCVGLEYLNLSINSFHGPIH---PGLSSLKSLEGLDLF 326 (640)
Q Consensus 261 ~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~ 326 (640)
.+|..+..+++|++|++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|++||++
T Consensus 79 ~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 79 GLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred hHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4555555566666666666666542 23556666666666666666665444 356666666666654
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.69 E-value=1.3e-15 Score=160.34 Aligned_cols=292 Identities=13% Similarity=0.086 Sum_probs=193.7
Q ss_pred cccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCC---
Q 035691 15 FSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGN--- 91 (640)
Q Consensus 15 i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N--- 91 (640)
++.+...+|.++.+|+.+.+.. .++.+...+|.++++|+.+++..+ ++. ++...|....+|+.+.+..+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~------I~~~aF~~c~~L~~i~~p~~l~~ 130 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKM------IGRCTFSGCYALKSILLPLMLKS 130 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCE------ECTTTTTTCTTCCCCCCCTTCCE
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceE------ccchhhcccccchhhcccCceee
Confidence 4445556677777777777753 366566667777777777777543 332 55555555555555444332
Q ss_pred ------------------cccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccc
Q 035691 92 ------------------QFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLD 153 (640)
Q Consensus 92 ------------------~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 153 (640)
.+..+...+|.++++|+.+.+.++. ..+...+|.++.+|+.+++..| ++.+ ...
T Consensus 131 i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I------~~~ 202 (394)
T 4fs7_A 131 IGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKII------RDY 202 (394)
T ss_dssp ECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEE------CTT
T ss_pred ecceeeecccccccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEe------Cch
Confidence 2222334567777777777776553 3356667777777777777665 4444 224
Q ss_pred cccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCcc
Q 035691 154 SLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQ 233 (640)
Q Consensus 154 ~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 233 (640)
.|.++..|+.+.+..+.. .+........+|+.+.+..+ ++.+...+|.++.+|+.+.+..+... +...+|..+..++
T Consensus 203 ~F~~~~~L~~i~~~~~~~-~i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~ 279 (394)
T 4fs7_A 203 CFAECILLENMEFPNSLY-YLGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLK 279 (394)
T ss_dssp TTTTCTTCCBCCCCTTCC-EECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCC
T ss_pred hhccccccceeecCCCce-EeehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccc
Confidence 566677777776665533 23334444567777777644 34366677888888888888777554 6667788888888
Q ss_pred EEeccCc-----cccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCC
Q 035691 234 SLDLSKT-----IFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHG 308 (640)
Q Consensus 234 ~L~ls~n-----~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 308 (640)
.+....+ .|.+...|+.+.+..+ ++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+++..| ++.
T Consensus 280 ~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~ 356 (394)
T 4fs7_A 280 KVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRK 356 (394)
T ss_dssp EEEECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCE
T ss_pred eeccCceeeccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccE
Confidence 7766543 4556667888888655 66566778888888888888754 66566778888888888888776 776
Q ss_pred CCCccCCCCCCCCeEeCcCC
Q 035691 309 PIHPGLSSLKSLEGLDLFQN 328 (640)
Q Consensus 309 ~~~~~~~~l~~L~~L~l~~N 328 (640)
+...+|.++++|+.+++..+
T Consensus 357 I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 357 IGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp ECTTTBTTCTTCCEEEEEGG
T ss_pred ehHHHhhCCCCCCEEEECCC
Confidence 77788888888888888654
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.66 E-value=1.5e-16 Score=147.44 Aligned_cols=128 Identities=17% Similarity=0.225 Sum_probs=56.1
Q ss_pred CCCcEEeCCCCccccCCchhhhcCC-CCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLF-QLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLP 81 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~ 81 (640)
++|+.|+|++|+|+. +|. +..+. +|++|++++|.|++. ..|..+++|++|+|++|+|+. +|+.++..++
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~------~~~~~~~~l~ 88 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR------IGEGLDQALP 88 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE------ECSCHHHHCT
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc------cCcchhhcCC
Confidence 444555555555542 232 22222 455555555555433 334445555555555444442 4444433444
Q ss_pred CCCeeeccCCcccccCC-ccCcCCCCCCEEECcCCccCccCCc----cccCCCCCCEEEcccCcC
Q 035691 82 NIRIPLLAGNQFFGNIP-HSISNASKLEWLDFANNSLTASIPE----DLGRLRNLTRLNFARNDL 141 (640)
Q Consensus 82 ~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~L~~N~l 141 (640)
+|+.|+|++|+|+...+ ..+..+++|++|++++|.++. .|. .+..+++|+.|++++|.+
T Consensus 89 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 89 DLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp TCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 44444444444432211 134444444444444444442 222 244444444444444443
No 391
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66 E-value=6e-17 Score=166.04 Aligned_cols=146 Identities=10% Similarity=0.094 Sum_probs=102.9
Q ss_pred HHHHHHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccc--------------hhHH--------HHHHHHH
Q 035691 433 YESLLKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR--------------GALK--------SFMAECE 490 (640)
Q Consensus 433 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~ 490 (640)
+..+.....-|++...||+|+||.||+|... +|+.||||+++.... .... ....|..
T Consensus 87 L~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~ 165 (397)
T 4gyi_A 87 LHTHAARKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA 165 (397)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 3455555556899999999999999999986 799999998743210 0111 2234566
Q ss_pred HHHhcCCCCCcceeEeeccCCcCCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 035691 491 ALRNIRHRNLVKIITACSSSDFQGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLH 570 (640)
Q Consensus 491 ~l~~l~H~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH 570 (640)
.|.++.+.++.....+ .....++||||++|+.+..+.... ....++.|++.||.|||
T Consensus 166 nL~rL~~~gv~vp~p~-------~~~~~~LVME~i~G~~L~~l~~~~----------------~~~~l~~qll~~l~~lH 222 (397)
T 4gyi_A 166 FMKALYEEGFPVPEPI-------AQSRHTIVMSLVDALPMRQVSSVP----------------DPASLYADLIALILRLA 222 (397)
T ss_dssp HHHHHHHTTCSCCCEE-------EEETTEEEEECCSCEEGGGCCCCS----------------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCeee-------eccCceEEEEecCCccHhhhcccH----------------HHHHHHHHHHHHHHHHH
Confidence 6666654443221111 011236999999998887654211 12467899999999999
Q ss_pred cCCCCCeeeCCCCCCCeeeCCCC----------cEEEcccccccc
Q 035691 571 HHCKKQIVHCDLKPSNVLLDNDM----------IAHVGDFGLTRF 605 (640)
Q Consensus 571 ~~~~~~ivHrdlkp~NiLl~~~~----------~~kl~DfGla~~ 605 (640)
. .+||||||||.|||+++++ .+.|+||+-+-.
T Consensus 223 ~---~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 223 K---HGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp H---TTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred H---CCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 9 6999999999999998776 489999997653
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.64 E-value=3.1e-16 Score=145.25 Aligned_cols=79 Identities=15% Similarity=0.057 Sum_probs=37.6
Q ss_pred ccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccE
Q 035691 155 LVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQS 234 (640)
Q Consensus 155 l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 234 (640)
+.++++|+.|++++|.++.+|......++|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|+.
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred cCCcCCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 3344445555555555554432111123555555555555543 34555555555555555555433333344444444
Q ss_pred E
Q 035691 235 L 235 (640)
Q Consensus 235 L 235 (640)
|
T Consensus 93 L 93 (176)
T 1a9n_A 93 L 93 (176)
T ss_dssp E
T ss_pred E
Confidence 4
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.60 E-value=5.1e-15 Score=136.10 Aligned_cols=109 Identities=24% Similarity=0.305 Sum_probs=76.8
Q ss_pred CCEEEccCCCCCCCCCccccCCCCccEEeccCccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCC
Q 035691 208 LTELNLRGNSIRGSIPSALGNCHQLQSLDLSKTIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIP 287 (640)
Q Consensus 208 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 287 (640)
.+.+++++|.++. +|..+. ++|+.| +|++|+|++..|..|.++++|++|+|++|+|++..+
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L----------------~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~ 71 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVL----------------YLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPA 71 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEE----------------ECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEE----------------EcCCCcCCccChhhhcCcccCCEEECCCCCcCccCh
Confidence 3556666666663 333331 444444 666777776667777777777777777777776666
Q ss_pred ccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccC
Q 035691 288 SSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQ 335 (640)
Q Consensus 288 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 335 (640)
..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+|.+.
T Consensus 72 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 72 GVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred hhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 667777888888888888877777778888888888888888887663
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=1.6e-17 Score=157.19 Aligned_cols=127 Identities=21% Similarity=0.262 Sum_probs=59.3
Q ss_pred CCcEEeCCCCccccCCch------hhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhh
Q 035691 4 FLMLINLQQNNFSGNIPH------EIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIG 77 (640)
Q Consensus 4 ~L~~L~L~~n~i~~~~p~------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~ 77 (640)
.++.++++.+.+++..|. .|..+++|++|++++|.|++ +| .+..+++|++|+|++|+|+. +|....
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~------l~~~~~ 90 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK------IENLDA 90 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS------CSSHHH
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc------ccchhh
Confidence 444555555555554444 55555555555555555553 33 45555555555555555443 443222
Q ss_pred cCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCC-ccccCCCCCCEEEcccCcC
Q 035691 78 FTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIP-EDLGRLRNLTRLNFARNDL 141 (640)
Q Consensus 78 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l 141 (640)
.+++|+.|+|++|+|++. | .+..+++|++|+|++|+|+...+ ..+..+++|++|++++|.+
T Consensus 91 -~~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 91 -VADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp -HHHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred -cCCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcc
Confidence 234444444444444432 1 34444444444444444443221 2344444444444444444
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.58 E-value=1.2e-14 Score=134.00 Aligned_cols=83 Identities=23% Similarity=0.297 Sum_probs=57.1
Q ss_pred EccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccc
Q 035691 252 DLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQ 331 (640)
Q Consensus 252 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 331 (640)
+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|.
T Consensus 39 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 39 WLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred EeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 56666666666666666777777777777776555555667777777777777777666666777777777777777777
Q ss_pred ccc
Q 035691 332 AKS 334 (640)
Q Consensus 332 ~~~ 334 (640)
|.+
T Consensus 119 c~~ 121 (174)
T 2r9u_A 119 CEC 121 (174)
T ss_dssp TTB
T ss_pred ccc
Confidence 655
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=7.5e-18 Score=159.46 Aligned_cols=147 Identities=22% Similarity=0.282 Sum_probs=89.7
Q ss_pred CCCCCeeeccCCcccccCCc------cCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccc
Q 035691 80 LPNIRIPLLAGNQFFGNIPH------SISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLD 153 (640)
Q Consensus 80 l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 153 (640)
...++.++++.|.+++..|. .|..+++|++|+|++|+|++ +| .+..+++|++|+|++|+++.++ .
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~-------~ 87 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIE-------N 87 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCS-------S
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccccc-------c
Confidence 44555555555555555554 66666667777777776665 44 6666666777777777666432 3
Q ss_pred cccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCC-cCccCCCCCCEEEccCCCCCCCCCcc-------
Q 035691 154 SLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIP-SSLGNFTFLTELNLRGNSIRGSIPSA------- 225 (640)
Q Consensus 154 ~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~------- 225 (640)
.+..+++|+.|++++|+++.+| .+..+++|++|++++|.|++..+ ..+..+++|++|++++|++.+..|..
T Consensus 88 ~~~~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~ 166 (198)
T 1ds9_A 88 LDAVADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYR 166 (198)
T ss_dssp HHHHHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHH
T ss_pred hhhcCCcCCEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHH
Confidence 3444566666666666666665 35556667777777777664332 35666677777777777766554432
Q ss_pred ---ccCCCCccEEe
Q 035691 226 ---LGNCHQLQSLD 236 (640)
Q Consensus 226 ---~~~l~~L~~L~ 236 (640)
+..+++|+.||
T Consensus 167 ~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 167 IEVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHHCSSCSEEC
T ss_pred HHHHHhCCCcEEEC
Confidence 56666666663
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=1.5e-14 Score=132.88 Aligned_cols=73 Identities=29% Similarity=0.356 Sum_probs=38.7
Q ss_pred cceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEE
Q 035691 161 LEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSL 235 (640)
Q Consensus 161 L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 235 (640)
.+.+++++|.++.+|..+. ++|++|+|++|.|+++.|..|.++++|++|+|++|+|++..+..|.++++|+.|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L 83 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQL 83 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEE
Confidence 3455566666655555442 455555555555555555555555555555555555554444444444444444
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.55 E-value=1.5e-13 Score=144.43 Aligned_cols=302 Identities=12% Similarity=0.056 Sum_probs=223.0
Q ss_pred CCCCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCc--CCccc----------
Q 035691 1 NLTFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKL--EENQL---------- 68 (640)
Q Consensus 1 nl~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l--~~~~~---------- 68 (640)
++++|+.++|.. .++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+-- ....+
T Consensus 69 ~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 69 GCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp TCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEEC
T ss_pred CCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeeccccccccc
Confidence 467899999974 588777889999999999999865 7767788999999999887764311 11111
Q ss_pred ---cccCCchhhcCCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCC
Q 035691 69 ---VGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRK 145 (640)
Q Consensus 69 ---~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 145 (640)
...+....|....+|+.+.+.++. ..+...+|.++++|+.+++..| ++.+...+|.++..|+.+.+..+... +
T Consensus 147 ~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i- 222 (394)
T 4fs7_A 147 PEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-L- 222 (394)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-E-
T ss_pred CccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-e-
Confidence 113456678888999999998664 5577889999999999999887 77678889999999999988776532 1
Q ss_pred CCcccccccccCCCCcceEecCCCCCCCcCc-CCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCc
Q 035691 146 VNDLRFLDSLVNCTYLEIVSLNVNSLRSIPI-SVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPS 224 (640)
Q Consensus 146 ~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 224 (640)
.+.....+.|+.+.+..+ ++.++. .+..+..|+.+.+..+... +....|..+..++.+....+.+ ...
T Consensus 223 ------~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~ 291 (394)
T 4fs7_A 223 ------GDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEK 291 (394)
T ss_dssp ------CTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTT
T ss_pred ------ehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccc
Confidence 122334466777776543 344433 4556777888887776554 6667777777777777766543 334
Q ss_pred cccCCCCccEEeccCc-------cccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCC
Q 035691 225 ALGNCHQLQSLDLSKT-------IFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLE 297 (640)
Q Consensus 225 ~~~~l~~L~~L~ls~n-------~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 297 (640)
+|..+.+|+.+.+.++ .|.+...|+.+++.++ ++.+...+|.++++|+.+++..| ++.+...+|.++++|+
T Consensus 292 ~F~~~~~L~~i~l~~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDSVKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLK 369 (394)
T ss_dssp TTTTCTTCCEEEECTTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCC
T ss_pred cccccccccccccccccceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCC
Confidence 6777777777776543 4666677777788754 77677889999999999999887 7767788999999999
Q ss_pred eEEecCCccCCCCCccCCCCCCCCeE
Q 035691 298 YLNLSINSFHGPIHPGLSSLKSLEGL 323 (640)
Q Consensus 298 ~L~L~~N~l~~~~~~~~~~l~~L~~L 323 (640)
.+++..+ ++ .+..+|.++++|+.+
T Consensus 370 ~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 370 KVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp EEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred EEEECCC-CE-EhhheecCCCCCcEE
Confidence 9999876 33 345678888888765
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=2.9e-14 Score=131.51 Aligned_cols=72 Identities=22% Similarity=0.274 Sum_probs=36.7
Q ss_pred ceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEE
Q 035691 162 EIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSL 235 (640)
Q Consensus 162 ~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 235 (640)
+.+++++|.++.+|..+. ++|++|+|++|.|+++.|..|.++++|++|+|++|+|++..+..|.++++|+.|
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L 86 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQL 86 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEE
Confidence 455555555555555443 455555555555555545555555555555555555554433334444444444
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.52 E-value=8.5e-13 Score=138.72 Aligned_cols=294 Identities=10% Similarity=0.113 Sum_probs=177.8
Q ss_pred ccCCchhhhcCC-CCCeEEcccCccCccCCcCCCCCCCCCEEEccCCC---cCCccccccCCchhhcCCCCCCeeeccCC
Q 035691 16 SGNIPHEIGRLF-QLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNK---LEENQLVGELPPYIGFTLPNIRIPLLAGN 91 (640)
Q Consensus 16 ~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~~~~~lp~~~~~~l~~L~~L~L~~N 91 (640)
+.+...+|.+.. .|+.+.+..+ ++.+...+|.++++|+.+.++.|. ++. ++...|....+|+.+.+..+
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~------Ig~~aF~~c~~L~~i~~~~~ 124 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKK------IGRQAFMFCSELTDIPILDS 124 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCE------ECTTTTTTCTTCCBCGGGTT
T ss_pred eEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeE------echhhchhcccceeeccCCc
Confidence 334445676663 5888888644 676777888888888888887664 332 66777777777777776654
Q ss_pred cccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCC
Q 035691 92 QFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSL 171 (640)
Q Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 171 (640)
++.+...+|.++.+|+.+.+..+ ++.+...+|..+.+|+.+.+..+ ++.++.. +|.+ ..|+.+.+..+-.
T Consensus 125 -~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~------aF~~-~~l~~i~ip~~~~ 194 (394)
T 4gt6_A 125 -VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEER------AFTG-TALTQIHIPAKVT 194 (394)
T ss_dssp -CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTT------TTTT-CCCSEEEECTTCC
T ss_pred -cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccc------cccc-cceeEEEECCccc
Confidence 55566677888888888888654 44466677888888888887654 4444322 2222 3455555544322
Q ss_pred CCcCcCCCCCCCCCEEEccCCcCcccCCcCc--------------cCCCCCCEEEccCCCCCCCCCccccCCCCccEEec
Q 035691 172 RSIPISVGYLPKLQVLSLFENNISGEIPSSL--------------GNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDL 237 (640)
Q Consensus 172 ~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~--------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 237 (640)
.--...+....++.......+.... ....+ .....+..+.+.. .++.+...+|.++.+|+.+.+
T Consensus 195 ~i~~~af~~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~l 272 (394)
T 4gt6_A 195 RIGTNAFSECFALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKM 272 (394)
T ss_dssp EECTTTTTTCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEEC
T ss_pred ccccchhhhccccceeccccccccc-ccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEec
Confidence 2222234444445544444333221 11100 0111222222211 122223344455555555444
Q ss_pred cCc-------cccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCC
Q 035691 238 SKT-------IFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPI 310 (640)
Q Consensus 238 s~n-------~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 310 (640)
.++ .|.+...|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.+|.+|+.+.+..+ ++.+.
T Consensus 273 p~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~ 349 (394)
T 4gt6_A 273 PDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIP 349 (394)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCC
T ss_pred ccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEh
Confidence 322 23344445555664 4566566778899999999998765 66566778889999999999654 77677
Q ss_pred CccCCCCCCCCeEeCcCCccc
Q 035691 311 HPGLSSLKSLEGLDLFQNTFQ 331 (640)
Q Consensus 311 ~~~~~~l~~L~~L~l~~N~l~ 331 (640)
..+|.++++|+.+++.+|...
T Consensus 350 ~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 350 ESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp GGGGTTCTTCCEEEESSCHHH
T ss_pred HhHhhCCCCCCEEEECCceee
Confidence 788999999999999887644
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.45 E-value=4.6e-12 Score=133.08 Aligned_cols=294 Identities=9% Similarity=0.074 Sum_probs=220.3
Q ss_pred cCccCCcCCCCCC-CCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCc---ccccCCccCcCCCCCCEEECcC
Q 035691 39 LQGQIPVNLTHCS-ELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQ---FFGNIPHSISNASKLEWLDFAN 114 (640)
Q Consensus 39 l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~Ls~ 114 (640)
++.+...+|.++. .|+.+.+-.+ ++. +....|.+..+|+.+.+..|. ++.+...+|.++.+|+.+.+..
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~------Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~ 123 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTE------IGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILD 123 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCE------ECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGT
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeE------EhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCC
Confidence 4556677888885 6999999743 543 888899999999999998774 7777788999999999998876
Q ss_pred CccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcC
Q 035691 115 NSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNI 194 (640)
Q Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l 194 (640)
+ ++.+...+|.++.+|+.+.+..+ +..+ ....|.++..|+.+.+..+ ++.++...+...+|+.+.+..+-.
T Consensus 124 ~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I------~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~ 194 (394)
T 4gt6_A 124 S-VTEIDSEAFHHCEELDTVTIPEG-VTSV------ADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVT 194 (394)
T ss_dssp T-CSEECTTTTTTCTTCCEEECCTT-CCEE------CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCC
T ss_pred c-cceehhhhhhhhcccccccccce-eeee------cccceecccccccccccce-eeEeccccccccceeEEEECCccc
Confidence 6 66677889999999999999754 4444 3356788999999999765 666776555567899999987655
Q ss_pred cccCCcCccCCCCCCEEEccCCCCCCCCCccc-------------cCCCCccEEec-------cCccccCCCCCceEEcc
Q 035691 195 SGEIPSSLGNFTFLTELNLRGNSIRGSIPSAL-------------GNCHQLQSLDL-------SKTIFLGQYPVRWLDLS 254 (640)
Q Consensus 195 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-------------~~l~~L~~L~l-------s~n~~~~~~~l~~L~Ls 254 (640)
. +...+|.++.+++......+.........+ .....+..+.+ ....|.+...|+.+.+.
T Consensus 195 ~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp 273 (394)
T 4gt6_A 195 R-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMP 273 (394)
T ss_dssp E-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECC
T ss_pred c-cccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecc
Confidence 4 777889999999998887766542211111 11223333333 34567788889999998
Q ss_pred CCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCcccccc
Q 035691 255 HNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKS 334 (640)
Q Consensus 255 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 334 (640)
.+..+ +...+|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++++|+.+.+..+ ++...
T Consensus 274 ~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~ 349 (394)
T 4gt6_A 274 DSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIP 349 (394)
T ss_dssp TTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCC
T ss_pred cccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEh
Confidence 76554 678899999999999997 5566577789999999999999865 77777889999999999999755 55333
Q ss_pred CCcccCCCCCCCCCccccccCCC
Q 035691 335 QNGDVPRKGIFKNASAISVAGNE 357 (640)
Q Consensus 335 ~~~~~p~~~~~~~~~~~~~~~n~ 357 (640)
... .....+++.+.+.++.
T Consensus 350 ~~a----F~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 350 ESA----FSNCTALNNIEYSGSR 368 (394)
T ss_dssp GGG----GTTCTTCCEEEESSCH
T ss_pred HhH----hhCCCCCCEEEECCce
Confidence 221 1234567888888764
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.44 E-value=1.4e-13 Score=142.19 Aligned_cols=83 Identities=22% Similarity=0.225 Sum_probs=46.4
Q ss_pred EccC-CcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCcc
Q 035691 252 DLSH-NHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTF 330 (640)
Q Consensus 252 ~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 330 (640)
+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.++..|..++ |+.|+|++|+|
T Consensus 37 ~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 37 YIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp ECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred EccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCc
Confidence 4443 455544445555555555555555555555555555555566666666666555444555444 66666666666
Q ss_pred ccccC
Q 035691 331 QAKSQ 335 (640)
Q Consensus 331 ~~~~~ 335 (640)
.|.|.
T Consensus 116 ~c~c~ 120 (347)
T 2ifg_A 116 HCSCA 120 (347)
T ss_dssp CCCGG
T ss_pred cCCCc
Confidence 66554
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=3.8e-13 Score=138.83 Aligned_cols=103 Identities=22% Similarity=0.174 Sum_probs=74.8
Q ss_pred eEecCCC-CCCCcCcCCCCCCCCCEEEccC-CcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCc
Q 035691 163 IVSLNVN-SLRSIPISVGYLPKLQVLSLFE-NNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKT 240 (640)
Q Consensus 163 ~L~L~~N-~l~~ip~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n 240 (640)
.++++++ .|+.+|. +..+++|++|+|++ |.|+++.+..|.++++|++|+|++|+|++.+|..|.++++|+.|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L----- 85 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRL----- 85 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEE-----
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEE-----
Confidence 4567776 7777777 77777778888875 77777766777777777777777777777777777777777777
Q ss_pred cccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCccc
Q 035691 241 IFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLS 283 (640)
Q Consensus 241 ~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 283 (640)
+|++|+|++.++..|..++ |+.|+|++|.+.
T Consensus 86 -----------~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 86 -----------NLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp -----------ECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred -----------eCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 6666777766666666555 777777777765
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.40 E-value=1.8e-15 Score=157.21 Aligned_cols=144 Identities=19% Similarity=0.119 Sum_probs=72.5
Q ss_pred CCCCeeeccCCcccccCCccCc-CCCCCCEEECcCCccCccCCccc-----cCCCCCCEEEcccCcCCCCCCCccccccc
Q 035691 81 PNIRIPLLAGNQFFGNIPHSIS-NASKLEWLDFANNSLTASIPEDL-----GRLRNLTRLNFARNDLGTRKVNDLRFLDS 154 (640)
Q Consensus 81 ~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 154 (640)
++|+.|+|++|.|+......+. .+++|++|+|++|+|+......+ ...++|++|+|++|.|+...... ....
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~--l~~~ 178 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAV--LMEG 178 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHH--HHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHH--HHHH
Confidence 4555555555555432222222 23455666666666554333322 23455666666666654421111 1223
Q ss_pred ccCCCCcceEecCCCCCCC-----cCcCCCCCCCCCEEEccCCcCcccC----CcCccCCCCCCEEEccCCCCCCCCCcc
Q 035691 155 LVNCTYLEIVSLNVNSLRS-----IPISVGYLPKLQVLSLFENNISGEI----PSSLGNFTFLTELNLRGNSIRGSIPSA 225 (640)
Q Consensus 155 l~~l~~L~~L~L~~N~l~~-----ip~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~~~ 225 (640)
+..+++|++|+|++|.|+. ++..+...++|++|+|++|.|+... +..+...++|++|+|++|.|+......
T Consensus 179 L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 258 (372)
T 3un9_A 179 LAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQV 258 (372)
T ss_dssp HHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHH
T ss_pred HhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHH
Confidence 3445556666666666553 1233444556777777777665432 223344566777777777766443333
Q ss_pred c
Q 035691 226 L 226 (640)
Q Consensus 226 ~ 226 (640)
+
T Consensus 259 L 259 (372)
T 3un9_A 259 L 259 (372)
T ss_dssp H
T ss_pred H
Confidence 3
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.40 E-value=9.3e-15 Score=151.78 Aligned_cols=170 Identities=18% Similarity=0.161 Sum_probs=97.8
Q ss_pred CCCCeEEcccCccCccCCcCCC-----CCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccC
Q 035691 27 FQLRYIIFNSNTLQGQIPVNLT-----HCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSI 101 (640)
Q Consensus 27 ~~L~~L~l~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 101 (640)
+.|+.|+|++|.|+......+. ..++|++|||++|.|+... ...+...+++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~-----~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L 146 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAG-----LRTLLPVFLRARKLGLQLNSLGPEACKDL 146 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHH-----HHHTHHHHHTEEEEECCSSCCCHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHH-----HHHHHHHHHhccHhhcCCCCCCHHHHHHH
Confidence 4566666666666543322222 2256667777766654311 11222234566777777777664433333
Q ss_pred -----cCCCCCCEEECcCCccCcc----CCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCC
Q 035691 102 -----SNASKLEWLDFANNSLTAS----IPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLR 172 (640)
Q Consensus 102 -----~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 172 (640)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+...... ..+.+...++|+.|+|++|.|+
T Consensus 147 ~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~--L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 147 RDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLEL--LAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp HHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHH--HHHHGGGCSCCCEEECCSSCCC
T ss_pred HHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHH--HHHHHhcCCCcCeEECCCCCCC
Confidence 2356777777777777642 3334466777777777777776532111 1344556667777777777776
Q ss_pred Cc-----CcCCCCCCCCCEEEccCCcCcccCCcCcc
Q 035691 173 SI-----PISVGYLPKLQVLSLFENNISGEIPSSLG 203 (640)
Q Consensus 173 ~i-----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 203 (640)
.. +..+...++|++|+|++|.|+......+.
T Consensus 225 ~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 225 DTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 42 22344457788888888888755444443
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.33 E-value=1.6e-10 Score=120.59 Aligned_cols=283 Identities=10% Similarity=0.032 Sum_probs=159.4
Q ss_pred hhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccccCCccC
Q 035691 22 EIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFGNIPHSI 101 (640)
Q Consensus 22 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 101 (640)
++....+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++. ++...|... +|+.+.+..+ ++.+...+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~------Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF 110 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTS------IGDGAFADT-KLQSYTGMER-VKKFGDYVF 110 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCE------ECTTTTTTC-CCCEEEECTT-CCEECTTTT
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceE------echhhhcCC-CCceEECCce-eeEecccee
Confidence 455566777777753 456566677777777777777533 433 666666543 5666655433 554555566
Q ss_pred cCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCC--------
Q 035691 102 SNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRS-------- 173 (640)
Q Consensus 102 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~-------- 173 (640)
... +|+.+++..+ ++.+...+|.+. +|+.+.+..+ ++.+ ....|.++..++...+..+....
T Consensus 111 ~~~-~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i------~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~ 180 (379)
T 4h09_A 111 QGT-DLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTI------KDGIGYKAENLEKIEVSSNNKNYVAENYVLY 180 (379)
T ss_dssp TTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEE------CSCTTTTCTTCCEEEECTTCSSEEEETTEEE
T ss_pred ccC-CcccccCCCc-cccccccccccc-eeeeeeccce-eecc------ccchhcccccccccccccccceeecccceec
Confidence 553 6777777654 333444455443 4555544432 2222 12234444555554444332211
Q ss_pred -----cCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEeccCc-------c
Q 035691 174 -----IPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLDLSKT-------I 241 (640)
Q Consensus 174 -----ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n-------~ 241 (640)
....+.....+..+.+..+.-. .....+....+|+.+.+..+ +..+...+|.++.+|+.+.+.++ .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~v~~I~~~a 258 (379)
T 4h09_A 181 NKNKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKNVTSIGSFL 258 (379)
T ss_dssp ETTSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTTCCEECTTT
T ss_pred ccccceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCCccEeCccc
Confidence 1111222333444443333222 33444444555555555433 22234444555555555544332 2
Q ss_pred ccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCC
Q 035691 242 FLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLE 321 (640)
Q Consensus 242 ~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 321 (640)
|.+...++.+.+..+ ++.+...+|.++++|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++++|+
T Consensus 259 F~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 336 (379)
T 4h09_A 259 LQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALS 336 (379)
T ss_dssp TTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCC
Confidence 333334444466543 55456678888888999988888888677788888888998888755 6666778888888888
Q ss_pred eEeCcCC
Q 035691 322 GLDLFQN 328 (640)
Q Consensus 322 ~L~l~~N 328 (640)
.+.+..+
T Consensus 337 ~i~ip~~ 343 (379)
T 4h09_A 337 TISYPKS 343 (379)
T ss_dssp CCCCCTT
T ss_pred EEEECCc
Confidence 8887654
No 407
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=1.5e-11 Score=121.45 Aligned_cols=147 Identities=14% Similarity=0.082 Sum_probs=111.3
Q ss_pred HHhcCCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCCcceeEeeccCCcCCC
Q 035691 437 LKATGGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR-HRNLVKIITACSSSDFQGN 515 (640)
Q Consensus 437 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~ 515 (640)
.....+|+.....+.|+.+.||++.. .++.+++|+...........+.+|+++++.+. |..++++++++. ..
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~~ 82 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER-----HD 82 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-----ET
T ss_pred HHHhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-----cC
Confidence 34445688888889899999999875 36789999986432233346889999999884 677888998853 33
Q ss_pred ceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC----------------------
Q 035691 516 DFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHC---------------------- 573 (640)
Q Consensus 516 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~---------------------- 573 (640)
...++||||++|.++.+..... .....++.+++.++..||+..
T Consensus 83 ~~~~lv~e~i~G~~l~~~~~~~---------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (263)
T 3tm0_A 83 GWSNLLMSEADGVLCSEEYEDE---------------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLN 147 (263)
T ss_dssp TEEEEEEECCSSEEHHHHCCTT---------------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCeehhhccCCc---------------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHh
Confidence 4679999999999998763211 112467889999999999821
Q ss_pred ----------------------------------CCCeeeCCCCCCCeeeCCCCcEEEcccccccc
Q 035691 574 ----------------------------------KKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRF 605 (640)
Q Consensus 574 ----------------------------------~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~ 605 (640)
+..++|+|++|.||++++++.+.|+||+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 148 NDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 14589999999999998766678999998764
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.22 E-value=1.3e-09 Score=113.65 Aligned_cols=300 Identities=9% Similarity=0.069 Sum_probs=217.2
Q ss_pred CCCcEEeCCCCccccCCchhhhcCCCCCeEEcccCccCccCCcCCCCCCCCCEEEccCCCcCCccccccCCchhhcCCCC
Q 035691 3 TFLMLINLQQNNFSGNIPHEIGRLFQLRYIIFNSNTLQGQIPVNLTHCSELRTLDLVLNKLEENQLVGELPPYIGFTLPN 82 (640)
Q Consensus 3 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~lp~~~~~~l~~ 82 (640)
.+|+.+.+. ..++.+...+|.++.+|+.+.|..+ ++.+...+|.++ +|+.+.+..+ ++. ++...|. ..+
T Consensus 46 ~~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~------I~~~aF~-~~~ 114 (379)
T 4h09_A 46 DRISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKK------FGDYVFQ-GTD 114 (379)
T ss_dssp GGCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCE------ECTTTTT-TCC
T ss_pred cCCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeE------eccceec-cCC
Confidence 346666665 4577677789999999999999754 777888899987 6888887643 443 7777886 458
Q ss_pred CCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCcCCCCCCCcc------ccccccc
Q 035691 83 IRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARNDLGTRKVNDL------RFLDSLV 156 (640)
Q Consensus 83 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~------~~~~~l~ 156 (640)
|+.+.+..+ +..+...+|.+. +|+.+.+..+ ++.+...+|..+.+++.+.+..+.......... .....+.
T Consensus 115 L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYP 191 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECC
T ss_pred cccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccc
Confidence 999999876 444666677665 6777777654 565778889999999999888765433211100 0112344
Q ss_pred CCCCcceEecCCCCCCCcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCCCCCCccccCCCCccEEe
Q 035691 157 NCTYLEIVSLNVNSLRSIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIRGSIPSALGNCHQLQSLD 236 (640)
Q Consensus 157 ~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 236 (640)
.+..+..+.+..+.-......+....+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++.+...+|.++.+|+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 192 AAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 455555555554433323345566777888888655 44466778888888888888766 5556677888888888887
Q ss_pred ccC-------ccccCCCCCceEEccCCcCCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecCCccCCC
Q 035691 237 LSK-------TIFLGQYPVRWLDLSHNHLTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSINSFHGP 309 (640)
Q Consensus 237 ls~-------n~~~~~~~l~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 309 (640)
+.. ..|.+...|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++.+
T Consensus 270 l~~~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I 347 (379)
T 4h09_A 270 FYAKVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLI 347 (379)
T ss_dssp ECCCCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEE
T ss_pred ccccceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEE
Confidence 754 35677778888899999998778899999999999999865 77577789999999999999765 7767
Q ss_pred CCccCCCCCCC
Q 035691 310 IHPGLSSLKSL 320 (640)
Q Consensus 310 ~~~~~~~l~~L 320 (640)
...+|.+.+.+
T Consensus 348 ~~~aF~~c~~~ 358 (379)
T 4h09_A 348 ESGAFEGSSIT 358 (379)
T ss_dssp CTTTTTTSSCC
T ss_pred chhHhhCCCCC
Confidence 77788776433
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=2e-10 Score=113.13 Aligned_cols=139 Identities=17% Similarity=0.116 Sum_probs=97.0
Q ss_pred CCCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCC--CcceeEeeccCCcCCCcee
Q 035691 441 GGFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRN--LVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 441 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~~~~~ 518 (640)
.++....+.+.|..+.||++... +|..+++|+.... ....+..|+++++.+.+.+ +++++++.. .....
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~-----~~~~~ 90 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVT-----EAGRD 90 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE-----CSSCE
T ss_pred CCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEecc-----CCCCC
Confidence 34444444446667999999753 6778999987433 2245778999999886544 456777743 23457
Q ss_pred eEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------
Q 035691 519 ALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHC------------------------- 573 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~------------------------- 573 (640)
++||||++|.++. ... .. ...++.+++.++..||+..
T Consensus 91 ~~v~e~i~G~~l~--~~~-------------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
T 1nd4_A 91 WLLLGEVPGQDLL--SSH-------------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGL 152 (264)
T ss_dssp EEEEECCSSEETT--TSC-------------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTC
T ss_pred EEEEEecCCcccC--cCc-------------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCC
Confidence 8999999998874 211 11 1246777777888887632
Q ss_pred ------------------------------CCCeeeCCCCCCCeeeCCCCcEEEccccccccC
Q 035691 574 ------------------------------KKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFI 606 (640)
Q Consensus 574 ------------------------------~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~ 606 (640)
+..++|+|++|.||++++++.+.|+|||.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 153 VDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp CCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999988777789999998643
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.99 E-value=1.3e-10 Score=119.42 Aligned_cols=156 Identities=18% Similarity=0.255 Sum_probs=81.1
Q ss_pred CCCCCCeeeccCCcccccCCccCcCCCCCCEEECcCCccCccCCcccc--CCCCCCEEEccc--CcCC-CCCCCcccccc
Q 035691 79 TLPNIRIPLLAGNQFFGNIPHSISNASKLEWLDFANNSLTASIPEDLG--RLRNLTRLNFAR--NDLG-TRKVNDLRFLD 153 (640)
Q Consensus 79 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~--N~l~-~~~~~~~~~~~ 153 (640)
.+|+|+.|.|++|.-.. ++. +. +++|+.|+|..+.++......+. .+++|++|+|+. |... .....++. .
T Consensus 170 ~~P~L~~L~L~g~~~l~-l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~--~ 244 (362)
T 2ra8_A 170 AMPLLNNLKIKGTNNLS-IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR--P 244 (362)
T ss_dssp TCTTCCEEEEECCBTCB-CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG--G
T ss_pred cCCCCcEEEEeCCCCce-ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH--H
Confidence 35666666666652111 122 32 56677777776666543333333 567777777643 2211 10010110 1
Q ss_pred cc--cCCCCcceEecCCCCCCC-cCcCC---CCCCCCCEEEccCCcCcccC----CcCccCCCCCCEEEccCCCCCCCCC
Q 035691 154 SL--VNCTYLEIVSLNVNSLRS-IPISV---GYLPKLQVLSLFENNISGEI----PSSLGNFTFLTELNLRGNSIRGSIP 223 (640)
Q Consensus 154 ~l--~~l~~L~~L~L~~N~l~~-ip~~~---~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~ 223 (640)
.+ ..+++|+.|+|.+|.+.. .+..+ ..+++|++|+|+.|.|.+.. +..+..+++|+.|+|++|.|+...-
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~ 324 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMK 324 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHH
Confidence 11 235677777777777653 21111 24677888888888777532 3333456778888888887764322
Q ss_pred ccccC-CCCccEEeccCcc
Q 035691 224 SALGN-CHQLQSLDLSKTI 241 (640)
Q Consensus 224 ~~~~~-l~~L~~L~ls~n~ 241 (640)
..+.. + ...++++++.
T Consensus 325 ~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 325 KELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHC--CSEEECCSBC
T ss_pred HHHHHHc--CCEEEecCCc
Confidence 22322 1 2446555543
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.97 E-value=1.4e-10 Score=119.37 Aligned_cols=135 Identities=13% Similarity=0.219 Sum_probs=80.3
Q ss_pred ccCcCCCCCCEEECcCCc-cCccCCccccCCCCCCEEEcccCcCCCCCCCccccccccc--CCCCcceEecCC--CC---
Q 035691 99 HSISNASKLEWLDFANNS-LTASIPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLV--NCTYLEIVSLNV--NS--- 170 (640)
Q Consensus 99 ~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~--~l~~L~~L~L~~--N~--- 170 (640)
..+..+++|+.|+|++|. ++ .+. +. +++|++|+|..+.+... ....+. .+++|+.|+|+. |.
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~------~l~~l~~~~lp~L~~L~L~~~~~~~~~ 235 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDS------VVEDILGSDLPNLEKLVLYVGVEDYGF 235 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHH------HHHHHHHSBCTTCCEEEEECBCGGGTC
T ss_pred HHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChH------HHHHHHHccCCCCcEEEEecccccccc
Confidence 445667788888887773 32 222 33 67888888887776543 112232 567788887743 21
Q ss_pred ---CCCcCcCC--CCCCCCCEEEccCCcCcccCCcCc---cCCCCCCEEEccCCCCCCC----CCccccCCCCccEEecc
Q 035691 171 ---LRSIPISV--GYLPKLQVLSLFENNISGEIPSSL---GNFTFLTELNLRGNSIRGS----IPSALGNCHQLQSLDLS 238 (640)
Q Consensus 171 ---l~~ip~~~--~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~ls 238 (640)
+..+...+ ..+++|++|+|++|.+....+..+ ..+++|++|+|+.|.|... ++..+..+++|+.|+++
T Consensus 236 ~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~ 315 (362)
T 2ra8_A 236 DGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMK 315 (362)
T ss_dssp CSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECC
T ss_pred chhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECC
Confidence 11121222 236788888888887764332222 2467788888888887653 23334556778888777
Q ss_pred Ccccc
Q 035691 239 KTIFL 243 (640)
Q Consensus 239 ~n~~~ 243 (640)
.|.+.
T Consensus 316 ~n~i~ 320 (362)
T 2ra8_A 316 YNYLS 320 (362)
T ss_dssp SBBCC
T ss_pred CCcCC
Confidence 66543
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.92 E-value=5.4e-09 Score=108.09 Aligned_cols=145 Identities=14% Similarity=0.141 Sum_probs=104.1
Q ss_pred ccCcccccccceEEEEEECCCCeEEEEEEee--cccc-hhHHHHHHHHHHHHhcC--CCCCcceeEeeccCCcCCCceee
Q 035691 445 SANLIGTGSFGSVYKGILDPDQTVVAVKVLF--LHQR-GALKSFMAECEALRNIR--HRNLVKIITACSSSDFQGNDFKA 519 (640)
Q Consensus 445 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~~~~~~ 519 (640)
..+.++.|.++.||+.... +..+++|+.. .... .....+.+|+.+++.+. +..+++++.++..... ....+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~--~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV--IGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT--TSSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc--cCCeE
Confidence 3467899999999998764 4678888765 2221 22356788999999986 4568888888754421 13468
Q ss_pred EEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------
Q 035691 520 LVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHC-------------------------- 573 (640)
Q Consensus 520 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~-------------------------- 573 (640)
+||||++|..+.+... ..++...+..++.+++.+|..||...
T Consensus 118 ~vme~v~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQSL------------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQ 185 (359)
T ss_dssp EEEECCCCBCCCCTTC------------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCcc------------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHH
Confidence 9999999877643111 12566778889999999999999731
Q ss_pred -----------------------------CCCeeeCCCCCCCeeeCCCCc--EEEcccccccc
Q 035691 574 -----------------------------KKQIVHCDLKPSNVLLDNDMI--AHVGDFGLTRF 605 (640)
Q Consensus 574 -----------------------------~~~ivHrdlkp~NiLl~~~~~--~kl~DfGla~~ 605 (640)
...++|+|++|.||++++++. +.|+||+.+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 186 YKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999987753 68999999874
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.58 E-value=5.2e-09 Score=97.07 Aligned_cols=118 Identities=12% Similarity=0.102 Sum_probs=58.1
Q ss_pred cCcCCCCCCEEECcCC-ccCcc----CCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCC-
Q 035691 100 SISNASKLEWLDFANN-SLTAS----IPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRS- 173 (640)
Q Consensus 100 ~~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~- 173 (640)
.+...++|++|+|++| .|... +...+...++|++|+|++|.|....... ..+.+...+.|++|+|++|.|..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~--l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFA--LAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHH--HHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHH--HHHHHHhCCCcCEEECcCCcCCHH
Confidence 3445556666666666 55532 2233444556666666666665421111 11233344455555555555543
Q ss_pred ----cCcCCCCCCCCCEEEc--cCCcCcccC----CcCccCCCCCCEEEccCCCCC
Q 035691 174 ----IPISVGYLPKLQVLSL--FENNISGEI----PSSLGNFTFLTELNLRGNSIR 219 (640)
Q Consensus 174 ----ip~~~~~l~~L~~L~L--~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~ 219 (640)
+...+...++|++|+| ++|.|.... ...+...+.|++|+|++|.+.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2233444455666666 556655322 122333455666666665553
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=8.2e-09 Score=100.66 Aligned_cols=129 Identities=18% Similarity=0.257 Sum_probs=76.0
Q ss_pred EEcccCccCccCCc-CCCCCCCCCE--EEccCCCcCCccccccCCchhhcCCCCCCeeeccCCcccc--cCCccCcCCCC
Q 035691 32 IIFNSNTLQGQIPV-NLTHCSELRT--LDLVLNKLEENQLVGELPPYIGFTLPNIRIPLLAGNQFFG--NIPHSISNASK 106 (640)
Q Consensus 32 L~l~~N~l~~~~~~-~~~~l~~L~~--L~Ls~N~l~~~~~~~~lp~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~ 106 (640)
|...+|.-++.++- .|...+.|+. ++++.|+... +.+.+ ..+...+++|+.|+|++|+|++ .+|..+..+++
T Consensus 121 l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~--~~~~l-~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~ 197 (267)
T 3rw6_A 121 MSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSC--MAATL-RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPN 197 (267)
T ss_dssp HHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHH--HHHHH-HHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTT
T ss_pred HHhccchhccccCHHHcCCCcchhhcCccccCCHHHH--HHHHH-HHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCC
Confidence 34444444332222 2444455555 6677775432 22211 1223457888888888888887 34566778888
Q ss_pred CCEEECcCCccCccCCccccCCC--CCCEEEcccCcCCCCCCC-cccccccccCCCCcceEe
Q 035691 107 LEWLDFANNSLTASIPEDLGRLR--NLTRLNFARNDLGTRKVN-DLRFLDSLVNCTYLEIVS 165 (640)
Q Consensus 107 L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~-~~~~~~~l~~l~~L~~L~ 165 (640)
|+.|+|++|+|++. ..+..+. +|++|+|++|.+...-.. .-.....+..+++|+.||
T Consensus 198 L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 198 LKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 99999999988865 3344444 888999999988652100 000112356677787775
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.56 E-value=1.5e-08 Score=94.04 Aligned_cols=43 Identities=9% Similarity=0.029 Sum_probs=22.5
Q ss_pred hhhcCCCCCeEEcccC-ccCcc----CCcCCCCCCCCCEEEccCCCcC
Q 035691 22 EIGRLFQLRYIIFNSN-TLQGQ----IPVNLTHCSELRTLDLVLNKLE 64 (640)
Q Consensus 22 ~~~~l~~L~~L~l~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 64 (640)
.+...+.|++|+|++| .|... +...+...++|++|||++|.|.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 3444555666666666 55421 2233444555666666655554
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=1.3e-08 Score=99.16 Aligned_cols=43 Identities=28% Similarity=0.359 Sum_probs=25.5
Q ss_pred cCCCCCCEEECcCCccCcc--CCccccCCCCCCEEEcccCcCCCC
Q 035691 102 SNASKLEWLDFANNSLTAS--IPEDLGRLRNLTRLNFARNDLGTR 144 (640)
Q Consensus 102 ~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~ 144 (640)
.++++|++|+|++|+|+++ +|..+..+++|+.|+|++|+|+++
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~ 211 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 211 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc
Confidence 3456666666666666652 234455666666666666666554
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.44 E-value=8.4e-07 Score=89.91 Aligned_cols=137 Identities=18% Similarity=0.149 Sum_probs=95.1
Q ss_pred CCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCC----CCCcceeEeeccCCcCCCce
Q 035691 442 GFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRH----RNLVKIITACSSSDFQGNDF 517 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~~~~ 517 (640)
.+...+.++.|....||+. |..+++|+... ......+.+|.++++.+.+ ..+++++++ ..
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 4555678899999999997 55688887632 2223568899999998866 234455544 13
Q ss_pred eeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------
Q 035691 518 KALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHHC------------------------ 573 (640)
Q Consensus 518 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~~------------------------ 573 (640)
.++||||++|.++.+... ..++..+...++.+++..+..||+..
T Consensus 102 ~~lvme~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY------------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKK 169 (320)
T ss_dssp SCEEEECCCCBCCCHHHH------------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc------------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHH
Confidence 579999999988763221 11344455566667777776666431
Q ss_pred ------------------------------------CCCeeeCCCCCCCeeeCCCCcEEEccccccccC
Q 035691 574 ------------------------------------KKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFI 606 (640)
Q Consensus 574 ------------------------------------~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~ 606 (640)
...++|+|++|.||++++++.+.|+||+.+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 170 LLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 124599999999999998767799999998643
No 418
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.43 E-value=4.2e-07 Score=91.42 Aligned_cols=139 Identities=17% Similarity=0.191 Sum_probs=93.3
Q ss_pred cCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC-CCC--CcceeEeeccCCcCCCceeeEEe
Q 035691 446 ANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR-HRN--LVKIITACSSSDFQGNDFKALVY 522 (640)
Q Consensus 446 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~~~~~~~~~lv~ 522 (640)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +++++..+.... .....|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~--~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE--TYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS--SCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC--CCCcceEEE
Confidence 3568899999999863 35888885322 33467889999998873 333 445555432211 112357899
Q ss_pred eccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------
Q 035691 523 EFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHH------------------------------ 572 (640)
Q Consensus 523 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~------------------------------ 572 (640)
||++|..+.+... ..++..++..++.+++..+..||+.
T Consensus 96 ~~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 96 TKIKGVPLTPLLL------------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp ECCCCEECCHHHH------------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeECCcccc------------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999987754221 1144455566677777777777641
Q ss_pred -------------------------CCCCeeeCCCCCCCeeeCC--CCcEEEcccccccc
Q 035691 573 -------------------------CKKQIVHCDLKPSNVLLDN--DMIAHVGDFGLTRF 605 (640)
Q Consensus 573 -------------------------~~~~ivHrdlkp~NiLl~~--~~~~kl~DfGla~~ 605 (640)
....++|+|++|.||++++ ...+.|+||+.+..
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 1235899999999999998 56689999998864
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.33 E-value=2e-06 Score=85.44 Aligned_cols=77 Identities=18% Similarity=0.090 Sum_probs=59.9
Q ss_pred cccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCC---CCcceeEeeccCCcCCCceeeE
Q 035691 444 SSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHR---NLVKIITACSSSDFQGNDFKAL 520 (640)
Q Consensus 444 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~~~~~l 520 (640)
...+.||.|.++.||++... +|+.++||+...........|..|++.|+.+++. .+++++++. ..++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~l 87 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTL 87 (288)
T ss_dssp EEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEE
T ss_pred cceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEE
Confidence 34567999999999999875 7889999997543333346789999999999765 577887762 2479
Q ss_pred EeeccCCCCh
Q 035691 521 VYEFMHHGSL 530 (640)
Q Consensus 521 v~e~~~~g~L 530 (640)
||||++++.+
T Consensus 88 vme~l~g~~~ 97 (288)
T 3d1u_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEecccCCC
Confidence 9999999874
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.31 E-value=2.4e-06 Score=84.14 Aligned_cols=135 Identities=18% Similarity=0.102 Sum_probs=91.6
Q ss_pred ccccccc-eEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCCcceeEeeccCCcCCCceeeEEeeccC
Q 035691 449 IGTGSFG-SVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR-HRNLVKIITACSSSDFQGNDFKALVYEFMH 526 (640)
Q Consensus 449 lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~~~~lv~e~~~ 526 (640)
+..|..| .||+.....++..+++|+-.. +....+.+|..+|+.+. +--+.++++++.. .+..++|||+++
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-----~~~~~lvme~l~ 103 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRT-----PDDAWLLTTAIP 103 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-----TTEEEEEEECCC
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEE-----CCeEEEEEEeeC
Confidence 4455555 699988776778899998643 33466888999998874 4446778877543 346789999999
Q ss_pred CCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 035691 527 HGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHH---------------------------------- 572 (640)
Q Consensus 527 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~---------------------------------- 572 (640)
|.++.+...... .....++.+++..+.-||..
T Consensus 104 G~~~~~~~~~~~--------------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (272)
T 4gkh_A 104 GKTAFQVLEEYP--------------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDD 169 (272)
T ss_dssp SEEHHHHHHHCG--------------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCG
T ss_pred CccccccccCCH--------------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccc
Confidence 987765432110 01223444555555555531
Q ss_pred ---------------------CCCCeeeCCCCCCCeeeCCCCcEEEcccccccc
Q 035691 573 ---------------------CKKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRF 605 (640)
Q Consensus 573 ---------------------~~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~ 605 (640)
....++|+|+.+.||++++++.+-|+||+.+..
T Consensus 170 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 170 ERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp GGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012378999999999999888788999998864
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.29 E-value=3.7e-06 Score=84.48 Aligned_cols=138 Identities=14% Similarity=0.100 Sum_probs=89.2
Q ss_pred cCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCC---CCcceeEeeccCCcCCCceeeEEe
Q 035691 446 ANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHR---NLVKIITACSSSDFQGNDFKALVY 522 (640)
Q Consensus 446 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~~~~~~lv~ 522 (640)
.+.++.|....||+. |..+++|+-. .......+..|.++|+.+.+. .+.+.+.++.. .....++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEEEE
Confidence 345788888899987 4557888742 223346789999999999653 35666666531 233567999
Q ss_pred eccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------
Q 035691 523 EFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINVASALEYLHHH------------------------------ 572 (640)
Q Consensus 523 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~yLH~~------------------------------ 572 (640)
||++|..+.+.... .++......++.+++..|..||+.
T Consensus 93 e~i~G~~l~~~~~~------------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~ 160 (306)
T 3tdw_A 93 RKVQGQILGEDGMA------------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQV 160 (306)
T ss_dssp ECCCSEECHHHHHT------------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHT
T ss_pred eccCCeECchhhhh------------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 99999877652110 022233333444444444444432
Q ss_pred ---------------------------CCCCeeeCCCCCCCeeeCC---CCc-EEEccccccccC
Q 035691 573 ---------------------------CKKQIVHCDLKPSNVLLDN---DMI-AHVGDFGLTRFI 606 (640)
Q Consensus 573 ---------------------------~~~~ivHrdlkp~NiLl~~---~~~-~kl~DfGla~~~ 606 (640)
.+..++|+|++|.||++++ ++. +.|+||+.+...
T Consensus 161 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred ccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1245799999999999987 355 589999988643
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.12 E-value=1.4e-05 Score=82.31 Aligned_cols=150 Identities=14% Similarity=0.176 Sum_probs=89.3
Q ss_pred ccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCC--CcceeEeeccCCcCCCceeeEEe
Q 035691 445 SANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRN--LVKIITACSSSDFQGNDFKALVY 522 (640)
Q Consensus 445 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~~~~~~lv~ 522 (640)
..+.++.|....+|+... ++..+++|+.... ..+..|+.+++.+.... +.+++.++.... ...++||
T Consensus 45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~lv~ 113 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYCIS 113 (362)
T ss_dssp EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEEEE
T ss_pred eEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEEEE
Confidence 346688899999999875 5788999987322 25788999999886433 566776653321 3578999
Q ss_pred eccCCCChhhhc------------------CCCCCCC-----CCC-----------------CCCCCCCHHHH------H
Q 035691 523 EFMHHGSLESWL------------------HPESASD-----DLN-----------------YSPSILSFLQR------L 556 (640)
Q Consensus 523 e~~~~g~L~~~l------------------~~~~~~~-----~~~-----------------~~~~~~~~~~~------~ 556 (640)
||++|..+.+.- +...... ... .......|... .
T Consensus 114 e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~ 193 (362)
T 3ovc_A 114 RRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSA 193 (362)
T ss_dssp ECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHH
T ss_pred EecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 999986654210 0000000 000 00000011110 1
Q ss_pred HHHHHHHHHHHHHhcCC-CCCeeeCCCCCCCeeeCCCCcEEEcccccccc
Q 035691 557 NIAINVASALEYLHHHC-KKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRF 605 (640)
Q Consensus 557 ~i~~~i~~al~yLH~~~-~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~ 605 (640)
.....+....+++.... .+.++|+|+.|.||++++++.+.|+||+.+..
T Consensus 194 ~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 194 SVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred cchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 11122222333332211 25689999999999998888889999998864
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.94 E-value=2.3e-05 Score=80.47 Aligned_cols=85 Identities=8% Similarity=-0.030 Sum_probs=55.2
Q ss_pred cCcc-cccccceEEEEEEC--C----CCeEEEEEEeeccc---chhHHHHHHHHHHHHhcC-C--CCCcceeEeeccCCc
Q 035691 446 ANLI-GTGSFGSVYKGILD--P----DQTVVAVKVLFLHQ---RGALKSFMAECEALRNIR-H--RNLVKIITACSSSDF 512 (640)
Q Consensus 446 ~~~l-g~G~~g~Vy~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~~~ 512 (640)
.+.| +.|....+|+.... . ++..+++|+..... ......+..|+.+++.+. + -.+.+++.++.....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78888999988653 1 16678889764322 101245678888888874 3 357788887643321
Q ss_pred CCCceeeEEeeccCCCChhh
Q 035691 513 QGNDFKALVYEFMHHGSLES 532 (640)
Q Consensus 513 ~~~~~~~lv~e~~~~g~L~~ 532 (640)
....++||||++|..+.+
T Consensus 105 --~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 --LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp --TSSCEEEEECCCCBCCCB
T ss_pred --cCCceEEEEecCCCChhh
Confidence 124579999999877654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.92 E-value=3.7e-05 Score=80.25 Aligned_cols=76 Identities=14% Similarity=0.134 Sum_probs=48.5
Q ss_pred cCcccccccceEEEEEECCCCeEEEEEEeecccc-------hhHHHHHHHHHHHHhcCC--C-CCcceeEeeccCCcCCC
Q 035691 446 ANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQR-------GALKSFMAECEALRNIRH--R-NLVKIITACSSSDFQGN 515 (640)
Q Consensus 446 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~-niv~l~~~~~~~~~~~~ 515 (640)
.+.+|.|.++.||+++...+++.|+||......+ .....+..|.++++.+.. + .+++++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~ 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence 4578999999999997765678899998643211 123456788888887742 3 345666542 1
Q ss_pred ceeeEEeeccCCC
Q 035691 516 DFKALVYEFMHHG 528 (640)
Q Consensus 516 ~~~~lv~e~~~~g 528 (640)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 2347999999764
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.87 E-value=2.2e-05 Score=67.55 Aligned_cols=65 Identities=18% Similarity=0.206 Sum_probs=53.1
Q ss_pred CEEECCCCccc-CcCCccccCCCCCCeEEecCCccCCCCCccCCCCCCCCeEeCcCCccccccCCccc
Q 035691 273 PHLDLSKNKLS-GEIPSSLGSCVGLEYLNLSINSFHGPIHPGLSSLKSLEGLDLFQNTFQAKSQNGDV 339 (640)
Q Consensus 273 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 339 (640)
..++.+++.|+ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|+|.|.+...++
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l 76 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPL 76 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHH
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHH
Confidence 47888888886 35665554 3689999999999988888899999999999999999998875433
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.81 E-value=0.00018 Score=73.06 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=28.5
Q ss_pred CCCeeeCCCCCCCeeeCCCCcEEEcccccccc
Q 035691 574 KKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRF 605 (640)
Q Consensus 574 ~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~ 605 (640)
+..++|+|+++.||+++.++.+.|+||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 36899999999999998888999999998753
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.57 E-value=1.7e-05 Score=71.65 Aligned_cols=12 Identities=25% Similarity=0.235 Sum_probs=5.3
Q ss_pred CCCCCEEEccCC
Q 035691 181 LPKLQVLSLFEN 192 (640)
Q Consensus 181 l~~L~~L~L~~N 192 (640)
+++|++|+|+++
T Consensus 138 ~~~L~~L~L~~c 149 (176)
T 3e4g_A 138 FRNLKYLFLSDL 149 (176)
T ss_dssp CTTCCEEEEESC
T ss_pred CCCCCEEECCCC
Confidence 344444444443
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.56 E-value=0.0003 Score=69.66 Aligned_cols=78 Identities=18% Similarity=0.096 Sum_probs=56.2
Q ss_pred CCcccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCC---CCCcceeEeeccCCcCCCcee
Q 035691 442 GFSSANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRH---RNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 442 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~~~~~~~~~ 518 (640)
.+...+.+|.|..+.||+.+.. +|+.|.||+-..........|..|++.|+.+.- -.+++++++. ..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cc
Confidence 3455677899999999999886 789999998754433334568899999988742 2455666542 13
Q ss_pred eEEeeccCCCC
Q 035691 519 ALVYEFMHHGS 529 (640)
Q Consensus 519 ~lv~e~~~~g~ 529 (640)
++||||++++.
T Consensus 86 ~lv~e~l~~~~ 96 (288)
T 3f7w_A 86 TLAMEWVDERP 96 (288)
T ss_dssp EEEEECCCCCC
T ss_pred eEEEEeecccC
Confidence 68999998764
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.53 E-value=1.3e-05 Score=72.38 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=15.8
Q ss_pred CCCEEEccCCcCcccCCcCccCCCCCCEEEccCC
Q 035691 183 KLQVLSLFENNISGEIPSSLGNFTFLTELNLRGN 216 (640)
Q Consensus 183 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 216 (640)
+|+.||++++.|+...-..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3555555555544333333444444444444444
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.53 E-value=1.8e-05 Score=72.83 Aligned_cols=115 Identities=10% Similarity=0.159 Sum_probs=60.1
Q ss_pred cCCCCCCEEECcCC-ccCcc----CCccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCCCCC---
Q 035691 102 SNASKLEWLDFANN-SLTAS----IPEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNSLRS--- 173 (640)
Q Consensus 102 ~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~--- 173 (640)
.+-+.|++|+|++| +|... +..++..-+.|+.|+|++|+|.......+ .+.+..-+.|+.|+|+.|.|..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~al--A~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGL--IELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTH--HHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHH--HHHHhcCCccCeEecCCCcCCHHHH
Confidence 34456666666664 55421 23345555666777777776654422221 2334445566666666666653
Q ss_pred --cCcCCCCCCCCCEEEccCCcC---ccc----CCcCccCCCCCCEEEccCCCC
Q 035691 174 --IPISVGYLPKLQVLSLFENNI---SGE----IPSSLGNFTFLTELNLRGNSI 218 (640)
Q Consensus 174 --ip~~~~~l~~L~~L~L~~N~l---~~~----~p~~~~~l~~L~~L~L~~N~l 218 (640)
+-..+..-+.|++|+|++|.. ... +...+..-+.|+.|+++.|.+
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 222344445577777765432 211 122344445666666665543
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.43 E-value=0.00023 Score=61.10 Aligned_cols=56 Identities=25% Similarity=0.299 Sum_probs=39.8
Q ss_pred ceEecCCCCCC--CcCcCCCCCCCCCEEEccCCcCcccCCcCccCCCCCCEEEccCCCCC
Q 035691 162 EIVSLNVNSLR--SIPISVGYLPKLQVLSLFENNISGEIPSSLGNFTFLTELNLRGNSIR 219 (640)
Q Consensus 162 ~~L~L~~N~l~--~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 219 (640)
..++.+++.|+ .+|..+. ++|++|+|++|+|+.+.++.|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36677777777 6775543 46777788888777666667777777777777777664
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.42 E-value=2.1e-05 Score=72.45 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=49.3
Q ss_pred cCcCCCCCCEEECcCCccCccC----CccccCCCCCCEEEcccCcCCCCCCCcccccccccCCCCcceEecCCCC---CC
Q 035691 100 SISNASKLEWLDFANNSLTASI----PEDLGRLRNLTRLNFARNDLGTRKVNDLRFLDSLVNCTYLEIVSLNVNS---LR 172 (640)
Q Consensus 100 ~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~---l~ 172 (640)
++..-+.|+.|+|++|+|.... ..++..-+.|++|+|++|.|+...... +.+.+..-+.|+.|+|++|. +.
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a--la~aL~~N~tL~~L~L~n~~~~~ig 142 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR--LLRSTLVTQSIVEFKADNQRQSVLG 142 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH--HHHHTTTTCCCSEEECCCCSSCCCC
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH--HHHHHhhCCceeEEECCCCcCcCcC
Confidence 3444556666666666665322 223334566677777777665432211 12344445557777776542 22
Q ss_pred C-----cCcCCCCCCCCCEEEccCCcCc
Q 035691 173 S-----IPISVGYLPKLQVLSLFENNIS 195 (640)
Q Consensus 173 ~-----ip~~~~~l~~L~~L~L~~N~l~ 195 (640)
. +-..+..-++|+.|+++.|.+.
T Consensus 143 ~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 143 NQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 1 1122333456777777766543
No 433
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.41 E-value=0.00097 Score=66.62 Aligned_cols=76 Identities=16% Similarity=0.106 Sum_probs=57.0
Q ss_pred ccCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcC---CCCCcceeEeeccCCcCCCceeeEE
Q 035691 445 SANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIR---HRNLVKIITACSSSDFQGNDFKALV 521 (640)
Q Consensus 445 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~~~~~~lv 521 (640)
..+.|+.|.+..+|+... ++..++||+.... ....+..|.+.|+.+. ...+++++.++.. ....++|
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-----~g~~~lv 109 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----QGHSFLL 109 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-----SSEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-----CCceEEE
Confidence 346789999999999875 4677889987532 3467889999888873 3567888887532 2467999
Q ss_pred eeccCCCCh
Q 035691 522 YEFMHHGSL 530 (640)
Q Consensus 522 ~e~~~~g~L 530 (640)
|||+++..+
T Consensus 110 me~l~G~~~ 118 (312)
T 3jr1_A 110 LEALNKSKN 118 (312)
T ss_dssp EECCCCCCC
T ss_pred EEeccCCCC
Confidence 999998764
No 434
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.23 E-value=0.001 Score=69.76 Aligned_cols=31 Identities=23% Similarity=0.384 Sum_probs=27.6
Q ss_pred CCeeeCCCCCCCeeeCCCCcEEEccccccccC
Q 035691 575 KQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFI 606 (640)
Q Consensus 575 ~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~ 606 (640)
..++|+|++|.||++++++ ++++||+.+...
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 6899999999999998776 999999988743
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.85 E-value=0.0034 Score=62.40 Aligned_cols=71 Identities=8% Similarity=0.039 Sum_probs=41.7
Q ss_pred cCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCC-cceeEeeccCCcCCCceeeEEeec
Q 035691 446 ANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNL-VKIITACSSSDFQGNDFKALVYEF 524 (640)
Q Consensus 446 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~~~~~lv~e~ 524 (640)
.+.|+.|....+|+. ..+++|+........ .....|+.+++.+...++ .++++++. +.-++|+||
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~~-------~~~~~v~e~ 88 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVDP-------ATGVMVTRY 88 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEECT-------TTCCEEEEC
T ss_pred eeEcCCcccccccee------eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEEC-------CCCEEEEee
Confidence 567888989999998 347888774321111 122467777776642222 46665521 123689999
Q ss_pred c-CCCCh
Q 035691 525 M-HHGSL 530 (640)
Q Consensus 525 ~-~~g~L 530 (640)
+ ++.++
T Consensus 89 i~~g~~l 95 (301)
T 3dxq_A 89 IAGAQTM 95 (301)
T ss_dssp CTTCEEC
T ss_pred cCCCccC
Confidence 9 55433
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.79 E-value=0.0036 Score=62.87 Aligned_cols=171 Identities=12% Similarity=0.089 Sum_probs=85.1
Q ss_pred cCHHHHHHhcCCCcc-----cCcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCC--Ccce
Q 035691 431 VSYESLLKATGGFSS-----ANLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRN--LVKI 503 (640)
Q Consensus 431 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l 503 (640)
++.+++......|.. .+.++.|....+|+.... +| .+++|+..... ..+.+..|+.++..+...+ ++++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 344444444444433 245677888899998764 34 68899885421 1234556777777664222 3444
Q ss_pred eEeeccCCc-CCCceeeEEeeccCCCChhh-----------h---cCC--CCCCCCCCCCCCCCCHHHHHH---------
Q 035691 504 ITACSSSDF-QGNDFKALVYEFMHHGSLES-----------W---LHP--ESASDDLNYSPSILSFLQRLN--------- 557 (640)
Q Consensus 504 ~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~-----------~---l~~--~~~~~~~~~~~~~~~~~~~~~--------- 557 (640)
+.......+ ......+++|+|++|..+.. . ++. ...............|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 332111000 11234689999999865321 0 110 000000000000011211100
Q ss_pred ---HHHHHHHHHHHHhcC----CCCCeeeCCCCCCCeeeCCCCcEEEcccccccc
Q 035691 558 ---IAINVASALEYLHHH----CKKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRF 605 (640)
Q Consensus 558 ---i~~~i~~al~yLH~~----~~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~ 605 (640)
+...+...++++... .+..++|+|+.+.||++++++.+.|+||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234445555432 235789999999999999876678999988753
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.67 E-value=0.0032 Score=66.06 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=47.8
Q ss_pred CcccccccceEEEEEECC-------CCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCC-cceeEeeccCCcCCCcee
Q 035691 447 NLIGTGSFGSVYKGILDP-------DQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNL-VKIITACSSSDFQGNDFK 518 (640)
Q Consensus 447 ~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~~~~ 518 (640)
+.|+.|-...||++.... ++..|++|+.... +....+..|..+++.+...++ +++++.+ .+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~---- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-----SG---- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT----
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC----
Confidence 457778888999998753 2578889987321 112456689998888743333 6676653 11
Q ss_pred eEEeeccCCCCh
Q 035691 519 ALVYEFMHHGSL 530 (640)
Q Consensus 519 ~lv~e~~~~g~L 530 (640)
.+||||++|..+
T Consensus 148 g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 GRLEEYIPSRPL 159 (429)
T ss_dssp EEEECCCCEEEC
T ss_pred CEEEEEeCCccc
Confidence 278999986443
No 438
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.54 E-value=0.013 Score=58.98 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=27.7
Q ss_pred CCCeeeCCCCCCCeeeCCC----CcEEEcccccccc
Q 035691 574 KKQIVHCDLKPSNVLLDND----MIAHVGDFGLTRF 605 (640)
Q Consensus 574 ~~~ivHrdlkp~NiLl~~~----~~~kl~DfGla~~ 605 (640)
+..++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3579999999999999874 6899999998864
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.53 E-value=0.0041 Score=63.84 Aligned_cols=146 Identities=12% Similarity=0.108 Sum_probs=81.7
Q ss_pred CcccccccceEEEEEECC-------CCeEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCCcceeEeeccCCcCCCcee
Q 035691 447 NLIGTGSFGSVYKGILDP-------DQTVVAVKVLFLHQRGALKSFMAECEALRNIR-HRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 447 ~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~~~ 518 (640)
+.+..|-...+|++.... +++.|++|+... .........+|.++++.+. +.-..++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~-----~---- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFP-----E---- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET-----T----
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC-----C----
Confidence 456677788999988742 357888988622 1123456678999988874 333356666632 1
Q ss_pred eEEeeccCCCChhhh-c----------------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----------------
Q 035691 519 ALVYEFMHHGSLESW-L----------------HPESASDDLNYSPSILSFLQRLNIAINVAS----------------- 564 (640)
Q Consensus 519 ~lv~e~~~~g~L~~~-l----------------~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~----------------- 564 (640)
.+||||++|..+..- + +.... . ...+...-+.++.++..++..
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~--~-~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l 202 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEM--P-FTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL 202 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCC--S-SCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCC--C-CCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence 289999998554310 0 11100 0 000111123444555544322
Q ss_pred --HHHHHh----c-CCCCCeeeCCCCCCCeeeCCC----CcEEEcccccccc
Q 035691 565 --ALEYLH----H-HCKKQIVHCDLKPSNVLLDND----MIAHVGDFGLTRF 605 (640)
Q Consensus 565 --al~yLH----~-~~~~~ivHrdlkp~NiLl~~~----~~~kl~DfGla~~ 605 (640)
.+.+|. . ..+..++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 233332 1 123468999999999999876 7899999998763
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.41 E-value=0.012 Score=62.09 Aligned_cols=74 Identities=16% Similarity=0.070 Sum_probs=46.3
Q ss_pred CcccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCC-cceeEeeccCCcCCCceeeEEeecc
Q 035691 447 NLIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNL-VKIITACSSSDFQGNDFKALVYEFM 525 (640)
Q Consensus 447 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~~~~~~lv~e~~ 525 (640)
+.|+.|-...+|++....++..+++|+........ -....|..+++.+...++ +++++++ . + ..||||+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~-----~--~--G~v~e~I 183 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF-----T--N--GRIEEFM 183 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE-----T--T--EEEEECC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe-----C--C--eEEEEee
Confidence 56777888999999886445788899873322111 112578888888864444 5666663 1 1 2599999
Q ss_pred CCCCh
Q 035691 526 HHGSL 530 (640)
Q Consensus 526 ~~g~L 530 (640)
+|..+
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 87444
No 441
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.41 E-value=0.027 Score=56.46 Aligned_cols=78 Identities=10% Similarity=0.076 Sum_probs=46.6
Q ss_pred cccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCC--CcceeEeeccCC-cCCCceeeEEeec
Q 035691 448 LIGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRN--LVKIITACSSSD-FQGNDFKALVYEF 524 (640)
Q Consensus 448 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~-~~~~~~~~lv~e~ 524 (640)
.++ |....||+.... +|+.+++|+..... .....+..|..++..+.... +++++.. .... .......++||||
T Consensus 33 ~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~-~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF-NGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB-TTBSCEEETTEEEEEEEC
T ss_pred eec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec-CCcEEEEECCEEEEEEEe
Confidence 455 777899987654 56678999985321 12356677888887774222 3444433 1110 1113356789999
Q ss_pred cCCCC
Q 035691 525 MHHGS 529 (640)
Q Consensus 525 ~~~g~ 529 (640)
++|..
T Consensus 109 i~G~~ 113 (328)
T 1zyl_A 109 VGGRQ 113 (328)
T ss_dssp CCCEE
T ss_pred cCCCC
Confidence 98754
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.11 E-value=0.018 Score=58.18 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=27.7
Q ss_pred CCeeeCCCCCCCeeeCCCCcEEEcccccccc
Q 035691 575 KQIVHCDLKPSNVLLDNDMIAHVGDFGLTRF 605 (640)
Q Consensus 575 ~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~ 605 (640)
..++|+|+.+.||++++++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 5789999999999999888899999987764
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.97 E-value=0.012 Score=60.36 Aligned_cols=74 Identities=15% Similarity=0.182 Sum_probs=42.4
Q ss_pred CcccccccceEEEEEECC--------CCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCC-CcceeEeeccCCcCCCce
Q 035691 447 NLIGTGSFGSVYKGILDP--------DQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRN-LVKIITACSSSDFQGNDF 517 (640)
Q Consensus 447 ~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~~~~ 517 (640)
..++.|....+|+..... .+..+++|+...... .......|.++++.+...+ .+++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~---- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF-----N---- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE-----T----
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec-----C----
Confidence 456778788999988652 136788888643221 1112357888888774333 44666542 1
Q ss_pred eeEEeeccCCCCh
Q 035691 518 KALVYEFMHHGSL 530 (640)
Q Consensus 518 ~~lv~e~~~~g~L 530 (640)
-++||||++|..+
T Consensus 109 ~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 GGRIEEWLYGDPL 121 (369)
T ss_dssp TEEEEECCCSEEC
T ss_pred CcEEEEEecCCcC
Confidence 2589999987543
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.74 E-value=0.11 Score=53.51 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=27.1
Q ss_pred CCeeeCCCCCCCeeeCCC------CcEEEcccccccc
Q 035691 575 KQIVHCDLKPSNVLLDND------MIAHVGDFGLTRF 605 (640)
Q Consensus 575 ~~ivHrdlkp~NiLl~~~------~~~kl~DfGla~~ 605 (640)
..++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 468999999999999876 7899999988763
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.19 E-value=0.11 Score=53.99 Aligned_cols=74 Identities=14% Similarity=0.147 Sum_probs=45.3
Q ss_pred CcccccccceEEEEEECCC-------CeEEEEEEeecccchhHHHHHHHHHHHHhcC-CCCCcceeEeeccCCcCCCcee
Q 035691 447 NLIGTGSFGSVYKGILDPD-------QTVVAVKVLFLHQRGALKSFMAECEALRNIR-HRNLVKIITACSSSDFQGNDFK 518 (640)
Q Consensus 447 ~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~~~~~ 518 (640)
+.+..|-...+|+...... +..|++|+...... ..-...+|.++++.+. +.-..++++.+ . -
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~-----~----~ 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADF-----P----E 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE-----T----T
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc-----C----C
Confidence 4566677888999887521 57788888633221 1112357888887774 32245555542 1 2
Q ss_pred eEEeeccCCCCh
Q 035691 519 ALVYEFMHHGSL 530 (640)
Q Consensus 519 ~lv~e~~~~g~L 530 (640)
+.||||++|..+
T Consensus 146 ~~I~efI~G~~l 157 (424)
T 3mes_A 146 GRIEEFIDGEPL 157 (424)
T ss_dssp EEEEECCCSEEC
T ss_pred CEEEEEeCCccC
Confidence 589999998653
No 446
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=87.81 E-value=0.066 Score=56.46 Aligned_cols=61 Identities=11% Similarity=0.007 Sum_probs=18.0
Q ss_pred ccCcccccccceEEEEEECCCCeEEEE------EEeecc--cchhHHHHHHHHHHHHhcCCCCCcceeEeec
Q 035691 445 SANLIGTGSFGSVYKGILDPDQTVVAV------KVLFLH--QRGALKSFMAECEALRNIRHRNLVKIITACS 508 (640)
Q Consensus 445 ~~~~lg~G~~g~Vy~~~~~~~~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 508 (640)
..+.+| ||.||+|.+.....+||| |..+.. .+.....|.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 446676 999999999755568888 665322 2223457889999999999999999988753
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.20 E-value=0.12 Score=53.42 Aligned_cols=30 Identities=23% Similarity=0.380 Sum_probs=25.1
Q ss_pred CeeeCCCCCCCeee------CCCCcEEEcccccccc
Q 035691 576 QIVHCDLKPSNVLL------DNDMIAHVGDFGLTRF 605 (640)
Q Consensus 576 ~ivHrdlkp~NiLl------~~~~~~kl~DfGla~~ 605 (640)
.++|+|+.+.||++ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567899999998763
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=83.56 E-value=0.58 Score=30.81 Aligned_cols=30 Identities=17% Similarity=0.052 Sum_probs=15.1
Q ss_pred CeeeehhhhhhHHHHHHHHHh-hhheeeccc
Q 035691 384 GFKLMIPLLSGLVGLVLVMSL-LIIDRLRRK 413 (640)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~-~~~~r~rr~ 413 (640)
...|+.+++.+++++++++.. ++++|+|+.
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 344666666666655544433 344444433
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=79.89 E-value=0.69 Score=30.38 Aligned_cols=29 Identities=21% Similarity=0.188 Sum_probs=13.8
Q ss_pred eeeehhhhhhHHHHHHHHH-hhhheeeccc
Q 035691 385 FKLMIPLLSGLVGLVLVMS-LLIIDRLRRK 413 (640)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~-~~~~~r~rr~ 413 (640)
..|+.+++.+++++++++. +++++|+|++
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 3455566655555444433 3344444433
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=66.34 E-value=1.9 Score=28.23 Aligned_cols=10 Identities=20% Similarity=0.547 Sum_probs=3.7
Q ss_pred hhhHHHHHHH
Q 035691 392 LSGLVGLVLV 401 (640)
Q Consensus 392 ~~~~~~~~~~ 401 (640)
++++++++++
T Consensus 18 vVGvll~vi~ 27 (44)
T 2jwa_A 18 VVGILLVVVL 27 (44)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=66.19 E-value=7.3 Score=30.89 Aligned_cols=48 Identities=10% Similarity=0.084 Sum_probs=32.0
Q ss_pred cccccCCccCcCCCCCCEEECcCCccCccCCccccCCCCCCEEEcccCc
Q 035691 92 QFFGNIPHSISNASKLEWLDFANNSLTASIPEDLGRLRNLTRLNFARND 140 (640)
Q Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 140 (640)
.++.+...+|.++++|+.+.+-.+ ++.+-..+|.++.+|+.+.+....
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 445556667777777777777665 454666677777777777776643
No 452
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=65.61 E-value=2.6 Score=27.21 Aligned_cols=14 Identities=21% Similarity=0.254 Sum_probs=6.9
Q ss_pred eeehhhhhhHHHHH
Q 035691 386 KLMIPLLSGLVGLV 399 (640)
Q Consensus 386 ~~~~~~~~~~~~~~ 399 (640)
.++++++.++++++
T Consensus 14 ~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 14 AVIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred EEEeehhHHHHHHH
Confidence 34455555555544
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=65.23 E-value=18 Score=28.54 Aligned_cols=45 Identities=18% Similarity=0.172 Sum_probs=22.0
Q ss_pred CCCCCCccCCCCCCCCEEECCCCcccCcCCccccCCCCCCeEEecC
Q 035691 258 LTGPIPLAVGNLKSIPHLDLSKNKLSGEIPSSLGSCVGLEYLNLSI 303 (640)
Q Consensus 258 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 303 (640)
++.+...+|.++++|+.+.+-.+ ++.+...+|.+|.+|+.+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34344445555555555555443 2224444555555555555544
No 454
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=61.98 E-value=17 Score=33.28 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCCCCCeeeCCCCcEEEccccccccCC
Q 035691 550 LSFLQRLNIAINVASALEYLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFIP 607 (640)
Q Consensus 550 ~~~~~~~~i~~~i~~al~yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~ 607 (640)
.+...+++++..|+...++++. -+|--+.|+|++++.++.+++.=.|+...++
T Consensus 78 ~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~ 130 (215)
T 4ann_A 78 FTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTRDGLPIAKTRGLQNVVD 130 (215)
T ss_dssp SCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECTTSCEEESCCEETTTBS
T ss_pred cCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcCCCCEEEEEccCccCCC
Confidence 6778899999999998877764 3788999999999999999999999865543
No 455
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=59.39 E-value=11 Score=34.65 Aligned_cols=53 Identities=17% Similarity=0.305 Sum_probs=44.3
Q ss_pred CCHHHHHHHHHHHHHHHH-HHhcCCCCCeeeCCCCCCCeeeCCCCcEEEccccccccCC
Q 035691 550 LSFLQRLNIAINVASALE-YLHHHCKKQIVHCDLKPSNVLLDNDMIAHVGDFGLTRFIP 607 (640)
Q Consensus 550 ~~~~~~~~i~~~i~~al~-yLH~~~~~~ivHrdlkp~NiLl~~~~~~kl~DfGla~~~~ 607 (640)
.+...+++++..++.... +++. -+|--+.|+||++|.++.+++.-.|+-..++
T Consensus 82 ~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~lp 135 (219)
T 4ano_A 82 TTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKESLP 135 (219)
T ss_dssp SCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTTBS
T ss_pred cCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCcccCC
Confidence 667788999999988877 6654 4788899999999999999999999866553
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=33.26 E-value=2.3e+02 Score=27.75 Aligned_cols=138 Identities=12% Similarity=0.112 Sum_probs=68.2
Q ss_pred ccccccceEEEEEECCCCeEEEEEEeecccchhHHHHHHHHHHHHhcCCCCCcceeEeecc------------CCc----
Q 035691 449 IGTGSFGSVYKGILDPDQTVVAVKVLFLHQRGALKSFMAECEALRNIRHRNLVKIITACSS------------SDF---- 512 (640)
Q Consensus 449 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------------~~~---- 512 (640)
.-.| .+.||.+.. ++..|+||-. ..-..+.+..++...-.+.-|+. +++.+... ...
T Consensus 77 s~~G-stgvff~~t--d~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~-Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 77 SEKG-TEGLFFVET--ESGVFIVKRS---TNIESETFCSLLCMRLGLHAPKV-RVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp CCST-TSCEEEEEE--SSCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCE-EEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred ccCC-CCCeEEEEe--CCCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCe-eEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 3444 456666655 4778889954 12223445555555555566652 33332200 000
Q ss_pred --CCCceeeEEeeccCCCChhhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH--HHHHHHH-hcCCCCCeee-CCCCCCC
Q 035691 513 --QGNDFKALVYEFMHHGSLESWLHPESASDDLNYSPSILSFLQRLNIAINV--ASALEYL-HHHCKKQIVH-CDLKPSN 586 (640)
Q Consensus 513 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~i--~~al~yL-H~~~~~~ivH-rdlkp~N 586 (640)
.......++|||.+|..|.+.-...-. ..+. .+.+.++ +-+++++ +...+-+.+. ..=.+.|
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~~--------~~f~----~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~N 217 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSAP--------EVLT----KSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDN 217 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSHH--------HHSC----HHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGG
T ss_pred HHhhcccceehhhhcCCCccccchhhhhh--------hhcC----HHHHHhhchhheehhhhcCCccCcccccCCCChhh
Confidence 011235699999987655442111000 0011 1223333 2344444 4432222222 2257889
Q ss_pred eeeCCCC-cEEEcccccccc
Q 035691 587 VLLDNDM-IAHVGDFGLTRF 605 (640)
Q Consensus 587 iLl~~~~-~~kl~DfGla~~ 605 (640)
|++++++ .+.++|-+++..
T Consensus 218 IL~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 218 IMLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EEEESBTTCEEECSCCCCCC
T ss_pred eEEeCCCCeEEEEcCCcccc
Confidence 9997655 488999999854
Done!