Your job contains 1 sequence.
>035695
STLVEETEQKLTLAAPAAATLPPSSSRAVRLPVRPGFGTRGRKCVVRANHFMVQLAKRDI
HHYDVSIDPEVTSQKINREIISQLINLYRLTNLGERIPAYDGMKSIYTAGPLPFESKEFI
ITLPDSDPRPSSSASPGTERQFRVVIRLASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVG
RSFFSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMLLIFILSKLD
FFFFSDLSRPLSDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNM
INKKMFNGGRVEVWTCMNFSTCLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQ
IEKALVDVHNKTTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRN
MQYFENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVA
VVASMDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNR
KPESIIFY
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035695
(548 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2057851 - symbol:AGO5 "ARGONAUTE 5" species:37... 1027 4.2e-158 2
UNIPROTKB|Q851R2 - symbol:MEL1 "Protein argonaute MEL1" s... 977 1.4e-150 2
UNIPROTKB|Q69VD5 - symbol:PHN1 "Protein argonaute PNH1" s... 944 1.0e-141 2
TAIR|locus:2170897 - symbol:AGO10 "ARGONAUTE 10" species:... 924 1.3e-137 2
UNIPROTKB|Q9HCK5 - symbol:EIF2C4 "Protein argonaute-4" sp... 416 2.2e-70 2
UNIPROTKB|F1SV64 - symbol:EIF2C4 "Uncharacterized protein... 416 2.2e-70 2
UNIPROTKB|F1P3Z1 - symbol:EIF2C4 "Protein argonaute-4" sp... 411 9.1e-70 2
MGI|MGI:1924100 - symbol:Ago4 "argonaute RISC catalytic s... 409 1.0e-69 2
UNIPROTKB|F1LUQ5 - symbol:Eif2c4 "Protein Eif2c4" species... 410 1.6e-69 2
UNIPROTKB|Q4KLV6 - symbol:eif2c4 "Protein argonaute-4" sp... 411 3.0e-69 2
ZFIN|ZDB-GENE-030131-5357 - symbol:ago4 "argonaute RISC c... 393 9.9e-68 2
UNIPROTKB|F1MXK6 - symbol:EIF2C4 "Uncharacterized protein... 376 4.8e-66 2
FB|FBgn0262739 - symbol:AGO1 "Argonaute-1" species:7227 "... 379 1.2e-65 2
UNIPROTKB|F1P3Z0 - symbol:EIF2C3 "Protein argonaute-3" sp... 386 1.4e-64 2
UNIPROTKB|F1MG44 - symbol:EIF2C3 "Protein argonaute-3" sp... 386 1.4e-64 2
UNIPROTKB|Q9H9G7 - symbol:EIF2C3 "Protein argonaute-3" sp... 386 1.4e-64 2
UNIPROTKB|Q9UKV8 - symbol:EIF2C2 "Protein argonaute-2" sp... 374 1.5e-64 2
UNIPROTKB|B0JYP5 - symbol:EIF2C2 "Protein argonaute-2" sp... 374 1.5e-64 2
MGI|MGI:2446632 - symbol:Ago2 "argonaute RISC catalytic s... 374 1.5e-64 2
RGD|621255 - symbol:Ago2 "argonaute RISC catalytic compon... 374 1.5e-64 2
UNIPROTKB|F1LUS2 - symbol:Eif2c3 "Protein Eif2c3" species... 386 1.7e-64 2
UNIPROTKB|Q6T5B7 - symbol:EIF2C3 "Protein argonaute-3" sp... 390 1.7e-64 2
MGI|MGI:2446634 - symbol:Ago3 "argonaute RISC catalytic s... 386 2.3e-64 2
UNIPROTKB|O77503 - symbol:EIF2C2 "Protein argonaute-2" sp... 369 2.3e-64 2
UNIPROTKB|Q6QME8 - symbol:EIF2C2 "Protein argonaute-2" sp... 371 3.3e-64 2
ZFIN|ZDB-GENE-060503-452 - symbol:ago3b "argonaute RISC c... 374 4.2e-64 2
UNIPROTKB|E2R0U1 - symbol:EIF2C3 "Uncharacterized protein... 381 4.9e-64 2
UNIPROTKB|Q6DCX2 - symbol:eif2c2 "Protein argonaute-2" sp... 373 1.1e-63 2
UNIPROTKB|Q5ZLG4 - symbol:EIF2C3 "Protein argonaute-3" sp... 377 2.2e-63 2
UNIPROTKB|F1NL39 - symbol:LOC100858102 "Uncharacterized p... 372 3.6e-63 2
UNIPROTKB|F1P3Y9 - symbol:EIF2C1 "Uncharacterized protein... 387 5.1e-63 2
UNIPROTKB|F1PGP5 - symbol:EIF2C1 "Uncharacterized protein... 387 6.6e-63 2
UNIPROTKB|Q9UL18 - symbol:EIF2C1 "Protein argonaute-1" sp... 387 6.6e-63 2
UNIPROTKB|F1SV63 - symbol:EIF2C1 "Uncharacterized protein... 387 6.6e-63 2
MGI|MGI:2446630 - symbol:Ago1 "argonaute RISC catalytic s... 387 6.6e-63 2
RGD|1304619 - symbol:Ago1 "argonaute RISC catalytic compo... 387 6.6e-63 2
UNIPROTKB|D4A2P5 - symbol:Eif2c4 "Protein Eif2c4" species... 331 6.9e-63 3
UNIPROTKB|F1MXX2 - symbol:EIF2C1 "Uncharacterized protein... 387 1.2e-62 2
UNIPROTKB|Q75HC2 - symbol:AGO7 "Protein argonaute 7" spec... 426 1.8e-59 3
TAIR|locus:2007111 - symbol:AGO7 "ARGONAUTE7" species:370... 386 4.5e-59 3
UNIPROTKB|Q6DJB9 - symbol:eif2c2 "Protein argonaute-2" sp... 355 4.5e-59 2
UNIPROTKB|F1PQZ7 - symbol:EIF2C2 "Uncharacterized protein... 374 9.1e-59 2
TAIR|locus:2179008 - symbol:AGO9 "ARGONAUTE 9" species:37... 409 1.2e-58 3
TAIR|locus:2059370 - symbol:AGO6 "ARGONAUTE 6" species:37... 396 1.4e-57 3
TAIR|locus:2059258 - symbol:AGO4 "ARGONAUTE 4" species:37... 408 1.4e-57 3
WB|WBGene00000105 - symbol:alg-1 species:6239 "Caenorhabd... 357 2.5e-57 3
RGD|1304583 - symbol:Ago4 "argonaute RISC catalytic compo... 331 7.1e-56 2
UNIPROTKB|F1PGN2 - symbol:EIF2C4 "Uncharacterized protein... 416 1.2e-55 2
UNIPROTKB|E1C5I5 - symbol:EIF2C4 "Protein argonaute-4" sp... 411 5.5e-55 2
UNIPROTKB|Q5ZMW0 - symbol:EIF2C4 "Protein argonaute-4" sp... 411 5.5e-55 2
WB|WBGene00000106 - symbol:alg-2 species:6239 "Caenorhabd... 346 1.5e-54 2
UNIPROTKB|F1RSJ1 - symbol:EIF2C2 "Uncharacterized protein... 374 2.5e-53 2
UNIPROTKB|Q5TA58 - symbol:EIF2C1 "Protein argonaute-1" sp... 387 3.5e-50 2
TAIR|locus:2147072 - symbol:AT5G21030 species:3702 "Arabi... 348 1.9e-46 3
UNIPROTKB|F1LZ24 - symbol:Eif2c3 "Protein Eif2c3" species... 308 3.2e-46 3
TAIR|locus:2197550 - symbol:AGO3 "ARGONAUTE 3" species:37... 320 1.2e-39 2
TAIR|locus:2197545 - symbol:AGO2 "argonaute 2" species:37... 334 2.4e-39 2
UNIPROTKB|I3L5V9 - symbol:EIF2C3 "Uncharacterized protein... 386 5.7e-38 2
POMBASE|SPCC736.11 - symbol:ago1 "argonaute" species:4896... 289 2.2e-33 2
UNIPROTKB|Q5TA56 - symbol:EIF2C3 "Protein argonaute-3" sp... 298 5.7e-26 1
FB|FBgn0087035 - symbol:AGO2 "Argonaute 2" species:7227 "... 232 6.9e-25 2
UNIPROTKB|G4N9J3 - symbol:MGG_14873 "Uncharacterized prot... 236 6.8e-24 3
ASPGD|ASPL0000044981 - symbol:rsdA species:162425 "Emeric... 246 7.1e-22 3
WB|WBGene00011910 - symbol:T22B3.2b species:6239 "Caenorh... 224 3.2e-19 3
WB|WBGene00006449 - symbol:tag-76 species:6239 "Caenorhab... 229 3.6e-19 3
ZFIN|ZDB-GENE-060526-345 - symbol:piwil2 "piwi-like 2 (Dr... 117 9.7e-06 3
UNIPROTKB|I3LE69 - symbol:PIWIL2 "Uncharacterized protein... 107 0.00014 3
UNIPROTKB|A6P7L8 - symbol:piwil2 "Piwi-like protein 2" sp... 99 0.00016 3
WB|WBGene00004323 - symbol:rde-1 species:6239 "Caenorhabd... 133 0.00044 2
UNIPROTKB|E1B838 - symbol:E1B838 "Uncharacterized protein... 83 0.00067 3
ZFIN|ZDB-GENE-030813-2 - symbol:piwil1 "piwi-like 1 (Dros... 120 0.0010 1
>TAIR|locus:2057851 [details] [associations]
symbol:AGO5 "ARGONAUTE 5" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0006417
GO:GO:0006355 GO:GO:0006351 EMBL:AC006929 GO:GO:0030529
GO:GO:0007143 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035197 IPI:IPI00516720 PIR:A84678
RefSeq:NP_850110.1 UniGene:At.50103 PDB:4G0O PDBsum:4G0O
ProteinModelPortal:Q9SJK3 SMR:Q9SJK3 PaxDb:Q9SJK3 PRIDE:Q9SJK3
EnsemblPlants:AT2G27880.1 GeneID:817334 KEGG:ath:AT2G27880
TAIR:At2g27880 InParanoid:Q9SJK3 OMA:AREGPVE PhylomeDB:Q9SJK3
Genevestigator:Q9SJK3 GermOnline:AT2G27880 GO:GO:0005731
GO:GO:0033169 GO:GO:0007140 GO:GO:0009561 GO:GO:0055046
Uniprot:Q9SJK3
Length = 997
Score = 1027 (366.6 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
Identities = 194/298 (65%), Positives = 235/298 (78%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRV 311
+D + +FG+ V L S++AR+LP PMLKYH SG+E VNP GQWNMI+KKM NG +V
Sbjct: 512 NDDLSKEFGMSVTTQLASIEARVLPPPMLKYHDSGKEKMVNPRLGQWNMIDKKMVNGAKV 571
Query: 312 EVWTCMNFSTCLNQDVIG-FCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHN 370
WTC++FST +++ + FC++L+ MC KGM F +P IP S P IE+AL+D+H
Sbjct: 572 TSWTCVSFSTRIDRGLPQEFCKQLIGMCVSKGMEFKPQPAIPFISCPPEHIEEALLDIHK 631
Query: 371 KTTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALK 430
+ PG LQLLI+ILPDV GSYG+IKR+CETELGIVSQCCQP+ + N QY ENVALK
Sbjct: 632 RA--PG--LQLLIVILPDVTGSYGKIKRICETELGIVSQCCQPRQVNKLNKQYMENVALK 687
Query: 431 INVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEV 490
INVK GGRNTVL+DA+++ IPL+TDRPTII GADVTHPQPGEDSSPSI AVVASMDWPE+
Sbjct: 688 INVKTGGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAVVASMDWPEI 747
Query: 491 TKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
KYRGLVSAQAH EEIIQDLYK +QDPQRGLVH G+IRE IAF+ +T + P+ IIFY
Sbjct: 748 NKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHFIAFRRATGQIPQRIIFY 805
Score = 535 (193.4 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
Identities = 120/249 (48%), Positives = 151/249 (60%)
Query: 27 RAVRLPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLIN 86
+AV PVRPG GT G+K +VRANHF+VQ+A RD++HYDVSI+PEV S+ +NR ++ L+
Sbjct: 143 KAVTFPVRPGRGTLGKKVMVRANHFLVQVADRDLYHYDVSINPEVISKTVNRNVMKLLVK 202
Query: 87 LYRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVI 146
Y+ ++LG + PAYDG KS+YTAGPLPF+SKEF++ L G +R F+V +
Sbjct: 203 NYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNLAEKRADGSS----GKDRPFKVAV 258
Query: 147 RLASQPYVYTLQKF------------IQVLDVVLRAAPSEKHTVVGRSFFSTDLGP---- 190
+ + +Y LQ+F IQVLDVVLR PS + VGRSFF T LG
Sbjct: 259 KNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPSNDYVSVGRSFFHTSLGKDARD 318
Query: 191 -MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXXR 249
G+LGDGIEYWRGYFQSLR TQ GLSLNI S Y + R
Sbjct: 319 GRGELGDGIEYWRGYFQSLRLTQMGLSLNIDVSARSFYEPIVVTDFISKFLNIRDLN--R 376
Query: 250 PLSDQVRLK 258
PL D RLK
Sbjct: 377 PLRDSDRLK 385
>UNIPROTKB|Q851R2 [details] [associations]
symbol:MEL1 "Protein argonaute MEL1" species:39947 "Oryza
sativa Japonica Group" [GO:0005730 "nucleolus" evidence=IMP]
[GO:0005731 "nucleolus organizer region" evidence=IMP] [GO:0005737
"cytoplasm" evidence=RCA] [GO:0007140 "male meiosis" evidence=IMP]
[GO:0007143 "female meiosis" evidence=IMP] [GO:0009561
"megagametogenesis" evidence=IMP] [GO:0033169 "histone H3-K9
demethylation" evidence=IDA] [GO:0035197 "siRNA binding"
evidence=ISS] [GO:0055046 "microgametogenesis" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:DP000009 EMBL:AP008209
GO:GO:0007143 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
KO:K11596 GO:GO:0035197 HSSP:Q9UL18 OMA:AREGPVE GO:GO:0005731
GO:GO:0033169 GO:GO:0007140 GO:GO:0009561 GO:GO:0055046
EMBL:AB297928 EMBL:AC104321 RefSeq:NP_001051583.2 UniGene:Os.80058
ProteinModelPortal:Q851R2 EnsemblPlants:LOC_Os03g58600.1
GeneID:4334449 KEGG:dosa:Os02t0616300-00 KEGG:dosa:Os03t0789466-00
KEGG:dosa:Os03t0800200-00 KEGG:osa:4334449 Gramene:Q851R2
ProtClustDB:CLSN2694409 Uniprot:Q851R2
Length = 1058
Score = 977 (349.0 bits), Expect = 1.4e-150, Sum P(2) = 1.4e-150
Identities = 193/302 (63%), Positives = 231/302 (76%)
Query: 253 DQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRVE 312
D+ +FGI+V + L SV AR+LP PMLKYH SGRE + P GQWNMINKKM NGG V+
Sbjct: 563 DRFAQEFGIKVCNDLVSVPARVLPPPMLKYHDSGREKTCAPSVGQWNMINKKMINGGTVD 622
Query: 313 VWTCMNFSTCLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
WTC++FS ++V FC L+ MCN GM FN RPV+ + S NP IE AL DVH +T
Sbjct: 623 NWTCLSFSRMRPEEVQRFCGDLIQMCNATGMSFNPRPVVDVRSTNPNNIENALRDVHRRT 682
Query: 373 TQ----PGKQ-LQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENV 427
++ GK LQLLI+ILP+V GSYG+IKRVCET+LGIVSQCC P+HAS N QY ENV
Sbjct: 683 SELLAREGKGGLQLLIVILPEVSGSYGKIKRVCETDLGIVSQCCLPRHASRPNKQYLENV 742
Query: 428 ALKINVKVGGRNTVLDDA-VQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMD 486
ALKINVKVGGRNTVL+ A ++ IP V++ PTIIFGADVTHP PGEDS+ SI AVVASMD
Sbjct: 743 ALKINVKVGGRNTVLERAFIRNGIPFVSEVPTIIFGADVTHPPPGEDSASSIAAVVASMD 802
Query: 487 WPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESII 546
WPE+TKYRGLVSAQ H +EII+DL+ +DP + +V+GGMIRELLIAF+ T R+PE II
Sbjct: 803 WPEITKYRGLVSAQPHRQEIIEDLFSVGKDPVK-VVNGGMIRELLIAFRKKTGRRPERII 861
Query: 547 FY 548
FY
Sbjct: 862 FY 863
Score = 514 (186.0 bits), Expect = 1.4e-150, Sum P(2) = 1.4e-150
Identities = 109/239 (45%), Positives = 148/239 (61%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPGFG G+K ++RANHF+V +A ++ HYDVSI+PE S+ NRE++++LI L+ T
Sbjct: 200 PARPGFGAAGKKVMIRANHFLVNVADNNLFHYDVSINPESKSRATNREVLNELIKLHGKT 259
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
+LG ++PAYDG KS+YTAG LPFES+EF++ L ER++++ IR+A +
Sbjct: 260 SLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKERA----EREYKITIRIAGR 315
Query: 152 PYVYTLQKF------------IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIE 199
+Y LQ+F IQVLDVVLR +PS + V RSFFST G G +G+G+E
Sbjct: 316 TDLYHLQQFLLGRQRDMPQETIQVLDVVLRESPSWNYVTVSRSFFSTQFGHRGDIGEGLE 375
Query: 200 YWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXXRPLSDQVRLK 258
WRGY+QSLRPTQ GLSLNI S + + RPLSD+ R+K
Sbjct: 376 CWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQFVEEFLNIRDTS--RPLSDRDRVK 432
>UNIPROTKB|Q69VD5 [details] [associations]
symbol:PHN1 "Protein argonaute PNH1" species:39947 "Oryza
sativa Japonica Group" [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0019827
"stem cell maintenance" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
EMBL:AP008212 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
GO:GO:0031047 GO:GO:0048366 GO:GO:0010586 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0003743 HSSP:Q9UL18
GO:GO:0019827 EMBL:AB081950 EMBL:AP004236 ProteinModelPortal:Q69VD5
KEGG:dosa:Os06t0597400-00 Gramene:Q69VD5 Uniprot:Q69VD5
Length = 979
Score = 944 (337.4 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 184/300 (61%), Positives = 221/300 (73%)
Query: 253 DQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRVE 312
D +FGI +++ LTSV+AR+LPAP LKYH +G+E P GQWNM+NKK+ NG +V
Sbjct: 489 DPYAKEFGINISEKLTSVEARVLPAPWLKYHDTGKEKECLPQVGQWNMVNKKVINGCKVN 548
Query: 313 VWTCMNFSTCLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNK 371
W C+NFS + + GFCQ L MC GM FN PVIPI S P Q+EKAL V+N
Sbjct: 549 HWACINFSRSVQETTARGFCQELAQMCQISGMEFNSEPVIPIYSARPDQVEKALKHVYNM 608
Query: 372 TTQP--GKQLQLLIIILPDVRGS-YGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVA 428
+ GK+L+LL+ ILPD GS YG IKR+CET+LG++SQCC KH + QY NV+
Sbjct: 609 SLNKLKGKELELLLAILPDNNGSLYGDIKRICETDLGLISQCCLTKHVFKISKQYLANVS 668
Query: 429 LKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWP 488
LKINVK+GGRNTVL DA+ RIPLV+D PTIIFGADVTHP+ GEDSSPSI AVVAS DWP
Sbjct: 669 LKINVKMGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWP 728
Query: 489 EVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
EVTKY GLV AQAH +E+IQDLYK+ DPQRG V GGMIRELLI+F+ +T +KP IIFY
Sbjct: 729 EVTKYAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQKPLRIIFY 788
Score = 463 (168.0 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 98/237 (41%), Positives = 144/237 (60%)
Query: 34 RPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLTNL 93
RPGFGT G +CVV+ANHF+ +L +D+ YDV I PEV+S+ +NR I+S+L+ LY ++L
Sbjct: 127 RPGFGTVGARCVVKANHFLAELPDKDLTQYDVKITPEVSSRSVNRAIMSELVRLYHDSDL 186
Query: 94 GERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQPY 153
G R+PAYDG K++YTAG LPF+++EF++ L ER++RV I+ A++
Sbjct: 187 GGRLPAYDGRKNLYTAGTLPFDAREFVVRLTDDDDGTGVPPR---EREYRVAIKFAARAD 243
Query: 154 VYTLQKFI------------QVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYW 201
++ L++FI QVLD+VLR + ++ +GRSF+S D+ +LGDG++ W
Sbjct: 244 LHHLRQFIAGRQADAPQEALQVLDIVLRELANRRYVSIGRSFYSPDIRKPQRLGDGLQSW 303
Query: 202 RGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXXRPLSDQVRLK 258
G++QS+RPTQ GLSLNI S + RPLSD R+K
Sbjct: 304 CGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQILGKDVIS--RPLSDANRIK 358
Score = 39 (18.8 bits), Expect = 3.1e-44, Sum P(2) = 3.1e-44
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 352 PISSYNPYQIEKALVDVHNKTTQPG 376
P+S N +I+KAL V + T G
Sbjct: 350 PLSDANRIKIKKALRGVKVEVTHRG 374
>TAIR|locus:2170897 [details] [associations]
symbol:AGO10 "ARGONAUTE 10" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;ISS] [GO:0035019 "somatic stem
cell maintenance" evidence=IMP] [GO:0010586 "miRNA metabolic
process" evidence=IMP] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010050
"vegetative phase change" evidence=RCA] [GO:0010051 "xylem and
phloem pattern formation" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
UniProt:Q9XGW1 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006417 GO:GO:0006355 GO:GO:0006351 GO:GO:0030529
SUPFAM:SSF53098 EMBL:AF154272 EMBL:AJ223508 EMBL:AB026651
IPI:IPI00539560 PIR:T52134 RefSeq:NP_001190464.1 RefSeq:NP_199194.1
UniGene:At.11438 ProteinModelPortal:Q9XGW1 SMR:Q9XGW1 STRING:Q9XGW1
PaxDb:Q9XGW1 PRIDE:Q9XGW1 EnsemblPlants:AT5G43810.1
EnsemblPlants:AT5G43810.2 GeneID:834403 KEGG:ath:AT5G43810
TAIR:At5g43810 eggNOG:NOG279895 HOGENOM:HOG000116043
InParanoid:Q9XGW1 KO:K11593 OMA:ENDILRT PhylomeDB:Q9XGW1
ProtClustDB:CLSN2686847 Genevestigator:Q9XGW1 GermOnline:AT5G43810
GO:GO:0035198 GO:GO:0031047 GO:GO:0048366 GO:GO:0010586
GO:GO:0035019 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
Length = 988
Score = 924 (330.3 bits), Expect = 1.3e-137, Sum P(2) = 1.3e-137
Identities = 184/302 (60%), Positives = 222/302 (73%)
Query: 253 DQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRVE 312
D +FG+ +++ L SV+ARILPAP LKYH++G+E P GQWNM+NKKM NG V
Sbjct: 494 DPYAKEFGMNISEKLASVEARILPAPWLKYHENGKEKDCLPQVGQWNMMNKKMINGMTVS 553
Query: 313 VWTCMNFSTCLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVH-- 369
W C+NFS + ++V GFC L MC GM FN PVIPI S P Q+EKAL V+
Sbjct: 554 RWACVNFSRSVQENVARGFCNELGQMCEVSGMEFNPEPVIPIYSARPDQVEKALKHVYHT 613
Query: 370 --NKTTQPGKQLQLLIIILPDVRGS-YGRIKRVCETELGIVSQCCQPKHASSRNMQYFEN 426
NKT GK+L+LL+ ILPD GS YG +KR+CETELG++SQCC KH + QY N
Sbjct: 614 SMNKTK--GKELELLLAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKISKQYLAN 671
Query: 427 VALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMD 486
V+LKINVK+GGRNTVL DA+ RIPLV+D PTIIFGADVTHP+ GE+SSPSI AVVAS D
Sbjct: 672 VSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVVASQD 731
Query: 487 WPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESII 546
WPEVTKY GLV AQAH +E+IQDLYK+ QDP RG V GGMIR+LLI+F+ +T +KP II
Sbjct: 732 WPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRII 791
Query: 547 FY 548
FY
Sbjct: 792 FY 793
Score = 444 (161.4 bits), Expect = 1.3e-137, Sum P(2) = 1.3e-137
Identities = 89/198 (44%), Positives = 129/198 (65%)
Query: 34 RPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLTNL 93
RPGFGT G KC+V+ANHF+ L +D++ YDV+I PEV+S+ +NR II++L+ LY+ ++L
Sbjct: 131 RPGFGTLGTKCIVKANHFLADLPTKDLNQYDVTITPEVSSKSVNRAIIAELVRLYKESDL 190
Query: 94 GERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQPY 153
G R+PAYDG KS+YTAG LPF KEF + + ER ++V I+ ++
Sbjct: 191 GRRLPAYDGRKSLYTAGELPFTWKEFSVKIVDEDDGIINGPKR--ERSYKVAIKFVARAN 248
Query: 154 VYTLQKF------------IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYW 201
++ L +F +Q+LD+VLR ++ VGRSFFS D+ +LG+G+E W
Sbjct: 249 MHHLGEFLAGKRADCPQEAVQILDIVLRELSVKRFCPVGRSFFSPDIKTPQRLGEGLESW 308
Query: 202 RGYFQSLRPTQFGLSLNI 219
G++QS+RPTQ GLSLNI
Sbjct: 309 CGFYQSIRPTQMGLSLNI 326
>UNIPROTKB|Q9HCK5 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IDA] [GO:0035278 "negative regulation
of translation involved in gene silencing by miRNA" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0010467
EMBL:CH471059 GO:GO:0007219 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 OMA:ENDILRT
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0035278 GO:GO:0006402 CTD:192670
EMBL:AB046787 EMBL:AL359186 EMBL:AL354864 EMBL:BC152450
IPI:IPI00030602 RefSeq:NP_060099.2 UniGene:Hs.471492
ProteinModelPortal:Q9HCK5 SMR:Q9HCK5 IntAct:Q9HCK5 STRING:Q9HCK5
PhosphoSite:Q9HCK5 DMDM:38372393 PaxDb:Q9HCK5 PRIDE:Q9HCK5
DNASU:192670 Ensembl:ENST00000373210 GeneID:192670 KEGG:hsa:192670
UCSC:uc001bzj.2 GeneCards:GC01P036273 HGNC:HGNC:18424 HPA:CAB012179
MIM:607356 neXtProt:NX_Q9HCK5 PharmGKB:PA38330 InParanoid:Q9HCK5
PhylomeDB:Q9HCK5 GenomeRNAi:192670 NextBio:89373
ArrayExpress:Q9HCK5 Bgee:Q9HCK5 CleanEx:HS_EIF2C4
Genevestigator:Q9HCK5 GermOnline:ENSG00000134698 Uniprot:Q9HCK5
Length = 861
Score = 416 (151.5 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 112/296 (37%), Positives = 157/296 (53%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 388 EFGIVVHNEMTELTGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 445
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 446 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKM 502
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN
Sbjct: 503 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKIN 560
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 561 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 616
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y V Q +EI Q+L S Q+ + L + M+RELLI F ST KP II+Y
Sbjct: 617 YCATVRVQTSRQEISQELLYS-QEVIQDLTN--MVRELLIQFYKSTRFKPTRIIYY 669
Score = 333 (122.3 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 77/233 (33%), Positives = 114/233 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYDV I PE +++NRE++ ++ +++
Sbjct: 16 PRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMQ 75
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P YDG +++YTA PLP + + + V ++L +
Sbjct: 76 IFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSVQWVSVVSLQLLLE 135
Query: 152 PYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
L + +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 136 ALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 195
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 196 VRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKF 248
>UNIPROTKB|F1SV64 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:CU929817
Ensembl:ENSSSCT00000004025 Uniprot:F1SV64
Length = 861
Score = 416 (151.5 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 112/296 (37%), Positives = 157/296 (53%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 388 EFGIVVHNEMTELTGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 445
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 446 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKM 502
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN
Sbjct: 503 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKIN 560
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 561 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 616
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y V Q +EI Q+L S Q+ + L + M+RELLI F ST KP II+Y
Sbjct: 617 YCATVRVQTSRQEISQELLYS-QEVIQDLTN--MVRELLIQFYKSTRFKPTRIIYY 669
Score = 333 (122.3 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 77/233 (33%), Positives = 114/233 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYDV I PE +++NRE++ ++ +++
Sbjct: 16 PRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKIQ 75
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P YDG +++YTA PLP + + + V ++L +
Sbjct: 76 IFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSVQWVSVVSLQLLLE 135
Query: 152 PYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
L + +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 136 ALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 195
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 196 VRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKF 248
>UNIPROTKB|F1P3Z1 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006402
"mRNA catabolic process" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 IPI:IPI00735148
EMBL:AADN02043839 EMBL:AADN02043840 EMBL:AADN02043841
Ensembl:ENSGALT00000003521 ArrayExpress:F1P3Z1 Uniprot:F1P3Z1
Length = 847
Score = 411 (149.7 bits), Expect = 9.1e-70, Sum P(2) = 9.1e-70
Identities = 111/296 (37%), Positives = 156/296 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 374 EFGIVVHNEMTELTGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 431
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 432 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKL 488
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN
Sbjct: 489 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKIN 546
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 547 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 602
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y V Q +E Q+L S Q+ + L + M+RELLI F ST KP II+Y
Sbjct: 603 YCATVRVQTSRQETSQELLYS-QEVIQDLTN--MVRELLIQFYKSTRFKPTRIIYY 655
Score = 332 (121.9 bits), Expect = 9.1e-70, Sum P(2) = 9.1e-70
Identities = 77/233 (33%), Positives = 114/233 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYDV I PE +++NRE++ ++ +++
Sbjct: 2 PRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMQ 61
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P YDG +++YTA PLP + + + V ++L +
Sbjct: 62 IFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSIQWVSVVSLQLLLE 121
Query: 152 PYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
L + +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 122 ALAGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 181
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 182 VRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKF 234
>MGI|MGI:1924100 [details] [associations]
symbol:Ago4 "argonaute RISC catalytic subunit 4"
species:10090 "Mus musculus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0031047
"gene silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:1924100
GO:GO:0003723 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 EMBL:AL606935 GeneTree:ENSGT00640000091310
GO:GO:0006402 CTD:192670 EMBL:AB081474 EMBL:AK030018 EMBL:BC096023
EMBL:AK129395 IPI:IPI00622422 IPI:IPI00762672 RefSeq:NP_694817.2
UniGene:Mm.86705 ProteinModelPortal:Q8CJF8 SMR:Q8CJF8 STRING:Q8CJF8
PhosphoSite:Q8CJF8 PaxDb:Q8CJF8 PRIDE:Q8CJF8
Ensembl:ENSMUST00000084289 GeneID:76850 KEGG:mmu:76850
UCSC:uc008utk.2 NextBio:345923 Bgee:Q8CJF8 Genevestigator:Q8CJF8
GermOnline:ENSMUSG00000042500 Uniprot:Q8CJF8
Length = 861
Score = 409 (149.0 bits), Expect = 1.0e-69, Sum P(2) = 1.0e-69
Identities = 111/296 (37%), Positives = 154/296 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P G W+M K+ + G ++VW
Sbjct: 388 EFGIVVHNEMTELTGRVLPAPMLQY--GGRNKTVATPSQGVWDMRGKQFYAGIEIKVWAV 445
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 446 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKM 502
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LK+N
Sbjct: 503 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKMN 560
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 561 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 616
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y V Q +EI Q+L S Q+ + L M RELLI F ST KP II+Y
Sbjct: 617 YCATVRVQTSRQEITQELLYS-QEVVQDLT--SMARELLIQFYKSTRFKPTRIIYY 669
Score = 334 (122.6 bits), Expect = 1.0e-69, Sum P(2) = 1.0e-69
Identities = 77/233 (33%), Positives = 114/233 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYDV I PE +++NRE++ ++ +++
Sbjct: 16 PRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMQ 75
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P YDG +++YTA PLP + + + V ++L +
Sbjct: 76 IFGDRQPGYDGKRNMYTAHPLPIGRDRIDMEVTLPGEGKDQTFKVSVQWVSVVSLQLLLE 135
Query: 152 PYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
L + +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 136 ALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 195
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 196 VRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKF 248
>UNIPROTKB|F1LUQ5 [details] [associations]
symbol:Eif2c4 "Protein Eif2c4" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1304583 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 IPI:IPI00359347
Ensembl:ENSRNOT00000035373 Uniprot:F1LUQ5
Length = 860
Score = 410 (149.4 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 112/296 (37%), Positives = 155/296 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 387 EFGIVVHNEMTELMGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 444
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 445 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKM 501
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN
Sbjct: 502 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKIN 559
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 560 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 615
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y V Q +EI Q+L S Q+ + L M RELLI F ST KP II+Y
Sbjct: 616 YCATVRVQTSRQEIAQELLFS-QEVVQDLT--SMARELLIQFYKSTRFKPTRIIYY 668
Score = 331 (121.6 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 77/233 (33%), Positives = 114/233 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYDV I PE +++NRE++ ++ +++
Sbjct: 15 PRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMQ 74
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P YDG +++YTA PLP + + + V ++L +
Sbjct: 75 IFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSVQWVSVVSLQLLLE 134
Query: 152 PYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
L + +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 135 ALAGHLSEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 194
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 195 VRPAMWKMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKF 247
>UNIPROTKB|Q4KLV6 [details] [associations]
symbol:eif2c4 "Protein argonaute-4" species:8355 "Xenopus
laevis" [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0003723 SUPFAM:SSF53098 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0035278
HSSP:Q9UL18 GO:GO:0006402 CTD:192670 EMBL:BC098982
RefSeq:NP_001089574.1 UniGene:Xl.79902 ProteinModelPortal:Q4KLV6
SMR:Q4KLV6 GeneID:734630 KEGG:xla:734630 Xenbase:XB-GENE-1006885
Uniprot:Q4KLV6
Length = 884
Score = 411 (149.7 bits), Expect = 3.0e-69, Sum P(2) = 3.0e-69
Identities = 111/296 (37%), Positives = 156/296 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 411 EFGIVVHNEMTELTGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 468
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 469 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKL 525
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN
Sbjct: 526 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKIN 583
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 584 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 639
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y V Q +E Q+L S Q+ + L + M+RELLI F ST KP II+Y
Sbjct: 640 YCATVRVQTSRQETTQELLYS-QEVIQDLCN--MVRELLIQFYKSTRFKPTRIIYY 692
Score = 328 (120.5 bits), Expect = 3.0e-69, Sum P(2) = 3.0e-69
Identities = 76/233 (32%), Positives = 114/233 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYDV I PE +++NRE++ ++ +++
Sbjct: 39 PRRPGLGTLGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMP 98
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXG--TERQFRVVIR 147
G+ P YDG +++YTA PLP + + +TL + ++++
Sbjct: 99 IFGDNQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEGKDQTFKVTIQWVSVVSLQLLLE 158
Query: 148 LASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
S +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 159 ALSGHLSEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 218
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 219 VRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDVQNINEQTKPLTDSQRVKF 271
>ZFIN|ZDB-GENE-030131-5357 [details] [associations]
symbol:ago4 "argonaute RISC catalytic component 4"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950
ZFIN:ZDB-GENE-030131-5357 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:CABZ01005377 EMBL:CABZ01005378
EMBL:CABZ01005379 IPI:IPI00996534 Ensembl:ENSDART00000129463
Bgee:E7F814 Uniprot:E7F814
Length = 874
Score = 393 (143.4 bits), Expect = 9.9e-68, Sum P(2) = 9.9e-68
Identities = 110/305 (36%), Positives = 158/305 (51%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYH-----KSGREASVN-----PDFGQWNMINKKMFN 307
+FGI V + +T V R+LPAPML+Y +GR+ S N P+ G W+M K+ +
Sbjct: 390 EFGIVVHNDMTEVTGRVLPAPMLQYGGRVSTDTGRDCSRNKTVATPNQGVWDMRGKQFYA 449
Query: 308 GGRVEVWTCMNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEK 363
G ++VW F+ C +D++ F +L + GM +P + +E
Sbjct: 450 GIEIKVWAVACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEP 508
Query: 364 ALVDVHNKTTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQY 423
H K + G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q
Sbjct: 509 MFK--HLKMSYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQT 564
Query: 424 FENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVA 483
N+ LKIN K+GG N VL V + P V +P I GADVTHP G+ PSI AVV
Sbjct: 565 LSNLCLKINAKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVG 621
Query: 484 SMDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPE 543
SMD ++Y V Q +++ Q+ S Q+ + L + M+RELLI F ST KP
Sbjct: 622 SMDG-HPSRYCATVRVQTSRQDLSQEQLFS-QEVIQDLTN--MVRELLIQFYKSTRFKPT 677
Query: 544 SIIFY 548
II+Y
Sbjct: 678 RIIYY 682
Score = 332 (121.9 bits), Expect = 9.9e-68, Sum P(2) = 9.9e-68
Identities = 76/233 (32%), Positives = 116/233 (49%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYD+ I PE +++NRE++ ++ +++
Sbjct: 18 PRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDIDIKPEKRPRRVNREVVDTMVRHFKMQ 77
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXG--TERQFRVVIR 147
G+R P YDG +++YTA PLP + + +TL + ++++
Sbjct: 78 IFGDRQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEGKDQTFKVSLQWVSVVSLQMLLE 137
Query: 148 LASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
S + +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 138 ALSGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 197
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 198 VRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNINEQTKPLTDSQRVKF 250
>UNIPROTKB|F1MXK6 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:DAAA02009205
IPI:IPI01001804 Ensembl:ENSBTAT00000020250 Uniprot:F1MXK6
Length = 850
Score = 376 (137.4 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 95/264 (35%), Positives = 139/264 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FG+ V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 387 EFGVVVHNDMTELTGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 444
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 445 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKM 501
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN
Sbjct: 502 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKIN 559
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 560 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 615
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQD 516
Y V Q +E+IQDL +++
Sbjct: 616 YCATVRVQTSRQEVIQDLTNMVRE 639
Score = 333 (122.3 bits), Expect = 4.8e-66, Sum P(2) = 4.8e-66
Identities = 77/233 (33%), Positives = 114/233 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYDV I PE +++NRE++ ++ +++
Sbjct: 15 PRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMQ 74
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P YDG +++YTA PLP + + + V ++L +
Sbjct: 75 IFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSVQWVSVVSLQLLLE 134
Query: 152 PYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
L + +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 135 ALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 194
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 195 VRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKF 247
Score = 164 (62.8 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
Identities = 43/98 (43%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +E+IQDL
Sbjct: 575 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSRYCATVRVQTSRQEVIQDL 633
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP II+Y
Sbjct: 634 TN-------------MVRELLIQFYKSTRFKPTRIIYY 658
>FB|FBgn0262739 [details] [associations]
symbol:AGO1 "Argonaute-1" species:7227 "Drosophila
melanogaster" [GO:0005850 "eukaryotic translation initiation factor
2 complex" evidence=ISS] [GO:0016442 "RNA-induced silencing
complex" evidence=ISS] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0030422 "production of siRNA involved
in RNA interference" evidence=IMP] [GO:0030423 "targeting of mRNA
for destruction involved in RNA interference" evidence=IMP]
[GO:0016246 "RNA interference" evidence=TAS] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IDA;IMP]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0035195 "gene silencing by miRNA" evidence=IMP;NAS] [GO:0007416
"synapse assembly" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=IMP] [GO:0007367 "segment polarity
determination" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006402 "mRNA catabolic process"
evidence=IGI;IMP] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0036099 "female germ-line stem cell maintenance" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 EMBL:AE013599
GO:GO:0005634 GO:GO:0048471 GO:GO:0007294 GO:GO:0007416
GO:GO:0030529 SUPFAM:SSF53098 GO:GO:0006342 KO:K11593 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OMA:NNLVKRA
ChiTaRS:EIF2C1 GO:GO:0035279 GeneTree:ENSGT00640000091312
GO:GO:0030422 GO:GO:0007367 GO:GO:0030423 GO:GO:0006402
GO:GO:0030727 GO:GO:0035196 GO:GO:0036099 FlyBase:FBgn0262739
EMBL:BT023945 EMBL:BT125895 RefSeq:NP_001246314.1
RefSeq:NP_725341.1 RefSeq:NP_725342.1 UniGene:Dm.7398 PDB:1R4K
PDBsum:1R4K SMR:Q32KD4 DIP:DIP-59685N IntAct:Q32KD4 STRING:Q32KD4
EnsemblMetazoa:FBtr0087612 EnsemblMetazoa:FBtr0087613
EnsemblMetazoa:FBtr0305592 GeneID:36544 KEGG:dme:Dmel_CG6671
UCSC:CG6671-RA CTD:36544 InParanoid:Q32KD4 EvolutionaryTrace:Q32KD4
GenomeRNAi:36544 NextBio:799120 Uniprot:Q32KD4
Length = 984
Score = 379 (138.5 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 93/282 (32%), Positives = 149/282 (52%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHK------SGRE--------ASVNPDFGQ 297
+D +FG+ +++ + V R+LP P L+Y +G++ + +P+ G
Sbjct: 499 NDSYVQEFGLTISNSMMEVRGRVLPPPKLQYGGRVSTGLTGQQLFPPQNKVSLASPNQGV 558
Query: 298 WNMINKKMFNGGRVEVWT--CMNFSTCLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPIS 354
W+M K+ F G + +W C + +D + F Q+L + N GM +P
Sbjct: 559 WDMRGKQFFTGVEIRIWAIACFAPQRTVREDALRNFTQQLQKISNDAGMPIIGQPCFCKY 618
Query: 355 SYNPYQIEKALVDVHNKTTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPK 414
+ P Q+E + K T PG LQL++++LP Y +KRV +T LG+ +QC Q K
Sbjct: 619 ATGPDQVEPMFR--YLKITFPG--LQLVVVVLPGKTPVYAEVKRVGDTVLGMATQCVQAK 674
Query: 415 HASSRNMQYFENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDS 474
+ + + Q N+ LKINVK+GG N++L +++ P V + P I GADVTHP G++
Sbjct: 675 NVNKTSPQTLSNLCLKINVKLGGINSILVPSIR---PKVFNEPVIFLGADVTHPPAGDNK 731
Query: 475 SPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQD 516
PSI AVV SMD ++Y V Q H +EIIQ+L +++
Sbjct: 732 KPSIAAVVGSMD-AHPSRYAATVRVQQHRQEIIQELSSMVRE 772
Score = 329 (120.9 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 86/243 (35%), Positives = 121/243 (49%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RP G GR V+RANHF V + + +HHYD++I P+ +K+NREII +++ Y
Sbjct: 136 PRRPNLGREGRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKI 195
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLA 149
G P +DG ++YT PLP E E +TL G +R FRV I+
Sbjct: 196 -FGVLKPVFDGRNNLYTRDPLPIGNERLELEVTLPGE----------GKDRIFRVTIKWQ 244
Query: 150 SQPYVYTLQKFIQ------------VLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDG 197
+Q ++ L++ ++ LDVV+R PS +T VGRSFFS+ G LG G
Sbjct: 245 AQVSLFNLEEALEGRTRQIPYDAILALDVVMRHLPSMTYTPVGRSFFSSPEGYYHPLGGG 304
Query: 198 IEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXXR-PLSDQVR 256
E W G+ QS+RP+Q+ + LNI S Y R PL+D R
Sbjct: 305 REVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIDFMCEVLDIRDINEQRKPLTDSQR 364
Query: 257 LKF 259
+KF
Sbjct: 365 VKF 367
Score = 166 (63.5 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 44/99 (44%), Positives = 52/99 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V + P I GADVTHP G++ PSI AVV SMD ++Y V Q H +EIIQ+L
Sbjct: 708 PKVFNEPVIFLGADVTHPPAGDNKKPSIAAVVGSMD-AHPSRYAATVRVQQHRQEIIQEL 766
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNR-KPESIIFY 548
M+RELLI F ST KP II Y
Sbjct: 767 -------------SSMVRELLIMFYKSTGGYKPHRIILY 792
>UNIPROTKB|F1P3Z0 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 IPI:IPI00594029 OMA:GRSMPEP EMBL:AADN02043844
Ensembl:ENSGALT00000003527 Uniprot:F1P3Z0
Length = 860
Score = 386 (140.9 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 97/263 (36%), Positives = 136/263 (51%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+F +V D + V R+LPAPML+Y GR +V P G W+M K+ G +++W
Sbjct: 397 EFQFKVRDEMAHVTGRVLPAPMLQY--GGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+T C + + GF +L + GM +P + +E H K T
Sbjct: 455 ACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 513 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + P V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 571 KLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EIIQDL +++
Sbjct: 627 CATVRVQRPRQEIIQDLASMVRE 649
Score = 309 (113.8 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 83/250 (33%), Positives = 119/250 (47%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 17 VPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 76
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V I+ S
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDVTLPGEGGKDRPFKVSIKFVS 129
Query: 151 Q---------------PYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ P L K I +DVVLR PS K+T VGRSFFS G
Sbjct: 130 RVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 189
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-R 249
LG G E W G+ QS+RP + + LNI S Y R
Sbjct: 190 DHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPR 249
Query: 250 PLSDQVRLKF 259
PL+D R+KF
Sbjct: 250 PLTDSHRVKF 259
Score = 169 (64.5 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 45/98 (45%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EIIQDL
Sbjct: 585 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------ASMVRELLIQFYKSTRFKPTRIIFY 668
>UNIPROTKB|F1MG44 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
IPI:IPI00697621 GO:GO:0006402 OMA:IKLEAEY EMBL:DAAA02009205
ProteinModelPortal:F1MG44 Ensembl:ENSBTAT00000024385 Uniprot:F1MG44
Length = 860
Score = 386 (140.9 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 97/263 (36%), Positives = 136/263 (51%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+F +V D + V R+LPAPML+Y GR +V P G W+M K+ G +++W
Sbjct: 397 EFQFKVRDEMAHVTGRVLPAPMLQY--GGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+T C + + GF +L + GM +P + +E H K T
Sbjct: 455 ACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 513 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + P V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 571 KLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EIIQDL +++
Sbjct: 627 CATVRVQRPRQEIIQDLASMVRE 649
Score = 309 (113.8 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 83/250 (33%), Positives = 119/250 (47%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 17 VPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 76
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V I+ S
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDVTLPGEGGKDRPFKVSIKFVS 129
Query: 151 Q---------------PYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ P L K I +DVVLR PS K+T VGRSFFS G
Sbjct: 130 RVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 189
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-R 249
LG G E W G+ QS+RP + + LNI S Y R
Sbjct: 190 DHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPR 249
Query: 250 PLSDQVRLKF 259
PL+D R+KF
Sbjct: 250 PLTDSHRVKF 259
Score = 169 (64.5 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 45/98 (45%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EIIQDL
Sbjct: 585 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------ASMVRELLIQFYKSTRFKPTRIIFY 668
>UNIPROTKB|Q9H9G7 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0010467 GO:GO:0007219 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0035278 CTD:192669 GO:GO:0006402
EMBL:AK022827 EMBL:AL138787 EMBL:BC025769 IPI:IPI00304181
IPI:IPI00551009 RefSeq:NP_079128.2 RefSeq:NP_803171.1
UniGene:Hs.657659 ProteinModelPortal:Q9H9G7 SMR:Q9H9G7
DIP:DIP-54486N IntAct:Q9H9G7 STRING:Q9H9G7 PhosphoSite:Q9H9G7
DMDM:76803660 PaxDb:Q9H9G7 PRIDE:Q9H9G7 DNASU:192669
Ensembl:ENST00000246314 Ensembl:ENST00000373191 GeneID:192669
KEGG:hsa:192669 UCSC:uc001bzp.3 GeneCards:GC01P036396
HGNC:HGNC:18421 HPA:HPA048342 MIM:607355 neXtProt:NX_Q9H9G7
PharmGKB:PA38329 InParanoid:Q9H9G7 OMA:IKLEAEY PhylomeDB:Q9H9G7
ChiTaRS:EIF2C3 GenomeRNAi:192669 NextBio:89367 ArrayExpress:Q9H9G7
Bgee:Q9H9G7 CleanEx:HS_EIF2C3 Genevestigator:Q9H9G7
GermOnline:ENSG00000126070 Uniprot:Q9H9G7
Length = 860
Score = 386 (140.9 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 97/263 (36%), Positives = 136/263 (51%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+F +V D + V R+LPAPML+Y GR +V P G W+M K+ G +++W
Sbjct: 397 EFQFKVRDEMAHVTGRVLPAPMLQY--GGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+T C + + GF +L + GM +P + +E H K T
Sbjct: 455 ACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 513 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + P V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 571 KLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EIIQDL +++
Sbjct: 627 CATVRVQRPRQEIIQDLASMVRE 649
Score = 309 (113.8 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 83/250 (33%), Positives = 119/250 (47%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 17 VPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 76
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V I+ S
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDVTLPGEGGKDRPFKVSIKFVS 129
Query: 151 Q---------------PYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ P L K I +DVVLR PS K+T VGRSFFS G
Sbjct: 130 RVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 189
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-R 249
LG G E W G+ QS+RP + + LNI S Y R
Sbjct: 190 DHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPR 249
Query: 250 PLSDQVRLKF 259
PL+D R+KF
Sbjct: 250 PLTDSHRVKF 259
Score = 169 (64.5 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 45/98 (45%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EIIQDL
Sbjct: 585 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------ASMVRELLIQFYKSTRFKPTRIIFY 668
>UNIPROTKB|Q9UKV8 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=NAS] [GO:0006412 "translation" evidence=NAS] [GO:0035279
"mRNA cleavage involved in gene silencing by miRNA"
evidence=IDA;IMP] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IDA;IMP] [GO:0005845
"mRNA cap binding complex" evidence=IDA] [GO:0045947 "negative
regulation of translational initiation" evidence=IDA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035197 "siRNA
binding" evidence=IDA] [GO:0031054 "pre-miRNA processing"
evidence=IDA] [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IDA] [GO:0000340 "RNA 7-methylguanosine
cap binding" evidence=IDA] [GO:0016442 "RNA-induced silencing
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005844 "polysome" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0004521 "endoribonuclease activity" evidence=EXP] [GO:0005829
"cytosol" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0006413 "translational initiation" evidence=NAS]
Reactome:REACT_71 InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0046872 GO:GO:0045947
GO:GO:0007219 GO:GO:0006351 GO:GO:0009791 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197 CTD:27161
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:AC067931 EMBL:AC107375
EMBL:BC007633 EMBL:BC018727 EMBL:BC125214 EMBL:AY077717
EMBL:BT007229 EMBL:AF121255 IPI:IPI00745433 IPI:IPI00929290
RefSeq:NP_001158095.1 RefSeq:NP_036286.2 UniGene:Hs.449415 PDB:3LUC
PDB:3LUD PDB:3LUG PDB:3LUH PDB:3LUJ PDB:3LUK PDB:3QX8 PDB:3QX9
PDB:4EI1 PDB:4EI3 PDB:4F3T PDBsum:3LUC PDBsum:3LUD PDBsum:3LUG
PDBsum:3LUH PDBsum:3LUJ PDBsum:3LUK PDBsum:3QX8 PDBsum:3QX9
PDBsum:4EI1 PDBsum:4EI3 PDBsum:4F3T ProteinModelPortal:Q9UKV8
SMR:Q9UKV8 DIP:DIP-29194N IntAct:Q9UKV8 MINT:MINT-1957975
STRING:Q9UKV8 PhosphoSite:Q9UKV8 DMDM:229463006 PaxDb:Q9UKV8
PRIDE:Q9UKV8 DNASU:27161 Ensembl:ENST00000220592
Ensembl:ENST00000519980 GeneID:27161 KEGG:hsa:27161 UCSC:uc003yvn.3
UCSC:uc010meo.3 GeneCards:GC08M141541 HGNC:HGNC:3263 HPA:CAB019309
MIM:606229 neXtProt:NX_Q9UKV8 PharmGKB:PA27694 InParanoid:Q9UKV8
OMA:AIKWMSC PhylomeDB:Q9UKV8 ChiTaRS:EIF2C2
EvolutionaryTrace:Q9UKV8 GenomeRNAi:27161 NextBio:49946
ArrayExpress:Q9UKV8 Bgee:Q9UKV8 CleanEx:HS_EIF2C2
Genevestigator:Q9UKV8 GermOnline:ENSG00000123908 GO:GO:0003743
Uniprot:Q9UKV8
Length = 859
Score = 374 (136.7 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 396 EFGIMVKDEMTDVTGRVLQPPSILY--GGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAI 453
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P + +E H K T
Sbjct: 454 ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 511
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 512 YAG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINV 569
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 570 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 625
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 626 CATVRVQQHRQEIIQDLAAMVRE 648
Score = 321 (118.1 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 84/247 (34%), Positives = 123/247 (49%)
Query: 28 AVRLPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINL 87
A + P RP FGT GR ++AN F + + K DI+HY++ I PE +++NREI+ ++
Sbjct: 22 AFKPPPRPDFGTSGRTIKLQANFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQH 81
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVV 145
++ G+R P +DG K++YTA PLP + E +TL G +R F+V
Sbjct: 82 FKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGE----------GKDRIFKVS 131
Query: 146 IRLASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQ 193
I+ S + L + IQ LDVV+R PS ++T VGRSFF+ G
Sbjct: 132 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNP 191
Query: 194 LGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLS 252
LG G E W G+ QS+RP+ + + LNI S Y +PL+
Sbjct: 192 LGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLT 251
Query: 253 DQVRLKF 259
D R+KF
Sbjct: 252 DSQRVKF 258
Score = 177 (67.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 584 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 642
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 643 -------------AAMVRELLIQFYKSTRFKPTRIIFY 667
>UNIPROTKB|B0JYP5 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9913 "Bos
taurus" [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IEA] [GO:0045947 "negative regulation
of translational initiation" evidence=IEA] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IEA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IEA] [GO:0035197 "siRNA binding"
evidence=IEA] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0005845
"mRNA cap binding complex" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0045947 GO:GO:0009791
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 GO:GO:0035197
IPI:IPI00704677 UniGene:Bt.21912 GO:GO:0005845 GO:GO:0016442
GO:GO:0070551 GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 OMA:AIKWMSC
GO:GO:0003743 EMBL:DAAA02037528 EMBL:DAAA02037529 EMBL:DAAA02037530
EMBL:BC151491 SMR:B0JYP5 STRING:B0JYP5 Ensembl:ENSBTAT00000002068
InParanoid:B0JYP5 Uniprot:B0JYP5
Length = 860
Score = 374 (136.7 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 397 EFGIMVKDEMTDVTGRVLQPPSILY--GGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P + +E H K T
Sbjct: 455 ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 513 YAG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 571 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 627 CATVRVQQHRQEIIQDLAAMVRE 649
Score = 321 (118.1 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 84/247 (34%), Positives = 123/247 (49%)
Query: 28 AVRLPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINL 87
A + P RP FGT GR ++AN F + + K DI+HY++ I PE +++NREI+ ++
Sbjct: 23 AFKPPPRPDFGTSGRTIKLQANFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQH 82
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVV 145
++ G+R P +DG K++YTA PLP + E +TL G +R F+V
Sbjct: 83 FKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGE----------GKDRIFKVS 132
Query: 146 IRLASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQ 193
I+ S + L + IQ LDVV+R PS ++T VGRSFF+ G
Sbjct: 133 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNP 192
Query: 194 LGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLS 252
LG G E W G+ QS+RP+ + + LNI S Y +PL+
Sbjct: 193 LGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLT 252
Query: 253 DQVRLKF 259
D R+KF
Sbjct: 253 DSQRVKF 259
Score = 177 (67.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 585 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------AAMVRELLIQFYKSTRFKPTRIIFY 668
>MGI|MGI:2446632 [details] [associations]
symbol:Ago2 "argonaute RISC catalytic subunit 2"
species:10090 "Mus musculus" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISO;IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003729
"mRNA binding" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005844 "polysome"
evidence=ISO] [GO:0005845 "mRNA cap binding complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006379 "mRNA cleavage" evidence=IMP] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016442 "RNA-induced
silencing complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0031047
"gene silencing by RNA" evidence=IEA] [GO:0031054 "pre-miRNA
processing" evidence=ISO] [GO:0035068 "micro-ribonucleoprotein
complex" evidence=ISO;IDA] [GO:0035197 "siRNA binding"
evidence=ISO] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISO] [GO:0035279
"mRNA cleavage involved in gene silencing by miRNA" evidence=ISO]
[GO:0045947 "negative regulation of translational initiation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070551 "endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446632
GO:GO:0005634 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0045947 GO:GO:0003729 GO:GO:0006351 GO:GO:0009791
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 GO:GO:0035197
CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 OMA:AIKWMSC EMBL:AB081472 EMBL:BC096465
EMBL:BC128379 EMBL:BC129922 EMBL:AK220193 IPI:IPI00229988
RefSeq:NP_694818.3 UniGene:Mm.23095 UniGene:Mm.391971
UniGene:Mm.440409 UniGene:Mm.476931 UniGene:Mm.486474
UniGene:Mm.490340 ProteinModelPortal:Q8CJG0 SMR:Q8CJG0
DIP:DIP-35014N IntAct:Q8CJG0 STRING:Q8CJG0 PhosphoSite:Q8CJG0
PaxDb:Q8CJG0 PRIDE:Q8CJG0 Ensembl:ENSMUST00000044113 GeneID:239528
KEGG:mmu:239528 InParanoid:A1A563 NextBio:384151 Bgee:Q8CJG0
CleanEx:MM_EIF2C2 Genevestigator:Q8CJG0
GermOnline:ENSMUSG00000036698 Uniprot:Q8CJG0
Length = 860
Score = 374 (136.7 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 397 EFGIMVKDEMTDVTGRVLQPPSILY--GGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P + +E H K T
Sbjct: 455 ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 513 YAG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 571 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 627 CATVRVQQHRQEIIQDLAAMVRE 649
Score = 321 (118.1 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 84/247 (34%), Positives = 123/247 (49%)
Query: 28 AVRLPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINL 87
A + P RP FGT GR ++AN F + + K DI+HY++ I PE +++NREI+ ++
Sbjct: 23 AFKPPPRPDFGTTGRTIKLQANFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQH 82
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVV 145
++ G+R P +DG K++YTA PLP + E +TL G +R F+V
Sbjct: 83 FKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGE----------GKDRIFKVS 132
Query: 146 IRLASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQ 193
I+ S + L + IQ LDVV+R PS ++T VGRSFF+ G
Sbjct: 133 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNP 192
Query: 194 LGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLS 252
LG G E W G+ QS+RP+ + + LNI S Y +PL+
Sbjct: 193 LGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLT 252
Query: 253 DQVRLKF 259
D R+KF
Sbjct: 253 DSQRVKF 259
Score = 177 (67.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 585 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------AAMVRELLIQFYKSTRFKPTRIIFY 668
>RGD|621255 [details] [associations]
symbol:Ago2 "argonaute RISC catalytic component 2" species:10116
"Rattus norvegicus" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=IEA;ISO;ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=ISO] [GO:0003729
"mRNA binding" evidence=IEA;ISO] [GO:0004521 "endoribonuclease
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005844 "polysome"
evidence=IEA;ISO;ISS] [GO:0005845 "mRNA cap binding complex"
evidence=IEA;ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009791 "post-embryonic development" evidence=IEA;ISO]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=NAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0031054
"pre-miRNA processing" evidence=IEA;ISO;ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA;ISO;ISS] [GO:0035197
"siRNA binding" evidence=IEA;ISO;ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=IEA;ISO;ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA;ISO;ISS] [GO:0045947 "negative
regulation of translational initiation" evidence=IEA;ISO;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=IEA;ISO;ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:621255
GO:GO:0005634 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0045947 GO:GO:0006351 GO:GO:0009791 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197 CTD:27161
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:AF195534 IPI:IPI00214529
RefSeq:NP_067608.1 UniGene:Rn.35512 ProteinModelPortal:Q9QZ81
SMR:Q9QZ81 STRING:Q9QZ81 GeneID:59117 KEGG:rno:59117
UCSC:RGD:621255 InParanoid:Q9QZ81 NextBio:611775
ArrayExpress:Q9QZ81 Genevestigator:Q9QZ81
GermOnline:ENSRNOG00000008533 Uniprot:Q9QZ81
Length = 860
Score = 374 (136.7 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 397 EFGIMVKDEMTDVTGRVLQPPSILY--GGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P + +E H K T
Sbjct: 455 ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 513 YAG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 571 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 627 CATVRVQQHRQEIIQDLAAMVRE 649
Score = 321 (118.1 bits), Expect = 1.5e-64, Sum P(2) = 1.5e-64
Identities = 84/247 (34%), Positives = 123/247 (49%)
Query: 28 AVRLPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINL 87
A + P RP FGT GR ++AN F + + K DI+HY++ I PE +++NREI+ ++
Sbjct: 23 AFKPPPRPDFGTTGRTIKLQANFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQH 82
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVV 145
++ G+R P +DG K++YTA PLP + E +TL G +R F+V
Sbjct: 83 FKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGE----------GKDRIFKVS 132
Query: 146 IRLASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQ 193
I+ S + L + IQ LDVV+R PS ++T VGRSFF+ G
Sbjct: 133 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNP 192
Query: 194 LGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLS 252
LG G E W G+ QS+RP+ + + LNI S Y +PL+
Sbjct: 193 LGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLT 252
Query: 253 DQVRLKF 259
D R+KF
Sbjct: 253 DSQRVKF 259
Score = 177 (67.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 585 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------AAMVRELLIQFYKSTRFKPTRIIFY 668
>UNIPROTKB|F1LUS2 [details] [associations]
symbol:Eif2c3 "Protein Eif2c3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1309163 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 OMA:IKLEAEY IPI:IPI00359343
Ensembl:ENSRNOT00000042371 ArrayExpress:F1LUS2 Uniprot:F1LUS2
Length = 854
Score = 386 (140.9 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 97/263 (36%), Positives = 136/263 (51%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+F +V D + V R+LPAPML+Y GR +V P G W+M K+ G +++W
Sbjct: 391 EFQFKVRDEMAHVTGRVLPAPMLQY--GGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAI 448
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+T C + + GF +L + GM +P + +E H K T
Sbjct: 449 ACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 506
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 507 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINV 564
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + P V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 565 KLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRY 620
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EIIQDL +++
Sbjct: 621 CATVRVQRPRQEIIQDLASMVRE 643
Score = 308 (113.5 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 82/250 (32%), Positives = 119/250 (47%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 11 VPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 70
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V ++ S
Sbjct: 71 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDVTLPGEGGKDRPFKVSVKFVS 123
Query: 151 Q---------------PYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ P L K I +DVVLR PS K+T VGRSFFS G
Sbjct: 124 RVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 183
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-R 249
LG G E W G+ QS+RP + + LNI S Y R
Sbjct: 184 DHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPR 243
Query: 250 PLSDQVRLKF 259
PL+D R+KF
Sbjct: 244 PLTDSHRVKF 253
Score = 169 (64.5 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 45/98 (45%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EIIQDL
Sbjct: 579 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDL 637
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 638 -------------ASMVRELLIQFYKSTRFKPTRIIFY 662
>UNIPROTKB|Q6T5B7 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=ISS] [GO:0006402 "mRNA catabolic
process" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035278 HSSP:Q9UL18 EMBL:AY436348 IPI:IPI00697621
RefSeq:NP_001001133.1 UniGene:Bt.47704 STRING:Q6T5B7 GeneID:406231
KEGG:bta:406231 CTD:192669 InParanoid:Q6T5B7 NextBio:20817875
GO:GO:0006402 Uniprot:Q6T5B7
Length = 861
Score = 390 (142.3 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 98/263 (37%), Positives = 136/263 (51%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+F +V D + V R+LPAPML+Y GR +V P G W+M K+ G +E+W
Sbjct: 397 EFQFKVRDEMAHVTGRVLPAPMLQY--GGRNRTVATPSHGVWDMRGKQFHTGVEIEMWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+T C + + GF +L + GM +P + +E H K T
Sbjct: 455 ACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 513 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + P V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 571 KLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EIIQDL +++
Sbjct: 627 CATVRVQRPRQEIIQDLASMVRE 649
Score = 304 (112.1 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 82/249 (32%), Positives = 118/249 (47%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 17 VPRRPGYGTMGKPTKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 76
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V I+ S
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDATLPGEGGKDRPFKVSIKFVS 129
Query: 151 Q---------------PYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ P L K I +DVVLR PS K+T VGRSFFS G
Sbjct: 130 RVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 189
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-R 249
LG G E W G+ QS+RP + + LNI S Y R
Sbjct: 190 DHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPR 249
Query: 250 PLSDQVRLK 258
PL+D R+K
Sbjct: 250 PLTDSHRVK 258
Score = 169 (64.5 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 45/98 (45%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EIIQDL
Sbjct: 585 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------ASMVRELLIQFYKSTRFKPTRIIFY 668
>MGI|MGI:2446634 [details] [associations]
symbol:Ago3 "argonaute RISC catalytic subunit 3"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446634
EMBL:CH466552 GO:GO:0003723 SUPFAM:SSF53098 eggNOG:NOG279895
HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 EMBL:AL606976 GeneTree:ENSGT00640000091310
HOVERGEN:HBG006101 CTD:192669 GO:GO:0006402 EMBL:AB081473
EMBL:AK154436 EMBL:AK171118 EMBL:BC137964 IPI:IPI00229987
RefSeq:NP_700451.2 UniGene:Mm.440915 UniGene:Mm.482388
UniGene:Mm.483093 ProteinModelPortal:Q8CJF9 SMR:Q8CJF9
STRING:Q8CJF9 PhosphoSite:Q8CJF9 PaxDb:Q8CJF9 PRIDE:Q8CJF9
Ensembl:ENSMUST00000069097 GeneID:214150 KEGG:mmu:214150
InParanoid:Q3TBP7 OMA:GRSMPEP NextBio:374206 Bgee:Q8CJF9
CleanEx:MM_EIF2C3 Genevestigator:Q8CJF9
GermOnline:ENSMUSG00000028842 Uniprot:Q8CJF9
Length = 860
Score = 386 (140.9 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 97/263 (36%), Positives = 136/263 (51%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+F +V D + V R+LPAPML+Y GR +V P G W+M K+ G +++W
Sbjct: 397 EFQFKVRDEMAHVTGRVLPAPMLQY--GGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+T C + + GF +L + GM +P + +E H K T
Sbjct: 455 ACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 513 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + P V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 571 KLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EIIQDL +++
Sbjct: 627 CATVRVQRPRQEIIQDLASMVRE 649
Score = 307 (113.1 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 81/250 (32%), Positives = 119/250 (47%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 17 VPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 76
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V ++ S
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDVTLPGEGGKDRPFKVSVKFVS 129
Query: 151 Q---------------PYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ P L K + +DVVLR PS K+T VGRSFFS G
Sbjct: 130 RVSWHLLHEALAGGTLPEPLELDKPVSTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 189
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-R 249
LG G E W G+ QS+RP + + LNI S Y R
Sbjct: 190 DHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPR 249
Query: 250 PLSDQVRLKF 259
PL+D R+KF
Sbjct: 250 PLTDSHRVKF 259
Score = 169 (64.5 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 45/98 (45%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EIIQDL
Sbjct: 585 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------ASMVRELLIQFYKSTRFKPTRIIFY 668
>UNIPROTKB|O77503 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9986
"Oryctolagus cuniculus" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISS] [GO:0005844 "polysome" evidence=ISS]
[GO:0005845 "mRNA cap binding complex" evidence=ISS] [GO:0016442
"RNA-induced silencing complex" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0031054 "pre-miRNA
processing" evidence=ISS] [GO:0035068 "micro-ribonucleoprotein
complex" evidence=ISS] [GO:0035197 "siRNA binding" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0045947
"negative regulation of translational initiation" evidence=ISS]
[GO:0070551 "endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0045947 GO:GO:0006351
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0005844 GO:GO:0035278
GO:GO:0035197 CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 EMBL:AF005355 PIR:PC6505
RefSeq:NP_001076179.1 UniGene:Ocu.1816 ProteinModelPortal:O77503
SMR:O77503 STRING:O77503 GeneID:100009457 Uniprot:O77503
Length = 840
Score = 369 (135.0 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 96/263 (36%), Positives = 131/263 (49%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 377 EFGIMVKDEMTDVTGRVLQPPSILY--GGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAI 434
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P Y + H K T
Sbjct: 435 ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCF--CKYAQGADSVGPMFRHLKNT 492
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 493 YAG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINV 550
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 551 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 606
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 607 CATVRVQQHRQEIIQDLAAMVRE 629
Score = 324 (119.1 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 85/247 (34%), Positives = 123/247 (49%)
Query: 28 AVRLPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINL 87
A + P RP FGT GR ++AN F + + K DI+HY++ I PE +++NREI+ ++
Sbjct: 3 AFKPPPRPDFGTSGRTIKLQANFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQH 62
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVV 145
++ G+R P +DG K++YTA PLP E E +TL G +R F+V
Sbjct: 63 FKAQIFGDRKPVFDGRKNLYTAMPLPIGREKVELEVTLPGE----------GKDRIFKVS 112
Query: 146 IRLASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQ 193
I+ S + L + IQ LDVV+R PS ++T VGRSFF+ G
Sbjct: 113 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNP 172
Query: 194 LGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLS 252
LG G E W G+ QS+RP+ + + LNI S Y +PL+
Sbjct: 173 LGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLT 232
Query: 253 DQVRLKF 259
D R+KF
Sbjct: 233 DSQRVKF 239
Score = 177 (67.4 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 565 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 623
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 624 -------------AAMVRELLIQFYKSTRFKPTRIIFY 648
>UNIPROTKB|Q6QME8 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9913 "Bos
taurus" [GO:0045947 "negative regulation of translational
initiation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005844 "polysome" evidence=ISS] [GO:0035197
"siRNA binding" evidence=ISS] [GO:0070551 "endoribonuclease
activity, cleaving siRNA-paired mRNA" evidence=ISS] [GO:0031054
"pre-miRNA processing" evidence=ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISS] [GO:0005845 "mRNA
cap binding complex" evidence=ISS] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=ISS] [GO:0016442
"RNA-induced silencing complex" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0045947 GO:GO:0006351 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197
EMBL:AY533678 IPI:IPI00704677 RefSeq:NP_991363.1 UniGene:Bt.21912
ProteinModelPortal:Q6QME8 SMR:Q6QME8 STRING:Q6QME8 PRIDE:Q6QME8
GeneID:404130 KEGG:bta:404130 CTD:27161 InParanoid:Q6QME8
NextBio:20817567 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 Uniprot:Q6QME8
Length = 860
Score = 371 (135.7 bits), Expect = 3.3e-64, Sum P(2) = 3.3e-64
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 397 EFGIMVKDEMTDVTGRVLQPPSILY--GGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P + +E H K T
Sbjct: 455 ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 513 YAG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLWLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 571 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 627 CATVRVQQHRQEIIQDLAAMVRE 649
Score = 321 (118.1 bits), Expect = 3.3e-64, Sum P(2) = 3.3e-64
Identities = 84/247 (34%), Positives = 123/247 (49%)
Query: 28 AVRLPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINL 87
A + P RP FGT GR ++AN F + + K DI+HY++ I PE +++NREI+ ++
Sbjct: 23 AFKPPPRPDFGTSGRTIKLQANFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQH 82
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVV 145
++ G+R P +DG K++YTA PLP + E +TL G +R F+V
Sbjct: 83 FKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGE----------GKDRIFKVS 132
Query: 146 IRLASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQ 193
I+ S + L + IQ LDVV+R PS ++T VGRSFF+ G
Sbjct: 133 IKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNP 192
Query: 194 LGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLS 252
LG G E W G+ QS+RP+ + + LNI S Y +PL+
Sbjct: 193 LGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLT 252
Query: 253 DQVRLKF 259
D R+KF
Sbjct: 253 DSQRVKF 259
Score = 177 (67.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 585 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------AAMVRELLIQFYKSTRFKPTRIIFY 668
>ZFIN|ZDB-GENE-060503-452 [details] [associations]
symbol:ago3b "argonaute RISC catalytic component
3b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:JX448394
Uniprot:K4IKE9
Length = 867
Score = 374 (136.7 bits), Expect = 4.2e-64, Sum P(2) = 4.2e-64
Identities = 99/276 (35%), Positives = 140/276 (50%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREAS---VN-----PDFGQWNMINK 303
SD +F +V D + V R+LPAPML+Y GR +S +N P G W+M K
Sbjct: 391 SDPFVQEFQFRVRDEMAEVTGRVLPAPMLQY--GGRVSSEHFMNRTVATPSHGVWDMRGK 448
Query: 304 KMFNGGRVEVWTCMNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQ 360
+ G +++W F+T C + + GF +L + GM +P +
Sbjct: 449 QFHTGVEIKMWAIACFATQRQCREEVLKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADN 508
Query: 361 IEKALVDVHNKTTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRN 420
+E H K T G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ +
Sbjct: 509 VEPMFR--HLKNTYAG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTS 564
Query: 421 MQYFENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVA 480
Q N+ LKINVK+GG N +L V + P V +P I GADVTHP G+ PSI A
Sbjct: 565 PQTLSNLCLKINVKLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAA 621
Query: 481 VVASMDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQD 516
VV SMD ++Y V Q +E+IQDL +++
Sbjct: 622 VVGSMD-AHPSRYCATVRVQRPRQEVIQDLASMVRE 656
Score = 317 (116.6 bits), Expect = 4.2e-64, Sum P(2) = 4.2e-64
Identities = 84/243 (34%), Positives = 117/243 (48%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V + K D++ YDV I PE +++NRE++ ++ +++
Sbjct: 17 VPRRPGYGTMGKPIKLLANCFQVDIPKMDVYLYDVDIKPEKCPRRVNREVVDSMVQHFKV 76
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESK--EFIITL------XXXXXXXXXXXXXGTERQF 142
T G+R P YDG KS+YTA PLP S + +TL +
Sbjct: 77 TIFGDRRPVYDGKKSLYTAQPLPVASAGVDLDVTLPGEGGKDRIFKVTIKFVSLVSWHML 136
Query: 143 RVVIRLASQPYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDG 197
V+ S P L K I +DVVLR PS ++T VGRSFFS+ G LG G
Sbjct: 137 HEVLTGRSTPDPLELDKPISTNPVHAVDVVLRHLPSMRYTPVGRSFFSSPEGYDHPLGGG 196
Query: 198 IEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-RPLSDQVR 256
E W G+ QS+RP + + LNI S Y RPL+D R
Sbjct: 197 REVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHR 256
Query: 257 LKF 259
+KF
Sbjct: 257 VKF 259
Score = 170 (64.9 bits), Expect = 8.4e-39, Sum P(2) = 8.4e-39
Identities = 44/98 (44%), Positives = 52/98 (53%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +E+IQDL
Sbjct: 592 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEVIQDL 650
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST+ KP IIFY
Sbjct: 651 -------------ASMVRELLIQFYKSTHYKPTRIIFY 675
>UNIPROTKB|E2R0U1 [details] [associations]
symbol:EIF2C3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 OMA:GRSMPEP EMBL:AAEX03009638
Ensembl:ENSCAFT00000005611 Uniprot:E2R0U1
Length = 860
Score = 381 (139.2 bits), Expect = 4.9e-64, Sum P(2) = 4.9e-64
Identities = 96/263 (36%), Positives = 135/263 (51%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+F +V D + V R+LPAPML+Y GR +V P G W+M K+ G +++W
Sbjct: 397 EFQFKVRDEMAHVTGRVLPAPMLQY--GGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+T C + + GF +L + GM +P + +E H K T
Sbjct: 455 ACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 513 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + P V +P I GADVTHP G+ PSI A V SMD ++Y
Sbjct: 571 KLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAFVGSMD-AHPSRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EIIQDL +++
Sbjct: 627 CATVRVQRPRQEIIQDLASMVRE 649
Score = 309 (113.8 bits), Expect = 4.9e-64, Sum P(2) = 4.9e-64
Identities = 83/250 (33%), Positives = 119/250 (47%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 17 VPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 76
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V I+ S
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDVTLPGEGGKDRPFKVSIKFVS 129
Query: 151 Q---------------PYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ P L K I +DVVLR PS K+T VGRSFFS G
Sbjct: 130 RVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 189
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-R 249
LG G E W G+ QS+RP + + LNI S Y R
Sbjct: 190 DHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPR 249
Query: 250 PLSDQVRLKF 259
PL+D R+KF
Sbjct: 250 PLTDSHRVKF 259
Score = 164 (62.8 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 44/98 (44%), Positives = 50/98 (51%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI A V SMD ++Y V Q +EIIQDL
Sbjct: 585 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAFVGSMD-AHPSRYCATVRVQRPRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------ASMVRELLIQFYKSTRFKPTRIIFY 668
>UNIPROTKB|Q6DCX2 [details] [associations]
symbol:eif2c2 "Protein argonaute-2" species:8355 "Xenopus
laevis" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=ISS] [GO:0005845 "mRNA cap binding complex" evidence=ISS]
[GO:0016442 "RNA-induced silencing complex" evidence=ISS]
[GO:0031054 "pre-miRNA processing" evidence=ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISS] [GO:0035197 "siRNA
binding" evidence=ISS] [GO:0035278 "negative regulation of
translation involved in gene silencing by miRNA" evidence=ISS]
[GO:0035279 "mRNA cleavage involved in gene silencing by miRNA"
evidence=ISS] [GO:0045947 "negative regulation of translational
initiation" evidence=ISS] [GO:0070551 "endoribonuclease activity,
cleaving siRNA-paired mRNA" evidence=ISS] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0046872 GO:GO:0045947 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932
GO:GO:0035068 GO:GO:0035278 GO:GO:0035197 CTD:27161 GO:GO:0005845
GO:GO:0016442 GO:GO:0070551 GO:GO:0000340 GO:GO:0035279
GO:GO:0031054 EMBL:BC077863 RefSeq:NP_001086988.1 UniGene:Xl.43287
HSSP:Q9UL18 ProteinModelPortal:Q6DCX2 SMR:Q6DCX2 GeneID:446823
KEGG:xla:446823 Xenbase:XB-GENE-1001922 Uniprot:Q6DCX2
Length = 862
Score = 373 (136.4 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 399 EFGIMVKDDMTDVTGRVLQPPSILY--GGRSKAIATPVQGVWDMRNKQFHTGIEIKVWAI 456
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P + +E H K T
Sbjct: 457 ACFAPQRQCTEVHLKTFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 514
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 515 YTG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINV 572
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 573 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 628
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 629 CATVRVQQHRQEIIQDLSAMVRE 651
Score = 314 (115.6 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 79/241 (32%), Positives = 121/241 (50%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RP FGT GR ++AN F + + K +I+HYD+ I PE +++NREI+ ++ ++
Sbjct: 28 PPRPDFGTSGRTIKLQANVFEMDIPKIEIYHYDIDIKPEKCPRRVNREIVEHMVQHFKAQ 87
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P +DG K++YTA PLP +++ + L G +R F+V I+ +
Sbjct: 88 IFGDRKPVFDGRKNLYTAMPLPI-ARDKQVELEVTLPGE------GKDRIFKVAIKWMAC 140
Query: 152 PYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIE 199
+ L + +Q LDVV+R PS ++T VGRSFF+ G LG G E
Sbjct: 141 VSLQALHDALSGRLPNVPFETVQALDVVMRHLPSMRYTPVGRSFFTASEGCANPLGGGRE 200
Query: 200 YWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLK 258
W G+ QS+RP+ + + LNI S Y +PL+D R+K
Sbjct: 201 VWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFMCEVLDFKSIEEQQKPLTDSQRVK 260
Query: 259 F 259
F
Sbjct: 261 F 261
Score = 177 (67.4 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 587 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 645
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 646 -------------SAMVRELLIQFYKSTRFKPTRIIFY 670
>UNIPROTKB|Q5ZLG4 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035278 HSSP:Q9UL18 CTD:192669 GO:GO:0006402
EMBL:AJ719770 IPI:IPI00594029 RefSeq:NP_001026071.1
UniGene:Gga.22391 ProteinModelPortal:Q5ZLG4 SMR:Q5ZLG4
STRING:Q5ZLG4 PRIDE:Q5ZLG4 GeneID:419628 KEGG:gga:419628
InParanoid:Q5ZLG4 NextBio:20822658 Uniprot:Q5ZLG4
Length = 860
Score = 377 (137.8 bits), Expect = 2.2e-63, Sum P(2) = 2.2e-63
Identities = 96/263 (36%), Positives = 134/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+F +V D + V R+LPAPML+Y GR +V P G W+M K+ G +++W
Sbjct: 397 EFQFKVRDEMAHVTGRVLPAPMLQY--GGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAI 454
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+T C + + GF +L + GM +P Y + H K T
Sbjct: 455 ACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCF--CKYAQGADSVGPMFRHLKNT 512
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KR +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 513 YSG--LQLIIVILPGKTPVYAEVKRAGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINV 570
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + P V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 571 KLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRY 626
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EIIQDL +++
Sbjct: 627 CATVRVQRPRQEIIQDLASMVRE 649
Score = 307 (113.1 bits), Expect = 2.2e-63, Sum P(2) = 2.2e-63
Identities = 80/250 (32%), Positives = 119/250 (47%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 17 VPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 76
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V I+ S
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDVTLPGEGGKDRPFKVSIKFVS 129
Query: 151 QPYVYTLQKF--------------------IQVLDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ + L + + +DVVLR PS K+T VGRSFFS G
Sbjct: 130 RVSWHLLHEVLTGRTLPEPLEPDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 189
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-R 249
LG G E W G+ QS+RP + + LNI S Y R
Sbjct: 190 DHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPR 249
Query: 250 PLSDQVRLKF 259
PL+D R+KF
Sbjct: 250 PLTDSHRVKF 259
Score = 169 (64.5 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 45/98 (45%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EIIQDL
Sbjct: 585 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDL 643
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 644 -------------ASMVRELLIQFYKSTRFKPTRIIFY 668
>UNIPROTKB|F1NL39 [details] [associations]
symbol:LOC100858102 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005845 "mRNA cap binding complex"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=IEA]
[GO:0035197 "siRNA binding" evidence=IEA] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0045947
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0000932 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0035197 GO:GO:0005845
GO:GO:0016442 GO:GO:0070551 GO:GO:0000340 GO:GO:0035279
GO:GO:0031054 OMA:AIKWMSC EMBL:AADN02037477 EMBL:AADN02037478
IPI:IPI00572529 Ensembl:ENSGALT00000026092 Uniprot:F1NL39
Length = 856
Score = 372 (136.0 bits), Expect = 3.6e-63, Sum P(2) = 3.6e-63
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 393 EFGIMVKDEMTDVTGRVLQPPSILY--GGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAI 450
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P + +E H K T
Sbjct: 451 ACFAPQRQCTEVHLKTFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 508
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 509 YTG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINV 566
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 567 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 622
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 623 CATVRVQQHRQEIIQDLAAMVRE 645
Score = 310 (114.2 bits), Expect = 3.6e-63, Sum P(2) = 3.6e-63
Identities = 82/247 (33%), Positives = 121/247 (48%)
Query: 28 AVRLPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINL 87
A + P RP FGT GR ++AN F + + K DI+HY++ I PE +++NREI+ ++
Sbjct: 19 AFKPPPRPDFGTSGRTIKLQANFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQH 78
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVV 145
++ G+R P +DG K++YT LP + E +TL G +R F+V
Sbjct: 79 FKTQIFGDRKPVFDGRKNLYTVMALPIVTDKVELEVTLPGE----------GKDRIFKVA 128
Query: 146 IRLASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQ 193
I+ S + L + IQ LDVV+R PS ++T VGRSFF+ G
Sbjct: 129 IKWMSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNP 188
Query: 194 LGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLS 252
LG G E W G+ QS+RP+ + + LNI S Y +PL+
Sbjct: 189 LGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLT 248
Query: 253 DQVRLKF 259
D R+KF
Sbjct: 249 DSQRVKF 255
Score = 177 (67.4 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 581 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 639
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 640 -------------AAMVRELLIQFYKSTRFKPTRIIFY 664
>UNIPROTKB|F1P3Y9 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005844 "polysome" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OMA:NNLVKRA GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 EMBL:AADN02043843
EMBL:AADN02043844 IPI:IPI00597606 Ensembl:ENSGALT00000003529
Uniprot:F1P3Y9
Length = 853
Score = 387 (141.3 bits), Expect = 5.1e-63, Sum P(2) = 5.1e-63
Identities = 96/263 (36%), Positives = 139/263 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI+V D +T V R+LPAP+L+Y GR ++ P+ G W+M K+ +NG ++VW
Sbjct: 388 EFGIKVKDDMTEVTGRVLPAPILQY--GGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAI 445
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + + F +L + GM +P + +E H K T
Sbjct: 446 ACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 503
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 504 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINV 561
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 562 KLGGINNIL---VPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRY 617
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EII+DL +++
Sbjct: 618 CATVRVQRPRQEIIEDLSYMVRE 640
Score = 293 (108.2 bits), Expect = 5.1e-63, Sum P(2) = 5.1e-63
Identities = 75/234 (32%), Positives = 113/234 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + AN+F V + K D++HY+V I P+ +++NRE++ ++ ++
Sbjct: 18 PRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQ 77
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTER--QFRVVIR 147
G+R P YDG K+IYT LP E +F +T+ +R++
Sbjct: 78 IFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWMAIVSWRMLHE 137
Query: 148 -LASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQ 206
L S L+ +Q LDV +R S ++T VGRSFFS G LG G E W G+ Q
Sbjct: 138 ALVSGQIPVPLES-VQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQ 196
Query: 207 SLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-RPLSDQVRLKF 259
S+RP + + LNI S Y +PL+D R++F
Sbjct: 197 SVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRF 250
Score = 158 (60.7 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 453 VTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYK 512
V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EII+DL
Sbjct: 578 VFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-- 634
Query: 513 SIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 635 -----------SYMVRELLIQFYKSTRFKPTRIIFY 659
>UNIPROTKB|F1PGP5 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 CTD:26523
GeneTree:ENSGT00640000091310 EMBL:AAEX03009640 EMBL:AAEX03009639
RefSeq:XP_532563.3 ProteinModelPortal:F1PGP5
Ensembl:ENSCAFT00000005625 GeneID:475337 KEGG:cfa:475337
OMA:XGEGSHI Uniprot:F1PGP5
Length = 857
Score = 387 (141.3 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 96/263 (36%), Positives = 139/263 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI+V D +T V R+LPAP+L+Y GR ++ P+ G W+M K+ +NG ++VW
Sbjct: 394 EFGIKVKDDMTEVTGRVLPAPILQY--GGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAI 451
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + + F +L + GM +P + +E H K T
Sbjct: 452 ACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 509
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 510 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINV 567
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 568 KLGGINNIL---VPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRY 623
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EII+DL +++
Sbjct: 624 CATVRVQRPRQEIIEDLSYMVRE 646
Score = 292 (107.8 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 75/234 (32%), Positives = 113/234 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + AN+F V + K D++HY+V I P+ +++NRE++ ++ ++
Sbjct: 24 PRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQ 83
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTER--QFRVVIR 147
G+R P YDG K+IYT LP E +F +T+ +R++
Sbjct: 84 IFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHE 143
Query: 148 -LASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQ 206
L S L+ +Q LDV +R S ++T VGRSFFS G LG G E W G+ Q
Sbjct: 144 ALVSGQIPVPLES-VQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQ 202
Query: 207 SLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-RPLSDQVRLKF 259
S+RP + + LNI S Y +PL+D R++F
Sbjct: 203 SVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRF 256
Score = 158 (60.7 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 453 VTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYK 512
V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EII+DL
Sbjct: 584 VFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-- 640
Query: 513 SIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 641 -----------SYMVRELLIQFYKSTRFKPTRIIFY 665
>UNIPROTKB|Q9UL18 [details] [associations]
symbol:EIF2C1 "Protein argonaute-1" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=IDA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005844 "polysome" evidence=IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0010467
GO:GO:0006355 GO:GO:0007219 GO:GO:0006351 GO:GO:0003723
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:AF093097
EMBL:AL139286 EMBL:BC063275 IPI:IPI00007736 RefSeq:NP_036331.1
UniGene:Hs.22867 PDB:1SI2 PDB:1SI3 PDBsum:1SI2 PDBsum:1SI3
ProteinModelPortal:Q9UL18 SMR:Q9UL18 DIP:DIP-29193N IntAct:Q9UL18
STRING:Q9UL18 PhosphoSite:Q9UL18 DMDM:88984241 PaxDb:Q9UL18
PRIDE:Q9UL18 Ensembl:ENST00000373204 GeneID:26523 KEGG:hsa:26523
UCSC:uc001bzk.3 CTD:26523 GeneCards:GC01P036335 HGNC:HGNC:3262
MIM:606228 neXtProt:NX_Q9UL18 PharmGKB:PA27693 InParanoid:Q9UL18
OMA:NNLVKRA OrthoDB:EOG4229J0 PhylomeDB:Q9UL18 ChiTaRS:EIF2C1
EvolutionaryTrace:Q9UL18 GenomeRNAi:26523 NextBio:48846
ArrayExpress:Q9UL18 Bgee:Q9UL18 CleanEx:HS_EIF2C1
Genevestigator:Q9UL18 GermOnline:ENSG00000092847 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0000956
Uniprot:Q9UL18
Length = 857
Score = 387 (141.3 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 96/263 (36%), Positives = 139/263 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI+V D +T V R+LPAP+L+Y GR ++ P+ G W+M K+ +NG ++VW
Sbjct: 394 EFGIKVKDDMTEVTGRVLPAPILQY--GGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAI 451
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + + F +L + GM +P + +E H K T
Sbjct: 452 ACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 509
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 510 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINV 567
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 568 KLGGINNIL---VPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRY 623
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EII+DL +++
Sbjct: 624 CATVRVQRPRQEIIEDLSYMVRE 646
Score = 292 (107.8 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 75/234 (32%), Positives = 113/234 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + AN+F V + K D++HY+V I P+ +++NRE++ ++ ++
Sbjct: 24 PRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQ 83
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTER--QFRVVIR 147
G+R P YDG K+IYT LP E +F +T+ +R++
Sbjct: 84 IFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHE 143
Query: 148 -LASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQ 206
L S L+ +Q LDV +R S ++T VGRSFFS G LG G E W G+ Q
Sbjct: 144 ALVSGQIPVPLES-VQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQ 202
Query: 207 SLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-RPLSDQVRLKF 259
S+RP + + LNI S Y +PL+D R++F
Sbjct: 203 SVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRF 256
Score = 158 (60.7 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 453 VTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYK 512
V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EII+DL
Sbjct: 584 VFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-- 640
Query: 513 SIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 641 -----------SYMVRELLIQFYKSTRFKPTRIIFY 665
>UNIPROTKB|F1SV63 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0005844 GO:GO:0035278 GO:GO:0000956
GeneTree:ENSGT00640000091310 OMA:XGEGSHI EMBL:AEMK01190523
EMBL:CU929817 ProteinModelPortal:F1SV63 SMR:F1SV63 PRIDE:F1SV63
Ensembl:ENSSSCT00000004026 Uniprot:F1SV63
Length = 857
Score = 387 (141.3 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 96/263 (36%), Positives = 139/263 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI+V D +T V R+LPAP+L+Y GR ++ P+ G W+M K+ +NG ++VW
Sbjct: 394 EFGIKVKDDMTEVTGRVLPAPILQY--GGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAI 451
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + + F +L + GM +P + +E H K T
Sbjct: 452 ACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 509
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 510 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINV 567
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 568 KLGGINNIL---VPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRY 623
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EII+DL +++
Sbjct: 624 CATVRVQRPRQEIIEDLSYMVRE 646
Score = 292 (107.8 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 75/234 (32%), Positives = 113/234 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + AN+F V + K D++HY+V I P+ +++NRE++ ++ ++
Sbjct: 24 PRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQ 83
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTER--QFRVVIR 147
G+R P YDG K+IYT LP E +F +T+ +R++
Sbjct: 84 IFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHE 143
Query: 148 -LASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQ 206
L S L+ +Q LDV +R S ++T VGRSFFS G LG G E W G+ Q
Sbjct: 144 ALVSGQIPVPLES-VQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQ 202
Query: 207 SLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-RPLSDQVRLKF 259
S+RP + + LNI S Y +PL+D R++F
Sbjct: 203 SVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRF 256
Score = 158 (60.7 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 453 VTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYK 512
V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EII+DL
Sbjct: 584 VFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-- 640
Query: 513 SIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 641 -----------SYMVRELLIQFYKSTRFKPTRIIFY 665
>MGI|MGI:2446630 [details] [associations]
symbol:Ago1 "argonaute RISC catalytic subunit 1"
species:10090 "Mus musculus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005844 "polysome" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISO;IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446630
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 CTD:26523 OMA:NNLVKRA
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068 GO:GO:0005844
GO:GO:0035278 GO:GO:0000956 EMBL:AB081471 EMBL:AL606935
EMBL:AL606976 EMBL:BC129914 IPI:IPI00943422 RefSeq:NP_700452.2
UniGene:Mm.30800 ProteinModelPortal:Q8CJG1 SMR:Q8CJG1 IntAct:Q8CJG1
STRING:Q8CJG1 PhosphoSite:Q8CJG1 PaxDb:Q8CJG1 PRIDE:Q8CJG1
Ensembl:ENSMUST00000097888 GeneID:236511 KEGG:mmu:236511
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 InParanoid:A1L365
NextBio:382987 Bgee:Q8CJG1 CleanEx:MM_EIF2C1 Genevestigator:Q8CJG1
Uniprot:Q8CJG1
Length = 857
Score = 387 (141.3 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 96/263 (36%), Positives = 139/263 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI+V D +T V R+LPAP+L+Y GR ++ P+ G W+M K+ +NG ++VW
Sbjct: 394 EFGIKVKDDMTEVTGRVLPAPILQY--GGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAI 451
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + + F +L + GM +P + +E H K T
Sbjct: 452 ACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 509
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 510 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINV 567
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 568 KLGGINNIL---VPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRY 623
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EII+DL +++
Sbjct: 624 CATVRVQRPRQEIIEDLSYMVRE 646
Score = 292 (107.8 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 75/234 (32%), Positives = 113/234 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + AN+F V + K D++HY+V I P+ +++NRE++ ++ ++
Sbjct: 24 PRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQ 83
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTER--QFRVVIR 147
G+R P YDG K+IYT LP E +F +T+ +R++
Sbjct: 84 IFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHE 143
Query: 148 -LASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQ 206
L S L+ +Q LDV +R S ++T VGRSFFS G LG G E W G+ Q
Sbjct: 144 ALVSGQIPVPLES-VQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQ 202
Query: 207 SLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-RPLSDQVRLKF 259
S+RP + + LNI S Y +PL+D R++F
Sbjct: 203 SVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRF 256
Score = 158 (60.7 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 453 VTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYK 512
V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EII+DL
Sbjct: 584 VFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-- 640
Query: 513 SIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 641 -----------SYMVRELLIQFYKSTRFKPTRIIFY 665
>RGD|1304619 [details] [associations]
symbol:Ago1 "argonaute RISC catalytic component 1" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005844 "polysome" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA;ISO] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA;ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:1304619
GO:GO:0005737 GO:GO:0003723 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 CTD:26523
OMA:NNLVKRA OrthoDB:EOG4229J0 GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 IPI:IPI00359345
RefSeq:NP_001178694.1 UniGene:Rn.62413 Ensembl:ENSRNOT00000037728
GeneID:313594 KEGG:rno:313594 UCSC:RGD:1304619 NextBio:666514
Uniprot:D4AC38
Length = 857
Score = 387 (141.3 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 96/263 (36%), Positives = 139/263 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI+V D +T V R+LPAP+L+Y GR ++ P+ G W+M K+ +NG ++VW
Sbjct: 394 EFGIKVKDDMTEVTGRVLPAPILQY--GGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAI 451
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + + F +L + GM +P + +E H K T
Sbjct: 452 ACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 509
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 510 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINV 567
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 568 KLGGINNIL---VPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRY 623
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EII+DL +++
Sbjct: 624 CATVRVQRPRQEIIEDLSYMVRE 646
Score = 292 (107.8 bits), Expect = 6.6e-63, Sum P(2) = 6.6e-63
Identities = 75/234 (32%), Positives = 113/234 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + AN+F V + K D++HY+V I P+ +++NRE++ ++ ++
Sbjct: 24 PRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQ 83
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTER--QFRVVIR 147
G+R P YDG K+IYT LP E +F +T+ +R++
Sbjct: 84 IFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHE 143
Query: 148 -LASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQ 206
L S L+ +Q LDV +R S ++T VGRSFFS G LG G E W G+ Q
Sbjct: 144 ALVSGQIPVPLES-VQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQ 202
Query: 207 SLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-RPLSDQVRLKF 259
S+RP + + LNI S Y +PL+D R++F
Sbjct: 203 SVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRF 256
Score = 158 (60.7 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 453 VTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYK 512
V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EII+DL
Sbjct: 584 VFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-- 640
Query: 513 SIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 641 -----------SYMVRELLIQFYKSTRFKPTRIIFY 665
>UNIPROTKB|D4A2P5 [details] [associations]
symbol:Eif2c4 "Protein Eif2c4" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 RGD:1304583 GO:GO:0003723 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0035068 GO:GO:0035278 GO:GO:0006402 IPI:IPI00950544
Ensembl:ENSRNOT00000066541 Uniprot:D4A2P5
Length = 995
Score = 331 (121.6 bits), Expect = 6.9e-63, Sum P(3) = 6.9e-63
Identities = 77/233 (33%), Positives = 114/233 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYDV I PE +++NRE++ ++ +++
Sbjct: 16 PRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMQ 75
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P YDG +++YTA PLP + + + V ++L +
Sbjct: 76 IFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSVQWVSVVSLQLLLE 135
Query: 152 PYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
L + +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 136 ALAGHLSEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 195
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 196 VRPAMWKMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKF 248
Score = 308 (113.5 bits), Expect = 6.9e-63, Sum P(3) = 6.9e-63
Identities = 79/180 (43%), Positives = 100/180 (55%)
Query: 369 HNKTTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVA 428
H K T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+
Sbjct: 503 HLKMTYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLC 560
Query: 429 LKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWP 488
LKIN K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD
Sbjct: 561 LKINAKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG- 616
Query: 489 EVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
++Y V Q +EI Q+L S Q+ + L M RELLI F ST KP II+Y
Sbjct: 617 HPSRYCATVRVQTSRQEIAQELLFS-QEVVQDLT--SMARELLIQFYKSTRFKPTRIIYY 673
Score = 116 (45.9 bits), Expect = 6.9e-63, Sum P(3) = 6.9e-63
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 366 EFGIVVHNEMTELMGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 423
Query: 317 MNFS 320
F+
Sbjct: 424 ACFA 427
>UNIPROTKB|F1MXX2 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OMA:NNLVKRA GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 EMBL:DAAA02009205
IPI:IPI00686174 Ensembl:ENSBTAT00000016254 Uniprot:F1MXX2
Length = 877
Score = 387 (141.3 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 96/263 (36%), Positives = 139/263 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI+V D +T V R+LPAP+L+Y GR ++ P+ G W+M K+ +NG ++VW
Sbjct: 414 EFGIKVKDDMTEVTGRVLPAPILQY--GGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAI 471
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + + F +L + GM +P + +E H K T
Sbjct: 472 ACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 529
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 530 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINV 587
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 588 KLGGINNIL---VPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRY 643
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EII+DL +++
Sbjct: 644 CATVRVQRPRQEIIEDLSYMVRE 666
Score = 290 (107.1 bits), Expect = 1.2e-62, Sum P(2) = 1.2e-62
Identities = 70/201 (34%), Positives = 104/201 (51%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + AN+F V + K D++HY+V I P+ +++NRE++ ++ ++
Sbjct: 44 PRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQ 103
Query: 92 NLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTER--QFRVVIR 147
G+R P YDG K+IYT LP E +F +T+ +R++
Sbjct: 104 IFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHE 163
Query: 148 -LASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQ 206
L S L+ +Q LDV +R S ++T VGRSFFS G LG G E W G+ Q
Sbjct: 164 ALVSGQIPVPLES-VQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQ 222
Query: 207 SLRPTQFGLSLNIGFSHYILY 227
S+RP + + LNI S Y
Sbjct: 223 SVRPAMWKMMLNIDVSATAFY 243
Score = 158 (60.7 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 453 VTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYK 512
V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EII+DL
Sbjct: 604 VFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-- 660
Query: 513 SIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 661 -----------SYMVRELLIQFYKSTRFKPTRIIFY 685
>UNIPROTKB|Q75HC2 [details] [associations]
symbol:AGO7 "Protein argonaute 7" species:39947 "Oryza
sativa Japonica Group" [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0016246
GO:GO:0003676 EMBL:DP000009 EMBL:AP008209 SUPFAM:SSF53098
eggNOG:NOG279895 KO:K11593 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 HSSP:Q9UL18 OMA:YSPVEFQ ProtClustDB:CLSN2682549
GO:GO:0010492 GO:GO:0010599 GO:GO:0010267 GO:GO:0040034
GO:GO:0010050 EMBL:EF486281 EMBL:AB353924 EMBL:AC135597
RefSeq:NP_001050473.2 UniGene:Os.75048
EnsemblPlants:LOC_Os03g33650.1 GeneID:4333232
KEGG:dosa:Os03t0449200-00 KEGG:osa:4333232 Gramene:Q75HC2
Uniprot:Q75HC2
Length = 1048
Score = 426 (155.0 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 104/306 (33%), Positives = 158/306 (51%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPD-FG-QWNMINKKMFNGG 309
SD +F +QV+ +T + R+L P LK SGR + PD F QW+ ++ + G
Sbjct: 573 SDTYADQFSLQVSKHMTKLSGRVLLPPKLKLGSSGRIKDITPDRFDRQWSFLDSHVAEGS 632
Query: 310 RVEVWTCMNFSTCLNQD--VIGFCQRLVDMCNRKGMVFNRRPVI-PISSYNPYQIEKALV 366
+++ W ++F Q + F +L + C + G++ N++ +I PI ++
Sbjct: 633 KIKSWALISFGGTPEQHFCITKFVNQLSNRCEQLGILLNKKTIISPIFERIQLLNNVGIL 692
Query: 367 DVHNKTTQPGKQ--LQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYF 424
+ K Q LQLLI ++ Y +KR+ ET +G+V+QCC + S Q+
Sbjct: 693 EGKLKKIQEAASGNLQLLICVMERRHQGYADLKRIAETSIGVVTQCCLYSNLSKLTSQFL 752
Query: 425 ENVALKINVKVGGRNTVLDDAVQKRIPLV--TDRPTIIFGADVTHPQPGEDSSPSIVAVV 482
N+ALKIN K+GG N L + +IP + ++ P + GADVTHP P +DSSPS+VAVV
Sbjct: 753 TNLALKINAKLGGCNIALYSSFPCQIPRIFLSEEPVMFMGADVTHPHPLDDSSPSVVAVV 812
Query: 483 ASMDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKP 542
ASM+WP KY + +Q H +EII+ L D G ELL F + P
Sbjct: 813 ASMNWPSANKYISRMRSQTHRKEIIEQL-----DVMAG--------ELLEEFLKEVGKLP 859
Query: 543 ESIIFY 548
IIF+
Sbjct: 860 SRIIFF 865
Score = 138 (53.6 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 158 QKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGLSL 217
Q ++ LDVVLR E +VGRS ++ +G +G G RG+FQ LRPT+ GL+L
Sbjct: 342 QDYLHALDVVLREGAMESSILVGRSLYARSMGEARDIGGGAVGLRGFFQRLRPTKQGLAL 401
Query: 218 NIGFS 222
N+ S
Sbjct: 402 NVDLS 406
Score = 108 (43.1 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 34 RPGFG-TRGRKCVVRANHFMVQLAK-RDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
RP G G + + ANHF+VQ + I HY+V I P S++ R I +L+
Sbjct: 197 RPDMGGVEGAEIPLSANHFLVQFDPGQKIFHYNVDISPR-PSKETARMIKKKLVEENPSV 255
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESK--EFIITL 123
G + PA+DG K++Y+ P+ F+ EF ++L
Sbjct: 256 LSGSQ-PAFDGRKNLYS--PVRFQEDRVEFFVSL 286
>TAIR|locus:2007111 [details] [associations]
symbol:AGO7 "ARGONAUTE7" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0016246 "RNA
interference" evidence=IEP] [GO:0035195 "gene silencing by miRNA"
evidence=TAS] [GO:0040034 "regulation of development,
heterochronic" evidence=IMP] [GO:0010050 "vegetative phase change"
evidence=IMP] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=IMP] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=IMP] [GO:0010599
"production of lsiRNA involved in RNA interference" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0006952 GO:GO:0006417 GO:GO:0006355
GO:GO:0006351 GO:GO:0003723 GO:GO:0030529 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AC073178 EMBL:AY394564
IPI:IPI00543975 RefSeq:NP_177103.1 UniGene:At.35421
ProteinModelPortal:Q9C793 SMR:Q9C793 STRING:Q9C793
EnsemblPlants:AT1G69440.1 GeneID:843276 KEGG:ath:AT1G69440
TAIR:At1g69440 InParanoid:Q9C793 OMA:YSPVEFQ PhylomeDB:Q9C793
ProtClustDB:CLSN2682549 Genevestigator:Q9C793 GO:GO:0035195
GO:GO:0010492 GO:GO:0010599 GO:GO:0010267 GO:GO:0040034
GO:GO:0010050 Uniprot:Q9C793
Length = 990
Score = 386 (140.9 bits), Expect = 4.5e-59, Sum P(3) = 4.5e-59
Identities = 103/307 (33%), Positives = 153/307 (49%)
Query: 250 PLSDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGG 309
P S +F ++V+ +T + RIL P LK + P N+ K+F G
Sbjct: 525 PSSGNQTREFNLEVSREMTLLKGRILQPPKLKLDR--------PR----NLKESKVFKGT 572
Query: 310 RVEVWTCMNFSTCLNQD--VIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEK--AL 365
R+E W M+ +Q + F L C G VF + + + + P I +L
Sbjct: 573 RIERWALMSIGGSSDQKSTIPKFINELTQKCEHLG-VFLSKNTLSSTFFEPSHILNNISL 631
Query: 366 VDVHNKTTQ--PGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQY 423
++ K Q LQL+I ++ YG +KR+ ET +G+V+QCC + + + Q+
Sbjct: 632 LESKLKEIQRAASNNLQLIICVMEKKHKGYGDLKRISETRIGVVTQCCLYPNITKLSSQF 691
Query: 424 FENVALKINVKVGGRNTVLDDAVQKRIP--LVTDRPTIIFGADVTHPQPGEDSSPSIVAV 481
N+ALKIN K+GG T L +++ IP L D P I GADVTHP P +D SPS+ AV
Sbjct: 692 VSNLALKINAKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGADVTHPHPFDDCSPSVAAV 751
Query: 482 VASMDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRK 541
V S++WPE +Y + +Q H +EIIQDL L M++ELL F + +
Sbjct: 752 VGSINWPEANRYVSRMRSQTHRQEIIQDL---------DL----MVKELLDDFYKAVKKL 798
Query: 542 PESIIFY 548
P IIF+
Sbjct: 799 PNRIIFF 805
Score = 157 (60.3 bits), Expect = 4.5e-59, Sum P(3) = 4.5e-59
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 159 KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGLSLN 218
++I LDV+LR P EK T +GRSF+S+ +G ++G G RG+FQSLR TQ GL+LN
Sbjct: 297 EYIHALDVILRENPMEKCTSIGRSFYSSSMGGSKEIGGGAVGLRGFFQSLRHTQQGLALN 356
Query: 219 IGFS 222
+ S
Sbjct: 357 MDLS 360
Score = 125 (49.1 bits), Expect = 4.5e-59, Sum P(3) = 4.5e-59
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 34 RPGFGTR-GRKCVVRANHFMVQL-AKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
RP FG + G + ANHF+V+ + + I+HY+V I P+ S++I R I +L+ R +
Sbjct: 153 RPDFGGQDGSVIYLLANHFLVKFDSSQRIYHYNVEISPQ-PSKEIARMIKQKLVETDRNS 211
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESK--EFIITL 123
G +PA+DG ++IY+ P+ F+ EF + L
Sbjct: 212 FSGV-VPAFDGRQNIYS--PVEFQGDRLEFFVNL 242
>UNIPROTKB|Q6DJB9 [details] [associations]
symbol:eif2c2 "Protein argonaute-2" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISS] [GO:0005845 "mRNA cap binding complex"
evidence=ISS] [GO:0016442 "RNA-induced silencing complex"
evidence=ISS] [GO:0031054 "pre-miRNA processing" evidence=ISS]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=ISS]
[GO:0035197 "siRNA binding" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0045947 "negative regulation of
translational initiation" evidence=ISS] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0046872
GO:GO:0045947 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068 GO:GO:0035278
GO:GO:0035197 CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 HSSP:Q9UL18 EMBL:BC075263
RefSeq:NP_001004877.1 UniGene:Str.65293 ProteinModelPortal:Q6DJB9
SMR:Q6DJB9 STRING:Q6DJB9 GeneID:448205 KEGG:xtr:448205
Xenbase:XB-GENE-1001916 InParanoid:Q6DJB9 Bgee:Q6DJB9
Uniprot:Q6DJB9
Length = 871
Score = 355 (130.0 bits), Expect = 4.5e-59, Sum P(2) = 4.5e-59
Identities = 98/272 (36%), Positives = 133/272 (48%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGR-----EASVN-----PDFGQWNMINKKMFN 307
+FGI V D +T V R+L P + Y GR A +N P G W+M NK+
Sbjct: 399 EFGIMVKDDMTDVTGRVLQPPSILY--GGRVWEEPNAPLNKAIATPVQGVWDMRNKQFHT 456
Query: 308 GGRVEVWTCMNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKA 364
G ++VW F+ C + F ++L + GM +P + +E
Sbjct: 457 GIEIKVWAIACFAPQRQCTEVHLKTFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPM 516
Query: 365 LVDVHNKTTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYF 424
H K T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q
Sbjct: 517 FR--HLKNTYTG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTL 572
Query: 425 ENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVAS 484
N+ LKINVK+GG N +L Q R P V +P I GADVTHP G+ PSI AVV S
Sbjct: 573 SNLCLKINVKLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGS 629
Query: 485 MDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQD 516
MD +Y V Q H +EIIQDL +++
Sbjct: 630 MD-AHPNRYCATVRVQQHRQEIIQDLSAMVRE 660
Score = 313 (115.2 bits), Expect = 4.5e-59, Sum P(2) = 4.5e-59
Identities = 79/241 (32%), Positives = 121/241 (50%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RP FGT GR ++AN F + + K +I+HY++ I PE +++NREI+ ++ ++
Sbjct: 28 PPRPDFGTSGRTIKLQANFFEMDIPKIEIYHYEIDIKPEKCPRRVNREIVEHMVQHFKAQ 87
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P +DG K++YTA PLP +++ + L G +R F+V I+ +
Sbjct: 88 IFGDRKPVFDGRKNLYTAMPLPI-ARDKQVELEVTLPGE------GKDRIFKVAIKWMAC 140
Query: 152 PYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIE 199
+ L + IQ LDVV+R PS ++T VGRSFF+ G LG G E
Sbjct: 141 VSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCANPLGGGRE 200
Query: 200 YWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLK 258
W G+ QS+RP+ + + LNI S Y +PL+D R+K
Sbjct: 201 VWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFMCEVLDFKSIEEQQKPLTDSQRVK 260
Query: 259 F 259
F
Sbjct: 261 F 261
Score = 177 (67.4 bits), Expect = 4.8e-39, Sum P(2) = 4.8e-39
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 596 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 654
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 655 -------------SAMVRELLIQFYKSTRFKPTRIIFY 679
>UNIPROTKB|F1PQZ7 [details] [associations]
symbol:EIF2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:AAEX03008878
Ensembl:ENSCAFT00000001857 OMA:CQRPREQ Uniprot:F1PQZ7
Length = 813
Score = 374 (136.7 bits), Expect = 9.1e-59, Sum P(2) = 9.1e-59
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 350 EFGIMVKDEMTDVTGRVLQPPSILY--GGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAI 407
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P + +E H K T
Sbjct: 408 ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 465
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 466 YAG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINV 523
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 524 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 579
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 580 CATVRVQQHRQEIIQDLATMVRE 602
Score = 265 (98.3 bits), Expect = 9.1e-59, Sum P(2) = 9.1e-59
Identities = 72/222 (32%), Positives = 108/222 (48%)
Query: 53 VQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLTNLGERIPAYDGMKSIYTAGPL 112
+ + K DI+HY++ I PE +++NREI+ ++ ++ G+R P +DG K++YTA PL
Sbjct: 1 MDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPL 60
Query: 113 PF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQPYVYTLQ------------ 158
P + E +TL G +R F+V I+ S + L
Sbjct: 61 PIGRDKVELEVTLPGE----------GKDRIFKVSIKWVSCVSLQALHDALSGRLPSVPF 110
Query: 159 KFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGLSLN 218
+ IQ LDVV+R PS ++T VGRSFF+ G LG G E W G+ QS+RP+ + + LN
Sbjct: 111 ETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLN 170
Query: 219 IGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
I S Y +PL+D R+KF
Sbjct: 171 IDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKF 212
Score = 175 (66.7 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 538 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 596
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 597 -------------ATMVRELLIQFYKSTRFKPTRIIFY 621
>TAIR|locus:2179008 [details] [associations]
symbol:AGO9 "ARGONAUTE 9" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0035197 "siRNA binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010529
"negative regulation of transposition" evidence=IMP] [GO:0048481
"ovule development" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006952
GO:GO:0006417 GO:GO:0006355 GO:GO:0006351 GO:GO:0010529
GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043 KO:K11593
GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 eggNOG:NOG286051 EMBL:AJ544236 EMBL:AC140977
EMBL:AK221864 IPI:IPI00538032 RefSeq:NP_197613.2 UniGene:At.31104
ProteinModelPortal:Q84VQ0 SMR:Q84VQ0 PaxDb:Q84VQ0 PRIDE:Q84VQ0
EnsemblPlants:AT5G21150.1 GeneID:832241 KEGG:ath:AT5G21150
TAIR:At5g21150 InParanoid:Q84YI4 OMA:QWPLISK PhylomeDB:Q84VQ0
Genevestigator:Q84VQ0 GO:GO:0048481 Uniprot:Q84VQ0
Length = 896
Score = 409 (149.0 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 109/305 (35%), Positives = 157/305 (51%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRV 311
+D V G+ + T V+ RILP PMLK G+ +++P G+WN + K + V
Sbjct: 422 ADPVLQDSGVSIITNFTQVEGRILPTPMLKV---GKGENLSPIKGKWNFMRKTLAEPTTV 478
Query: 312 EVWTCMNFSTCLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNP-YQIEKALVDVHN 370
W +NFS + + + + L+ C R+ + P + + NP ++ A V V N
Sbjct: 479 TRWAVVNFSARCDTNTL--IRDLIK-CGREKGINVEPPFKDVINENPQFRNAPATVRVEN 535
Query: 371 KTTQPGKQLQ----LLIIILPDVRGS--YGRIKRVCETELGIVSQCCQPKHASSRNMQYF 424
Q +L L+ IL + + S YG K+ +LGIV+QC P N QY
Sbjct: 536 MFEQIKSKLPKPPLFLLCILAERKNSDVYGPWKKKNLVDLGIVTQCIAPTRL---NDQYL 592
Query: 425 ENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVAS 484
NV LKIN K+GG N++L +P VT PTII G DV+H PG+ PSI AVV+S
Sbjct: 593 TNVLLKINAKLGGLNSLLAMERSPAMPKVTQVPTIIVGMDVSHGSPGQSDIPSIAAVVSS 652
Query: 485 MDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKIST-NRKPE 543
WP ++KY+ V Q+ E+I +L+K + G M RELL+ F S+ NRKPE
Sbjct: 653 RQWPLISKYKACVRTQSRKMEMIDNLFKPVNGKDEG-----MFRELLLDFYYSSENRKPE 707
Query: 544 SIIFY 548
II +
Sbjct: 708 HIIIF 712
Score = 137 (53.3 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 36/103 (34%), Positives = 60/103 (58%)
Query: 29 VRLPV-RP-GFGTRGRKCVVRANHFMVQLAKRD--IHHYDVSIDPE----VTSQKINREI 80
+ LP+ RP G G++G+K + NHF V+ K HY V+I+ E V ++ I R+I
Sbjct: 33 ILLPMARPRGSGSKGQKIPLLTNHFGVKFNKPSGYFFHYSVAINYEDGRPVEAKGIGRKI 92
Query: 81 ISQLINLYRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITL 123
+ ++ Y+ ++LG + AYDG K+++T G LP +F + L
Sbjct: 93 LDKVQETYQ-SDLGAKYFAYDGEKTLFTVGALPSNKLDFSVVL 134
Score = 114 (45.2 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 157 LQKFIQVLDVVLR-AAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGL 215
LQ ++VLD++LR +A + +V +SFF D+ +G G+ RG+ S R TQ GL
Sbjct: 192 LQDALRVLDIILRQSAARQGCLLVRQSFFHNDVKNFVPIGGGVSGCRGFHSSFRTTQGGL 251
Query: 216 SLNIGFS 222
SLNI S
Sbjct: 252 SLNIDTS 258
>TAIR|locus:2059370 [details] [associations]
symbol:AGO6 "ARGONAUTE 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IGI] [GO:0030422
"production of siRNA involved in RNA interference" evidence=IMP]
[GO:0035197 "siRNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952
GO:GO:0006417 GO:GO:0006351 GO:GO:0030529 SUPFAM:SSF53098
GO:GO:0006342 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0035197 GO:GO:0030422
GO:GO:0006306 EMBL:AC003033 IPI:IPI00537010 PIR:T01113
RefSeq:NP_180853.2 UniGene:At.53011 ProteinModelPortal:O48771
SMR:O48771 STRING:O48771 PaxDb:O48771 PRIDE:O48771
EnsemblPlants:AT2G32940.1 GeneID:817856 KEGG:ath:AT2G32940
TAIR:At2g32940 eggNOG:NOG271046 InParanoid:O48771 OMA:CLDVGKP
PhylomeDB:O48771 Genevestigator:O48771 Uniprot:O48771
Length = 878
Score = 396 (144.5 bits), Expect = 1.4e-57, Sum P(3) = 1.4e-57
Identities = 101/299 (33%), Positives = 153/299 (51%)
Query: 260 GIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRVEVWTCMNF 319
GI + +T V+ R+L PMLK+ G+ P G+WN NK + ++ W +NF
Sbjct: 422 GISIEKEMTQVEGRVLKPPMLKF---GKNEDFQPCNGRWNFNNKMLLEPRAIKSWAIVNF 478
Query: 320 STCLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQ-------IEKALVDVHNKT 372
S + I + L+ RKG+ +R P + Y+ +EK + + K
Sbjct: 479 SFPCDSSHIS--RELISCGMRKGIEIDR-PFALVEEDPQYKKAGPVERVEKMIATMKLKF 535
Query: 373 TQPGKQLQLLIIILPDVRGS--YGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALK 430
P ++ ILP+ + S YG K++C TE GI +QC P S QY NV LK
Sbjct: 536 PDPP---HFILCILPERKTSDIYGPWKKICLTEEGIHTQCICPIKISD---QYLTNVLLK 589
Query: 431 INVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEV 490
IN K+GG N++L IPL+ PT+I G DV+H PG PS+ AVV S WP +
Sbjct: 590 INSKLGGINSLLGIEYSYNIPLINKIPTLILGMDVSHGPPGRADVPSVAAVVGSKCWPLI 649
Query: 491 TKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAF-KISTNRKPESIIFY 548
++YR V Q+ E+I L++ I++ ++G G++ EL + F + S RKP+ II +
Sbjct: 650 SRYRAAVRTQSPRLEMIDSLFQPIENTEKG--DNGIMNELFVEFYRTSRARKPKQIIIF 706
Score = 141 (54.7 bits), Expect = 1.4e-57, Sum P(3) = 1.4e-57
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDI--HHYDVSIDPE----VTSQKINREIISQL 84
+ R G GT G + NHF V + + D+ + Y VSI E V I+R+++ QL
Sbjct: 26 ITTRRGVGTTGNPIELCTNHFNVSVRQPDVVFYQYTVSITTENGDAVDGTGISRKLMDQL 85
Query: 85 INLYRLTNLGERIPAYDGMKSIYTAGPLPFESKEFII 121
Y G+R+ AYDG K++YT GPLP +F++
Sbjct: 86 FKTYSSDLDGKRL-AYDGEKTLYTVGPLPQNEFDFLV 121
Score = 113 (44.8 bits), Expect = 1.4e-57, Sum P(3) = 1.4e-57
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 148 LASQPYVYTLQKFIQ----VLDVVLRAAPSEKHTVVGR-SFFSTDLGPMGQLGDGIEYWR 202
L +Q YT K Q VLD+VLR +E+ ++ R +FF +D PM ++G G+ R
Sbjct: 172 LGTQRGAYTPDKSAQDALRVLDIVLRQQAAERGCLLVRQAFFHSDGHPM-KVGGGVIGIR 230
Query: 203 GYFQSLRPTQFGLSLNIGFS 222
G S RPT GLSLNI S
Sbjct: 231 GLHSSFRPTHGGLSLNIDVS 250
>TAIR|locus:2059258 [details] [associations]
symbol:AGO4 "ARGONAUTE 4" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006342
"chromatin silencing" evidence=RCA;IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005719 "nuclear euchromatin" evidence=IDA] [GO:0015030 "Cajal
body" evidence=IDA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA;IMP] [GO:0006306 "DNA methylation" evidence=RCA;IMP]
[GO:0010495 "long-distance posttranscriptional gene silencing"
evidence=IMP] [GO:0009816 "defense response to bacterium,
incompatible interaction" evidence=IMP] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA;TAS] [GO:0030422 "production
of siRNA involved in RNA interference" evidence=IGI] [GO:0035197
"siRNA binding" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0007267 "cell-cell
signaling" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0016569 "covalent chromatin modification" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0031047 "gene silencing by
RNA" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0043085 "positive regulation
of catalytic activity" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] [GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0019048 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006417 GO:GO:0005730 GO:GO:0006351 GO:GO:0030529
GO:GO:0015030 SUPFAM:SSF53098 GO:GO:0031048 HOGENOM:HOG000116043
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 GO:GO:0030422 EMBL:AC005623 EMBL:AY035081
EMBL:AY051033 IPI:IPI00540794 PIR:A84668 RefSeq:NP_001189613.1
RefSeq:NP_565633.1 UniGene:At.13165 ProteinModelPortal:Q9ZVD5
SMR:Q9ZVD5 DIP:DIP-53402N IntAct:Q9ZVD5 STRING:Q9ZVD5 PaxDb:Q9ZVD5
PRIDE:Q9ZVD5 EnsemblPlants:AT2G27040.1 EnsemblPlants:AT2G27040.2
GeneID:817246 KEGG:ath:AT2G27040 TAIR:At2g27040 eggNOG:NOG286051
InParanoid:Q93VG2 OMA:SFFHNDP PhylomeDB:Q9ZVD5 ProtClustDB:PLN03202
Genevestigator:Q9ZVD5 GO:GO:0005719 GO:GO:0009816 GO:GO:0006306
GO:GO:0051567 Uniprot:Q9ZVD5
Length = 924
Score = 408 (148.7 bits), Expect = 1.4e-57, Sum P(3) = 1.4e-57
Identities = 107/298 (35%), Positives = 154/298 (51%)
Query: 260 GIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRVEVWTCMNF 319
GI ++ T V+ R+LPAP LK G + P G+WN NK+ +++ W +NF
Sbjct: 458 GISISSNFTQVEGRVLPAPKLKM---GCGSETFPRNGRWNFNNKEFVEPTKIQRWVVVNF 514
Query: 320 ST-CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHN--KTTQ-- 374
S C + V+ L+ + KG+ P N ++ ++ V N K Q
Sbjct: 515 SARCNVRQVV---DDLIKIGGSKGIEI-ASPFQVFEEGNQFRRAPPMIRVENMFKDIQSK 570
Query: 375 -PGKQLQLLIIILPDVRGS--YGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKI 431
PG Q ++ +LPD + S YG K+ TE GIV+QC P N QY N+ LKI
Sbjct: 571 LPGVP-QFILCVLPDKKNSDLYGPWKKKNLTEFGIVTQCMAPTRQP--NDQYLTNLLLKI 627
Query: 432 NVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVT 491
N K+GG N++L +++ PTII G DV+H PG+ PSI AVV+S +WP ++
Sbjct: 628 NAKLGGLNSMLSVERTPAFTVISKVPTIILGMDVSHGSPGQSDVPSIAAVVSSREWPLIS 687
Query: 492 KYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTN-RKPESIIFY 548
KYR V Q E+I+ L K + G G+I+ELL+ F S+N RKPE II +
Sbjct: 688 KYRASVRTQPSKAEMIESLVK-----KNGTEDDGIIKELLVDFYTSSNKRKPEHIIIF 740
Score = 150 (57.9 bits), Expect = 1.4e-57, Sum P(3) = 1.4e-57
Identities = 38/102 (37%), Positives = 58/102 (56%)
Query: 29 VRLPV-RPGFGTRGRKCVVRANHFMVQLAKRDIH--HYDVSI---DPEVTSQK-INREII 81
VR+P+ R GFGTRG+K + NHF V +A H HY V++ D QK + R+I+
Sbjct: 53 VRVPMARKGFGTRGQKIPLLTNHFKVDVANLQGHFFHYSVALFYDDGRPVEQKGVGRKIL 112
Query: 82 SQLINLYRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITL 123
++ Y ++L + AYDG K+++T G LP +F + L
Sbjct: 113 DKVHQTYH-SDLDGKEFAYDGEKTLFTYGALPSNKMDFSVVL 153
Score = 93 (37.8 bits), Expect = 1.4e-57, Sum P(3) = 1.4e-57
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 158 QKFIQVLDVVLRA-APSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGLS 216
Q+ I+VLD++LR A + +V +SFF D +G I RG+ S R TQ G+S
Sbjct: 218 QEAIRVLDIILRQHAARQGCLLVRQSFFHNDPTNCEPVGGNILGCRGFHSSFRTTQGGMS 277
Query: 217 LNI 219
LN+
Sbjct: 278 LNM 280
>WB|WBGene00000105 [details] [associations]
symbol:alg-1 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IGI;IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IGI]
[GO:0040025 "vulval development" evidence=IMP] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0035198 "miRNA binding" evidence=IPI]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=IPI]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0009792 GO:GO:0002009
GO:GO:0040010 GO:GO:0018996 GO:GO:0040011 GO:GO:0040018
GO:GO:0040035 GO:GO:0007281 SUPFAM:SSF53098 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932
GO:GO:0035068 GeneTree:ENSGT00640000091312 OMA:IKLEAEY
GO:GO:0040025 EMBL:Z69661 EMBL:Z69663 RefSeq:NP_001257239.1
ProteinModelPortal:G5EES3 SMR:G5EES3 EnsemblMetazoa:F48F7.1b
GeneID:181504 KEGG:cel:CELE_F48F7.1 CTD:181504 WormBase:F48F7.1b
Uniprot:G5EES3
Length = 1023
Score = 357 (130.7 bits), Expect = 2.5e-57, Sum P(3) = 2.5e-57
Identities = 94/269 (34%), Positives = 134/269 (49%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGR-EASVNPDFGQWNMINKKMFNGGR 310
+D +FGI + +T V R+L AP L Y GR A+ P+ G W+M K+ G
Sbjct: 554 ADPFAHEFGITINPAMTEVKGRVLSAPKLLY--GGRTRATALPNQGVWDMRGKQFHTGID 611
Query: 311 VEVWTCMNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVD 367
V VW F+ D+ F +L + N GM P + Q+E
Sbjct: 612 VRVWAIACFAQQQHVKENDLRMFTNQLQRISNDAGMPIVGNPCFCKYAVGVEQVEPMFK- 670
Query: 368 VHNKTTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENV 427
+ K G +QL++++LP Y +KRV +T LGI +QC Q K+A Q N+
Sbjct: 671 -YLKQNYSG--IQLVVVVLPGKTPVYAEVKRVGDTVLGIATQCVQAKNAIRTTPQTLSNL 727
Query: 428 ALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDW 487
LK+NVK+GG N++L V+ RI + P I FG D+THP G+ PSI AVV SMD
Sbjct: 728 CLKMNVKLGGVNSILLPNVRPRI---FNEPVIFFGCDITHPPAGDSRKPSIAAVVGSMD- 783
Query: 488 PEVTKYRGLVSAQAHNEEIIQDLYKSIQD 516
++Y V Q H +EII DL +++
Sbjct: 784 AHPSRYAATVRVQQHRQEIISDLTYMVRE 812
Score = 241 (89.9 bits), Expect = 2.5e-57, Sum P(3) = 2.5e-57
Identities = 64/170 (37%), Positives = 90/170 (52%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYR-- 89
P RP G GR ++RANHF V++ I HY V + P+ +++NREIIS LI+ +
Sbjct: 160 PRRPNHGVEGRSILLRANHFAVRIPGGTIQHYQVDVTPDKCPRRVNREIISCLISAFSKY 219
Query: 90 LTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVVIR 147
TN+ P YDG +++YT PLP E +F +TL ERQF V ++
Sbjct: 220 FTNIR---PVYDGKRNMYTREPLPIGRERMDFDVTLPGDSA---------VERQFSVSLK 267
Query: 148 LASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFS 185
Q + TL+ + +Q +DV+LR PS K+T VGRSFFS
Sbjct: 268 WVGQVSLSTLEDAMEGRVRQVPFEAVQAMDVILRHLPSLKYTPVGRSFFS 317
Score = 160 (61.4 bits), Expect = 1.7e-33, Sum P(3) = 1.7e-33
Identities = 39/98 (39%), Positives = 50/98 (51%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P + + P I FG D+THP G+ PSI AVV SMD ++Y V Q H +EII DL
Sbjct: 748 PRIFNEPVIFFGCDITHPPAGDSRKPSIAAVVGSMD-AHPSRYAATVRVQQHRQEIISDL 806
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELL+ F +T KP I+ Y
Sbjct: 807 TY-------------MVRELLVQFYRNTRFKPARIVVY 831
Score = 90 (36.7 bits), Expect = 2.5e-57, Sum P(3) = 2.5e-57
Identities = 27/90 (30%), Positives = 36/90 (40%)
Query: 172 PSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMX 231
P V G + + +LG G E W G+ QS+RP+Q+ + LNI S Y M
Sbjct: 333 PQASGAVAGGAHSAGQYHAESKLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRSMP 392
Query: 232 XXXXXXXXXXX--XXXXXXRPLSDQVRLKF 259
R LSD R+KF
Sbjct: 393 VIEFIAEVLELPVQALAERRALSDAQRVKF 422
>RGD|1304583 [details] [associations]
symbol:Ago4 "argonaute RISC catalytic component 4" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006402 "mRNA catabolic process" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISO] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:1304583
GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 IPI:IPI00390206 Ensembl:ENSRNOT00000035394
Uniprot:F1LVZ1
Length = 798
Score = 331 (121.6 bits), Expect = 7.1e-56, Sum P(2) = 7.1e-56
Identities = 77/233 (33%), Positives = 114/233 (48%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLT 91
P RPG GT G+ + ANHF VQ+ K D++HYDV I PE +++NRE++ ++ +++
Sbjct: 15 PRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEKRPRRVNREVVDTMVRHFKMQ 74
Query: 92 NLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQ 151
G+R P YDG +++YTA PLP + + + V ++L +
Sbjct: 75 IFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSVQWVSVVSLQLLLE 134
Query: 152 PYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQS 207
L + +Q LDV+ R PS ++T VGRSFFS G LG G E W G+ QS
Sbjct: 135 ALAGHLSEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQS 194
Query: 208 LRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLKF 259
+RP + + LNI S Y +PL+D R+KF
Sbjct: 195 VRPAMWKMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVKF 247
Score = 314 (115.6 bits), Expect = 7.1e-56, Sum P(2) = 7.1e-56
Identities = 86/230 (37%), Positives = 116/230 (50%)
Query: 319 FSTCLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTTQPGKQ 378
F ++ ++ F +L + GM +P + +E H K T G
Sbjct: 388 FGIVVHNEMTSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKMTYVG-- 443
Query: 379 LQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINVKVGGR 438
LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN K+GG
Sbjct: 444 LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGI 503
Query: 439 NTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVS 498
N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++Y V
Sbjct: 504 NNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSRYCATVR 559
Query: 499 AQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Q +EI Q+L S Q+ + L M RELLI F ST KP II+Y
Sbjct: 560 VQTSRQEIAQELLFS-QEVVQDLT--SMARELLIQFYKSTRFKPTRIIYY 606
>UNIPROTKB|F1PGN2 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:AAEX03009640
Ensembl:ENSCAFT00000005657 Uniprot:F1PGN2
Length = 794
Score = 416 (151.5 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 112/296 (37%), Positives = 157/296 (53%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 321 EFGIVVHNEMTELTGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 378
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 379 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKM 435
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN
Sbjct: 436 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKIN 493
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 494 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 549
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y V Q +EI Q+L S Q+ + L + M+RELLI F ST KP II+Y
Sbjct: 550 YCATVRVQTSRQEISQELLYS-QEVIQDLTN--MVRELLIQFYKSTRFKPTRIIYY 602
Score = 191 (72.3 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 84 LINLYRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFR 143
++ +++ G+R P YDG +++YTA PLP + + +
Sbjct: 1 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSVQWVSV 60
Query: 144 VVIRLASQPYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIE 199
V ++L + L + +Q LDV+ R PS ++T VGRSFFS G LG G E
Sbjct: 61 VSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGRE 120
Query: 200 YWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLK 258
W G+ QS+RP + + LNI S Y +PL+D R+K
Sbjct: 121 VWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVK 180
Query: 259 F 259
F
Sbjct: 181 F 181
>UNIPROTKB|E1C5I5 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:AADN02043839 EMBL:AADN02043840
EMBL:AADN02043841 IPI:IPI00822132 Ensembl:ENSGALT00000040886
ArrayExpress:E1C5I5 Uniprot:E1C5I5
Length = 794
Score = 411 (149.7 bits), Expect = 5.5e-55, Sum P(2) = 5.5e-55
Identities = 111/296 (37%), Positives = 156/296 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 321 EFGIVVHNEMTELTGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 378
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 379 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKL 435
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN
Sbjct: 436 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKIN 493
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 494 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 549
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y V Q +E Q+L S Q+ + L + M+RELLI F ST KP II+Y
Sbjct: 550 YCATVRVQTSRQETSQELLYS-QEVIQDLTN--MVRELLIQFYKSTRFKPTRIIYY 602
Score = 190 (71.9 bits), Expect = 5.5e-55, Sum P(2) = 5.5e-55
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 84 LINLYRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFR 143
++ +++ G+R P YDG +++YTA PLP + + +
Sbjct: 1 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSIQWVSV 60
Query: 144 VVIRLASQPYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIE 199
V ++L + L + +Q LDV+ R PS ++T VGRSFFS G LG G E
Sbjct: 61 VSLQLLLEALAGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGRE 120
Query: 200 YWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLK 258
W G+ QS+RP + + LNI S Y +PL+D R+K
Sbjct: 121 VWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVK 180
Query: 259 F 259
F
Sbjct: 181 F 181
>UNIPROTKB|Q5ZMW0 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=ISS] [GO:0035278 "negative regulation
of translation involved in gene silencing by miRNA" evidence=ISS]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 HSSP:Q9UL18 GO:GO:0006402 EMBL:AJ719274
IPI:IPI00735148 RefSeq:NP_001034365.1 UniGene:Gga.42596
ProteinModelPortal:Q5ZMW0 SMR:Q5ZMW0 STRING:Q5ZMW0 GeneID:419629
KEGG:gga:419629 CTD:192670 InParanoid:Q5ZMW0 NextBio:20822659
ArrayExpress:Q5ZMW0 Uniprot:Q5ZMW0
Length = 794
Score = 411 (149.7 bits), Expect = 5.5e-55, Sum P(2) = 5.5e-55
Identities = 111/296 (37%), Positives = 156/296 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V + +T + R+LPAPML+Y GR +V P+ G W+M K+ + G ++VW
Sbjct: 321 EFGIVVHNEMTELTGRVLPAPMLQY--GGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAV 378
Query: 317 MNFST---CLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKT 372
F+ C +D++ F +L + GM +P + +E H K
Sbjct: 379 ACFAPQKQC-REDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFK--HLKL 435
Query: 373 TQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKIN 432
T G LQL+++ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKIN
Sbjct: 436 TYVG--LQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKIN 493
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG N VL V + P V +P I GADVTHP G+ PSI AVV SMD ++
Sbjct: 494 AKLGGINNVL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSR 549
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y V Q +E Q+L S Q+ + L + M+RELLI F ST KP II+Y
Sbjct: 550 YCATVRVQTSRQETSQELLYS-QEVIQDLTN--MVRELLIQFYKSTRFKPTRIIYY 602
Score = 190 (71.9 bits), Expect = 5.5e-55, Sum P(2) = 5.5e-55
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 84 LINLYRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFR 143
++ +++ G+R P YDG +++YTA PLP + + +
Sbjct: 1 MVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSIQWVSV 60
Query: 144 VVIRLASQPYVYTLQKF----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIE 199
V ++L + L + +Q LDV+ R PS ++T VGRSFFS G LG G E
Sbjct: 61 VSLQLLLEALAGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGRE 120
Query: 200 YWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXXXXXXXXRPLSDQVRLK 258
W G+ QS+RP + + LNI S Y +PL+D R+K
Sbjct: 121 VWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLTDSQRVK 180
Query: 259 F 259
F
Sbjct: 181 F 181
>WB|WBGene00000106 [details] [associations]
symbol:alg-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009790 "embryo development" evidence=IGI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0035198 "miRNA binding"
evidence=IPI] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IPI] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0035068
GeneTree:ENSGT00640000091312 EMBL:FO081675 CTD:3355106
RefSeq:NP_871992.1 ProteinModelPortal:O16720 SMR:O16720
IntAct:O16720 STRING:O16720 PaxDb:O16720 EnsemblMetazoa:T07D3.7a
GeneID:173468 KEGG:cel:CELE_T07D3.7 UCSC:T07D3.7a WormBase:T07D3.7a
InParanoid:O16720 OMA:YWACINF NextBio:879789 ArrayExpress:O16720
Uniprot:O16720
Length = 910
Score = 346 (126.9 bits), Expect = 1.5e-54, Sum P(2) = 1.5e-54
Identities = 91/269 (33%), Positives = 130/269 (48%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRV 311
+D +FGI + +T V R+L AP L Y R + P+ G W+M K+ G V
Sbjct: 438 ADPFAHEFGITINPAMTEVKGRVLSAPKLLYGGRHRATTALPNQGVWDMRGKQFHTGMEV 497
Query: 312 EVWTCMNF---STCLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDV 368
W F S D+ F +L + GM P+I + Y V+
Sbjct: 498 RTWAIACFAQQSHVKENDLRMFTTQLQRISTDAGM-----PIIGTPMFCKYASGVEQVEP 552
Query: 369 HNK-TTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENV 427
K Q +QL++++LP Y +KRV +T LGI +QC Q K+A Q N+
Sbjct: 553 MFKYLKQTYSAIQLIVVVLPGKTPIYAEVKRVGDTVLGIATQCVQAKNAIRTTPQTLSNL 612
Query: 428 ALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDW 487
LK+NVK+GG N++L V+ RI + P I G D+THP G+ PSI AVV SMD
Sbjct: 613 CLKMNVKLGGVNSILLPNVRPRI---FNEPVIFLGCDITHPAAGDTRKPSIAAVVGSMD- 668
Query: 488 PEVTKYRGLVSAQAHNEEIIQDLYKSIQD 516
++Y V Q H +EII DL +++
Sbjct: 669 AHPSRYAATVRVQQHRQEIITDLTYMVRE 697
Score = 284 (105.0 bits), Expect = 1.5e-54, Sum P(2) = 1.5e-54
Identities = 85/254 (33%), Positives = 121/254 (47%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYR-- 89
PVRP G GR ++RANHF V++ + HY + + P+ +++NRE+I LI+ +
Sbjct: 65 PVRPNHGVEGRSILLRANHFAVRIPGGSVQHYQIDVFPDKCPRRVNREVIGCLISSFSKY 124
Query: 90 LTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTERQFRVVIR 147
TN+ P YDG +++YT PLP E F +TL ER+F V ++
Sbjct: 125 FTNIR---PVYDGKRNMYTREPLPIGTEPMNFEVTLPGDSA---------VERKFSVTMK 172
Query: 148 LASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSFFSTD--LGP--- 190
Q + L + +Q +DV+LR PS K+T VGRSFF+ + P
Sbjct: 173 WIGQVCLSALDDAMEGRVRQVPHEAVQSIDVILRHLPSLKYTPVGRSFFTPPGVMKPGMQ 232
Query: 191 MGQ---LGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXX--XXX 245
M Q LG G E W G+ QS+RP+Q+ + LNI S Y M
Sbjct: 233 MHQESKLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRAMPVIEFVAEVLELPVQAL 292
Query: 246 XXXRPLSDQVRLKF 259
R LSD R+KF
Sbjct: 293 AERRALSDAQRVKF 306
Score = 152 (58.6 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 38/98 (38%), Positives = 49/98 (50%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P + + P I G D+THP G+ PSI AVV SMD ++Y V Q H +EII DL
Sbjct: 633 PRIFNEPVIFLGCDITHPAAGDTRKPSIAAVVGSMD-AHPSRYAATVRVQQHRQEIITDL 691
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELL+ F +T KP I+ Y
Sbjct: 692 TY-------------MVRELLVQFYRNTRFKPARIVVY 716
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 265 DGLTSVDARILPAPMLKYHKSGREASVNPDFGQ--WNMINKKMFNGGRVEVW 314
+ + S+D + P LKY GR P + M + GGR EVW
Sbjct: 196 EAVQSIDVILRHLPSLKYTPVGRSFFTPPGVMKPGMQMHQESKLGGGR-EVW 246
>UNIPROTKB|F1RSJ1 [details] [associations]
symbol:EIF2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IEA] [GO:0045947 "negative regulation
of translational initiation" evidence=IEA] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IEA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IEA] [GO:0035197 "siRNA binding"
evidence=IEA] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0005845
"mRNA cap binding complex" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=IEA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0045947 GO:GO:0009791 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0005844
GO:GO:0035278 GeneTree:ENSGT00640000091310 GO:GO:0035197
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:CU571011
Ensembl:ENSSSCT00000006516 OMA:VQTHRQE Uniprot:F1RSJ1
Length = 666
Score = 374 (136.7 bits), Expect = 2.5e-53, Sum P(2) = 2.5e-53
Identities = 96/263 (36%), Positives = 132/263 (50%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI V D +T V R+L P + Y GR ++ P G W+M NK+ G ++VW
Sbjct: 325 EFGIMVKDEMTDVTGRVLQPPSILY--GGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAI 382
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + F ++L + GM +P + +E H K T
Sbjct: 383 ACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 440
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+++ILP Y +KRV +T LG+ +QC Q K+ Q N+ LKINV
Sbjct: 441 YAG--LQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINV 498
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L Q R P V +P I GADVTHP G+ PSI AVV SMD +Y
Sbjct: 499 KLGGVNNIL--LPQGRPP-VFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRY 554
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q H +EIIQDL +++
Sbjct: 555 CATVRVQQHRQEIIQDLAAMVRE 577
Score = 208 (78.3 bits), Expect = 2.5e-53, Sum P(2) = 2.5e-53
Identities = 63/197 (31%), Positives = 91/197 (46%)
Query: 78 REIISQLINLYRLTNLGERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXX 135
REI+ ++ ++ G+R P +DG K++YTA PLP + E +TL
Sbjct: 1 REIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGE--------- 51
Query: 136 XGTERQFRVVIRLASQPYVYTLQ------------KFIQVLDVVLRAAPSEKHTVVGRSF 183
G +R F+V I+ S + L + IQ LDVV+R PS ++T VGRSF
Sbjct: 52 -GKDRIFKVSIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSF 110
Query: 184 FSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXX-XXXXXX 242
F+ G LG G E W G+ QS+RP+ + + LNI S Y
Sbjct: 111 FTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFK 170
Query: 243 XXXXXXRPLSDQVRLKF 259
+PL+D R+KF
Sbjct: 171 SIEEQQKPLTDSQRVKF 187
Score = 177 (67.4 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 46/98 (46%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD +Y V Q H +EIIQDL
Sbjct: 513 PPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL 571
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 572 -------------AAMVRELLIQFYKSTRFKPTRIIFY 596
>UNIPROTKB|Q5TA58 [details] [associations]
symbol:EIF2C1 "Protein argonaute-1" species:9606 "Homo
sapiens" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 UniGene:Hs.22867
HGNC:HGNC:3262 OrthoDB:EOG4229J0 ChiTaRS:EIF2C1 HOVERGEN:HBG006101
GO:GO:0003743 IPI:IPI00646765 SMR:Q5TA58 STRING:Q5TA58
Ensembl:ENST00000373206 Uniprot:Q5TA58
Length = 782
Score = 387 (141.3 bits), Expect = 3.5e-50, Sum P(2) = 3.5e-50
Identities = 96/263 (36%), Positives = 139/263 (52%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+FGI+V D +T V R+LPAP+L+Y GR ++ P+ G W+M K+ +NG ++VW
Sbjct: 319 EFGIKVKDDMTEVTGRVLPAPILQY--GGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAI 376
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+ C + + F +L + GM +P + +E H K T
Sbjct: 377 ACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 434
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 435 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINV 492
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 493 KLGGINNIL---VPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRY 548
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EII+DL +++
Sbjct: 549 CATVRVQRPRQEIIEDLSYMVRE 571
Score = 169 (64.5 bits), Expect = 3.5e-50, Sum P(2) = 3.5e-50
Identities = 54/172 (31%), Positives = 75/172 (43%)
Query: 94 GERIPAYDGMKSIYTAGPLPF--ESKEFIITLXXXXXXXXXXXXXGTER--QFRVVIR-L 148
G+R P YDG K+IYT LP E +F +T+ +R++ L
Sbjct: 11 GDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHEAL 70
Query: 149 ASQPYVYTLQKFIQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSL 208
S L+ +Q LDV +R S ++T VGRSFFS G LG G E W G+ QS+
Sbjct: 71 VSGQIPVPLES-VQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSV 129
Query: 209 RPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-RPLSDQVRLKF 259
RP + + LNI S Y +PL+D R++F
Sbjct: 130 RPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRF 181
Score = 158 (60.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 43/96 (44%), Positives = 50/96 (52%)
Query: 453 VTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYK 512
V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EII+DL
Sbjct: 509 VFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-- 565
Query: 513 SIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 566 -----------SYMVRELLIQFYKSTRFKPTRIIFY 590
>TAIR|locus:2147072 [details] [associations]
symbol:AT5G21030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00950 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006417 GO:GO:0006355 GO:GO:0006351
GO:GO:0003723 GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 ProtClustDB:PLN03202 EMBL:AC069325 IPI:IPI00541100
RefSeq:NP_197602.2 UniGene:At.54936 ProteinModelPortal:Q3E984
SMR:Q3E984 PaxDb:Q3E984 PRIDE:Q3E984 EnsemblPlants:AT5G21030.1
GeneID:832227 KEGG:ath:AT5G21030 TAIR:At5g21030 eggNOG:NOG246334
InParanoid:Q3E984 OMA:IDSNICH PhylomeDB:Q3E984
Genevestigator:Q3E984 Uniprot:Q3E984
Length = 850
Score = 348 (127.6 bits), Expect = 1.9e-46, Sum P(3) = 1.9e-46
Identities = 105/305 (34%), Positives = 150/305 (49%)
Query: 253 DQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRVE 312
D + + G+++ T V+ R+LP P LK +G+E + P G WN NK V
Sbjct: 404 DPMLQECGVRIGSDFTQVEGRVLPTPKLK---AGKEQDIYPINGSWNFKNKP----ATVT 456
Query: 313 VWTCMNFST-CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNK 371
W +NFS C Q +I R M KG+ + P + NP Q + A V
Sbjct: 457 RWAVVNFSARCDPQKIIDDLTRCGKM---KGINVDS-PYHVVFEENP-QFKDATGSV--- 508
Query: 372 TTQPGKQLQLLIIILPDVRGSY------GRIKRVCETELGIVS-QCCQPKHASSRNMQYF 424
+ K Q L IL +V + + V E + + +C P + N QY
Sbjct: 509 --RVDKMFQHLQSILGEVPPKFLLCILEKKNSDVYEKSCSMWNCECIVPPQ--NLNDQYL 564
Query: 425 ENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGE-DSSPSIVAVVA 483
N+ LKIN K+GG N+VLD + +PLV PTII G DV+H PG+ D PSI AVV+
Sbjct: 565 TNLLLKINAKLGGLNSVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQSDHIPSIAAVVS 624
Query: 484 SMDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPE 543
S +WP ++KYR V Q+ E+I L+K + D G++RELL+ F S+ +KP
Sbjct: 625 SREWPLISKYRACVRTQSPKVEMIDSLFKPVSDKD----DQGIMRELLLDFHSSSGKKPN 680
Query: 544 SIIFY 548
II +
Sbjct: 681 HIIIF 685
Score = 136 (52.9 bits), Expect = 1.9e-46, Sum P(3) = 1.9e-46
Identities = 36/101 (35%), Positives = 58/101 (57%)
Query: 31 LPV-RPGFGTRGRKCVVRANHFMVQLAKRDIH---HYDVSIDPE----VTSQKINREIIS 82
LP+ R G G++G+K ++ NHF V K + H HY V+I E + ++ R+I+
Sbjct: 23 LPMTRRGNGSKGQKILLLTNHFRVNFRKPNSHNFFHYSVTITYEDGSPLLAKGFGRKILE 82
Query: 83 QLINLYRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITL 123
++ + +LG + AYDG K++YT GPLP S +F + L
Sbjct: 83 KVQQTCQ-ADLGCKHFAYDGDKNLYTVGPLPRSSLDFSVVL 122
Score = 102 (41.0 bits), Expect = 1.9e-46, Sum P(3) = 1.9e-46
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 161 IQVLDVVL-RAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGLSLNI 219
I+V+D +L + A + +V +SFF D +G+G++ +G+ S R TQ GLSLNI
Sbjct: 176 IRVMDCILSQNAARQGCLLVRQSFFHNDAKYFANIGEGVDCCKGFHSSFRTTQGGLSLNI 235
Query: 220 GFS 222
S
Sbjct: 236 DVS 238
>UNIPROTKB|F1LZ24 [details] [associations]
symbol:Eif2c3 "Protein Eif2c3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1309163 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 IPI:IPI00388676
Ensembl:ENSRNOT00000037178 ArrayExpress:F1LZ24 Uniprot:F1LZ24
Length = 746
Score = 308 (113.5 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 82/250 (32%), Positives = 119/250 (47%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 7 VPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 66
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V ++ S
Sbjct: 67 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDVTLPGEGGKDRPFKVSVKFVS 119
Query: 151 Q---------------PYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ P L K I +DVVLR PS K+T VGRSFFS G
Sbjct: 120 RVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 179
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYNLMXXXXXXXXXXXXXXXXXX-R 249
LG G E W G+ QS+RP + + LNI S Y R
Sbjct: 180 DHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPR 239
Query: 250 PLSDQVRLKF 259
PL+D R+KF
Sbjct: 240 PLTDSHRVKF 249
Score = 230 (86.0 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 61/139 (43%), Positives = 73/139 (52%)
Query: 410 CCQPKHASSRNMQYFENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQ 469
C Q K+ + Q N+ LKINVK+GG N +L V + P V +P I GADVTHP
Sbjct: 433 CVQVKNVIKTSPQTLSNLCLKINVKLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPP 489
Query: 470 PGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRE 529
G+ PSI AVV SMD ++Y V Q +EIIQDL M+RE
Sbjct: 490 AGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDL-------------ASMVRE 535
Query: 530 LLIAFKISTNRKPESIIFY 548
LLI F ST KP IIFY
Sbjct: 536 LLIQFYKSTRFKPTRIIFY 554
Score = 57 (25.1 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 268 TSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTCMNFST 321
T + A AP + S +V P G W+M K+ G +++W F+T
Sbjct: 354 TMIKATARSAPDRQEEISRLNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFAT 408
>TAIR|locus:2197550 [details] [associations]
symbol:AGO3 "ARGONAUTE 3" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0006417
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
SUPFAM:SSF53098 HOGENOM:HOG000116043 KO:K11593 GO:GO:0031047
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:AC007654
eggNOG:NOG275416 ProtClustDB:CLSN2682370 IPI:IPI00516671
RefSeq:NP_174414.1 UniGene:At.51183 ProteinModelPortal:Q9SHF2
SMR:Q9SHF2 PaxDb:Q9SHF2 PRIDE:Q9SHF2 EnsemblPlants:AT1G31290.1
GeneID:840017 KEGG:ath:AT1G31290 TAIR:At1g31290 InParanoid:Q9SHF2
OMA:ELAMVKE PhylomeDB:Q9SHF2 Genevestigator:Q9SHF2 Uniprot:Q9SHF2
Length = 1194
Score = 320 (117.7 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 87/266 (32%), Positives = 135/266 (50%)
Query: 259 FGIQVADGLTSVDARILPAPMLKY-HKSGR--EASVNPDFGQWNMINKKMFNGGRVEVWT 315
FG++V +T+V+ R+L AP LK + G + + QWN+ K + G ++ W
Sbjct: 707 FGLRVDPNMTTVEGRVLEAPTLKLTDRRGNPIHEKLMSESNQWNLTTKGVTKGSIIKHWA 766
Query: 316 CMNF--STCLNQDVIG-FCQRLVDMCNRKGMVFNRRPVIPISS----YNPYQIEKALVDV 368
++F S L + + G F +L++ C GM V SS Y+ +E+ L V
Sbjct: 767 VLDFTASESLKKKMPGYFVNKLIERCKGLGMQMEAPIVCKTSSMETLYDGNALEELLRSV 826
Query: 369 HNKTTQP--GKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHA---SSRNMQY 423
++ + G L++ + Y +K + ET+LG+V+QC A + + QY
Sbjct: 827 IDEASHNHGGACPTLVLCAMTGKHDGYKTLKWIAETKLGLVTQCFLTISAIKGETVSDQY 886
Query: 424 FENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIF-GADVTHPQPGEDSSPSIVAVV 482
N+ALKIN KVGG N L D + ++F GADV HP ++ SPSIVAVV
Sbjct: 887 LANLALKINAKVGGTNVELVDNI---FSFFKKEDKVMFIGADVNHPAAHDNMSPSIVAVV 943
Query: 483 ASMDWPEVTKYRGLVSAQAHNEEIIQ 508
+++WPE +Y V AQ+H +E IQ
Sbjct: 944 GTLNWPEANRYAARVKAQSHRKEEIQ 969
Score = 179 (68.1 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 66/203 (32%), Positives = 96/203 (47%)
Query: 32 PV-RPGFGTRGR-KCVVR--ANHFMVQLAKRD-IHHYDVSIDPEVTSQKINR-EIISQLI 85
PV RP G + K V+ NHF V + I HYDV I E +S+KI+R E+
Sbjct: 333 PVKRPDKGGNIKVKGVINLSVNHFRVSFSTESVIRHYDVDIKGENSSKKISRFELAMVKE 392
Query: 86 NLYRLTN-LGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRV 144
L++ N + AYDG K+I++A LP S F + +Q +
Sbjct: 393 KLFKDNNDFPNAMTAYDGQKNIFSAVELPTGS--FKVDFSETEEIMRGRSYTFIIKQVKE 450
Query: 145 VIRLASQPYVYTLQKFI-----QVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIE 199
+ L Q Y+ FI Q +DVV++ PS++ VG+ FFST L G G+
Sbjct: 451 LKLLDLQAYIDGRSTFIPRDVLQGMDVVMKEHPSKRMITVGKRFFSTRLEI--DFGYGVG 508
Query: 200 YWRGYFQSLRPTQFGLSLNIGFS 222
+G+ +L+PT GLSL + S
Sbjct: 509 AAKGFHHTLKPTVQGLSLCLNSS 531
Score = 47 (21.6 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 14/65 (21%), Positives = 27/65 (41%)
Query: 315 TCMNFSTCLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDV-----H 369
T S CLN ++ F ++ + + + F R + + P + + L+ + H
Sbjct: 520 TVQGLSLCLNSSLLAF-RKAISVIEYLKLYFGWRNIRQFKNCRPDDVVQELIGLKVTVDH 578
Query: 370 NKTTQ 374
KT Q
Sbjct: 579 RKTKQ 583
Score = 39 (18.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 400 CETELGIVSQCCQPKHASSRNMQYFENVALKINVK 434
C + +V A+SR Y+E +K N K
Sbjct: 1120 CTKPVALVPPVSYADKAASRGRVYYEASLMKKNSK 1154
>TAIR|locus:2197545 [details] [associations]
symbol:AGO2 "argonaute 2" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0035197 "siRNA
binding" evidence=IDA] [GO:0051607 "defense response to virus"
evidence=IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006417 GO:GO:0006355 GO:GO:0042742 GO:GO:0006351
GO:GO:0051607 GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 EMBL:AC007654 EMBL:BT005914 EMBL:AK118463
IPI:IPI00546861 PIR:H86438 RefSeq:NP_174413.2 UniGene:At.40380
PDB:4G0M PDBsum:4G0M ProteinModelPortal:Q9SHF3 SMR:Q9SHF3
IntAct:Q9SHF3 PaxDb:Q9SHF3 PRIDE:Q9SHF3 EnsemblPlants:AT1G31280.1
GeneID:840016 KEGG:ath:AT1G31280 TAIR:At1g31280 eggNOG:NOG275416
InParanoid:Q9SHF3 OMA:DIPCLDL PhylomeDB:Q9SHF3
ProtClustDB:CLSN2682370 Genevestigator:Q9SHF3 GO:GO:0035197
Uniprot:Q9SHF3
Length = 1014
Score = 334 (122.6 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 89/271 (32%), Positives = 135/271 (49%)
Query: 250 PLSDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPD---FGQWNMINKKMF 306
P ++ FG++V +T V+ R+L AP LK + GR P+ QWN++ K +
Sbjct: 524 PSGGEIIGNFGLKVDTNMTPVEGRVLKAPSLKLAERGRVVREEPNPRQNNQWNLMKKGVT 583
Query: 307 NGGRVEVWTCMNFSTC--LNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSY-----NPY 359
G V+ W ++F+ N+ F L+D C R GM P++ +S N
Sbjct: 584 RGSIVKHWAVLDFTASERFNKMPNDFVDNLIDRCWRLGMQMEA-PIVYKTSRMETLSNGN 642
Query: 360 QIEKALVDVHNKTTQP--GKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHAS 417
IE+ L V ++ ++ G + L++ + Y +K + ET+LG+V+QC A+
Sbjct: 643 AIEELLRSVIDEASRKHGGARPTLVLCAMSRKDDGYKTLKWIAETKLGLVTQCFLTGPAT 702
Query: 418 SRNMQYFENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPS 477
QY N+ALK+N KVGG N L D + + GADV HP + SPS
Sbjct: 703 KGGDQYRANLALKMNAKVGGSNVELMDTFSF---FKKEDEVMFIGADVNHPAARDKMSPS 759
Query: 478 IVAVVASMDWPEVTKYRGLVSAQAHNEEIIQ 508
IVAVV +++WPE +Y V AQ H +E IQ
Sbjct: 760 IVAVVGTLNWPEANRYAARVIAQPHRKEEIQ 790
Score = 157 (60.3 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 54/191 (28%), Positives = 90/191 (47%)
Query: 42 RKCVVRANHFMVQLAKRD-IHHYDVSIDPEVTSQKINREIISQLINLYRLTNLGE---RI 97
R+ + NH+ V I HYDV I E+ ++K++R ++ + + N E +
Sbjct: 174 RRVNLYVNHYKVNFNPESVIRHYDVEIKGEIPTKKVSRFELAMVRDKVFTDNPDEFPLAM 233
Query: 98 PAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS-QPYVYT 156
AYDG K+I++A LP S + T +Q V ++L + Y+
Sbjct: 234 TAYDGQKNIFSAVELPTGSYKVEYPKTEEMRGRSYTF---TIKQVNV-LKLGDLKEYMTG 289
Query: 157 LQKF-----IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSLRPT 211
F +Q +DVV++ PS+ VG+SFF+ + P G+ +GY +L+PT
Sbjct: 290 RSSFNPRDVLQGMDVVMKEHPSKCMITVGKSFFTRETEPDEDFRFGVIAAKGYRHTLKPT 349
Query: 212 QFGLSLNIGFS 222
GLSL + +S
Sbjct: 350 AQGLSLCLDYS 360
>UNIPROTKB|I3L5V9 [details] [associations]
symbol:EIF2C3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0006402 "mRNA catabolic
process" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003676
SUPFAM:SSF53098 SUPFAM:SSF101690 GeneTree:ENSGT00640000091310
EMBL:FP236308 Ensembl:ENSSSCT00000030097 OMA:GITHATE Uniprot:I3L5V9
Length = 543
Score = 386 (140.9 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 97/263 (36%), Positives = 136/263 (51%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASV-NPDFGQWNMINKKMFNGGRVEVWTC 316
+F +V D + V R+LPAPML+Y GR +V P G W+M K+ G +++W
Sbjct: 178 EFQFKVRDEMAHVTGRVLPAPMLQY--GGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAI 235
Query: 317 MNFST---CLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTT 373
F+T C + + GF +L + GM +P + +E H K T
Sbjct: 236 ACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFR--HLKNT 293
Query: 374 QPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALKINV 433
G LQL+I+ILP Y +KRV +T LG+ +QC Q K+ + Q N+ LKINV
Sbjct: 294 YSG--LQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINV 351
Query: 434 KVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKY 493
K+GG N +L V + P V +P I GADVTHP G+ PSI AVV SMD ++Y
Sbjct: 352 KLGGINNIL---VPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRY 407
Query: 494 RGLVSAQAHNEEIIQDLYKSIQD 516
V Q +EIIQDL +++
Sbjct: 408 CATVRVQRPRQEIIQDLASMVRE 430
Score = 169 (64.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 45/98 (45%), Positives = 51/98 (52%)
Query: 451 PLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
P V +P I GADVTHP G+ PSI AVV SMD ++Y V Q +EIIQDL
Sbjct: 366 PSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPSRYCATVRVQRPRQEIIQDL 424
Query: 511 YKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
M+RELLI F ST KP IIFY
Sbjct: 425 -------------ASMVRELLIQFYKSTRFKPTRIIFY 449
Score = 37 (18.1 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 249 RPLSDQVRLKF 259
RPL+D R+KF
Sbjct: 30 RPLTDSHRVKF 40
>POMBASE|SPCC736.11 [details] [associations]
symbol:ago1 "argonaute" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IGI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0005724 "nuclear telomeric heterochromatin"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006808
"regulation of nitrogen utilization" evidence=IMP] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0030958 "RITS
complex" evidence=IDA] [GO:0031048 "chromatin silencing by small
RNA" evidence=IMP] [GO:0031934 "mating-type region heterochromatin"
evidence=IDA] [GO:0033167 "ARC complex" evidence=IDA] [GO:0033168
"conversion of ds siRNA to ss siRNA involved in RNA interference"
evidence=IMP] [GO:0051570 "regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0090052 "regulation of chromatin silencing at
centromere" evidence=IMP] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
PomBase:SPCC736.11 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 SUPFAM:SSF53098 GO:GO:0031048 eggNOG:NOG279895
HOGENOM:HOG000116043 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 PIR:T41568 RefSeq:NP_587782.1
ProteinModelPortal:O74957 DIP:DIP-29298N IntAct:O74957
STRING:O74957 EnsemblFungi:SPCC736.11.1 GeneID:2539403
KEGG:spo:SPCC736.11 KO:K11596 OMA:YFREKYS OrthoDB:EOG4B8NN4
NextBio:20800567 GO:GO:0033167 GO:GO:0005721 GO:GO:0031934
GO:GO:0005724 GO:GO:0030958 GO:GO:0033168 GO:GO:0090052
GO:GO:0051570 GO:GO:0006808 Uniprot:O74957
Length = 834
Score = 289 (106.8 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 81/267 (30%), Positives = 129/267 (48%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRV 311
+D ++G+++ + V AR+L P ++Y G + P G+WN+ K+ + R
Sbjct: 368 TDPYLTQYGMKIQKKMLEVPARVLETPSIRY---GGDCIERPVSGRWNLRGKRFLDPPRA 424
Query: 312 EV--WTCMNFSTCLNQDVIG---FCQRLVDMCNRKGMVF-NRRPVIPISSYNPYQIEKAL 365
+ W M F++ + G F Q V G+ F ++P + + +E+
Sbjct: 425 PIRSWAVMCFTSTRRLPMRGIENFLQTYVQTLTSLGINFVMKKPPVLYADIRG-SVEELC 483
Query: 366 VDVHNKTTQPGKQLQLLIIILPDVRGS--YGRIKRVCETELGIVSQCCQPKHASSRNMQY 423
+ ++ K Q G + + D YG IKRVC T LG+ SQC KH QY
Sbjct: 484 ITLYKKAEQVGNAPPDYLFFILDKNSPEPYGSIKRVCNTMLGVPSQCAISKHILQSKPQY 543
Query: 424 FENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVA 483
N+ +KINVKVGG N L + K PL + PT+I G DV HP G + SI ++VA
Sbjct: 544 CANLGMKINVKVGGINCSL---IPKSNPL-GNVPTLILGGDVYHPGVGA-TGVSIASIVA 598
Query: 484 SMDWPEVTKYRGLVSAQAHNEEIIQDL 510
S+D KY + +Q ++E+I+ +
Sbjct: 599 SVDL-NGCKYTAVSRSQPRHQEVIEGM 624
Score = 150 (57.9 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 49/199 (24%), Positives = 92/199 (46%)
Query: 31 LPVRPGFGTRGRKCVVRANHF-MVQLAKRDIHHYDVSIDPEVTSQKINREII--SQLINL 87
+ +RPG+G G++ ++AN F ++ L I+ Y V + + ++I S+ +
Sbjct: 9 IALRPGYGGLGKQITLKANFFQIISLPNETINQYHVIVGDGSRVPRKQSQLIWNSKEVKQ 68
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIR 147
Y ++ + YDG ++ G + + + I ++ + +
Sbjct: 69 YFGSSWMNSV--YDGRSMCWSKGDIADGTIKVNIGSESHPREIEFSIQKSSKINLHTLSQ 126
Query: 148 LASQPYVYTLQKF--IQVLDVVLRAAPSEKHTVVG--RSFFSTDLGPMGQLGDGIEYWRG 203
+ Y Q I LD++L+ PSE T+ G SFF+ + G LG G+E W+G
Sbjct: 127 FVNSKYSSDPQVLSSIMFLDLLLKKKPSE--TLFGFMHSFFTGENGV--SLGGGVEAWKG 182
Query: 204 YFQSLRPTQFGLSLNIGFS 222
++QS+RP Q +S+N+ S
Sbjct: 183 FYQSIRPNQGFMSVNVDIS 201
Score = 96 (38.9 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 33/103 (32%), Positives = 55/103 (53%)
Query: 446 VQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEE 505
+ K PL + PT+I G DV HP G + SI ++VAS+D KY + +Q ++E
Sbjct: 563 IPKSNPL-GNVPTLILGGDVYHPGVGA-TGVSIASIVASVDL-NGCKYTAVSRSQPRHQE 619
Query: 506 IIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
+I+ + K I +V+ LL F+ T ++P+ II++
Sbjct: 620 VIEGM-KDI------VVY------LLQGFRAMTKQQPQRIIYF 649
>UNIPROTKB|Q5TA56 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9606 "Homo
sapiens" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR003100 EMBL:CH471059 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 GO:GO:0003743
EMBL:AL138787 UniGene:Hs.657659 HGNC:HGNC:18421 ChiTaRS:EIF2C3
IPI:IPI00514988 SMR:Q5TA56 STRING:Q5TA56 Ensembl:ENST00000324350
Ensembl:ENST00000397828 UCSC:uc001bzn.1 HOGENOM:HOG000139684
HOVERGEN:HBG058528 Uniprot:Q5TA56
Length = 229
Score = 298 (110.0 bits), Expect = 5.7e-26, P = 5.7e-26
Identities = 74/209 (35%), Positives = 108/209 (51%)
Query: 31 LPVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRL 90
+P RPG+GT G+ + AN F V++ K D++ Y+V I P+ +++NRE++ ++ +++
Sbjct: 17 VPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKV 76
Query: 91 TNLGERIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLAS 150
T G+R P YDG +S+YTA PLP + G +R F+V I+ S
Sbjct: 77 TIFGDRRPVYDGKRSLYTANPLP-------VATTGVDLDVTLPGEGGKDRPFKVSIKFVS 129
Query: 151 Q---------------PYVYTLQKFIQV-----LDVVLRAAPSEKHTVVGRSFFSTDLGP 190
+ P L K I +DVVLR PS K+T VGRSFFS G
Sbjct: 130 RVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGY 189
Query: 191 MGQLGDGIEYWRGYFQSLRPTQFGLSLNI 219
LG G E W G+ QS+RP + + LNI
Sbjct: 190 DHPLGGGREVWFGFHQSVRPAMWKMMLNI 218
>FB|FBgn0087035 [details] [associations]
symbol:AGO2 "Argonaute 2" species:7227 "Drosophila
melanogaster" [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0030422 "production of siRNA involved in RNA interference"
evidence=IMP;IDA] [GO:0016442 "RNA-induced silencing complex"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=TAS] [GO:0016246 "RNA interference"
evidence=IDA;NAS;IMP;TAS] [GO:0048102 "autophagic cell death"
evidence=IEP] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0035197 "siRNA binding" evidence=IDA]
[GO:0035087 "siRNA loading onto RISC involved in RNA interference"
evidence=IDA;IMP] [GO:0035190 "syncytial nuclear migration"
evidence=IMP] [GO:0007349 "cellularization" evidence=IMP]
[GO:0007279 "pole cell formation" evidence=IMP] [GO:0004521
"endoribonuclease activity" evidence=IDA] [GO:0035195 "gene
silencing by miRNA" evidence=IMP] [GO:0051607 "defense response to
virus" evidence=IMP] [GO:0033227 "dsRNA transport" evidence=IMP]
[GO:0007367 "segment polarity determination" evidence=IGI]
[GO:0070578 "RISC-loading complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0045071 "negative regulation of viral
genome replication" evidence=IMP] [GO:0070868 "heterochromatin
organization involved in chromatin silencing" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0005737 GO:GO:0019048 EMBL:AE014296
GO:GO:0051607 GO:GO:0045071 SUPFAM:SSF53098 eggNOG:NOG279895
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 GO:GO:0016442 EMBL:BT003546 EMBL:BT099682
EMBL:DQ228766 EMBL:DQ228767 EMBL:DQ228768 EMBL:DQ228769
EMBL:DQ228770 EMBL:DQ228771 EMBL:DQ228772 EMBL:DQ228773
EMBL:AY094751 RefSeq:NP_648775.1 RefSeq:NP_730054.1 UniGene:Dm.9677
PDB:1R6Z PDB:1T2R PDB:1T2S PDB:1VYN PDB:3MJ0 PDBsum:1R6Z
PDBsum:1T2R PDBsum:1T2S PDBsum:1VYN PDBsum:3MJ0
ProteinModelPortal:Q9VUQ5 SMR:Q9VUQ5 DIP:DIP-41570N IntAct:Q9VUQ5
MINT:MINT-248245 STRING:Q9VUQ5 PaxDb:Q9VUQ5
EnsemblMetazoa:FBtr0075559 GeneID:39683 KEGG:dme:Dmel_CG7439
CTD:39683 FlyBase:FBgn0087035 GeneTree:ENSGT00640000091312
InParanoid:Q9VUQ5 OMA:QGRQGQE OrthoDB:EOG47D7X0
EvolutionaryTrace:Q9VUQ5 GenomeRNAi:39683 NextBio:814859
Bgee:Q9VUQ5 GermOnline:CG7439 GO:GO:0070578 GO:GO:0004521
GO:GO:0033227 GO:GO:0070868 GO:GO:0007279 GO:GO:0030422
GO:GO:0035071 GO:GO:0007367 GO:GO:0035087 GO:GO:0035190
GO:GO:0030423 Uniprot:Q9VUQ5
Length = 1214
Score = 232 (86.7 bits), Expect = 6.9e-25, Sum P(2) = 6.9e-25
Identities = 89/298 (29%), Positives = 138/298 (46%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRVEVWTC- 316
+FGI++A+ V R+L P ++YH S R V G W M K F + + C
Sbjct: 765 RFGIRIANDFIVVSTRVLSPPQVEYH-SKRFTMVKN--GSWRMDGMK-FLEPKPKAHKCA 820
Query: 317 MNFSTCLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPIS-----SYNPYQIEKALVDVHNK 371
+ + + + + Q L D N ++ ++ + IS +Y P+ ++ +D
Sbjct: 821 VLYCDPRSGRKMNYTQ-LNDFGN---LIISQGKAVNISLDSDVTYRPFTDDERSLDTIFA 876
Query: 372 TTQPGKQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKHASSR-NMQYFENVALK 430
+ Q L I+I+P R SY IK+ E + GI++QC + + N Q N+ LK
Sbjct: 877 DLKRS-QHDLAIVIIPQFRISYDTIKQKAELQHGILTQCIKQFTVERKCNNQTIGNILLK 935
Query: 431 INVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEV 490
IN K+ G N + D R+P++ + T+ GADVTHP P + PS+V V AS D P
Sbjct: 936 INSKLNGINHKIKD--DPRLPMMKN--TMYIGADVTHPSPDQREIPSVVGVAASHD-PYG 990
Query: 491 TKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPESIIFY 548
Y Q E I+D++ SI L H L +K N P+ II+Y
Sbjct: 991 ASYNMQYRLQRGALEEIEDMF-SIT-----LEH-------LRVYKEYRNAYPDHIIYY 1035
Score = 136 (52.9 bits), Expect = 6.9e-25, Sum P(2) = 6.9e-25
Identities = 57/197 (28%), Positives = 85/197 (43%)
Query: 38 GTRGRKCVVRANHFMVQLAKRD--IHHYDVSIDPEVTSQKINREIISQLINLYRLTNLGE 95
GT G+ V N+ + L+K +HYDV I PE +K R+ Q +R+ LG
Sbjct: 408 GTIGKPGQVGINYLDLDLSKMPSVAYHYDVKIMPE-RPKKFYRQAFEQ----FRVDQLGG 462
Query: 96 RIPAYDGMKSIYTAGPLPFESKEFIITLXXXXXXXXXXXXXGTERQFRVVIRLASQPYVY 155
+ AYDG S Y+ LP S+ +T+ E + + Y+
Sbjct: 463 AVLAYDGKASCYSVDKLPLNSQNPEVTVTDRNGRTLRYTIEIKETGDSTIDLKSLTTYMN 522
Query: 156 TL-----QKFIQVLDVVLRAAPSEKHTV-VGRSFFS-TDLGPMGQLGDGIEYWRGYFQS- 207
+ +Q ++VVL A+P + VGRSFF +D +L DG E G +Q+
Sbjct: 523 DRIFDKPMRAMQCVEVVL-ASPCHNKAIRVGRSFFKMSDPNNRHELDDGYEALVGLYQAF 581
Query: 208 -LRPTQFGLSLNIGFSH 223
L F LN+ SH
Sbjct: 582 MLGDRPF---LNVDISH 595
>UNIPROTKB|G4N9J3 [details] [associations]
symbol:MGG_14873 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
EMBL:CM001234 RefSeq:XP_003716704.1 ProteinModelPortal:G4N9J3
EnsemblFungi:MGG_14873T0 GeneID:12984579 KEGG:mgr:MGG_14873
Uniprot:G4N9J3
Length = 1030
Score = 236 (88.1 bits), Expect = 6.8e-24, Sum P(3) = 6.8e-24
Identities = 74/261 (28%), Positives = 123/261 (47%)
Query: 259 FGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDF-GQWNMINKKMFNGGRVEVWT-- 315
F IQV+ + + AR++P P ++Y + A VNP G+W++ K G + + +
Sbjct: 547 FKIQVSQTMETAPARVIPNPEIQY----KGAKVNPGVSGRWDLRGKVFSEAGSMPLQSFG 602
Query: 316 CMNFSTCLNQ-DVIGFCQRLVDMCNRKG--MVFNRRPVI---PISSYNPYQI-EKALVDV 368
+ C+++ F + + + G + N +PV+ +S N Q+ EKA V
Sbjct: 603 AVIIDNCVDKAGAEAFMKNFLSVFKGHGGRIAPNAKPVVLECSSASMNLGQVVEKAYQAV 662
Query: 369 HNKT-TQPGKQLQLLIIILPDVRG-SYGRIKRVCETELGIVSQCCQPKHASSRNMQYFEN 426
N P L+ ILP+ +Y RIK+ + +V+QC Q H QY N
Sbjct: 663 GNANKAHPN----LIFFILPNKSSINYERIKKSADCRYALVTQCMQAAHVRKNQAQYCSN 718
Query: 427 VALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMD 486
VA+K+N K+GG+ + A +K PT++ G DV+H PG + S+ A+ SMD
Sbjct: 719 VAMKVNAKLGGQTCKVATAFKK--------PTMMIGCDVSHAAPGAQQA-SMAAITVSMD 769
Query: 487 WPEVTKYRGLVSAQAHNEEII 507
+ +Y V + EI+
Sbjct: 770 -KDCARYAAAVETNGYRCEIL 789
Score = 87 (35.7 bits), Expect = 6.8e-24, Sum P(3) = 6.8e-24
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 161 IQVLDVVLRAAPSEKHTVVGRSFFSTDLGPMGQLGDG-IEYWRGYFQSLRPTQ------F 213
+ LD VLR PS++ + R+F+S +GDG IE +G F SLR +Q F
Sbjct: 280 LNFLDHVLREGPSQRMIPIKRNFYSKSRHAT-PMGDGVIEVLKGIFASLRMSQSINDGKF 338
Query: 214 GLSLNI 219
GL +N+
Sbjct: 339 GLGINV 344
Score = 76 (31.8 bits), Expect = 6.8e-24, Sum P(3) = 6.8e-24
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 34 RPGFGTRGRKCVVRANHFMV-QLAKRDIHHYDVSIDP 69
RPG G+ G+K ++ N+F + ++ DI+ YD+SI P
Sbjct: 142 RPGMGSLGKKINLQLNYFSILKIELPDIYLYDLSISP 178
Score = 38 (18.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 172 PSEKHTVVGRSFFSTDL 188
PS++H + G S F+ +L
Sbjct: 108 PSKEHAMSGNSNFNKNL 124
>ASPGD|ASPL0000044981 [details] [associations]
symbol:rsdA species:162425 "Emericella nidulans"
[GO:0031047 "gene silencing by RNA" evidence=IMP] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 EMBL:BN001307
GO:GO:0003676 SUPFAM:SSF53098 eggNOG:NOG279895 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AACD01000024 RefSeq:XP_659123.1
ProteinModelPortal:Q5BD61 PRIDE:Q5BD61
EnsemblFungi:CADANIAT00008147 GeneID:2874578 KEGG:ani:AN1519.2
HOGENOM:HOG000158169 OMA:TRARCYL OrthoDB:EOG4CJZRC Uniprot:Q5BD61
Length = 1019
Score = 246 (91.7 bits), Expect = 7.1e-22, Sum P(3) = 7.1e-22
Identities = 69/244 (28%), Positives = 114/244 (46%)
Query: 259 FGIQVADGLTSVDARILPAPMLKYH-KSGREASVNPDFGQWNMINKKMFNGGRVEVWTCM 317
FGIQ L +V R+L P + Y + ++ + P G WNM + + ++ W C+
Sbjct: 532 FGIQTNPNLITVPGRVLAPPTVYYKDEKSKDKEIAPMSGSWNMKSIRFSTSSNLQSWACI 591
Query: 318 NFSTCLNQ-----DVIGFC-QRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNK 371
+ Q D + C R G+ N PV + + + ++D +
Sbjct: 592 LITAGPKQHFQSPDDLEDCLYRFTKKLREVGVNANP-PVFKVRVQVTKENAETVIDAEIR 650
Query: 372 TTQPGKQLQLLIIILP-DVRGSYGRIKRVCETELGIVSQCCQPKHASSRNMQYFENVALK 430
+ +L++ ILP + Y IKR C+ G+ + + RN QYF NV LK
Sbjct: 651 KILHQHRPKLILTILPFNDTALYNCIKRACDVRHGVRNINVLAEQFCKRNEQYFANVGLK 710
Query: 431 INVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGE-DSSPSIVAVVASMD--- 486
N+K+GG N V+ + ++ ++ + T++ G DVTHP PG +PS+ A+VAS+D
Sbjct: 711 FNLKLGGVNQVVRPS---QLGIIGEGKTMLIGIDVTHPSPGSAKGAPSVAAMVASVDSSL 767
Query: 487 --WP 488
WP
Sbjct: 768 GQWP 771
Score = 70 (29.7 bits), Expect = 7.1e-22, Sum P(3) = 7.1e-22
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 32 PVRPGFGTRGRKCVVRANHFMVQLAKRDIHHYDVSID 68
P RPG+GT+G + AN+ ++ + + + Y ++ID
Sbjct: 114 PERPGYGTQGHPIQLFANYLELKSSGKSLFRYHINID 150
Score = 62 (26.9 bits), Expect = 7.1e-22, Sum P(3) = 7.1e-22
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 159 KFIQVLDVVLRAAPSEKHTV--VGRS---FFSTDLGPMGQLGDGIEYWRGYFQSLRPTQF 213
+ +Q L++VL P ++ VG + + LG G+E RGYF S+R
Sbjct: 256 EILQALNIVLGHHPKSTGSIASVGTNKHYAIHDNAAEKFDLGAGLEALRGYFVSVRAATA 315
Query: 214 GLSLNIGFSHYILY 227
L +NI + Y
Sbjct: 316 RLLVNIQVKYVACY 329
>WB|WBGene00011910 [details] [associations]
symbol:T22B3.2b species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GeneTree:ENSGT00640000091312
GO:GO:0043186 EMBL:Z68300 EMBL:Z68750 UniGene:Cel.5687
GeneID:178106 KEGG:cel:CELE_T22B3.2 CTD:178106 NextBio:899736
PIR:T23164 PIR:T23165 RefSeq:NP_502217.1 ProteinModelPortal:G5ED77
SMR:G5ED77 PRIDE:G5ED77 EnsemblMetazoa:T22B3.2b WormBase:T22B3.2b
OMA:DATQREE Uniprot:G5ED77
Length = 1035
Score = 224 (83.9 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 77/305 (25%), Positives = 136/305 (44%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREAS--VNPDFGQWNMINKKMFNGG 309
+D +FG+ V+ + AR++ P + + + R + V P G W+M ++ ++
Sbjct: 523 TDPFLKEFGVAVSSQMIETSARVIQPPPIMFGGNNRSINPVVFPKDGSWSMDHQTLYMPA 582
Query: 310 RVEVWTCMNFSTCLNQDVIG-FCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDV 368
++ + +Q + FCQ L GM F R P + + + ++
Sbjct: 583 TCRSYSMIALVDPRDQTSLQTFCQSLTMKATAMGMNFPRWPDLVKYGRSKEDVCTLFTEI 642
Query: 369 HNKTTQPGKQLQLLIIILPDVRGS-YGRIKRVCETELGIVSQCCQPKHASSRNMQYFENV 427
++ +I++L Y +K + GI+SQC K+ S N+
Sbjct: 643 ADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVSRPTPATCANI 702
Query: 428 ALKINVKVGGRNT-VLDDAVQKRIPLVTDRPTIIFGADVTHPQPGED--SSPSIVAVVAS 484
LK+N+K+GG N+ ++ D + + + D+PT++ G DVTHP E + PS+ A+VA+
Sbjct: 703 ILKLNMKMGGINSRIVADQITNKY--LVDQPTMVVGIDVTHPTQAEMRMNMPSVAAIVAN 760
Query: 485 MDW-PEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPE 543
+D P+ Y V Q E + +Y + D IRE +I F T +KP
Sbjct: 761 VDLLPQ--SYGANVKVQKKCRESV--VY--LLDA---------IRERIITFYRHTKQKPA 805
Query: 544 SIIFY 548
II Y
Sbjct: 806 RIIVY 810
Score = 77 (32.2 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 34 RPGFGTRGRKCVVRANHFMVQLA--KRDIHHYDVSIDPEVTSQKINRE----IISQLINL 87
RPG GT GRK V++N F V L K + Y V + +K++++ I + ++
Sbjct: 87 RPGLGTIGRKIPVKSNFFAVDLKNPKMVVVQYHVEVH-HPGCRKLDKDEMRIIFWKAVSD 145
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITL 123
+ + AYDG +YT L F + + L
Sbjct: 146 HPNIFHNKFALAYDGAHQLYTVARLEFPDDQGSVRL 181
Score = 54 (24.1 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 161 IQVLDVVLRAA---PSEKHTVVGRSFFS------TDLGPMGQLGDGIEYWRGYFQSLR-P 210
IQ+LD++ R + P K++ ++ S T G L G E W G+F S
Sbjct: 227 IQILDIICRQSLTCPLLKNSANFYTWKSSCYRIPTAAGQALDLEGGKEMWTGFFSSAHIA 286
Query: 211 TQFGLSLNIGFSHYILY 227
+ + LNI +H Y
Sbjct: 287 SNYRPLLNIDVAHTAFY 303
>WB|WBGene00006449 [details] [associations]
symbol:tag-76 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00950 GO:GO:0003676
GO:GO:0019915 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091312 EMBL:Z29121 EMBL:Z30215 PIR:D88568
PIR:S41013 RefSeq:NP_499191.1 RefSeq:NP_499192.1 RefSeq:NP_499193.1
ProteinModelPortal:P34681 SMR:P34681 STRING:P34681 PRIDE:P34681
EnsemblMetazoa:ZK757.3a.1 EnsemblMetazoa:ZK757.3a.2 GeneID:13190961
GeneID:176400 KEGG:cel:CELE_ZK757.3 KEGG:cel:CELE_ZK757.3a
UCSC:ZK757.3b CTD:176400 WormBase:ZK757.3a WormBase:ZK757.3b
WormBase:ZK757.3c InParanoid:P34681 OMA:ARIFCKY NextBio:892412
Uniprot:P34681
Length = 1040
Score = 229 (85.7 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 78/305 (25%), Positives = 135/305 (44%)
Query: 252 SDQVRLKFGIQVADGLTSVDARILPAPMLKYHKSGREAS--VNPDFGQWNMINKKMFNGG 309
+D +FG+ V+ + AR++ P + + + R + V P G W M N+ ++
Sbjct: 528 TDPFLKEFGVAVSSQMIQTTARVIQPPPIMFGGNNRSVNPVVFPKDGSWTMDNQTLYMPA 587
Query: 310 RVEVWTCMNFSTCLNQDVIG-FCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDV 368
++ + +Q + FCQ L GM F R P + + + ++
Sbjct: 588 TCRSYSMIALVDPRDQTSLQTFCQSLTMKATAMGMNFPRWPDLVKYGRSKEDVCTLFTEI 647
Query: 369 HNKTTQPGKQLQLLIIILPDVRGS-YGRIKRVCETELGIVSQCCQPKHASSRNMQYFENV 427
++ +I++L Y +K + GI+SQC K+ S N+
Sbjct: 648 ADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQCVLMKNVSRPTPATCANI 707
Query: 428 ALKINVKVGGRNT-VLDDAVQKRIPLVTDRPTIIFGADVTHPQPGED--SSPSIVAVVAS 484
LK+N+K+GG N+ ++ D + + + D+PT++ G DVTHP E + PS+ A+VA+
Sbjct: 708 VLKLNMKMGGINSRIVADKITNKY--LVDQPTMVVGIDVTHPTQAEMRMNMPSVAAIVAN 765
Query: 485 MDW-PEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAFKISTNRKPE 543
+D P+ Y V Q E + +Y + D IRE +I F T +KP
Sbjct: 766 VDLLPQ--SYGANVKVQKKCRESV--VY--LLDA---------IRERIITFYRHTKQKPA 810
Query: 544 SIIFY 548
II Y
Sbjct: 811 RIIVY 815
Score = 71 (30.1 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 34 RPGFGTRGRKCVVRANHFMVQLA--KRDIHHYDVSIDPEVTSQKINRE----IISQLINL 87
RPG GT GR+ V++N F + L K + Y V I +K++++ I + ++
Sbjct: 89 RPGLGTIGRQIPVKSNFFAMDLKNPKMVVIQYHVEIH-HPGCRKLDKDEMRIIFWKAVSD 147
Query: 88 YRLTNLGERIPAYDGMKSIYTAGPLPFESKEFIITL 123
+ + AYDG +YT L F + + L
Sbjct: 148 HPNIFHNKFALAYDGAHQLYTVARLEFPDDQGSVRL 183
Score = 54 (24.1 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 161 IQVLDVVLRAA---PSEKHTVVGRSFFS------TDLGPMGQLGDGIEYWRGYFQSLR-P 210
IQ+LD++ R + P K++ ++ S T G L G E W G+F S
Sbjct: 229 IQILDIICRQSLTCPLLKNSANFYTWKSSCYRIPTAAGQALDLEGGKEMWTGFFSSAHIA 288
Query: 211 TQFGLSLNIGFSHYILY 227
+ + LNI +H Y
Sbjct: 289 SNYRPLLNIDVAHTAFY 305
>ZFIN|ZDB-GENE-060526-345 [details] [associations]
symbol:piwil2 "piwi-like 2 (Drosophila)"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=ISS;IDA] [GO:0034584
"piRNA binding" evidence=IDA] [GO:0010628 "positive regulation of
gene expression" evidence=IGI] [GO:0031047 "gene silencing by RNA"
evidence=IEA;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0000966 "RNA 5'-end processing" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IEA;IMP]
[GO:0048477 "oogenesis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0034587 "piRNA
metabolic process" evidence=IDA] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010991 "negative regulation of SMAD protein complex assembly"
evidence=IPI] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950
ZFIN:ZDB-GENE-060526-345 GO:GO:0007275 GO:GO:0005634 GO:GO:0007126
GO:GO:0006417 GO:GO:0048477 GO:GO:0010628 SUPFAM:SSF53098
GO:GO:0031047 SUPFAM:SSF101690 GeneTree:ENSGT00640000091312
eggNOG:NOG286051 GO:GO:0043046 GO:GO:0030718 GO:GO:0071546
GO:GO:0034587 KO:K02156 HOGENOM:HOG000254789 HOVERGEN:HBG049411
GO:GO:0034584 EMBL:FJ168029 EMBL:EF186090 EMBL:EU817487
EMBL:CR450719 IPI:IPI00497265 RefSeq:NP_001073668.2
UniGene:Dr.40934 STRING:A2CEI6 Ensembl:ENSDART00000090695
Ensembl:ENSDART00000134274 GeneID:572134 KEGG:dre:572134 CTD:55124
InParanoid:A2CEI6 OrthoDB:EOG41ZF94 NextBio:20890847
ArrayExpress:A2CEI6 Bgee:A2CEI6 GO:GO:0010991 GO:GO:0000966
Uniprot:A2CEI6
Length = 1046
Score = 117 (46.2 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 56/255 (21%), Positives = 109/255 (42%)
Query: 258 KFGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWNMINKKMFNGGRVEVWTCM 317
++G+ ++ + R LP+ + H + S D+ + ++ + + W
Sbjct: 624 RWGLSISQEILVTQGRTLPSETICLHSASFVTSPAVDWSR-ELVRDPSISTVPLNCWAVF 682
Query: 318 NFSTCLNQDVIGFCQRLVDMCNRKGMVFNRRPVIPIS-SYNPYQIEKALVDVHNK-TTQP 375
+Q + LV +R R PI + E + +H++ T++P
Sbjct: 683 YPRRATDQ-----AEELVTTFSRVAGPMGMRVERPIRVELRDDRTETFVKSIHSQLTSEP 737
Query: 376 GKQLQLLIIILPDVRGS-YGRIKRVCETELGIVSQCCQPKHASS--RNMQYFENVALKIN 432
++QL++ I+ R Y IK++C + + SQ + S + + + L+IN
Sbjct: 738 --RVQLVVCIMTGNRDDLYSAIKKLCCIQSPVPSQAINVRTISQPQKLRSVAQKILLQIN 795
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG ++ +PL + ++ G DV H S S++ VAS++ +TK
Sbjct: 796 CKLGGELWTVN------VPL---KYLMVIGVDVHHDT--SKKSRSVMGFVASLN-SMLTK 843
Query: 493 YRGLVSAQAHNEEII 507
+ V+ Q NEEII
Sbjct: 844 WYSRVTFQMPNEEII 858
Score = 64 (27.6 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 178 VVGRSFFSTDLGPMGQLGDG-IEYWRGYFQSLRPTQFGLSLNIGFSHYILYN 228
+VGR+ + D + LG ++ W GY S++ T GL L + SH +L N
Sbjct: 411 LVGRNHY--DPNAVVILGKHRLQVWPGYSTSIKHTDGGLYLVVDVSHKVLRN 460
Score = 50 (22.7 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 29 VRLPVRPGFGTRGRKCVVRANHFMVQLAKRD-IHHYDVSIDPEVTSQKINREIISQLINL 87
V+ P++ GT+G + +N+ + K D + Y V+ P V S + ++ +
Sbjct: 283 VKEPLQK-IGTKGSPIPIGSNYIPI-CCKNDAVFQYHVTFTPNVESLSMRFGMMKE---- 336
Query: 88 YRLTNLGERIPAYDG 102
+R T GE + A+DG
Sbjct: 337 HRPTT-GE-VVAFDG 349
Score = 41 (19.5 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 27 RAVRLPVRPG-FGTRGR 42
R VRLP+ G FG RGR
Sbjct: 84 RGVRLPMEEGGFG-RGR 99
>UNIPROTKB|I3LE69 [details] [associations]
symbol:PIWIL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071546 "pi-body" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=IEA] [GO:0034584 "piRNA binding" evidence=IEA] [GO:0033391
"chromatoid body" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0030718 "germ-line stem cell maintenance"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007128 "meiotic prophase I" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0000966 "RNA 5'-end processing" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003729 GO:GO:0048477
GO:GO:0007283 SUPFAM:SSF53098 GO:GO:0031047 SUPFAM:SSF101690
GO:GO:0005844 GeneTree:ENSGT00640000091312 GO:GO:0045727
GO:GO:0043046 GO:GO:0030718 GO:GO:0071546 GO:GO:0034587
GO:GO:0033391 GO:GO:0007128 GO:GO:0034584 GO:GO:0000966 OMA:VRTIQSM
EMBL:CU468634 EMBL:CT827951 Ensembl:ENSSSCT00000027223
Uniprot:I3LE69
Length = 985
Score = 107 (42.7 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 376 GKQLQLLIIILPDVRGS-YGRIKRVCETELGIVSQCCQPKHAS--SRNMQYFENVALKIN 432
GK +Q+++ I+ R YG IK++C + + SQ + S ++ + + L+IN
Sbjct: 676 GK-IQMVVCIIMGTRDDLYGAIKKLCCVQTPVPSQVINVRTISQPTKLRSVAQKILLQIN 734
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG +D IPL + ++ G DV H P S+V VAS++ +TK
Sbjct: 735 CKLGGELWGVD------IPL---KQLMVIGIDVYH-DPSRGMR-SVVGFVASINLT-LTK 782
Query: 493 YRGLVSAQAHNEEIIQDL 510
+ V Q ++EI+ L
Sbjct: 783 WHSQVVFQMPHQEIVDSL 800
Score = 70 (29.7 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 177 TVVGRSFFSTDLGPMGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYILYN 228
T+VGR+F+ + M ++ W GY S+R T GL L SH ++ N
Sbjct: 349 TLVGRNFYDP-IRVMVLQQHRLQIWPGYAASIRRTDGGLFLLADVSHKVIRN 399
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 8/39 (20%), Positives = 18/39 (46%)
Query: 38 GTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKI 76
G++G + N +Q ++ Y V+ P V +++
Sbjct: 230 GSKGTPQYLGLNLIKIQCQNEAVYQYHVTFSPNVECKRM 268
>UNIPROTKB|A6P7L8 [details] [associations]
symbol:piwil2 "Piwi-like protein 2" species:8022
"Oncorhynchus mykiss" [GO:0000966 "RNA 5'-end processing"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007126
"meiosis" evidence=ISS] [GO:0007276 "gamete generation"
evidence=ISS] [GO:0030718 "germ-line stem cell maintenance"
evidence=ISS] [GO:0031047 "gene silencing by RNA" evidence=ISS]
[GO:0034584 "piRNA binding" evidence=ISS] [GO:0034587 "piRNA
metabolic process" evidence=ISS] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0043186 "P
granule" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0007275 GO:GO:0005634
GO:GO:0007126 GO:GO:0006417 SUPFAM:SSF53098 GO:GO:0031047
SUPFAM:SSF101690 GO:GO:0043046 GO:GO:0030718 GO:GO:0071546
GO:GO:0034587 HOVERGEN:HBG049411 GO:GO:0034584 GO:GO:0000966
EMBL:AB331649 RefSeq:NP_001117714.1 UniGene:Omy.5908
GeneID:100135857 CTD:100135857 Uniprot:A6P7L8
Length = 1054
Score = 99 (39.9 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 38/150 (25%), Positives = 75/150 (50%)
Query: 362 EKALVDVHNK-TTQPGKQLQLLIIILPDVRGS-YGRIKRVCETELGIVSQCCQPKHASS- 418
E + +H++ T++P +QL++ I+ R Y IK++C + + SQ + S
Sbjct: 731 ETYVKSIHSQLTSEPN--VQLVVCIMTGNRDDLYSAIKKLCCVQSPVPSQAINVRTISQP 788
Query: 419 -RNMQYFENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPS 477
+ + + L++N K+GG ++ +PL + ++ G DV H ++ S
Sbjct: 789 QKLRSVAQKILLQMNCKLGGELWTVN------VPL---KHLMVIGVDVHHDTSKKNRS-- 837
Query: 478 IVAVVASMDWPEVTKYRGLVSAQAHNEEII 507
++ VAS++ +T++ V+ Q NEEII
Sbjct: 838 VMGFVASLN-SLLTRWYSRVTFQMPNEEII 866
Score = 61 (26.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 38 GTRGRKCVVRANHFMVQLAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLTNLGERI 97
GT+G + +NH + ++ Y V+ P V S + ++ +R T GE +
Sbjct: 298 GTKGTPLPIGSNHITIHCRNEAVYQYHVTFTPNVESMGMRFGMMKD----HRPTT-GE-V 351
Query: 98 PAYDGMKSIYTAGPLPFESKEFI 120
A+DG +Y LP + +E +
Sbjct: 352 VAFDG-SILY----LPVKMEEVV 369
Score = 60 (26.2 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 178 VVGRSFFSTDLGPMGQLGDG-IEYWRGYFQSLRPTQFGLSLNIGFSHYILYN 228
+VGR+ + + LG ++ W GY ++ T GL L + SH +L N
Sbjct: 418 LVGRNHYDPKSAVI--LGKHRLQVWPGYSTCIKHTDGGLYLQVDVSHKVLRN 467
>WB|WBGene00004323 [details] [associations]
symbol:rde-1 species:6239 "Caenorhabditis elegans"
[GO:0006952 "defense response" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035197 "siRNA binding" evidence=IDA]
[GO:0033168 "conversion of ds siRNA to ss siRNA involved in RNA
interference" evidence=IMP] [GO:0016891 "endoribonuclease activity,
producing 5'-phosphomonoesters" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50822 SMART:SM00950 GO:GO:0009792 GO:GO:0006952
SUPFAM:SSF53098 SUPFAM:SSF101690 GO:GO:0033168 GO:GO:0035197
GeneTree:ENSGT00640000091312 GO:GO:0016891 EMBL:Z83113
EMBL:AF180730 PIR:T23510 RefSeq:NP_741611.1 UniGene:Cel.5123
ProteinModelPortal:G5EEH0 IntAct:G5EEH0 EnsemblMetazoa:K08H10.7
GeneID:179393 KEGG:cel:CELE_K08H10.7 CTD:179393 WormBase:K08H10.7
OMA:ANRSYKF NextBio:905206 Uniprot:G5EEH0
Length = 1020
Score = 133 (51.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 57/188 (30%), Positives = 86/188 (45%)
Query: 377 KQLQLLIIILPDVRGSYGRIKRVCETELGIVSQCCQPKH-----ASSRN----MQYFENV 427
+++ + III +YG +K C+ +G+ +Q + AS R+ + F +
Sbjct: 616 QKVLMFIIISKRQLNAYGFVKHYCDHTIGVANQHITSETVTKALASLRHEKGSKRIFYQI 675
Query: 428 ALKINVKVGGRNTVLD-DAVQKRIPLVTDR----P-TIIFGADVTHPQPGEDSSPSIVAV 481
ALKIN K+GG N LD + + P +R P T+ G DVTHP SI AV
Sbjct: 676 ALKINAKLGGINQELDWSEIAEISPEEKERRKTMPLTMYVGIDVTHPTSYSGIDYSIAAV 735
Query: 482 VASMDWPEVTKYRGLVSAQAHNEEIIQDLYKSIQDPQRGLVHGGMIRELLIAF-KISTNR 540
VAS++ P T YR ++ Q EE +R + +LL F + + NR
Sbjct: 736 VASIN-PGGTIYRNMIVTQ---EECRPGERAVAHGRERTDILEAKFVKLLREFAENNDNR 791
Query: 541 KPESIIFY 548
P I+ Y
Sbjct: 792 APAHIVVY 799
Score = 38 (18.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 51 FMVQLAKRDIHHYDVSIDPEVTSQK 75
F ++ R+ + Y+V + EV ++K
Sbjct: 49 FSSKIYDREYYEYEVKMTKEVLNRK 73
>UNIPROTKB|E1B838 [details] [associations]
symbol:E1B838 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098
SUPFAM:SSF101690 GeneTree:ENSGT00640000091312 OMA:SVIVYRD
EMBL:DAAA02045501 IPI:IPI00708370 Ensembl:ENSBTAT00000020633
Uniprot:E1B838
Length = 875
Score = 83 (34.3 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 41/168 (24%), Positives = 73/168 (43%)
Query: 349 PVIPISSYNPYQIEKA-LVDVHNKTTQP--GKQLQLLIIILP-DVRGSYGRIKRVCETEL 404
P + I+ N +E A V + +T + ++ Q+++ +LP D + Y IKR
Sbjct: 537 PKMGITVRNAKLLEAADTVQSYIRTLEKHASQKTQMVLCLLPTDNKEIYDGIKRYLCINY 596
Query: 405 GIVSQCCQPKHASSRN--MQYFENVALKINVKVGGRNTVLDDAVQKRIPLVTDRPTIIFG 462
I SQC + + +AL++N K+GG +D +Q + G
Sbjct: 597 PIPSQCVLKRTLDRPKTPVTIATKIALQMNCKLGGALWKVDIGLQN---------AMFIG 647
Query: 463 ADVTHPQPGEDSSPSIVAVVASMDWPEVTKYRGLVSAQAHNEEIIQDL 510
D H E S+ VAS+D P++T++ Q +E+++ L
Sbjct: 648 IDCFHDI--ERRRKSVAGFVASID-PDLTRWFSQCIIQESGQELVKGL 692
Score = 66 (28.3 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 38 GTRGRKCVVRANHFMVQ-LAKRDIHHYDVSIDPEVTSQKINREIISQLINLYRLTNLGER 96
GT+G ++ +NH ++ ++R ++ Y+V P++ + ++S+L L LG R
Sbjct: 124 GTQGSPVMLFSNHVRLKSCSQRHLYKYNVIYTPDIEDGRKREALLSELEKL-----LGNR 178
Query: 97 IPAYDGMKSIYTAGPLPFESKEFIITL 123
YDG S+ L KE + L
Sbjct: 179 C-IYDG-NSLLLPHSLGETKKEVVSKL 203
Score = 63 (27.2 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 179 VGRSFFSTDLGP-MGQLGDGIEYWRGYFQSLRPTQFGLSLNIGFSHYIL 226
+GR++++ + + +E W GY S+ P + GL+L SH +L
Sbjct: 245 IGRNYYNKNKKTEFNEYRRWLEIWPGYVTSILPYETGLTLCADVSHKLL 293
>ZFIN|ZDB-GENE-030813-2 [details] [associations]
symbol:piwil1 "piwi-like 1 (Drosophila)" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IDA;IMP] [GO:0034584
"piRNA binding" evidence=IDA] [GO:0034587 "piRNA metabolic process"
evidence=IDA;IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0031047 "gene silencing by RNA"
evidence=IEA;IMP] [GO:0009653 "anatomical structure morphogenesis"
evidence=IDA] [GO:0006417 "regulation of translation"
evidence=IEA;ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 ZFIN:ZDB-GENE-030813-2
GO:GO:0007275 GO:GO:0007126 GO:GO:0006417 GO:GO:0007281
SUPFAM:SSF53098 GO:GO:0031047 SUPFAM:SSF101690
GeneTree:ENSGT00640000091312 eggNOG:NOG286051 GO:GO:0009653
GO:GO:0034587 GO:GO:0043186 KO:K02156 CTD:9271 HOGENOM:HOG000254789
HOVERGEN:HBG049411 OrthoDB:EOG47SSD7 GO:GO:0034584 EMBL:AF336369
EMBL:BC049495 IPI:IPI00483910 IPI:IPI00501372 RefSeq:NP_899181.1
UniGene:Dr.83448 ProteinModelPortal:Q8UVX0 STRING:Q8UVX0
PRIDE:Q8UVX0 Ensembl:ENSDART00000061115 Ensembl:ENSDART00000138019
Ensembl:ENSDART00000145076 GeneID:368200 KEGG:dre:368200
InParanoid:Q8UVX0 OMA:PGYIQPR NextBio:20812803 ArrayExpress:Q8UVX0
Bgee:Q8UVX0 Uniprot:Q8UVX0
Length = 858
Score = 120 (47.3 bits), Expect = 0.0010, P = 0.0010
Identities = 68/284 (23%), Positives = 119/284 (41%)
Query: 259 FGIQVADGLTSVDARILPAPMLKYHKSGREASVNPDFGQWN--MINKKMFNGGRVEVWTC 316
+G+ + L S++ R+LP+ + + GR NP W+ M + + ++ W
Sbjct: 438 WGLSFENKLLSLNGRVLPSERII--QGGRAFEYNPWTADWSKEMRGLPLISCMSLDNW-- 493
Query: 317 MNFSTCLNQDVI-GFCQRLVDMCNRKGMVFNRRPVIPISSYNPYQIEKALVDVHNKTTQP 375
+ F T N DV Q L + G+ R +I Y Q E L +
Sbjct: 494 LMFYTRRNADVAQSLLQTLNKVSGPMGIRMQRAVMI---EYEDRQ-ESLLRALQQNVA-- 547
Query: 376 GKQLQLLIIILPDVR-GSYGRIKRVCETELGIVSQCCQPKHASSRN--MQYFENVALKIN 432
++ Q++++ILP R Y +K+ + SQC + S M +AL++N
Sbjct: 548 -RETQMVVVILPTNRKDKYDCVKKYLCVDCPTPSQCVVSRTISKPQALMTVATKIALQMN 606
Query: 433 VKVGGRNTVLDDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSIVAVVASMDWPEVTK 492
K+GG ++ IPL R +I G D H SI A+VAS++ +++
Sbjct: 607 CKMGGELWSVE------IPL---RQLMIVGIDCYHDTAA--GKRSIGAMVASLN-QGMSR 654
Query: 493 YRGLVSAQAHNEEIIQDLYKSIQDPQRG-LVHGGMIRELLIAFK 535
+ Q +EII L S+Q + L + + +I ++
Sbjct: 655 WFSKCVLQNRGQEIIDALKGSLQGALKAYLKYNNSLPSRIIVYR 698
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 548 501 0.00085 119 3 11 22 0.36 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 71
No. of states in DFA: 617 (66 KB)
Total size of DFA: 288 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 35.14u 0.11s 35.25t Elapsed: 00:00:01
Total cpu time: 35.16u 0.11s 35.27t Elapsed: 00:00:02
Start: Fri May 10 04:04:18 2013 End: Fri May 10 04:04:20 2013