Query 035694
Match_columns 336
No_of_seqs 96 out of 98
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 08:43:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035694.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035694hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a6qa1 d.306.1.1 (A:10-92) An 13.6 1.1E+02 0.008 21.5 4.5 38 181-218 35-73 (83)
2 d1cxzb_ a.2.6.1 (B:) Protein k 12.2 2.5E+02 0.018 20.3 6.3 41 10-51 8-48 (86)
3 d1pcfa_ d.18.1.1 (A:) Transcri 10.4 1.2E+02 0.0091 20.8 3.7 22 182-203 40-61 (66)
4 d2odka1 d.306.1.1 (A:1-51) Hyp 8.6 82 0.006 20.5 2.0 16 181-196 34-49 (51)
5 d2efka1 a.238.1.4 (A:10-288) C 8.4 4.2E+02 0.031 20.4 14.7 17 48-64 65-81 (279)
6 d1nkpa_ a.38.1.1 (A:) Myc prot 6.8 3.6E+02 0.027 18.3 5.7 29 17-45 45-73 (88)
7 d1qvra2 c.37.1.20 (A:149-535) 6.5 7.2E+02 0.052 21.4 11.1 48 48-95 256-304 (387)
8 d1nlwa_ a.38.1.1 (A:) Mad prot 6.0 3.9E+02 0.028 17.7 5.0 32 36-67 45-76 (79)
9 d1sknp_ a.37.1.1 (P:) Skn-1 {C 5.9 2.2E+02 0.016 20.2 3.2 16 182-197 21-36 (74)
10 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 5.0 4.3E+02 0.032 18.1 4.3 36 19-54 28-63 (67)
No 1
>d2a6qa1 d.306.1.1 (A:10-92) Antitoxin YefM {Escherichia coli [TaxId: 562]}
Probab=13.55 E-value=1.1e+02 Score=21.54 Aligned_cols=38 Identities=29% Similarity=0.272 Sum_probs=24.1
Q ss_pred CCceeecHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHH
Q 035694 181 AITVQMTQEEYHALKRRAEEEASLA-EWRVSVSMEQREG 218 (336)
Q Consensus 181 ~~~VTLS~eEY~~Ls~rA~EaEelA-~kRVaaA~aqVea 218 (336)
+..|-||.++|.+|-.-++---.-+ -.++..++.|++.
T Consensus 35 ~~~VliS~~d~~sl~ETl~lls~p~n~~~L~~s~~~~~~ 73 (83)
T d2a6qa1 35 EACVLMSLEEYNSLEETAYLLRSPANARRLMDSIDSLKS 73 (83)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHT
T ss_pred CCeEEeCHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc
Confidence 4679999999999876665332222 2445566666543
No 2
>d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.20 E-value=2.5e+02 Score=20.29 Aligned_cols=41 Identities=12% Similarity=0.131 Sum_probs=25.8
Q ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHhHHHhhhhhhHH
Q 035694 10 ENPGRNTSDLEAKTAELVKTKAELKRAKDNAMQSWLDSKPLI 51 (336)
Q Consensus 10 e~~~~~~~~l~s~~~ELeeaK~~Lekak~E~~~lr~aaesLr 51 (336)
++++.|... .+++..|+..+.-|...=.-...++..++-|+
T Consensus 8 gl~~~d~~~-~~~q~~le~~r~~lr~eI~KELKIKeGAENL~ 48 (86)
T d1cxzb_ 8 GLAGADLAA-PGVQQQLELERERLRREIRKELKLKEGAENLR 48 (86)
T ss_dssp TCTTSCTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCc-HHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHH
Confidence 345555444 44677788888877765555566666666555
No 3
>d1pcfa_ d.18.1.1 (A:) Transcriptional coactivator PC4 C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.38 E-value=1.2e+02 Score=20.80 Aligned_cols=22 Identities=14% Similarity=0.318 Sum_probs=18.9
Q ss_pred CceeecHHHHHHHHHHHHHHHH
Q 035694 182 ITVQMTQEEYHALKRRAEEEAS 203 (336)
Q Consensus 182 ~~VTLS~eEY~~Ls~rA~EaEe 203 (336)
.+|.||.+.|..|..-+.+.++
T Consensus 40 KGIsL~~~qw~~l~~~~~~i~~ 61 (66)
T d1pcfa_ 40 KGISLNPEQWSQLKEQISDIDD 61 (66)
T ss_dssp EEEEECHHHHHHHHHHHHHHHH
T ss_pred CeEEECHHHHHHHHHHHHHHHH
Confidence 5899999999999988877654
No 4
>d2odka1 d.306.1.1 (A:1-51) Hypothetical protein NE2111 {Nitrosomonas europaea [TaxId: 915]}
Probab=8.63 E-value=82 Score=20.48 Aligned_cols=16 Identities=19% Similarity=0.237 Sum_probs=13.6
Q ss_pred CCceeecHHHHHHHHH
Q 035694 181 AITVQMTQEEYHALKR 196 (336)
Q Consensus 181 ~~~VTLS~eEY~~Ls~ 196 (336)
+..|-||.++|+.|..
T Consensus 34 p~avlis~e~y~~L~~ 49 (51)
T d2odka1 34 EEAVLVPIGEWRRLQA 49 (51)
T ss_dssp EEEEEEEHHHHHHHHH
T ss_pred eeEEEeeHHHHHHHhc
Confidence 5678899999999975
No 5
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.43 E-value=4.2e+02 Score=20.36 Aligned_cols=17 Identities=6% Similarity=0.110 Sum_probs=7.2
Q ss_pred hhHHHHHHHHHHHHHhH
Q 035694 48 KPLIDELERLKATLASD 64 (336)
Q Consensus 48 esLr~ELekeK~eLa~l 64 (336)
..+..+++..-..+..+
T Consensus 65 ~~~~~~~~~~a~~~~~~ 81 (279)
T d2efka1 65 VQILQEVNDFAGQRELV 81 (279)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444444444444333
No 6
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.81 E-value=3.6e+02 Score=18.26 Aligned_cols=29 Identities=17% Similarity=0.038 Sum_probs=12.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhHHHhh
Q 035694 17 SDLEAKTAELVKTKAELKRAKDNAMQSWL 45 (336)
Q Consensus 17 ~~l~s~~~ELeeaK~~Lekak~E~~~lr~ 45 (336)
.+|..+..-+...+..+.....+...++.
T Consensus 45 ~iL~~A~~yI~~L~~~~~~l~~~~~~l~~ 73 (88)
T d1nkpa_ 45 VILKKATAYILSVQAEEQKLISEEDLLRK 73 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444443333333
No 7
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=6.51 E-value=7.2e+02 Score=21.40 Aligned_cols=48 Identities=19% Similarity=0.151 Sum_probs=21.5
Q ss_pred hhHHHHHHHHHHHHHhHHhhc-cchhhhhhhHHHHHHhhHHHHhhhHHH
Q 035694 48 KPLIDELERLKATLASDKNRC-SMSNMIVSELQAELDSTTKSIMSKKEE 95 (336)
Q Consensus 48 esLr~ELekeK~eLa~lKere-~~asa~V~sLe~eL~ktk~eLe~~~~~ 95 (336)
+.|..+|...+.+...|+... .........++.+|......+..+...
T Consensus 256 ~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~~ 304 (387)
T d1qvra2 256 DALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAE 304 (387)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 444445555555555553322 122333444555555555444444333
No 8
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.01 E-value=3.9e+02 Score=17.73 Aligned_cols=32 Identities=13% Similarity=0.098 Sum_probs=14.8
Q ss_pred HHHHhHHHhhhhhhHHHHHHHHHHHHHhHHhh
Q 035694 36 AKDNAMQSWLDSKPLIDELERLKATLASDKNR 67 (336)
Q Consensus 36 ak~E~~~lr~aaesLr~ELekeK~eLa~lKer 67 (336)
|.+-+..|..-...|..+++.++.+...|+.+
T Consensus 45 A~~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~ 76 (79)
T d1nlwa_ 45 AKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQ 76 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444455555555555555443
No 9
>d1sknp_ a.37.1.1 (P:) Skn-1 {Caenorhabditis elegans [TaxId: 6239]}
Probab=5.85 E-value=2.2e+02 Score=20.18 Aligned_cols=16 Identities=13% Similarity=0.208 Sum_probs=13.5
Q ss_pred CceeecHHHHHHHHHH
Q 035694 182 ITVQMTQEEYHALKRR 197 (336)
Q Consensus 182 ~~VTLS~eEY~~Ls~r 197 (336)
..|.||.+||..|-.+
T Consensus 21 ~Iv~lpv~eFne~l~~ 36 (74)
T d1sknp_ 21 QISEMSLSELQQVLKN 36 (74)
T ss_dssp HHHHSCHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHh
Confidence 5688999999988776
No 10
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.98 E-value=4.3e+02 Score=18.10 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHhhhhhhHHHHH
Q 035694 19 LEAKTAELVKTKAELKRAKDNAMQSWLDSKPLIDEL 54 (336)
Q Consensus 19 l~s~~~ELeeaK~~Lekak~E~~~lr~aaesLr~EL 54 (336)
+.-+..||+-+|.+|.+...+++.=+.-+--|.+=|
T Consensus 28 V~diE~eLerCk~~irrLeqel~~ErF~~iYLQt~L 63 (67)
T d1k1fa_ 28 VGDIEQELERAKASIRRLEQEVNQERFRMIYLQTLL 63 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455678888888888887766665544444444333
Done!