Your job contains 1 sequence.
>035699
MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETRA
FAQEIFARVPRKESESKTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGIA
SVEEERRVVRRRIPREEEDDGSDSEEERLRDQRGKEELERRIRERDVAATRKLTGPKLTW
KEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAEL
CELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIV
DFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTT
QIPQYLYEAGYTKQGKIGCTQLRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSDKT
VLKYMTDGMLLREIVLEPSLESYSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIF
KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQ
RTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVI
DPGFAKVKSYNPKTGMESLLVNPISKASANQRT
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035699
(633 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 737 1.5e-174 4
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 771 2.5e-134 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 637 5.7e-127 3
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 637 5.7e-127 3
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 667 4.4e-122 3
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 664 2.0e-121 3
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 665 9.1e-121 3
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 664 1.5e-120 3
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 637 2.4e-115 3
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 700 2.7e-114 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 663 3.4e-113 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 662 2.3e-112 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 682 7.9e-112 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 664 1.0e-111 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 647 6.4e-109 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 640 6.0e-107 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 592 4.7e-102 4
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 596 2.9e-100 4
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 596 7.4e-98 3
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 596 9.9e-98 3
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 596 1.5e-97 3
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 602 1.8e-97 3
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 589 2.4e-97 3
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 596 2.4e-97 3
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 596 2.8e-97 3
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 596 3.0e-97 3
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 596 5.1e-97 3
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 590 1.4e-96 3
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 596 1.9e-96 3
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 602 7.0e-95 3
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 602 7.0e-95 3
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 595 1.1e-94 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 596 1.4e-94 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 553 1.5e-92 3
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 553 1.5e-92 3
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 603 5.2e-91 2
UNIPROTKB|B0V0F8 - symbol:DHX16 "Putative pre-mRNA-splici... 479 6.2e-91 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 587 2.2e-89 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 559 6.5e-89 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 507 2.7e-88 4
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 507 2.7e-88 4
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 515 1.9e-86 3
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 495 5.1e-86 4
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 507 7.4e-86 3
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 492 1.1e-85 4
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 549 1.3e-84 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 497 2.0e-84 3
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 495 4.2e-84 3
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 503 1.6e-83 3
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 497 3.4e-83 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 474 6.7e-83 3
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 536 1.7e-82 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 491 6.3e-81 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 446 6.3e-79 3
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 482 1.6e-78 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 497 1.9e-78 3
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 477 7.6e-78 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 492 8.6e-78 3
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 478 1.0e-77 2
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 494 1.2e-77 3
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 494 2.0e-77 3
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 494 2.0e-77 3
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 494 2.5e-77 3
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 494 2.5e-77 3
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 494 2.5e-77 3
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 493 2.8e-77 3
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 469 7.5e-75 2
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 429 9.3e-75 3
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 429 9.6e-75 3
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 489 1.2e-74 2
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 457 4.2e-72 3
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 475 1.2e-71 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 464 1.5e-71 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 464 1.5e-71 2
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 447 9.7e-71 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 445 1.2e-70 2
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 324 1.1e-68 4
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 324 1.1e-68 4
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 426 4.4e-68 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 424 3.2e-67 2
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 424 3.4e-67 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 424 4.4e-67 2
ZFIN|ZDB-GENE-080507-1 - symbol:dhx40 "DEAH (Asp-Glu-Ala-... 389 4.5e-67 2
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 430 6.2e-67 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 423 7.9e-67 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 417 1.1e-66 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 419 2.1e-66 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 419 3.0e-66 2
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 414 4.4e-66 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 414 6.4e-66 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 431 1.6e-65 2
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 420 4.4e-65 2
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 662 5.2e-65 1
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 662 5.2e-65 1
UNIPROTKB|I3LU50 - symbol:I3LU50 "Uncharacterized protein... 497 1.8e-64 2
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 408 8.7e-64 2
UNIPROTKB|F1NWM3 - symbol:DHX40 "Uncharacterized protein"... 382 3.5e-62 2
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 396 3.7e-60 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 588 4.5e-60 2
MGI|MGI:1914737 - symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) bo... 377 1.3e-59 2
WARNING: Descriptions of 208 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 737 (264.5 bits), Expect = 1.5e-174, Sum P(4) = 1.5e-174
Identities = 141/191 (73%), Positives = 163/191 (85%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ RPDLKLLISSAT+DAE FSD+F APIF+ P RRY V++ +T APEADY+
Sbjct: 537 FGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYM 596
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+AAI T L IHV EP+GD+LVFL GQ++ E EE LK + RGLGTKI ELIICPIY NLP
Sbjct: 597 DAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLP 656
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV+DPGF+K+KSYNP+TGMESLLV
Sbjct: 657 SELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVT 716
Query: 623 PISKASANQRT 633
PISKASA QRT
Sbjct: 717 PISKASATQRT 727
Score = 532 (192.3 bits), Expect = 1.5e-174, Sum P(4) = 1.5e-174
Identities = 115/194 (59%), Positives = 140/194 (72%)
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESV--------ELPDK----S 313
+ Q + A LK+G+KNK+ D+Y++VFE D+I DF + SV E+ K S
Sbjct: 333 EDHQIENAALKFGAKNKEVS-DNYEFVFE--DQI-DFIKASVLAGDNYEDEMHAKPSQDS 388
Query: 314 AVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTK 373
A KSA MLQE+RK LPIY +R++LL AV ++ VL+IVGETGSGKTTQIPQYL+EAGYTK
Sbjct: 389 AGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTK 448
Query: 374 QGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE 433
GK+GCTQ QEMG KLGHEVGYSIRFEDCTS+KT+LKYMTDGMLLRE
Sbjct: 449 LGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRE 508
Query: 434 IVLEPSLESYSVLI 447
++ EP L SYSV+I
Sbjct: 509 LLGEPDLGSYSVII 522
Score = 285 (105.4 bits), Expect = 1.5e-174, Sum P(4) = 1.5e-174
Identities = 75/188 (39%), Positives = 111/188 (59%)
Query: 75 ESKTNTILDAAHYDADDDVIRITAS-TNK-----KRFRKRIGS-EDDDDEGIASXXXXXX 127
+ KT ++L+A H + +++V + +AS T K KRFRK+ EDDDDE +
Sbjct: 91 KQKTFSLLEADHDEDENNVKKQSASKTGKSDKGQKRFRKKSEQLEDDDDEVVI--VREDK 148
Query: 128 XXXXXXXXXXXXXXXXXXXXRLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAI 187
RLRDQR +EELE+ +RERD A TRKLT PK++ KE+ + +
Sbjct: 149 RNVRRKVSEDEDDGTESEEERLRDQREREELEQHLRERDTARTRKLTEPKMSKKEQEEFV 208
Query: 188 QR-SRKDDG-IENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDY 245
+R S D G IE+LR+ S Q+Y+ KR QKK+ E+KD +D+ LF +KLT E+ E Y
Sbjct: 209 RRDSAVDKGDIESLRKFSWQEYMKKRKQKKVLELKDDIEDEPYLFGDEKLTEREIREFRY 268
Query: 246 EKKILDLV 253
+++I +L+
Sbjct: 269 KREIYELI 276
Score = 196 (74.1 bits), Expect = 1.5e-174, Sum P(4) = 1.5e-174
Identities = 42/72 (58%), Positives = 54/72 (75%)
Query: 1 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETRA 60
M S D L TWVSDKL+ LLG+SQ AVVQY+I ++KQ+ S +L +L E FS + +TRA
Sbjct: 1 MGSND-LNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVRELVECGFSLSGDTRA 59
Query: 61 FAQEIFARVPRK 72
FA+EI+AR PRK
Sbjct: 60 FAEEIYARAPRK 71
Score = 65 (27.9 bits), Expect = 1.3e-77, Sum P(2) = 1.3e-77
Identities = 41/165 (24%), Positives = 69/165 (41%)
Query: 186 AIQRSRKDDGIENLREVSRQKY-LPKRAQKKLEEIKDRTKDKE---NLFEGQKLTGAELC 241
A+ + K G E +RE+ + L + EEI R K NL++ Q+ A L
Sbjct: 31 AMAKQSKSPG-ELVRELVECGFSLSGDTRAFAEEIYARAPRKTPGVNLYQQQEAEAAMLL 89
Query: 242 ELDYEKKILDLVGQEGLQRCSHESDKQQRK--KADLKYGSKNKKQQYDDYQYVFEIEDKI 299
+ +L+ E +S + K K ++ K+++ + DD + V EDK
Sbjct: 90 KKQKTFSLLEADHDEDENNVKKQSASKTGKSDKGQKRFRKKSEQLEDDDDEVVIVREDK- 148
Query: 300 VDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSE 344
R V + +S E L+++R+ REEL Q + E
Sbjct: 149 -RNVRRKVSEDEDDGTESEEERLRDQRE-------REELEQHLRE 185
Score = 39 (18.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 205 QKYLPKRAQKKLEEIKDRTKDKENLFEGQKL-TGAELCELDYEKK 248
+ Y+ R+ K+ +I+D+ E L E ++ + ELD +K
Sbjct: 905 ENYIQVRSMKRARDIRDQL---EGLLERVEIDVSSNANELDSIRK 946
Score = 37 (18.1 bits), Expect = 1.3e-97, Sum P(4) = 1.3e-97
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 432 REIVLEPSLESYSVLIDLINYRPD 455
R++VL ++ S+ ID I Y D
Sbjct: 672 RKVVLATNIAETSLTIDGIKYVVD 695
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 771 (276.5 bits), Expect = 2.5e-134, Sum P(2) = 2.5e-134
Identities = 148/190 (77%), Positives = 167/190 (87%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RPDLKLLISSAT+DAE FSDYF +APIF P RRY VE+ YT APEADY+
Sbjct: 537 FGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYM 596
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+AAIVT L IHV EP+GDILVF TGQ++ ETAEEILK R RGLGTKI ELIICPIY NLP
Sbjct: 597 DAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLP 656
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV+DPGF+K+KSYNP+TGMESLL+
Sbjct: 657 SELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLIT 716
Query: 623 PISKASANQR 632
PISKASA QR
Sbjct: 717 PISKASATQR 726
Score = 566 (204.3 bits), Expect = 2.5e-134, Sum P(2) = 2.5e-134
Identities = 144/314 (45%), Positives = 195/314 (62%)
Query: 150 RDQRGKEELERRIR-ERDVAATRKLTGPKLT---WKEE-YDAIQ-RSRKDDGIENLREVS 203
R+Q+ +EL I E+ + KLT +L +K+E YD ++ R++ +D +E R
Sbjct: 233 REQKKLDELRDEIEDEQYLFGGEKLTETELREFRYKKELYDLVKKRTQDEDNVEEYR--- 289
Query: 204 RQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSH 263
+P + + D+E F + +LD +K+ QE + H
Sbjct: 290 ----IPDAYDQ------EGGVDQEKRFS---VAVQRYRDLDSTEKMNPFAEQEAWE--DH 334
Query: 264 ESDKQQRKKADLKYGSKNKKQQYDDYQYVFE-----IEDKIV--DFFRESVELPDKS--- 313
Q KA LK+G+KNK Q DDYQ+VFE I++ ++ + + ++++ KS
Sbjct: 335 -----QIGKATLKFGAKNK-QASDDYQFVFEDQINFIKESVMAGENYEDAMDAKQKSQDL 388
Query: 314 AVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTK 373
A K+ALE LQE R++LPIY +R++LL+AV E+ VLVIVG+TGSGKTTQIPQYL+EAGYTK
Sbjct: 389 AEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTK 448
Query: 374 QGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE 433
+GK+GCTQ QEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE
Sbjct: 449 RGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE 508
Query: 434 IVLEPSLESYSVLI 447
++ EP L SYSV+I
Sbjct: 509 LLGEPDLASYSVVI 522
Score = 233 (87.1 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 86/349 (24%), Positives = 167/349 (47%)
Query: 1 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETRA 60
M S D LKTWVSDKL+ LLGYSQ AVV Y+I ++K+ S +L +L ++ FSS+ +TR+
Sbjct: 1 MASND-LKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGELVDYGFSSSGDTRS 59
Query: 61 FAQEIFARVPRKESESKTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGI- 119
FA+EIFARVPRK + N L H +A+ ++ K++ + ++DD+DE +
Sbjct: 60 FAEEIFARVPRKTAG--VN--LYQKH-EAEAAML-----VRKQKTYALLDADDDEDEVVV 109
Query: 120 ---ASXXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQRGKEELERRIRERDVAATRKLTGP 176
+S + + + R++ E D + +
Sbjct: 110 EKKSSVSESRKSDKGKKRFRKKSGQSDESDGEVAVREDSRHVRRKVSEEDDGSESE--EE 167
Query: 177 KLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLT 236
++ ++E + +++ KD R+++ Q K ++ + + +K++L+ +K++
Sbjct: 168 RVRDQKEREELEQHLKDRDTARTRKLTEQTLSKKEKEEAVR--RANALEKDDLYSLRKVS 225
Query: 237 GAELCELDYEKKILDL---VGQE----GLQRCSHESDKQQRKKADLKYGSKNKKQQYDDY 289
E + +KK+ +L + E G ++ + ++ R K +L Y K+ Q +D
Sbjct: 226 RQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTETELREFRYKKEL-YDLVKKRTQDED- 283
Query: 290 QYVFEIED-KIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREE 337
+E+ +I D + + + + A++ ++ T + PF E+
Sbjct: 284 ----NVEEYRIPDAYDQEGGVDQEKRFSVAVQRYRDLDSTEKMNPFAEQ 328
Score = 37 (18.1 bits), Expect = 4.6e-55, Sum P(2) = 4.6e-55
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 432 REIVLEPSLESYSVLIDLINYRPD 455
R++VL ++ S+ ID I Y D
Sbjct: 672 RKVVLATNIAETSLTIDGIKYVVD 695
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 637 (229.3 bits), Expect = 5.7e-127, Sum P(3) = 5.7e-127
Identities = 122/191 (63%), Positives = 159/191 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +R DLKLLISSATLDAE FS +F APIF+IP RR+ V+++YT+APEADY+
Sbjct: 498 FGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYV 557
Query: 503 EAAIVTALQIHVNEPI-GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNL 561
+AAIVT +QIH+ +P+ GDILVFLTGQ++ ET +E L +R++ LG+KI ELI P+Y NL
Sbjct: 558 DAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANL 617
Query: 562 PTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLV 621
P++LQAKIFEPTP+ ARKVVLATNIAETS+TIDGI YVIDPGF+K S++ ++G+E L V
Sbjct: 618 PSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHV 677
Query: 622 NPISKASANQR 632
ISKA+ANQR
Sbjct: 678 VTISKAAANQR 688
Score = 433 (157.5 bits), Expect = 5.7e-127, Sum P(3) = 5.7e-127
Identities = 90/189 (47%), Positives = 130/189 (68%)
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELP--DKSAVKSALEM-- 321
+++Q + L G+K+ K++ +++ + D+ VDF +++++P ++ V++ E
Sbjct: 299 EEEQLMASMLHLGAKDAKRKEQEFELLL---DEKVDFI-QALQMPGTNEEVVETEAEKKK 354
Query: 322 --LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IG 378
++E RK+LP+Y FR+ ++AV E+ VL+I GETGSGKTTQ+PQYLYEAG+ + GK IG
Sbjct: 355 MSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIG 414
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEP 438
CTQ E+G KLG +VGYSIRFEDCTS+KTVLKYMTDGMLLRE + EP
Sbjct: 415 CTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEP 474
Query: 439 SLESYSVLI 447
L SYSV++
Sbjct: 475 DLASYSVMM 483
Score = 230 (86.0 bits), Expect = 5.7e-127, Sum P(3) = 5.7e-127
Identities = 66/262 (25%), Positives = 127/262 (48%)
Query: 6 NLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEF-EFSSTTETRAFAQE 64
+++ +++D+L S++G S ++ QYV L+K+A S+ DL KL++ +F + ++FA +
Sbjct: 2 SVEQFINDQLHSIVGISDRSICQYVHALAKKAKSAPDLVEKLRDAGDFPISPAIQSFADQ 61
Query: 65 IFARVPRKESESKTN--TILDAAHYDAD--DDVIRI-----TASTNKKRFRKRIGSEDDD 115
+ +R+PR+ + ++ T + A + + + + + +ST K RKR S +D
Sbjct: 62 LMSRMPRQATSARQRGPTTAELAEQELNRLNRAVGVLEDYSASSTKTKNVRKRKESSSED 121
Query: 116 DEGIASXXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQRGKEELERRIRERDVAATRKLTG 175
DE D ++ L RI +++ TR +
Sbjct: 122 DEAPIKASKPGKSVKPSKSDDSESDIEAMEAKLDADIAERDALAARINKKEKDKTRNVME 181
Query: 176 PKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKL 235
K +++ + ++ ++ LRE SR++YL KR KLEE++ D + LF +KL
Sbjct: 182 KK---RDD----NKDKEGSSMDKLREESRRQYLKKRKVDKLEELEAIVHDDQTLFAREKL 234
Query: 236 TGAELCELDYEKKILDLVGQEG 257
T E +++Y KK+L+ G
Sbjct: 235 TKREKADMEYRKKVLEYTKAHG 256
Score = 45 (20.9 bits), Expect = 6.9e-61, Sum P(3) = 6.9e-61
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 432 REIVLEPSLESYSVLIDLINY 452
R++VL ++ SV ID INY
Sbjct: 634 RKVVLATNIAETSVTIDGINY 654
Score = 44 (20.5 bits), Expect = 2.1e-107, Sum P(3) = 2.1e-107
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 35 KQALSSADLETKLQEFEFSSTTETRAFAQEIFARVPRKESESKTNTI-LDAAHYDADDDV 93
+Q L ++ KL+E E + FA+E + + + E + + AH A D V
Sbjct: 204 RQYLKKRKVD-KLEELEAIVHDDQTLFAREKLTKREKADMEYRKKVLEYTKAHGKAGD-V 261
Query: 94 IRITASTNKKRFRKRIGSE--DDDDE 117
+++ K+I S+ +DD+E
Sbjct: 262 MKMKRYHLPDASTKQIPSQYVEDDEE 287
Score = 42 (19.8 bits), Expect = 3.5e-107, Sum P(3) = 3.5e-107
Identities = 30/144 (20%), Positives = 60/144 (41%)
Query: 148 RLRDQRGKEELERRIRERDVAATR--KLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQ 205
+ ++ R ++E E + A++ K P + E D K D R+
Sbjct: 107 KTKNVRKRKESSSEDDEAPIKASKPGKSVKPSKSDDSESDIEAMEAKLDADIAERDALAA 166
Query: 206 KYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGA-ELCELDY-EKKILDLVGQEGLQRCSH 263
+ + K+ + K + ++ +D EG + E Y +K+ +D + E L+ H
Sbjct: 167 R-INKKEKDKTRNVMEKKRDDNKDKEGSSMDKLREESRRQYLKKRKVDKL--EELEAIVH 223
Query: 264 ES------DK-QQRKKADLKYGSK 280
+ +K +R+KAD++Y K
Sbjct: 224 DDQTLFAREKLTKREKADMEYRKK 247
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 637 (229.3 bits), Expect = 5.7e-127, Sum P(3) = 5.7e-127
Identities = 122/191 (63%), Positives = 159/191 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +R DLKLLISSATLDAE FS +F APIF+IP RR+ V+++YT+APEADY+
Sbjct: 498 FGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYV 557
Query: 503 EAAIVTALQIHVNEPI-GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNL 561
+AAIVT +QIH+ +P+ GDILVFLTGQ++ ET +E L +R++ LG+KI ELI P+Y NL
Sbjct: 558 DAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANL 617
Query: 562 PTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLV 621
P++LQAKIFEPTP+ ARKVVLATNIAETS+TIDGI YVIDPGF+K S++ ++G+E L V
Sbjct: 618 PSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHV 677
Query: 622 NPISKASANQR 632
ISKA+ANQR
Sbjct: 678 VTISKAAANQR 688
Score = 433 (157.5 bits), Expect = 5.7e-127, Sum P(3) = 5.7e-127
Identities = 90/189 (47%), Positives = 130/189 (68%)
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELP--DKSAVKSALEM-- 321
+++Q + L G+K+ K++ +++ + D+ VDF +++++P ++ V++ E
Sbjct: 299 EEEQLMASMLHLGAKDAKRKEQEFELLL---DEKVDFI-QALQMPGTNEEVVETEAEKKK 354
Query: 322 --LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IG 378
++E RK+LP+Y FR+ ++AV E+ VL+I GETGSGKTTQ+PQYLYEAG+ + GK IG
Sbjct: 355 MSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIG 414
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEP 438
CTQ E+G KLG +VGYSIRFEDCTS+KTVLKYMTDGMLLRE + EP
Sbjct: 415 CTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEP 474
Query: 439 SLESYSVLI 447
L SYSV++
Sbjct: 475 DLASYSVMM 483
Score = 230 (86.0 bits), Expect = 5.7e-127, Sum P(3) = 5.7e-127
Identities = 66/262 (25%), Positives = 127/262 (48%)
Query: 6 NLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEF-EFSSTTETRAFAQE 64
+++ +++D+L S++G S ++ QYV L+K+A S+ DL KL++ +F + ++FA +
Sbjct: 2 SVEQFINDQLHSIVGISDRSICQYVHALAKKAKSAPDLVEKLRDAGDFPISPAIQSFADQ 61
Query: 65 IFARVPRKESESKTN--TILDAAHYDAD--DDVIRI-----TASTNKKRFRKRIGSEDDD 115
+ +R+PR+ + ++ T + A + + + + + +ST K RKR S +D
Sbjct: 62 LMSRMPRQATSARQRGPTTAELAEQELNRLNRAVGVLEDYSASSTKTKNVRKRKESSSED 121
Query: 116 DEGIASXXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQRGKEELERRIRERDVAATRKLTG 175
DE D ++ L RI +++ TR +
Sbjct: 122 DEAPIKASKPGKSVKPSKSDDSESDIEAMEAKLDADIAERDALAARINKKEKDKTRNVME 181
Query: 176 PKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKL 235
K +++ + ++ ++ LRE SR++YL KR KLEE++ D + LF +KL
Sbjct: 182 KK---RDD----NKDKEGSSMDKLREESRRQYLKKRKVDKLEELEAIVHDDQTLFAREKL 234
Query: 236 TGAELCELDYEKKILDLVGQEG 257
T E +++Y KK+L+ G
Sbjct: 235 TKREKADMEYRKKVLEYTKAHG 256
Score = 45 (20.9 bits), Expect = 6.9e-61, Sum P(3) = 6.9e-61
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 432 REIVLEPSLESYSVLIDLINY 452
R++VL ++ SV ID INY
Sbjct: 634 RKVVLATNIAETSVTIDGINY 654
Score = 44 (20.5 bits), Expect = 2.1e-107, Sum P(3) = 2.1e-107
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 35 KQALSSADLETKLQEFEFSSTTETRAFAQEIFARVPRKESESKTNTI-LDAAHYDADDDV 93
+Q L ++ KL+E E + FA+E + + + E + + AH A D V
Sbjct: 204 RQYLKKRKVD-KLEELEAIVHDDQTLFAREKLTKREKADMEYRKKVLEYTKAHGKAGD-V 261
Query: 94 IRITASTNKKRFRKRIGSE--DDDDE 117
+++ K+I S+ +DD+E
Sbjct: 262 MKMKRYHLPDASTKQIPSQYVEDDEE 287
Score = 42 (19.8 bits), Expect = 3.5e-107, Sum P(3) = 3.5e-107
Identities = 30/144 (20%), Positives = 60/144 (41%)
Query: 148 RLRDQRGKEELERRIRERDVAATR--KLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQ 205
+ ++ R ++E E + A++ K P + E D K D R+
Sbjct: 107 KTKNVRKRKESSSEDDEAPIKASKPGKSVKPSKSDDSESDIEAMEAKLDADIAERDALAA 166
Query: 206 KYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGA-ELCELDY-EKKILDLVGQEGLQRCSH 263
+ + K+ + K + ++ +D EG + E Y +K+ +D + E L+ H
Sbjct: 167 R-INKKEKDKTRNVMEKKRDDNKDKEGSSMDKLREESRRQYLKKRKVDKL--EELEAIVH 223
Query: 264 ES------DK-QQRKKADLKYGSK 280
+ +K +R+KAD++Y K
Sbjct: 224 DDQTLFAREKLTKREKADMEYRKK 247
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 667 (239.9 bits), Expect = 4.4e-122, Sum P(3) = 4.4e-122
Identities = 123/190 (64%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RPDLK+L++SATLD E FS +F AP+F+IP RR+ V+++YTKAPEADY+
Sbjct: 546 FGLIKDIARFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPEADYL 605
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV + GD+LVFLTGQ++ E E+L++R R LG+KI+EL++ PIY NLP
Sbjct: 606 EACVVSVLQIHVTQSPGDVLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLP 665
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QAKIF PTP GARKVV+ATNIAETSLTIDGI YVIDPGF K KSYN KTGMESL+V
Sbjct: 666 SDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVT 725
Query: 623 PISKASANQR 632
P S+ASANQR
Sbjct: 726 PCSRASANQR 735
Score = 476 (172.6 bits), Expect = 4.4e-122, Sum P(3) = 4.4e-122
Identities = 120/319 (37%), Positives = 189/319 (59%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKD-DGIENLREVSRQKY 207
LR Q ++ L +R +E+ ++ + + + + R RKD + +R+++++ Y
Sbjct: 228 LRKQSRRQYLSKREQEKLEDLEAEIKDEEYLFSTQ-NLTDRERKDLEYKRTIRDMAKE-Y 285
Query: 208 LPKRAQKKLEEIKDR---TKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHE 264
K K+ EE K+R ++K N QK ++ +L++E+ + G++G
Sbjct: 286 -KKAGAKEQEERKNRYYMPEEKRNKSIPQK----DM-DLEFEETPREGGGEQG------R 333
Query: 265 SDKQQRKKADLKYGSKNK-----KQQYDDYQYVFEIEDKIVDFFRESVEL---------- 309
++ + A L++G++ + K++ + YQ + E E++++ F ++ +
Sbjct: 334 WEEARVATATLQFGARQERERRIKEEQERYQLILE-EEEMITFVSTAITMKGTLSEKESE 392
Query: 310 PDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEA 369
P+ S + + +QE R++LPI+P+RE+LL A+ ++ +LVI GETGSGKTTQIPQYL E
Sbjct: 393 PELSQAEKQKQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEE 452
Query: 370 GYTKQG-KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDG 428
GYTK G KIGCTQ QEM VKLG+EVGYSIRFEDCTS++T+LKYMTDG
Sbjct: 453 GYTKGGMKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDG 512
Query: 429 MLLREIVLEPSLESYSVLI 447
MLLRE + EP L SYSV+I
Sbjct: 513 MLLREFLTEPDLASYSVII 531
Score = 166 (63.5 bits), Expect = 1.8e-89, Sum P(3) = 1.8e-89
Identities = 41/151 (27%), Positives = 79/151 (52%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLT--GPKLTWKEEYDAIQRSRKDDG--IENLREVS 203
RL+D ++ R++++D TR + K ++E I+ + +D + LR+ S
Sbjct: 173 RLQDLEERDAFAERVKQKDKDKTRNILERNDKKAYEEAQKRIKMAEEDKRKMLPELRKQS 232
Query: 204 RQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSH 263
R++YL KR Q+KLE+++ KD+E LF Q LT E +L+Y++ I D+ + ++
Sbjct: 233 RRQYLSKREQEKLEDLEAEIKDEEYLFSTQNLTDRERKDLEYKRTIRDMAKE--YKKAGA 290
Query: 264 ESDKQQRKKADLKYGSKNKKQQYDDYQYVFE 294
+ ++++ + + +NK D FE
Sbjct: 291 KEQEERKNRYYMPEEKRNKSIPQKDMDLEFE 321
Score = 111 (44.1 bits), Expect = 4.4e-122, Sum P(3) = 4.4e-122
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 6 NLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEF-EFSSTTETRAFAQE 64
NL+ WVSD+L +LG S V Q++IGL +++ D ++LQ+ AFA E
Sbjct: 3 NLEQWVSDQLHDILGLSDRYVAQFMIGLVQKSSGPQDFVSRLQDTGTIDIDQRITAFAHE 62
Query: 65 IFARVPRKESESK 77
++ + P+K K
Sbjct: 63 LYDKAPKKHVVEK 75
Score = 77 (32.2 bits), Expect = 3.9e-80, Sum P(3) = 3.9e-80
Identities = 44/187 (23%), Positives = 88/187 (47%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
RD+ K + R+ R+ +++ + +T+K+E + +++ E R + L
Sbjct: 119 RDKGKKRKHLRQKRDESPSSSEEDKKKSITFKDEPKKAGKEDEEEEEWERGERERLQDLE 178
Query: 210 KR---AQKKLEEIKDRTK------DKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQR 260
+R A++ ++ KD+T+ DK+ E QK ++ E D K + +L Q R
Sbjct: 179 ERDAFAERVKQKDKDKTRNILERNDKKAYEEAQKRI--KMAEEDKRKMLPELRKQS---R 233
Query: 261 CSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALE 320
+ S ++Q K DL+ K+++ + Q + + E K +++ R ++ + A E
Sbjct: 234 RQYLSKREQEKLEDLEAEIKDEEYLFST-QNLTDRERKDLEYKRTIRDMAKEYKKAGAKE 292
Query: 321 MLQEERK 327
QEERK
Sbjct: 293 --QEERK 297
Score = 66 (28.3 bits), Expect = 5.5e-79, Sum P(3) = 5.5e-79
Identities = 33/144 (22%), Positives = 64/144 (44%)
Query: 184 YDAIQRSRKDDGIEN-LREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCE 242
++ ++ K +E R + RQ +R + ++D D E EG K ++ E
Sbjct: 61 HELYDKAPKKHVVEKPARAIERQVMEMERKNRTYTLLEDSESDGEAAREGGKEKKSK--E 118
Query: 243 LDYEKKILDLVGQEGLQRCSHESDKQQR---KKADLKYGSKNKKQQY---DDYQYVFEIE 296
D KK L + S E DK++ K K G ++++++ + + + ++E
Sbjct: 119 RDKGKKRKHLRQKRDESPSSSEEDKKKSITFKDEPKKAGKEDEEEEEWERGERERLQDLE 178
Query: 297 DKIVDFFRESVELPDKSAVKSALE 320
++ D F E V+ DK ++ LE
Sbjct: 179 ER--DAFAERVKQKDKDKTRNILE 200
Score = 39 (18.8 bits), Expect = 1.9e-66, Sum P(2) = 1.9e-66
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 2 DSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTET 58
+++ +K DK L + + QY+ ++ L + E K +E+ FS+ T
Sbjct: 209 EAQKRIKMAEEDKRKMLPELRKQSRRQYLSKREQEKLEDLEAEIKDEEYLFSTQNLT 265
Score = 37 (18.1 bits), Expect = 2.7e-114, Sum P(3) = 2.7e-114
Identities = 19/85 (22%), Positives = 35/85 (41%)
Query: 43 LETKLQEFEFSSTTETRAFAQEIFARVPRKESESKTNTILDAA----HYDADDDVIRITA 98
+E ++ E E + T T E R+ + K + D H D ++
Sbjct: 80 IERQVMEMERKNRTYTLLEDSESDGEAAREGGKEKKSKERDKGKKRKHLRQKRDESPSSS 139
Query: 99 STNKKR---FR---KRIGSEDDDDE 117
+KK+ F+ K+ G ED+++E
Sbjct: 140 EEDKKKSITFKDEPKKAGKEDEEEE 164
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 664 (238.8 bits), Expect = 2.0e-121, Sum P(3) = 2.0e-121
Identities = 123/190 (64%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SATLD FS +F AP+F+IP RR+ V++FYTKAPEADY+
Sbjct: 534 FGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYL 593
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 594 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 653
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNP+TGMESL V
Sbjct: 654 SDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVT 713
Query: 623 PISKASANQR 632
P SKASANQR
Sbjct: 714 PCSKASANQR 723
Score = 475 (172.3 bits), Expect = 2.0e-121, Sum P(3) = 2.0e-121
Identities = 123/307 (40%), Positives = 174/307 (56%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYL 208
LR + +E L +R RE+ +L + + + + R+ +R+++R+ Y
Sbjct: 227 LRKKSRREYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLARE-YR 285
Query: 209 PKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQ 268
Q+KLE +E GQ +L E E+ G+E QR E+
Sbjct: 286 AAGEQEKLEATNRYHMPEET--RGQPSRAVDLVE---EES--GAPGEE--QRRWEEA--- 333
Query: 269 QRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFR-------ESVELPDKSAVKSALEM 321
+ A LK+G+++ Q YQ V E E++ ++F R E P + E
Sbjct: 334 RLGAASLKFGARDAASQEPKYQLVLE-EEETIEFVRATQLQGNEEPSGPSPPSQAQQKES 392
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG-KIGCT 380
+Q R++LP++PFREELL A++++ VL+I GETGSGKTTQIPQYL+E GYTK+G KI CT
Sbjct: 393 VQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACT 452
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q +EMGVKLG+EVGYSIRFEDCTS++TVL+YMTDGMLLRE + EP L
Sbjct: 453 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 512
Query: 441 ESYSVLI 447
SYSV++
Sbjct: 513 ASYSVVM 519
Score = 159 (61.0 bits), Expect = 8.1e-79, Sum P(2) = 8.1e-79
Identities = 58/242 (23%), Positives = 111/242 (45%)
Query: 42 DLETKLQEFEFSSTTET-RAFAQEIFARVPRKESES-----KTNTILDAAHYDADDDVIR 95
DL ++F T+ R E AR +E+++ ++ +L+ + +++ V R
Sbjct: 54 DLSGPARDFALRLWTKVPRKAVVEKPARAAEREAQALLEKNRSYKLLEDSEESSEETVGR 113
Query: 96 ITASTNKKR-----FRKRIGSEDDDDEGIASXXXXXXXXXXXXXXXXXXXX-XXXXXXRL 149
+S KKR RK+ E++++E I+ RL
Sbjct: 114 TGSSLQKKRRKRKHLRKKCQEEEEEEEEISEKGRRKTGGSKQTEKPESEDEWERTERERL 173
Query: 150 RDQRGKEELERRIRERDVAATRKLT--GPKLTWKEEYDAIQRSRKDDG--IENLREVSRQ 205
+D ++ R+R+RD TR + K ++E ++ + +D + LR+ SR+
Sbjct: 174 QDLEERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRR 233
Query: 206 KYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHES 265
+YL KR ++KLE+++ D+E LF +L+ E EL Y++++ DL + R + E
Sbjct: 234 EYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLARE---YRAAGEQ 290
Query: 266 DK 267
+K
Sbjct: 291 EK 292
Score = 108 (43.1 bits), Expect = 2.0e-121, Sum P(3) = 2.0e-121
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 1 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFE-FSSTTETR 59
M + L+ WV D+L S+LG S+ V Q++IG +++ S+ D +L++ + + R
Sbjct: 1 MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEDFVQRLRDTDTLDLSGPAR 60
Query: 60 AFAQEIFARVPRK 72
FA ++ +VPRK
Sbjct: 61 DFALRLWTKVPRK 73
Score = 69 (29.3 bits), Expect = 2.5e-69, Sum P(2) = 2.5e-69
Identities = 40/169 (23%), Positives = 72/169 (42%)
Query: 156 EELERRIRERDVAATRKLTGPKLTWKEE-YDAIQRSRKDDGIENLREVSRQKYLPKRAQK 214
E+ +R+R+ D T L+GP + + + R + E Q L K
Sbjct: 41 EDFVQRLRDTD---TLDLSGPARDFALRLWTKVPRKAVVEKPARAAEREAQALLEKNRSY 97
Query: 215 KLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKAD 274
KL ++D + E G+ TG+ L + ++K L QE + S+K +RK
Sbjct: 98 KL--LEDSEESSEETV-GR--TGSSLQKKRRKRKHLRKKCQEEEEEEEEISEKGRRKTGG 152
Query: 275 LKYGSKNKKQ---QYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALE 320
K K + + + + + + ++E++ D F E V DK ++ LE
Sbjct: 153 SKQTEKPESEDEWERTERERLQDLEER--DAFAERVRQRDKDRTRNVLE 199
Score = 52 (23.4 bits), Expect = 5.9e-77, Sum P(3) = 5.9e-77
Identities = 30/140 (21%), Positives = 61/140 (43%)
Query: 157 ELERRIRERDVAAT-RKLTGPKLTWKEEYDAIQR-SRKDDGIENLREVSRQKYLPKRAQK 214
E R ER+ A K KL E + + R ++ R ++K+L K+ Q+
Sbjct: 77 EKPARAAEREAQALLEKNRSYKLLEDSEESSEETVGRTGSSLQKKRR--KRKHLRKKCQE 134
Query: 215 KLEEIKDRTKDKENLFEGQKLTGAELCELDYEK----KILDLVGQEGLQRCSHESDKQQR 270
+ EE ++ ++ G K T E ++E+ ++ DL ++ + DK +
Sbjct: 135 EEEEEEEISEKGRRKTGGSKQTEKPESEDEWERTERERLQDLEERDAFAERVRQRDKDRT 194
Query: 271 KKADLKYGSKNKKQQYDDYQ 290
+ L+ ++ K+ Y++ Q
Sbjct: 195 RNV-LE---RSDKKAYEEAQ 210
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 665 (239.2 bits), Expect = 9.1e-121, Sum P(3) = 9.1e-121
Identities = 124/190 (65%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SATLD FS +F APIF+IP RR+ V++FYTKAPEADY+
Sbjct: 537 FGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYL 596
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 597 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 656
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNP+TGMESL V
Sbjct: 657 SDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVT 716
Query: 623 PISKASANQR 632
P SKASANQR
Sbjct: 717 PCSKASANQR 726
Score = 474 (171.9 bits), Expect = 9.1e-121, Sum P(3) = 9.1e-121
Identities = 123/308 (39%), Positives = 175/308 (56%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIEN-LREVSRQKY 207
LR + +E L +R RE+ +L + + + + + R++ + +R+++R+ Y
Sbjct: 230 LRKKSRREYLAKREREKLEDLEAELADEEFLFGD-VELSRHERRELRYKRRVRDLARE-Y 287
Query: 208 LPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDK 267
Q+KLE +E GQ +L E E+ G+E QR E+
Sbjct: 288 RAAGEQEKLEATNRYHMPEET--RGQPARTVDLVE---EES--GAPGEE--QRRWEEA-- 336
Query: 268 QQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFR-------ESVELPDKSAVKSALE 320
+ A LK+G+++ Q YQ V E E++ ++F R E P E
Sbjct: 337 -RLGAASLKFGARDAASQEPKYQLVLE-EEETIEFVRATQLQGDEEPSAPPAPTQAQQKE 394
Query: 321 MLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG-KIGC 379
+Q R++LP++PFREELL A++ + VL+I GETGSGKTTQIPQYL+E GYTK+G KI C
Sbjct: 395 SIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIAC 454
Query: 380 TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPS 439
TQ +EMGVKLG+EVGYSIRFEDCTS++TVL+YMTDGMLLRE + EP
Sbjct: 455 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 514
Query: 440 LESYSVLI 447
L SYSV++
Sbjct: 515 LASYSVVM 522
Score = 146 (56.5 bits), Expect = 2.8e-86, Sum P(3) = 2.8e-86
Identities = 57/227 (25%), Positives = 103/227 (45%)
Query: 54 STTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRITASTNKKRFR------K 107
+ E A A E AR +++ S +L+ + +++ V R +S KKR + K
Sbjct: 74 AVVEKPARAAEREARALLEKNRSYM--LLEDSEESSEETVGRAGSSVQKKRKKRKHLRKK 131
Query: 108 RIGSEDDDDEGIASXXXXXXXXXXXXXXXXXXXXXX---XXXXRLRDQRGKEELERRIRE 164
R E+D++E S RL+D ++ R+R+
Sbjct: 132 REAEEEDEEEEQVSEKGKRKTGEKKEQTEKPESEDEWERTERERLQDLEERDAFAERVRQ 191
Query: 165 RDVAATRKLT--GPKLTWKEEYDAIQRSRKDDG--IENLREVSRQKYLPKRAQKKLEEIK 220
RD TR + K ++E ++ + +D + LR+ SR++YL KR ++KLE+++
Sbjct: 192 RDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKREREKLEDLE 251
Query: 221 DRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDK 267
D+E LF +L+ E EL Y++++ DL + R + E +K
Sbjct: 252 AELADEEFLFGDVELSRHERRELRYKRRVRDLARE---YRAAGEQEK 295
Score = 102 (41.0 bits), Expect = 9.1e-121, Sum P(3) = 9.1e-121
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 1 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFE-FSSTTETR 59
M + L+ WV D+L S+LG S+ V Q++IG +++ S+ + +L++ + + R
Sbjct: 1 MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR 60
Query: 60 AFAQEIFARVPRK 72
FA ++ +VPRK
Sbjct: 61 DFALRLWNKVPRK 73
Score = 48 (22.0 bits), Expect = 3.2e-67, Sum P(2) = 3.2e-67
Identities = 33/175 (18%), Positives = 77/175 (44%)
Query: 156 EELERRIRERDVAATRKLTGP----------KLTWKEEYDAIQRSRKDDGIENLREVSRQ 205
EE +R+R+ D T L+GP K+ K + R+ + + L E +R
Sbjct: 41 EEFVQRLRDTD---TLDLSGPARDFALRLWNKVPRKAVVEKPARAAEREA-RALLEKNRS 96
Query: 206 KYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHES 265
L + +++ EE R ++ + E + E + + V ++G ++ +
Sbjct: 97 YMLLEDSEESSEETVGRAGSSVQKKRKKRKHLRKKREAEEEDEEEEQVSEKGKRKTGEKK 156
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALE 320
++ ++ +++ ++ + ++++ D +E++ D F E V DK ++ LE
Sbjct: 157 EQTEKPESEDEW-ERTERERLQD------LEER--DAFAERVRQRDKDRTRNVLE 202
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 664 (238.8 bits), Expect = 1.5e-120, Sum P(3) = 1.5e-120
Identities = 123/190 (64%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SATLD FS +F AP+F+IP RR+ V++FYTKAPEADY+
Sbjct: 537 FGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYL 596
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 597 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 656
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNP+TGMESL V
Sbjct: 657 SDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVT 716
Query: 623 PISKASANQR 632
P SKASANQR
Sbjct: 717 PCSKASANQR 726
Score = 471 (170.9 bits), Expect = 1.5e-120, Sum P(3) = 1.5e-120
Identities = 122/307 (39%), Positives = 172/307 (56%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYL 208
LR + +E L +R RE+ +L + + + + R+ +R+++R+ Y
Sbjct: 230 LRKKSRREYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLARE-YR 288
Query: 209 PKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQ 268
Q+KLE +E GQ +L E E+ G+E QR E+
Sbjct: 289 AAGEQEKLEATNRYHMPEET--RGQPTRAVDLVE---EES--GAPGEE--QRRWEEA--- 336
Query: 269 QRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFR-------ESVELPDKSAVKSALEM 321
+ A LK+G+++ Q YQ V E E++ ++F R E P E
Sbjct: 337 RLGAASLKFGARDAASQEPKYQLVLE-EEETIEFVRATQLQGDEEPAAPPAPTQAQQKES 395
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG-KIGCT 380
+Q R++LP++PFREELL AV+ + +L+I GETGSGKTTQIPQYL+E GYT++G KI CT
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACT 455
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q +EMGVKLG+EVGYSIRFEDCTS++TVL+YMTDGMLLRE + EP L
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 515
Query: 441 ESYSVLI 447
SYSV++
Sbjct: 516 ASYSVVM 522
Score = 141 (54.7 bits), Expect = 7.5e-86, Sum P(3) = 7.5e-86
Identities = 37/124 (29%), Positives = 68/124 (54%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLT--GPKLTWKEEYDAIQRSRKDDG--IENLREVS 203
RL+D ++ R+R+RD TR + K ++E ++ + +D + LR+ S
Sbjct: 175 RLQDLEERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKS 234
Query: 204 RQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSH 263
R++YL KR ++KLE+++ D+E LF +L+ E EL Y++++ DL + R +
Sbjct: 235 RREYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLARE---YRAAG 291
Query: 264 ESDK 267
E +K
Sbjct: 292 EQEK 295
Score = 104 (41.7 bits), Expect = 1.5e-120, Sum P(3) = 1.5e-120
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 1 MDSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFE-FSSTTETR 59
M + L+ WV D+L S+LG S+ V Q++IG +++ S+ + +L++ + + R
Sbjct: 1 MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR 60
Query: 60 AFAQEIFARVPRKESESK 77
FA +++ +VPRK K
Sbjct: 61 DFALKLWNKVPRKAVAEK 78
Score = 52 (23.4 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 37/172 (21%), Positives = 71/172 (41%)
Query: 156 EELERRIRERDVAATRKLTGPKLTWKEE-YDAIQRSRKDDGIENLREVSRQKYLPKRAQK 214
EE +R+R+ D T L+GP + + ++ + R + E + L K
Sbjct: 41 EEFVQRLRDTD---TLDLSGPARDFALKLWNKVPRKAVAEKPARAAEREARALLEKNRSY 97
Query: 215 KLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKAD 274
+L ++D + E E G+ L + ++K L QE + E ++ KK
Sbjct: 98 RL--LEDSEESSE---EAVGRAGSSLQKKRKKRKHLRKKRQEEEEEEEEEEVPEKGKKTT 152
Query: 275 LKYGSKNKKQQYDDY------QYVFEIEDKIVDFFRESVELPDKSAVKSALE 320
+ +K + +D + + ++E++ D F E V DK ++ LE
Sbjct: 153 GGNKPQTEKPESEDEWERTERERLQDLEER--DAFAERVRQRDKDRTRNVLE 202
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 637 (229.3 bits), Expect = 2.4e-115, Sum P(3) = 2.4e-115
Identities = 120/190 (63%), Positives = 151/190 (79%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RPDLK+LISSAT+DAE FS YF AP+F +P RRY V+++YT PEA+YI
Sbjct: 552 FGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYI 611
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+AAI T LQIH +P GDILVFLTGQD+ E E +++ R LG +I E+I+CPIY NLP
Sbjct: 612 QAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLP 671
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+ELQAKIF+PTP GARKVVLATNIAETS+TIDG+ +VID GF K YNP+TGMESL+
Sbjct: 672 SELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSV 731
Query: 623 PISKASANQR 632
P S+ASA+QR
Sbjct: 732 PCSRASADQR 741
Score = 416 (151.5 bits), Expect = 2.4e-115, Sum P(3) = 2.4e-115
Identities = 115/306 (37%), Positives = 173/306 (56%)
Query: 150 RDQRGKEELERRIR-ERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYL 208
R Q+ E L R IR E + A KLT ++ E+ + R ++ + L + + + +
Sbjct: 247 RAQQQLEILRREIRDEEQLFAGEKLTQAEIRELEKKKELLRIAEER--QRLEKQATEYQM 304
Query: 209 PKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQ 268
P+ + ++ DR + +E L++ K + + E+ + + G QR + Q
Sbjct: 305 PEDYFTEQGKL-DRKRKEEVLYQRYKDSN------EGEQNEVTM-GAAEQQRW----EAQ 352
Query: 269 QRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRE---SVELP---DKSAVKSALEML 322
Q KA L ++ + +VF+ E + +DF + S E P DK + L
Sbjct: 353 QINKALLFDQNEWLPPGEKQFDFVFD-ESQQIDFLLDTKLSAENPVDTDKMTDVKVEKSL 411
Query: 323 QEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGCTQ 381
+ RK+LP+Y ++++LL+A++EY VL+IV ETGSGKTTQ+PQ+L+EAGYTK K I CTQ
Sbjct: 412 ESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQ 471
Query: 382 LXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLE 441
+EM V+LG EVGYSIRFE+ TS+KTV+KY+TDGMLLRE + EP L
Sbjct: 472 PRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLA 531
Query: 442 SYSVLI 447
SYSV+I
Sbjct: 532 SYSVII 537
Score = 168 (64.2 bits), Expect = 1.3e-91, Sum P(4) = 1.3e-91
Identities = 46/129 (35%), Positives = 71/129 (55%)
Query: 148 RLRDQRGKEELERRIRERDV-AATRKLTGPKLTWKEEYDAIQRSRKDDG------IENLR 200
RL D R +EE E R+R +D+ AAT + + + R DD LR
Sbjct: 177 RLNDLREREEFEERLRRKDLEAATNEFVEDYSSKFSSEELALRKLADDPESWRKLASELR 236
Query: 201 EVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQR 260
+ SRQ+YL RAQ++LE ++ +D+E LF G+KLT AE+ EL+ +K++L + E QR
Sbjct: 237 KKSRQQYLKPRAQQQLEILRREIRDEEQLFAGEKLTQAEIRELEKKKELLRIA--EERQR 294
Query: 261 CSHESDKQQ 269
++ + Q
Sbjct: 295 LEKQATEYQ 303
Score = 140 (54.3 bits), Expect = 2.4e-115, Sum P(3) = 2.4e-115
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 6 NLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTET-RAFAQE 64
+L+ +VSDK ISLLG S+P+VV+Y+I +K + SS +L KL F + FA
Sbjct: 2 SLEQYVSDKAISLLGMSEPSVVEYLIAEAKGSSSSNNLYQKLVSFGMDGDDPAVKEFAHT 61
Query: 65 IFARVPRKESESKTN 79
++AR+PR+ S K N
Sbjct: 62 LYARIPREGSRPKEN 76
Score = 54 (24.1 bits), Expect = 1.1e-79, Sum P(4) = 1.1e-79
Identities = 38/199 (19%), Positives = 84/199 (42%)
Query: 150 RDQRGKEELERRIRERDVAAT---RKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQK 206
R + K E+ RR R+ D + ++ + E D++ ++ E + ++
Sbjct: 118 RSKTPKREIARRQRDEDEWESDEYEEVVDGSASHPIEEDSVSTDFQNHDYEKSSDPETER 177
Query: 207 YLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESD 266
R +++ EE + R KD E T E E DY K + L++ + + +
Sbjct: 178 LNDLREREEFEE-RLRRKDLE------AATN-EFVE-DYSSKFSS--EELALRKLADDPE 226
Query: 267 KQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEER 326
++ ++L+ K +QQY + ++E + E + ++ + L++++
Sbjct: 227 SWRKLASELR---KKSRQQYLKPRAQQQLEILRREIRDEEQLFAGEKLTQAEIRELEKKK 283
Query: 327 KTLPIYPFREELLQAVSEY 345
+ L I R+ L + +EY
Sbjct: 284 ELLRIAEERQRLEKQATEY 302
Score = 49 (22.3 bits), Expect = 9.1e-106, Sum P(3) = 9.1e-106
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 28 QYVIGLSKQALSSADLETKLQ--EFEFSSTTETRAF-----AQEIFARVPRKESESKTNT 80
+ V G + + + T Q ++E SS ET +E R+ RK+ E+ TN
Sbjct: 143 EVVDGSASHPIEEDSVSTDFQNHDYEKSSDPETERLNDLREREEFEERLRRKDLEAATNE 202
Query: 81 ILD--AAHYDADDDVIRITASTNKKRFRKRIGSE 112
++ ++ + +++ +R A + + +RK + SE
Sbjct: 203 FVEDYSSKFSSEELALRKLAD-DPESWRK-LASE 234
Score = 39 (18.8 bits), Expect = 1.3e-91, Sum P(4) = 1.3e-91
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 426 TDGMLLREIVLEPSLESYSVLIDLINYRPDL 456
TD M ++ +E SLES + + Y+ DL
Sbjct: 399 TDKMT--DVKVEKSLESSRKSLPVYQYKDDL 427
Score = 39 (18.8 bits), Expect = 5.2e-47, Sum P(3) = 5.2e-47
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 432 REIVLEPSLESYSVLIDLINY 452
R++VL ++ S+ ID +N+
Sbjct: 687 RKVVLATNIAETSITIDGVNF 707
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 700 (251.5 bits), Expect = 2.7e-114, Sum P(2) = 2.7e-114
Identities = 134/190 (70%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L D+ +RPDLKLLISSAT+DAE FSDYF AP F IP R+Y V YT+APEADY+
Sbjct: 600 FGLLKDITRFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYL 659
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+AA+VT LQIH+ EP+GDILVFLTGQ++ + A E+L+ RTRGLGTKI ELII IY LP
Sbjct: 660 DAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLP 719
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
T+LQAKIFEPTP ARKVVLATNIAETSLTIDGI YVIDPGF K K +NP+TGMESL++
Sbjct: 720 TDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVIT 779
Query: 623 PISKASANQR 632
P+S+ASANQR
Sbjct: 780 PVSRASANQR 789
Score = 460 (167.0 bits), Expect = 2.7e-114, Sum P(2) = 2.7e-114
Identities = 120/310 (38%), Positives = 169/310 (54%)
Query: 154 GKEELERRIRERDVAATRKL-TGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRA 212
G+E+ + +R++ +L KLT +E D ++ +K L E++ Q+ +
Sbjct: 292 GEEQKRLILLKREIEEEYELFKDQKLTEQEIKD-FEKKKK------LYELASQRINESQQ 344
Query: 213 QKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRKK 272
++ KDK++L + + + KK D E ++ + K
Sbjct: 345 SDDYYQLPSEIKDKDSLLKSSYINDNK------NKKGNDSSSSSSYNPEQKEWEQNRMKS 398
Query: 273 A---DLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVEL------------PDKSAVKS 317
A + + N ++Y+YVFE D+I +F +E V P
Sbjct: 399 AISENRGLSTANIGGGNEEYEYVFE--DQI-EFIKEEVLKQGQKGDGVMILKPGDDGSAQ 455
Query: 318 ALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI 377
A +QE RK+LP+YP+RE+L+ AV EY VL+IVGETGSGKTTQIPQYL+EAG++K GKI
Sbjct: 456 AKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKI 515
Query: 378 GCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLE 437
GCTQ +E+G KLG+EVGYSIRFEDCTS KTVL+YMTDGML+RE +
Sbjct: 516 GCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTA 575
Query: 438 PSLESYSVLI 447
P L SYSVLI
Sbjct: 576 PDLASYSVLI 585
Score = 158 (60.7 bits), Expect = 2.0e-82, Sum P(2) = 2.0e-82
Identities = 42/137 (30%), Positives = 72/137 (52%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R+QR +EL RI++RD +T+K KE + R +++ +E R SR+KYL
Sbjct: 232 REQREVKELSDRIKKRDEKSTKKKIVDDSETKESIERKNRLEQNEQLETERTKSRRKYLV 291
Query: 210 KRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQ 269
QK+L +K +++ LF+ QKLT E+ + + +KK+ +L Q + S +SD
Sbjct: 292 GEEQKRLILLKREIEEEYELFKDQKLTEQEIKDFEKKKKLYELASQRINE--SQQSDDYY 349
Query: 270 RKKADLKYGSKNKKQQY 286
+ +++K K Y
Sbjct: 350 QLPSEIKDKDSLLKSSY 366
Score = 157 (60.3 bits), Expect = 2.6e-82, Sum P(2) = 2.6e-82
Identities = 75/312 (24%), Positives = 141/312 (45%)
Query: 3 SEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETRAFA 62
+ +++K WVSDK+ +LGY + +V Y+I LSK+A + L E +F + T++FA
Sbjct: 4 NNESIKNWVSDKIFDILGYRESTMVDYIIALSKKAKDVNSFISTLTEQDFPINSNTKSFA 63
Query: 63 QEIFARVPRK------ESESKTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDD 116
QE+ + +K S S ++T L ++ D + +I K ++ I D DD
Sbjct: 64 QELLNKSQQKIQNITSSSSSSSSTSLSSSSSSKDKEKEKIEFLKKNKSYKLVI---DHDD 120
Query: 117 EGIASXXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQRGKEELERRIRERDVAATRKLTGP 176
+ + S R + ++ KE+ +++ ++ ++TRK +
Sbjct: 121 DIVNSSGSSDSDSDSERK-------------RKKKEKKKEKKDKKDKKDKKSSTRKKSDN 167
Query: 177 KLTWKEEYDA--IQRSRKDD---GIENLREVSRQKYLPKRAQKK--LEEIKDRTKD---- 225
W +E + I+ + K+D EN + L KR K +EE + +
Sbjct: 168 N--WDDEIEPEPIKPNEKEDENNNNENNDNNNDNNNLQKRQPYKSIIEEENNNDNNNNNG 225
Query: 226 KENLFEGQKLTGAELC-------ELDYEKKILD-LVGQEGLQRCSH-ESDKQ---QRKKA 273
+E+ +E ++ EL E +KKI+D +E ++R + E ++Q +R K+
Sbjct: 226 EEDEYEREQREVKELSDRIKKRDEKSTKKKIVDDSETKESIERKNRLEQNEQLETERTKS 285
Query: 274 DLKY--GSKNKK 283
KY G + K+
Sbjct: 286 RRKYLVGEEQKR 297
Score = 73 (30.8 bits), Expect = 1.9e-73, Sum P(2) = 1.9e-73
Identities = 32/136 (23%), Positives = 64/136 (47%)
Query: 164 ERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRT 223
ER+ ++L+ ++ ++E + ++ DD E + R+ L + Q + E RT
Sbjct: 231 EREQREVKELSD-RIKKRDE-KSTKKKIVDDS-ETKESIERKNRLEQNEQLETE----RT 283
Query: 224 KDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKK 283
K + G++ L + + E++ +L + L + ++++K +L N+
Sbjct: 284 KSRRKYLVGEEQKRLILLKREIEEEY-ELFKDQKLTEQEIKDFEKKKKLYELASQRINES 342
Query: 284 QQYDDY-QYVFEIEDK 298
QQ DDY Q EI+DK
Sbjct: 343 QQSDDYYQLPSEIKDK 358
Score = 55 (24.4 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 220 KDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGS 279
KD+ K+K + K +L +D++ D+V G +S+++ RKK + K
Sbjct: 96 KDKEKEKIEFLKKNK--SYKLV-IDHDD---DIVNSSGSSDSDSDSERK-RKKKEKKKEK 148
Query: 280 KNKKQQYD 287
K+KK + D
Sbjct: 149 KDKKDKKD 156
Score = 44 (20.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 528 QDQFE-TAEEILKQRTRGLGTKI 549
+DQ E EE+LKQ +G G I
Sbjct: 423 EDQIEFIKEEVLKQGQKGDGVMI 445
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 663 (238.4 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 123/190 (64%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SATLD FS +F AP+F+IP RR+ V++FYTKAPEADY+
Sbjct: 536 FGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYL 595
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 596 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 655
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNP+TGMESL V
Sbjct: 656 SDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVT 715
Query: 623 PISKASANQR 632
P SKASANQR
Sbjct: 716 PCSKASANQR 725
Score = 486 (176.1 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 126/308 (40%), Positives = 175/308 (56%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYL 208
LR + +E L +R RE+ +L ++ + + + R+ +R+++R+ Y
Sbjct: 228 LRKKSRREYLAKREREKLEDLEAELADEEVLFGDVELSRHERRELKYKRRVRDLARE-YR 286
Query: 209 PKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQ 268
Q+KLE KE GQ ++ E E+ G+E QR E+
Sbjct: 287 AAGEQEKLEATNRYHMPKET--RGQPARATDIVE---EES--GAPGEE--QRRWEEA--- 334
Query: 269 QRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFR--------ESVELPDKSAVKSALE 320
+ A LK+G+++ Q YQ V E ED+ ++F R E P SA E
Sbjct: 335 RLDAASLKFGARDAAAQEPQYQLVLE-EDETIEFVRAAQLQGDEEPSSGPPLSAQAQQKE 393
Query: 321 MLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG-KIGC 379
+Q R++LP++PFREELL A++ + VL+I GETGSGKTTQIPQYL+E GYTK+G KI C
Sbjct: 394 SIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIAC 453
Query: 380 TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPS 439
TQ +EMGVKLG+EVGYSIRFEDCTS++TVL+YMTDGMLLRE + EP
Sbjct: 454 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 513
Query: 440 LESYSVLI 447
L SYSV++
Sbjct: 514 LASYSVVM 521
Score = 141 (54.7 bits), Expect = 8.6e-77, Sum P(2) = 8.6e-77
Identities = 37/124 (29%), Positives = 68/124 (54%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLT--GPKLTWKEEYDAIQRSRKDDG--IENLREVS 203
RL+D ++ R+R+RD TR + K ++E ++ + +D + LR+ S
Sbjct: 173 RLQDLEERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKS 232
Query: 204 RQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSH 263
R++YL KR ++KLE+++ D+E LF +L+ E EL Y++++ DL + R +
Sbjct: 233 RREYLAKREREKLEDLEAELADEEVLFGDVELSRHERRELKYKRRVRDLARE---YRAAG 289
Query: 264 ESDK 267
E +K
Sbjct: 290 EQEK 293
Score = 58 (25.5 bits), Expect = 4.8e-68, Sum P(2) = 4.8e-68
Identities = 39/171 (22%), Positives = 68/171 (39%)
Query: 156 EELERRIRERDVAATRKLTGPKLTWKEE-YDAIQRSRKDDGIENLREVSRQKYLPKRAQK 214
EE +R+R+ + T L GP + + + + R + E + L K
Sbjct: 41 EEFVQRLRDTE---TLDLGGPARDFALKLWSKVPRKAVVEKPARAAEREARALLEKNRSY 97
Query: 215 KLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKAD 274
KL E D E+ E G+ L + +K L QE + S+ +RK
Sbjct: 98 KLLE------DSESGEEAVARDGSSLQKKRKRRKHLRKKQQEEEEEEEEASESGKRKTGG 151
Query: 275 LKYGSKNKKQQYDDYQY-----VFEIEDKIVDFFRESVELPDKSAVKSALE 320
K ++ K D+++ + ++E++ D F E V DK ++ LE
Sbjct: 152 SKSPTEEKPASEDEWERTERERLQDLEER--DAFAERVRQRDKDRTRNVLE 200
Score = 56 (24.8 bits), Expect = 7.8e-68, Sum P(2) = 7.8e-68
Identities = 31/141 (21%), Positives = 65/141 (46%)
Query: 157 ELERRIRERDVAAT-RKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKK 215
E R ER+ A K KL E+ ++ + + DG ++ R+K+L K+ Q++
Sbjct: 77 EKPARAAEREARALLEKNRSYKLL--EDSESGEEAVARDGSSLQKKRKRRKHLRKKQQEE 134
Query: 216 LEEIKDRTKDKENLFEGQKLTGAE--LCELDYEK----KILDLVGQEGLQRCSHESDKQQ 269
EE ++ ++ + G K E E ++E+ ++ DL ++ + DK +
Sbjct: 135 EEEEEEASESGKRKTGGSKSPTEEKPASEDEWERTERERLQDLEERDAFAERVRQRDKDR 194
Query: 270 RKKADLKYGSKNKKQQYDDYQ 290
+ L+ ++ K+ Y++ Q
Sbjct: 195 TRNV-LE---RSDKKAYEEAQ 211
Score = 55 (24.4 bits), Expect = 9.9e-68, Sum P(2) = 9.9e-68
Identities = 29/144 (20%), Positives = 68/144 (47%)
Query: 150 RDQRGKEELERRIRE---RDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQK 206
+ Q+ +EE E E R ++ T K ++E++ +R R D +E R+ ++
Sbjct: 129 KKQQEEEEEEEEASESGKRKTGGSKSPTEEKPASEDEWERTERERLQD-LEE-RDAFAER 186
Query: 207 YLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESD 266
+ +R + + + +R+ DK+ E QK ++ E D + + +L + R + +
Sbjct: 187 -VRQRDKDRTRNVLERS-DKKAYEEAQKRL--KMAEEDRKAMVPELRKKS---RREYLAK 239
Query: 267 KQQRKKADLKYGSKNKKQQYDDYQ 290
+++ K DL+ +++ + D +
Sbjct: 240 REREKLEDLEAELADEEVLFGDVE 263
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 662 (238.1 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 122/190 (64%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SAT+D FS +F AP+F+IP RR+ V++FYTKAPEADY+
Sbjct: 533 FGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYL 592
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 593 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 652
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNP+TGMESL V
Sbjct: 653 SDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVT 712
Query: 623 PISKASANQR 632
P SKASANQR
Sbjct: 713 PCSKASANQR 722
Score = 479 (173.7 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 124/308 (40%), Positives = 175/308 (56%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIEN-LREVSRQKY 207
LR + +E L +R RE+ +L + + + + + R++ + +R+++R+ Y
Sbjct: 226 LRKKSRREYLAKREREKLEDLEAELADEEFLFGD-VELSRHERQELKYKRRVRDLARE-Y 283
Query: 208 LPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDK 267
Q+KLE KE GQ +L E E+ G+E QR E+
Sbjct: 284 RAAGEQEKLEATNRYHMPKET--RGQPARAVDLVE---EES--GAPGEE--QRRWEEA-- 332
Query: 268 QQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFR-------ESVELPDKSAVKSALE 320
+ A LK+G+++ Q YQ V E E++ ++F R E P S E
Sbjct: 333 -RLGAASLKFGARDAASQEPKYQLVLE-EEETIEFVRATQLQGDEEPSAPPTSTQAQQKE 390
Query: 321 MLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG-KIGC 379
+Q R++LP++PFREELL A++ + VL+I GETGSGKTTQIPQYL+E GYT +G KI C
Sbjct: 391 SIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIAC 450
Query: 380 TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPS 439
TQ +EMGVKLG+EVGYSIRFEDCTS++TVL+YMTDGMLLRE + EP
Sbjct: 451 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 510
Query: 440 LESYSVLI 447
L SYSV++
Sbjct: 511 LASYSVVM 518
Score = 151 (58.2 bits), Expect = 9.4e-78, Sum P(2) = 9.4e-78
Identities = 54/223 (24%), Positives = 101/223 (45%)
Query: 54 STTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRITASTNKKR-----FRKR 108
+ E A A E AR +++ S +L+ + +++ V R +S KKR RK+
Sbjct: 74 AVVEKPARAAEREARALLEKNRSYR--LLEDSEESSEETVSRAGSSLQKKRKKRKHLRKK 131
Query: 109 IGSEDDDDEGIASXXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQRGKEELERRIRERDVA 168
E++++ RL+D ++ R+R+RD
Sbjct: 132 REEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLEERDAFAERVRQRDKD 191
Query: 169 ATRKLT--GPKLTWKEEYDAIQRSRKDDG--IENLREVSRQKYLPKRAQKKLEEIKDRTK 224
TR + K ++E ++ + +D + LR+ SR++YL KR ++KLE+++
Sbjct: 192 RTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKREREKLEDLEAELA 251
Query: 225 DKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDK 267
D+E LF +L+ E EL Y++++ DL + R + E +K
Sbjct: 252 DEEFLFGDVELSRHERQELKYKRRVRDLARE---YRAAGEQEK 291
Score = 68 (29.0 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 34/157 (21%), Positives = 70/157 (44%)
Query: 186 AIQRSRKD-DGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELD 244
++Q+ RK + RE ++ ++ +KK K +T+ E+ E ++ L +L+
Sbjct: 117 SLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLE 176
Query: 245 YEKKILDLVGQEGLQRCSH---ESDKQQRKKAD--LKYGSKNKKQQYDDY------QYVF 293
+ V Q R + SDK+ ++A LK +++K + +Y+
Sbjct: 177 ERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLA 236
Query: 294 EIE-DKIVDFFRESVELPDKSAVKSALEMLQEERKTL 329
+ E +K+ D EL D+ + +E+ + ER+ L
Sbjct: 237 KREREKLEDL---EAELADEEFLFGDVELSRHERQEL 270
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 682 (245.1 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 129/190 (67%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LKLLISSATLDAE FS +F APIF+IP RRY V++FYTKAPEADYI
Sbjct: 386 FGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYI 445
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A V+ LQIH +P+GDILVFLTGQD+ ET +E+L R + LG+KI ELI+ P+Y NLP
Sbjct: 446 DACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLP 505
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QAKIFEPTP ARKV+LATNIAETSLTID I YVIDPGFAK ++N +TGMESL+V
Sbjct: 506 SDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVV 565
Query: 623 PISKASANQR 632
PISKASANQR
Sbjct: 566 PISKASANQR 575
Score = 442 (160.7 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 119/311 (38%), Positives = 178/311 (57%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKY- 207
LR Q ++ LE+R ++ + + + E + + K++ RE +Q
Sbjct: 82 LRLQSRRQYLEKRKDDKVAELEADILDDEYLFDES--VLTKREKEE-----REYKKQLLN 134
Query: 208 LPKRAQK--KLEEIKDRTKDKENLFEGQKLTGAELCELD-YEKKILDLVGQEGLQRCSHE 264
+ K +K +LE I+ R ++L +G++ +E E+D +EK Q ++ E
Sbjct: 135 IAKEHEKARELERIQ-RYNMPQDLKKGER---SEYVEVDEFEK-------QPNSEQKKWE 183
Query: 265 SDKQQRKKADLKYGSKNKKQQYDDYQYVFE-----IEDKIVDFFRE--SVELPDKSAVKS 317
++ Q A +G+K+ K + ++Y+ + + I+ +D RE S P+ + +
Sbjct: 184 AE--QLASARFHFGAKDAKAE-EEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKER 240
Query: 318 ALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK- 376
L E R++LP+YPF+E+L+ AV E+ VL+I GETGSGKTTQ+PQYL EAG+TK K
Sbjct: 241 KRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKM 300
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL 436
IGCTQ +EMGVKLG+EVGYSIRFEDCTSD+T+LKYMTDG L RE +
Sbjct: 301 IGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLS 360
Query: 437 EPSLESYSVLI 447
EP L SYSV+I
Sbjct: 361 EPDLASYSVMI 371
Score = 147 (56.8 bits), Expect = 1.1e-80, Sum P(2) = 1.1e-80
Identities = 43/148 (29%), Positives = 79/148 (53%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKL---TGPKLTWKEEYDAIQRSRKD-DGI-ENLREV 202
RL+D + ++E R+++RD TR + TG + +E ++ +D D I +LR
Sbjct: 26 RLKDLQERDEFASRLKKRDDDRTRNVVDSTGGRRAIEEATKRLKLEHEDRDKIVPHLRLQ 85
Query: 203 SRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCS 262
SR++YL KR K+ E++ D E LF+ LT E E +Y+K++L++ + R
Sbjct: 86 SRRQYLEKRKDDKVAELEADILDDEYLFDESVLTKREKEEREYKKQLLNIAKEHEKAR-E 144
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDDYQ 290
E ++ DLK G +++ + D+++
Sbjct: 145 LERIQRYNMPQDLKKGERSEYVEVDEFE 172
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 664 (238.8 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 123/190 (64%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SATLD FS +F AP+F+IP RR+ V++FYTKAPEADY+
Sbjct: 537 FGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYL 596
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 597 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 656
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNP+TGMESL V
Sbjct: 657 SDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVT 716
Query: 623 PISKASANQR 632
P SKASANQR
Sbjct: 717 PCSKASANQR 726
Score = 471 (170.9 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
Identities = 122/307 (39%), Positives = 172/307 (56%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYL 208
LR + +E L +R RE+ +L + + + + R+ +R+++R+ Y
Sbjct: 230 LRKKSRREYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLARE-YR 288
Query: 209 PKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQ 268
Q+KLE +E GQ +L E E+ G+E QR E+
Sbjct: 289 AAGEQEKLEATNRYHMPEET--RGQPTRAVDLVE---EES--GAPGEE--QRRWEEA--- 336
Query: 269 QRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFR-------ESVELPDKSAVKSALEM 321
+ A LK+G+++ Q YQ V E E++ ++F R E P E
Sbjct: 337 RLGAASLKFGARDAASQEPKYQLVLE-EEETIEFVRATQLQGDEEPAAPPAPTQAQQKES 395
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG-KIGCT 380
+Q R++LP++PFREELL AV+ + +L+I GETGSGKTTQIPQYL+E GYT++G KI CT
Sbjct: 396 IQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACT 455
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q +EMGVKLG+EVGYSIRFEDCTS++TVL+YMTDGMLLRE + EP L
Sbjct: 456 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 515
Query: 441 ESYSVLI 447
SYSV++
Sbjct: 516 ASYSVVM 522
Score = 141 (54.7 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 37/124 (29%), Positives = 68/124 (54%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLT--GPKLTWKEEYDAIQRSRKDDG--IENLREVS 203
RL+D ++ R+R+RD TR + K ++E ++ + +D + LR+ S
Sbjct: 175 RLQDLEERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKS 234
Query: 204 RQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSH 263
R++YL KR ++KLE+++ D+E LF +L+ E EL Y++++ DL + R +
Sbjct: 235 RREYLAKREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLARE---YRAAG 291
Query: 264 ESDK 267
E +K
Sbjct: 292 EQEK 295
Score = 55 (24.4 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 40/174 (22%), Positives = 73/174 (41%)
Query: 156 EELERRIRERDVAATRKLTGPKLTWKEE-YDAIQRSRKDDGIENLREVSRQKYLPKRAQK 214
EE +R+R+ D T L+GP + + ++ + R + E + L K
Sbjct: 41 EEFVQRLRDTD---TLDLSGPARDFALKLWNKVPRKAVAEKPARAAEREARALLEKNRSY 97
Query: 215 KLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKAD 274
+L ++D + E E G+ L + ++K L QE + E ++ KK
Sbjct: 98 RL--LEDSEESSE---EAVGRAGSSLQKKRKKRKHLRKKRQEEEEEEEEEEVPEKGKKTT 152
Query: 275 LKYGSK---NKKQQYDDYQY-----VFEIEDKIVDFFRESVELPDKSAVKSALE 320
GSK K + D+++ + ++E++ D F E V DK ++ LE
Sbjct: 153 --GGSKPQTEKPESEDEWERTERERLQDLEER--DAFAERVRQRDKDRTRNVLE 202
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 647 (232.8 bits), Expect = 6.4e-109, Sum P(2) = 6.4e-109
Identities = 126/188 (67%), Positives = 151/188 (80%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
+L D+ RPDLKLLISSAT+DA+ F YF +APIF IP R Y+V++ YT+ PEA+Y+ A
Sbjct: 617 LLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIFNIPGRMYNVDIHYTQQPEANYLAA 676
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTE 564
AI T QIHV++ GDILVFLTGQ++ E AE+ L++ R LG KI E+IICPIY NLP++
Sbjct: 677 AITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSD 736
Query: 565 LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPI 624
LQAKIFEPTP ARKVVLATNIAETSLTIDGI YVIDPGF K +NP+TGMESL+V P
Sbjct: 737 LQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPC 796
Query: 625 SKASANQR 632
S+ASANQR
Sbjct: 797 SRASANQR 804
Score = 466 (169.1 bits), Expect = 6.4e-109, Sum P(2) = 6.4e-109
Identities = 138/408 (33%), Positives = 207/408 (50%)
Query: 61 FAQEIFARVPRKESESKTNTILDAAHYDADDDVIRITASTNKKR--FRKRIGSEDDD-DE 117
FA+ R ++ + + +A D ++ R ++R KR+ S+DD +
Sbjct: 202 FAESPSKRARLEDGSASPRSRASSADLDPEERKERERKRDLEERDALAKRLASKDDKRSK 261
Query: 118 GIASXXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQRGKEELERRIRERDVAATRKLTGPK 177
I LR + +E L++R ER +A R+ +
Sbjct: 262 KIVEDRTKDSEAARRRALADDAKARDAAMPDLRLRSRQEYLKKRETER-LALLRRQVAEE 320
Query: 178 LTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKEN-LFEGQKLT 236
E + R K++ N REV R +R ++++ +D E+ + E K+
Sbjct: 321 TQELRENPNLTRREKEEFARN-REVLR--IAEERL--RIDDHRDGYMMPEDYITEKGKID 375
Query: 237 GAELCELDYEKKI-LDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYD--DYQYVF 293
+ + Y++ + D +GQE E + +Q KA + N+ + D DY+YVF
Sbjct: 376 RKKKEDALYKRYVERDELGQEKFITEHEEWEMEQTAKAKAQI---NRAEFVDEGDYEYVF 432
Query: 294 EIEDKI---VD---------FFRESVELPDK-SAVKSALEMLQEERKTLPIYPFREELLQ 340
+ +I +D +E L +K + + +++ RK LPIY FR++++Q
Sbjct: 433 DDTQRINFTMDAQMKGTRKLMTQEQRMLQEKLDQAEQKAQTIEDTRKKLPIYQFRDQIIQ 492
Query: 341 AVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG-KIGCTQLXXXXXXXXXXXXXQEMG 399
AV ++ VL+IVGETGSGKTTQ+PQYL+EAGYTK G K+GCTQ +EMG
Sbjct: 493 AVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCTQPRRVAAMSVAARVAEEMG 552
Query: 400 VKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
VKLG+EVGYSIRFED TSDKTVLKYMTDGMLLRE++ EP L YS L+
Sbjct: 553 VKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQYSALM 600
Score = 145 (56.1 bits), Expect = 6.9e-80, Sum P(3) = 6.9e-80
Identities = 35/116 (30%), Positives = 62/116 (53%)
Query: 5 DNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETRAFAQE 64
DN +T+VSD L+ L S P VV +++ + A SS+ L+ K+ F + E +F E
Sbjct: 2 DN-RTFVSDSLLRLANASDPTVVDFILATATSAKSSSSLQDKIAPFLDAGAEEVSSFCSE 60
Query: 65 IFARVPRKESESKTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGIA 120
++ RV + E+ + TN + + D + A T KK++R + ++ D EG++
Sbjct: 61 LYKRVGKSETSAITNAGTGSGNRDGKT----VAAGTEKKKYRL-LDMDEVDYEGVS 111
Score = 67 (28.6 bits), Expect = 6.9e-80, Sum P(3) = 6.9e-80
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 157 ELERRIRERDVA-ATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKK 215
E ER+ R R +R G + + +D + +++ EN R+ R K L +R
Sbjct: 123 ETERKDRGRRAHDKSRDGDGNSKSHSDRWDKNENRKRER--ENSRDRRRSKKLRRR---D 177
Query: 216 LEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSH-ESDKQQRKKAD 274
+++ +DR D+E L E ++ E E ++ L+ R S + D ++RK+ +
Sbjct: 178 VDDFEDRWGDEEILEEEEQDVEGEFAESPSKRARLEDGSASPRSRASSADLDPEERKERE 237
Query: 275 LK 276
K
Sbjct: 238 RK 239
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 640 (230.4 bits), Expect = 6.0e-107, Sum P(2) = 6.0e-107
Identities = 123/186 (66%), Positives = 147/186 (79%)
Query: 448 DLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIV 507
DL R DLKLLISSAT++AE F+ YF APIF IP RRY V+++YT APEA+Y+ AAI
Sbjct: 512 DLARERKDLKLLISSATMNAEKFASYFDDAPIFNIPGRRYPVDIYYTPAPEANYLSAAIT 571
Query: 508 TALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQA 567
T QIH +P GDIL+FLTGQD+ E AE + + R LG+++ EL+ICPIY NLP+ELQ+
Sbjct: 572 TVFQIHTTQPKGDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQS 631
Query: 568 KIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKA 627
KIFEPTPE ARKVVLATNIAETSLTIDGI YVIDPG+ K YNP TGM +L+V P S+A
Sbjct: 632 KIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRA 691
Query: 628 SANQRT 633
SANQR+
Sbjct: 692 SANQRS 697
Score = 450 (163.5 bits), Expect = 6.0e-107, Sum P(2) = 6.0e-107
Identities = 119/317 (37%), Positives = 178/317 (56%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYL 208
LR++ +E ++R E+ +A RK + A+ K + EN + ++ +
Sbjct: 186 LRERSRQEYFKKRETEK-IALFRKQVAEETAELRSGVALSEKEKAEFAENRKLLA---LI 241
Query: 209 PKRAQKKLEEIKDRTKDKEN-LFEGQKLTGAELCELDYEKKI-LDLVGQEGLQRCSHESD 266
+R ++++ +D E+ + E K+ + + Y++ + D GQE E +
Sbjct: 242 EERL--RIDDHRDGYYMPEDYITEKGKIDRKKKEDALYKRYVEKDEYGQEKFVTEHEEWE 299
Query: 267 KQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEM----- 321
++Q KA K K ++ Y YV + ED+ + + R++ LP + V + ++
Sbjct: 300 REQAAKA--KAQIKVAERDEAGYDYVMD-EDQYIQWTRDT-RLPGEGKVLTGEQLYLQAQ 355
Query: 322 ----------LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGY 371
+QE RK+LPIY +R+E L A+ +Y +LVIVGETGSGKTTQ+PQYL+EAGY
Sbjct: 356 IDAAEKRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGY 415
Query: 372 TKQG-KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGML 430
TK G ++GCTQ EMGVK+G+EVGYSIRFED TSDKT+LKYMTDGML
Sbjct: 416 TKDGMRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGML 475
Query: 431 LREIVLEPSLESYSVLI 447
LRE + EP L SYS L+
Sbjct: 476 LREFMTEPDLSSYSALM 492
Score = 116 (45.9 bits), Expect = 1.0e-71, Sum P(2) = 1.0e-71
Identities = 49/186 (26%), Positives = 87/186 (46%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDG------IENLREVS 203
RD+ +E R++ERD ++K G K ++ +++RS DD + +LRE S
Sbjct: 136 RDRAEREAFSNRLKERDDGRSKK--GGK---EDLATSLRRSLADDAKGRSEAVADLRERS 190
Query: 204 RQKYLPKRAQKKLEEIKDRTKDKE-NLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCS 262
RQ+Y KR +K+ + + ++ L G L+ E E +K+L L+ +E L+
Sbjct: 191 RQEYFKKRETEKIALFRKQVAEETAELRSGVALSEKEKAEFAENRKLLALI-EERLRIDD 249
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDD-YQ-YVFEIEDKIVDFFRESVELPDKSAVKSALE 320
H + + G ++K++ D Y+ YV + E F E E + A K+ +
Sbjct: 250 HRDGYYMPEDYITEKGKIDRKKKEDALYKRYVEKDEYGQEKFVTEHEEWEREQAAKAKAQ 309
Query: 321 MLQEER 326
+ ER
Sbjct: 310 IKVAER 315
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 592 (213.5 bits), Expect = 4.7e-102, Sum P(4) = 4.7e-102
Identities = 111/191 (58%), Positives = 153/191 (80%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + RP+LK+LI+SATL+AE FS YF +A +F IP R + V++ YTK PEADY+
Sbjct: 641 FGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYL 700
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH++EP GDIL+FLTGQ++ + A +IL +R + LG+ + +LII P+Y LP
Sbjct: 701 DASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALP 760
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q KIFEP P G+RKVV+ATNIAETSLTIDGI YVIDPGF+K K +NPK GM+SL+V
Sbjct: 761 SEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVA 820
Query: 623 PISKASANQRT 633
PIS+A+A QR+
Sbjct: 821 PISQAAARQRS 831
Score = 400 (145.9 bits), Expect = 4.7e-102, Sum P(4) = 4.7e-102
Identities = 74/132 (56%), Positives = 100/132 (75%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ ++E+R++LPI+P RE LQAVSE+ +LV++GETGSGKTTQ+ QYL EAGY +G
Sbjct: 495 KATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRG 554
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G +LG EVGY+IRFEDCTS +T++K+MTDG+LLRE +
Sbjct: 555 KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614
Query: 436 LEPSLESYSVLI 447
L+P+L +YSV+I
Sbjct: 615 LDPNLSAYSVII 626
Score = 57 (25.1 bits), Expect = 4.7e-102, Sum P(4) = 4.7e-102
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 243 LDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIED 297
+D EK +L ++ Q E +++QR+K D +NK+++ D +++I D
Sbjct: 154 IDDEKTKEELKRKQ--QDMDREFEREQREKRDRDREQQNKRREIDKEPILYKIYD 206
Score = 45 (20.9 bits), Expect = 4.7e-102, Sum P(4) = 4.7e-102
Identities = 14/75 (18%), Positives = 34/75 (45%)
Query: 7 LKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEF--EFSSTTETRAFAQE 64
L++ V ++L +G + ++VIGL+ + D + E +F + + F
Sbjct: 9 LESQVCNELERFIGSGDKLLAEFVIGLADENPKLKDFNKAISENVPDFPESLSSHLF--N 66
Query: 65 IFARVPRKESESKTN 79
+ ++ +K + + N
Sbjct: 67 LIEKMKKKTTTTTNN 81
Score = 44 (20.5 bits), Expect = 1.1e-100, Sum P(4) = 1.1e-100
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 151 DQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPK 210
D++ KEEL+R+ ++ D R+ K + D Q++++ RE+ ++ L K
Sbjct: 156 DEKTKEELKRKQQDMDREFEREQRE-----KRDRDREQQNKR-------REIDKEPILYK 203
Query: 211 RAQKKLEEIKD 221
K+ I D
Sbjct: 204 IYDGKVSSIND 214
Score = 43 (20.2 bits), Expect = 9.4e-65, Sum P(4) = 9.4e-65
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQY--LYEAGYTKQGK 376
EM+ K L + P+ + + +A + I G G T+IP++ + + + + GK
Sbjct: 438 EMMDSIPKDLSL-PWHDPMPEAGERHLAQEIRSIAGQGIDTEIPEWKKVTQGSHIQYGK 495
Score = 38 (18.4 bits), Expect = 4.6e-100, Sum P(4) = 4.6e-100
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 208 LPKRAQKKLEEIKDRTKDKENLFEGQK 234
+P +K EE+K + +D + FE ++
Sbjct: 152 VPIDDEKTKEELKRKQQDMDREFEREQ 178
Score = 37 (18.1 bits), Expect = 5.8e-100, Sum P(4) = 5.8e-100
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 194 DGIENLREVSR-QKYLPKRAQKKLEEIKDRTKDKEN 228
D + E+ R Q+ + + +++ E +DR ++++N
Sbjct: 155 DDEKTKEELKRKQQDMDREFEREQREKRDRDREQQN 190
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 596 (214.9 bits), Expect = 2.9e-100, Sum P(4) = 2.9e-100
Identities = 108/190 (56%), Positives = 149/190 (78%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + RPDL+L+++SATLDA+ FS+YF PIF IP R + VE+ Y+K PE+DY+
Sbjct: 710 FGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSIPGRTFPVEIMYSKEPESDYL 769
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+AA++T +QIH+ EP GD+L+FLTGQ++ +TA EIL +R + LG + EL+I P+Y LP
Sbjct: 770 DAALITVMQIHLTEPPGDMLLFLTGQEEIDTACEILYERMKALGPSVPELVILPVYSALP 829
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q++IF+P P G RKVV+ATNIAETS+TID I YVIDPGF K K+Y+PK GM+SL+V
Sbjct: 830 SEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVT 889
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 890 PISQAQAKQR 899
Score = 378 (138.1 bits), Expect = 2.9e-100, Sum P(4) = 2.9e-100
Identities = 68/126 (53%), Positives = 97/126 (76%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQ 381
++++R++LP+Y FR++LL+AV+E +L++VG+TGSGKTTQ+ QYL EAG+ +G IGCTQ
Sbjct: 570 IKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKGIIGCTQ 629
Query: 382 LXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLE 441
+E+G KLG EVGY+IRFEDCTS +T +KYMTDGML RE++L+P L+
Sbjct: 630 PRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLK 689
Query: 442 SYSVLI 447
YSV++
Sbjct: 690 KYSVIM 695
Score = 57 (25.1 bits), Expect = 2.9e-100, Sum P(4) = 2.9e-100
Identities = 20/107 (18%), Positives = 48/107 (44%)
Query: 11 VSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEF--EFSSTTETRAFAQEIFAR 68
++++L + LG S + +Y+I + S A+ ++ L+ + + + + +
Sbjct: 16 ITNELQNHLGVSDKVLAEYIIEQHLKCSSFAEFKSALEAMGGDLFPMSLMESVDRLVLTM 75
Query: 69 VPRKESESKTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDD 115
PR ++++K + + A DD+ + A K R K + D +
Sbjct: 76 HPRYKNKNKKDRGDEHVENGASDDMDALNALEKKARVFKGLAVPDQE 122
Score = 49 (22.3 bits), Expect = 2.9e-100, Sum P(4) = 2.9e-100
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 265 SDKQQRKKADLKYGSKNKKQQYDDYQYVFEIED 297
S++++R++AD Y K + DD +++I D
Sbjct: 246 SERRRRRRADEDYFRKPPPVELDDSPVLYKIYD 278
Score = 46 (21.3 bits), Expect = 4.3e-96, Sum P(3) = 4.3e-96
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 178 LTWKEEY-DAIQRSRKDDGIEN--LREVSRQKYLPKRAQK-KLEEIKDRTK---DKENLF 230
LT Y + ++ R D+ +EN ++ L K+A+ K + D+ ++E +
Sbjct: 73 LTMHPRYKNKNKKDRGDEHVENGASDDMDALNALEKKARVFKGLAVPDQEPGWAEEEYME 132
Query: 231 EGQKLTGAELCELDYEKKILD-----LVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQ 285
G K G + E D + +D L G G R + + R + K S+++ +
Sbjct: 133 VGNK-NGLGVDEHDAKDSAMDDTFAMLEGLAGKARAKTTTITESRPVSKRKR-SRSRSPE 190
Query: 286 YDDY 289
YDDY
Sbjct: 191 YDDY 194
Score = 41 (19.5 bits), Expect = 1.5e-95, Sum P(3) = 1.5e-95
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 194 DGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLV 253
D +++L +S + Q L + D+ E + E Q L + E K L+ +
Sbjct: 2 DDLQSLEHLSLISRITNELQNHLG-VSDKVL-AEYIIE-QHLKCSSFAEF---KSALEAM 55
Query: 254 GQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDY 289
G + ES + +Y +KNKK + D++
Sbjct: 56 GGDLFPMSLMESVDRLVLTMHPRYKNKNKKDRGDEH 91
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 596 (214.9 bits), Expect = 7.4e-98, Sum P(3) = 7.4e-98
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 698 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 757
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 758 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 817
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 818 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 877
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 878 PISQAQAKQR 887
Score = 387 (141.3 bits), Expect = 7.4e-98, Sum P(3) = 7.4e-98
Identities = 72/132 (54%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ + +L E+R++LPIY +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 553 KTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 611
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 612 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 671
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 672 IDPDLTQYAIIM 683
Score = 52 (23.4 bits), Expect = 7.4e-98, Sum P(3) = 7.4e-98
Identities = 25/110 (22%), Positives = 43/110 (39%)
Query: 182 EEYDAIQRSRKDDGIENLREVS-RQKYLPKRAQKKLEEIKDRTKDKE-NLFEGQKLTGAE 239
+E +A+ S G E R+ R + K+ + + +DR +D+E N K
Sbjct: 147 KELEALMPSAA--GQEKQRDAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRRHRS 204
Query: 240 LCELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDY 289
+ + V R +S + RK D KYG +N + D +
Sbjct: 205 RSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRD-KYGERNLDRWRDKH 253
Score = 45 (20.9 bits), Expect = 4.0e-97, Sum P(3) = 4.0e-97
Identities = 18/79 (22%), Positives = 36/79 (45%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKY 207
R RD+ + + + R R + +R T + K Y + RSR ++ ++ R KY
Sbjct: 186 RDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRS--RSRSQSPPKDRKD--RDKY 241
Query: 208 LPKRAQKKLEEIKDRTKDK 226
++ L+ +D+ D+
Sbjct: 242 ----GERNLDRWRDKHVDR 256
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 596 (214.9 bits), Expect = 9.9e-98, Sum P(3) = 9.9e-98
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 698 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 757
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 758 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 817
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 818 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 877
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 878 PISQAQAKQR 887
Score = 387 (141.3 bits), Expect = 9.9e-98, Sum P(3) = 9.9e-98
Identities = 72/132 (54%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ + +L E+R++LPIY +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 553 KTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 611
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 612 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 671
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 672 IDPDLTQYAIIM 683
Score = 52 (23.4 bits), Expect = 9.9e-98, Sum P(3) = 9.9e-98
Identities = 25/110 (22%), Positives = 43/110 (39%)
Query: 182 EEYDAIQRSRKDDGIENLREVS-RQKYLPKRAQKKLEEIKDRTKDKE-NLFEGQKLTGAE 239
+E +A+ S G E R+ R + K+ + + +DR +D+E N K
Sbjct: 147 KELEALMPSAA--GQEKQRDAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRRHRS 204
Query: 240 LCELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDY 289
+ + V R +S + RK D KYG +N + D +
Sbjct: 205 RSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRD-KYGERNLDRWRDKH 253
Score = 45 (20.9 bits), Expect = 5.4e-97, Sum P(3) = 5.4e-97
Identities = 18/79 (22%), Positives = 36/79 (45%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKY 207
R RD+ + + + R R + +R T + K Y + RSR ++ ++ R KY
Sbjct: 186 RDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRS--RSRSQSPPKDRKD--RDKY 241
Query: 208 LPKRAQKKLEEIKDRTKDK 226
++ L+ +D+ D+
Sbjct: 242 ----GERNLDRWRDKHVDR 256
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 596 (214.9 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 722 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 781
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 782 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 841
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 842 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 901
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 902 PISQAQAKQR 911
Score = 387 (141.3 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 72/132 (54%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ + +L E+R++LPIY +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 577 KTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 635
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 636 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 695
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 696 IDPDLTQYAIIM 707
Score = 51 (23.0 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 18/79 (22%), Positives = 36/79 (45%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKY 207
R RD+ E + + R R + + T + K Y + RSR ++ ++ R+KY
Sbjct: 210 RERDRERDRERDHKRRHRSRSRSHSRTRERTKGKSRYRS--RSRSQSPFKDRKD--REKY 265
Query: 208 LPKRAQKKLEEIKDRTKDK 226
++ L+ +D+ D+
Sbjct: 266 ----GERNLDRWRDKHVDR 280
Score = 43 (20.2 bits), Expect = 1.0e-96, Sum P(3) = 1.0e-96
Identities = 23/104 (22%), Positives = 42/104 (40%)
Query: 188 QRSR-KDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYE 246
+RSR +D + R+ R + + K E +DR +D+E E +
Sbjct: 175 KRSRSRDRDRDRDRDRDRDRDRDRDRDKDRERDRDRERDRERDRERDHKRRHRSRSRSHS 234
Query: 247 KKILDLVGQEGLQ-RCSHESDKQQRKKADLKYGSKNKKQQYDDY 289
+ G+ + R +S + RK + KYG +N + D +
Sbjct: 235 RTRERTKGKSRYRSRSRSQSPFKDRKDRE-KYGERNLDRWRDKH 277
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 602 (217.0 bits), Expect = 1.8e-97, Sum P(3) = 1.8e-97
Identities = 113/190 (59%), Positives = 148/190 (77%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + RP+LKL+++SATLDA FS YF APIF IP R + VE+ YTK PE DY+
Sbjct: 719 FGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYL 778
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDIL+FLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 779 DASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 838
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTGM+SL+V
Sbjct: 839 SEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVT 898
Query: 623 PISKASANQR 632
PIS+A+A QR
Sbjct: 899 PISQAAAKQR 908
Score = 383 (139.9 bits), Expect = 1.8e-97, Sum P(3) = 1.8e-97
Identities = 70/126 (55%), Positives = 96/126 (76%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQ 381
L E+R++LPIY R++L++AV++ +L+++GETGSGKTTQI QYL E G+T +GKIGCTQ
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQ 638
Query: 382 LXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLE 441
+E G +LG EVGY+IRFEDCTS +T++KYMTDGMLLRE ++E L+
Sbjct: 639 PRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELK 698
Query: 442 SYSVLI 447
SYSV++
Sbjct: 699 SYSVIM 704
Score = 48 (22.0 bits), Expect = 1.8e-97, Sum P(3) = 1.8e-97
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
++ ++ +RR R+RD T++ + + ++ + +RSR D R SR
Sbjct: 167 KEVSSRDRHKRRSRDRD---TKRRSRSR---EDRHSDRRRSRSRDKERRRRSRSRDN--- 217
Query: 210 KRAQKKLEEIKDRTKDKEN 228
R + + E +DR +D+ +
Sbjct: 218 -RRRSRSREDRDRDRDRRH 235
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 589 (212.4 bits), Expect = 2.4e-97, Sum P(3) = 2.4e-97
Identities = 112/190 (58%), Positives = 147/190 (77%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L L+ R DL+L+++SATLDAE FS YF + IF IP R + VE+ YTK PE DY+
Sbjct: 648 FGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYL 707
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+AA++T LQIH+ EP GDILVFLTGQ++ ++A + L +R +GLG + ELII P+Y LP
Sbjct: 708 DAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALP 767
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q++IF+P P G RKVV+ATNIAE SLTIDGI YV+DPGFAK YNPK G+ESL++
Sbjct: 768 SEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVIT 827
Query: 623 PISKASANQR 632
PIS+ASA QR
Sbjct: 828 PISQASAKQR 837
Score = 393 (143.4 bits), Expect = 2.4e-97, Sum P(3) = 2.4e-97
Identities = 73/126 (57%), Positives = 95/126 (75%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQ 381
+QE+R++LPIY ++EL+QAV + VLV++GETGSGKTTQ+ QYL EAGYT +GKIGCTQ
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567
Query: 382 LXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLE 441
+E G +LG EVGY+IRFEDCT TV+KYMTDGMLLREI+++ +L
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 442 SYSVLI 447
YSV++
Sbjct: 628 QYSVIM 633
Score = 48 (22.0 bits), Expect = 2.4e-97, Sum P(3) = 2.4e-97
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 149 LRDQRGK-EELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENL-REVSRQK 206
++D + K +ELE+ I ER+ R+ + + D + R D N R+ R +
Sbjct: 100 IKDTKDKVKELEKEI-EREAEERRR----EEDRNRDRDRRESGRDRDRDRNRDRDDRRDR 154
Query: 207 YLPKRAQKKLEEIKDRTKDKENLFEGQ 233
+ + + EE +DR D+ + G+
Sbjct: 155 HRDRERNRGDEEGEDRRSDRRHRERGR 181
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 596 (214.9 bits), Expect = 2.4e-97, Sum P(3) = 2.4e-97
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 667 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 726
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 727 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 786
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 787 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 846
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 847 PISQAQAKQR 856
Score = 387 (141.3 bits), Expect = 2.4e-97, Sum P(3) = 2.4e-97
Identities = 72/132 (54%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ + +L E+R++LPIY +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 522 KTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 580
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 581 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 640
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 641 IDPDLTQYAIIM 652
Score = 48 (22.0 bits), Expect = 2.4e-97, Sum P(3) = 2.4e-97
Identities = 17/79 (21%), Positives = 36/79 (45%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKY 207
R RD+ + + + R R + + T + K Y + RSR ++ ++ R+KY
Sbjct: 155 RERDRERDRDRDHKRRHRSRSRSHSRTRERAKGKSRYRS--RSRSQSPFKDRKD--REKY 210
Query: 208 LPKRAQKKLEEIKDRTKDK 226
++ L+ +D+ D+
Sbjct: 211 ----GERNLDRWRDKHVDR 225
Score = 41 (19.5 bits), Expect = 1.3e-96, Sum P(3) = 1.3e-96
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 188 QRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKE 227
+RSR D + R+ R + + K E +DR +D+E
Sbjct: 122 KRSRSRDRDRD-RDRDRDRDRDRDRDKDRERDRDRERDRE 160
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 596 (214.9 bits), Expect = 2.8e-97, Sum P(3) = 2.8e-97
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 646 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 705
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 706 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 765
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 766 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 825
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 826 PISQAQAKQR 835
Score = 383 (139.9 bits), Expect = 2.8e-97, Sum P(3) = 2.8e-97
Identities = 71/132 (53%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ L ++ E+R++LPI+ +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 501 KTQLSII-EQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 559
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 560 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 619
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 620 IDPDLTQYAIIM 631
Score = 50 (22.7 bits), Expect = 2.8e-97, Sum P(3) = 2.8e-97
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R R + +R+ R R + +R T + K Y + RSR + R+ R KYL
Sbjct: 169 RRSRSRSR-DRKRRHRSRSRSRSRTRDRNRGKSRYYSRSRSRSPS--RDRRD--RDKYLE 223
Query: 210 KRAQKKLEEIKDRTKDKE 227
+ ++ ++ DR +E
Sbjct: 224 RSNERWRDKHVDRPPPEE 241
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 596 (214.9 bits), Expect = 3.0e-97, Sum P(3) = 3.0e-97
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 720 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 779
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 780 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 839
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 840 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 899
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 900 PISQAQAKQR 909
Score = 387 (141.3 bits), Expect = 3.0e-97, Sum P(3) = 3.0e-97
Identities = 72/132 (54%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ + +L E+R++LPIY +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 575 KTQMSIL-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 633
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 634 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 693
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 694 IDPDLTQYAIIM 705
Score = 48 (22.0 bits), Expect = 3.0e-97, Sum P(3) = 3.0e-97
Identities = 17/79 (21%), Positives = 36/79 (45%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKY 207
R RD+ + + + R R + + T + K Y + RSR ++ ++ R+KY
Sbjct: 208 RERDRERDRDRDHKRRHRSRSRSHSRTRERAKGKSRYRS--RSRSQSPFKDRKD--REKY 263
Query: 208 LPKRAQKKLEEIKDRTKDK 226
++ L+ +D+ D+
Sbjct: 264 ----GERNLDRWRDKHVDR 278
Score = 41 (19.5 bits), Expect = 1.7e-96, Sum P(3) = 1.7e-96
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 188 QRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKE 227
+RSR D + R+ R + + K E +DR +D+E
Sbjct: 175 KRSRSRDRDRD-RDRDRDRDRDRDRDKDRERDRDRERDRE 213
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 596 (214.9 bits), Expect = 5.1e-97, Sum P(3) = 5.1e-97
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 690 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 749
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 750 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 809
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 810 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 869
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 870 PISQAQAKQR 879
Score = 385 (140.6 bits), Expect = 5.1e-97, Sum P(3) = 5.1e-97
Identities = 71/132 (53%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ + ++ E+R++LPIY +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 545 KTQMSII-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 603
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 604 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 663
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 664 IDPDLTQYAIIM 675
Score = 47 (21.6 bits), Expect = 5.1e-97, Sum P(3) = 5.1e-97
Identities = 24/109 (22%), Positives = 46/109 (42%)
Query: 182 EEYDAIQRSRKDDGIENLREVS-RQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAEL 240
+E +A+ S G E R+ R K K+ ++ + +DR +D+++ + + +
Sbjct: 147 KELEALMPSAA--GQERHRDTEHRDKTKKKKRSRERDRDRDRERDRDHKRRHRSRSRSRT 204
Query: 241 CELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDY 289
E + K R +S + RK D KYG +N + D +
Sbjct: 205 RERNKGKS-------RYRSRSRSQSPPRDRKDRD-KYGERNLDRWRDKH 245
Score = 47 (21.6 bits), Expect = 5.1e-97, Sum P(3) = 5.1e-97
Identities = 42/231 (18%), Positives = 86/231 (37%)
Query: 6 NLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQE--FEFSSTTETRAFAQ 63
+L + V +L + LG + + ++VI L+++ + + L + EF+ + +
Sbjct: 29 SLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNLLRL 88
Query: 64 EIFARVPRKESESKTNTILDAAHYDADDDVIRITASTNKKRFRKRIGSEDDDDEGIASXX 123
R P K S SK + + ++ + + R + D+DD +A
Sbjct: 89 IQTMRPPAKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTML---DEDDVKVAVDV 145
Query: 124 XXXXXXXXXXXXXXXXXXXXXXXXRLRDQRGKEELER-RIRERDV-------AATRKLTG 175
+ + ++ E +R R RERD + +R T
Sbjct: 146 LKELEALMPSAAGQERHRDTEHRDKTKKKKRSRERDRDRDRERDRDHKRRHRSRSRSRTR 205
Query: 176 PKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDK 226
+ K Y + RSR + ++ R KY ++ L+ +D+ D+
Sbjct: 206 ERNKGKSRYRS--RSRSQSPPRDRKD--RDKY----GERNLDRWRDKHVDR 248
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 590 (212.7 bits), Expect = 1.4e-96, Sum P(3) = 1.4e-96
Identities = 108/190 (56%), Positives = 148/190 (77%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+++L RPDLK++++SATLDA+ FS YF PIF IP R + VE+ Y+K PE+DY+
Sbjct: 675 FALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDYL 734
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+AA+ T +QIH++EP GDIL+FLTGQ++ +T+ EIL +R + LG + ELII P+Y LP
Sbjct: 735 DAALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALP 794
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
E+Q++IF+P P G+RKVV+ATNIAETS+TID I YV+DPGF K +Y+PK GM+SL+V
Sbjct: 795 NEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVT 854
Query: 623 PISKASANQR 632
PIS+A ANQR
Sbjct: 855 PISQAQANQR 864
Score = 380 (138.8 bits), Expect = 1.4e-96, Sum P(3) = 1.4e-96
Identities = 70/145 (48%), Positives = 104/145 (71%)
Query: 303 FRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQI 362
+R+++ ++S K ++++R++LP++ FRE+L++AV E ++++VGETGSGKTTQ+
Sbjct: 516 WRQAIAPKNQSFGKRTNMTIKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQL 575
Query: 363 PQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVL 422
QYL EAG+ +G IGCTQ +E+G +LG EVGY+IRFEDCTS T +
Sbjct: 576 TQYLAEAGFANEGVIGCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRI 635
Query: 423 KYMTDGMLLREIVLEPSLESYSVLI 447
KYMTDGML REIV++P L+ YSV++
Sbjct: 636 KYMTDGMLQREIVIDPDLKRYSVIM 660
Score = 54 (24.1 bits), Expect = 1.4e-96, Sum P(3) = 1.4e-96
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDDY 289
+ S + R + +YG ++++ +YDDY
Sbjct: 188 YRSRSRSRSRGKDQYGRRSRRDKYDDY 214
Score = 46 (21.3 bits), Expect = 9.5e-96, Sum P(3) = 9.5e-96
Identities = 29/97 (29%), Positives = 40/97 (41%)
Query: 181 KEEYDAIQRSRKDDGIENLREVSRQKYLPKRA---QKKLEEIKDRTKDKENLFEGQKLTG 237
KE+Y + RSR + R R KY QK + D T + +++G +TG
Sbjct: 185 KEQYRSRSRSRSRGKDQYGRRSRRDKYDDYNDGYDQKPARQDLDDTPVLQKVYDGH-VTG 243
Query: 238 AE----LCELDYEK-KILDLVGQEGL---QRCSHESD 266
+ L K K+ LV L QR SH SD
Sbjct: 244 VKDFGAFVNLHGVKGKVDGLVHVSALTDGQRVSHPSD 280
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 596 (214.9 bits), Expect = 1.9e-96, Sum P(3) = 1.9e-96
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 708 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 767
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 768 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 827
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 828 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 887
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 888 PISQAQAKQR 897
Score = 385 (140.6 bits), Expect = 1.9e-96, Sum P(3) = 1.9e-96
Identities = 71/132 (53%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ + ++ E+R++LPIY +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 563 KTQMSII-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 621
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 622 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 681
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 682 IDPDLTQYAIIM 693
Score = 42 (19.8 bits), Expect = 1.9e-96, Sum P(3) = 1.9e-96
Identities = 24/109 (22%), Positives = 41/109 (37%)
Query: 182 EEYDAIQRSRKDDGIENLREVS-RQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAEL 240
+E +A+ S G E R+ R K K+ + E +DR +++E K
Sbjct: 159 KELEALMPSAA--GQEKHRDTEHRDKAKKKKRSRSRERDRDRERERER-DRDHKRRHRSR 215
Query: 241 CELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDY 289
+ + R +S + RK D KYG +N + D +
Sbjct: 216 SRSRSRTRDRNKGKSRYRSRSRSQSPPRDRKDRD-KYGDRNLDRWRDKH 263
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 602 (217.0 bits), Expect = 7.0e-95, Sum P(3) = 7.0e-95
Identities = 111/181 (61%), Positives = 147/181 (81%)
Query: 453 RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQI 512
RP+LKL+I+SATLD+ FS+YF APIF IP R + VE+ YT+ PE+DY+EAA +T +QI
Sbjct: 683 RPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQI 742
Query: 513 HVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEP 572
H+ EP GD+LVFLTGQ++ +T+ E+L +R + +G + ELII P+YG LP+E+Q +IF+P
Sbjct: 743 HLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDP 802
Query: 573 TPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
P G RKVV+ATNIAETSLTIDGI YV+DPGF K K YNPK+GM+SL+V PIS+A+A QR
Sbjct: 803 APAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQR 862
Query: 633 T 633
+
Sbjct: 863 S 863
Score = 354 (129.7 bits), Expect = 7.0e-95, Sum P(3) = 7.0e-95
Identities = 66/132 (50%), Positives = 95/132 (71%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
++ L M+ E+R++LPI+ ++ L++A+ + +LV+VGETGSGKTTQ+ QY EAG ++G
Sbjct: 528 RTNLSMV-EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRG 586
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G KLG +VGY+IRFEDCTS T++KYMTDGMLLRE +
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 436 LEPSLESYSVLI 447
++P L YS+++
Sbjct: 647 IDPDLSGYSLIM 658
Score = 51 (23.0 bits), Expect = 7.0e-95, Sum P(3) = 7.0e-95
Identities = 37/179 (20%), Positives = 68/179 (37%)
Query: 26 VVQYVIGLSKQALSSADLETKLQEFEFSSTTETRAFAQEIFARVPRKESESKTNTILDAA 85
+VQ + + K+ D + +++ T + A +EI AR+P + + NT +
Sbjct: 69 IVQSMTAVKKKNKKGGDSKEDIKD-SHKITLISDA-KEEIKARLP---ALAMANTAKEKE 123
Query: 86 HYDADDDVI-RITASTNKKRFRKRIGSEDDDDEGIASXXXXXXXXXXXXXXXXXXXXXXX 144
D +DD++ ++ + KR+ E D
Sbjct: 124 --DNEDDLMAQLEKMEGRYESEKRLQKESDSKRN----RSRSRSRSRDRKRRRSRSGDRD 177
Query: 145 XXXRLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVS 203
R R + + + +RR R+RD R G + + D +R R+DDG EV+
Sbjct: 178 RRRRSRSREDRRDRDRRDRDRDRDRGR---GDRRGDDRQRD--RRDRRDDGGARKSEVA 231
Score = 42 (19.8 bits), Expect = 6.2e-94, Sum P(3) = 6.2e-94
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 251 DLVGQEGLQRCSHESDKQQRKKADLKYG-SKNKKQQYD 287
DL+ Q +ES+K+ +K++D K S+++ + D
Sbjct: 128 DLMAQLEKMEGRYESEKRLQKESDSKRNRSRSRSRSRD 165
Score = 38 (18.4 bits), Expect = 1.6e-93, Sum P(3) = 1.6e-93
Identities = 8/39 (20%), Positives = 21/39 (53%)
Query: 188 QRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDK 226
+ +DD + L ++ + KR QK+ + ++R++ +
Sbjct: 122 KEDNEDDLMAQLEKMEGRYESEKRLQKESDSKRNRSRSR 160
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 602 (217.0 bits), Expect = 7.0e-95, Sum P(3) = 7.0e-95
Identities = 111/181 (61%), Positives = 147/181 (81%)
Query: 453 RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQI 512
RP+LKL+I+SATLD+ FS+YF APIF IP R + VE+ YT+ PE+DY+EAA +T +QI
Sbjct: 683 RPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQI 742
Query: 513 HVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEP 572
H+ EP GD+LVFLTGQ++ +T+ E+L +R + +G + ELII P+YG LP+E+Q +IF+P
Sbjct: 743 HLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDP 802
Query: 573 TPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
P G RKVV+ATNIAETSLTIDGI YV+DPGF K K YNPK+GM+SL+V PIS+A+A QR
Sbjct: 803 APAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQR 862
Query: 633 T 633
+
Sbjct: 863 S 863
Score = 354 (129.7 bits), Expect = 7.0e-95, Sum P(3) = 7.0e-95
Identities = 66/132 (50%), Positives = 95/132 (71%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
++ L M+ E+R++LPI+ ++ L++A+ + +LV+VGETGSGKTTQ+ QY EAG ++G
Sbjct: 528 RTNLSMV-EQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRG 586
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G KLG +VGY+IRFEDCTS T++KYMTDGMLLRE +
Sbjct: 587 KIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECL 646
Query: 436 LEPSLESYSVLI 447
++P L YS+++
Sbjct: 647 IDPDLSGYSLIM 658
Score = 51 (23.0 bits), Expect = 7.0e-95, Sum P(3) = 7.0e-95
Identities = 37/179 (20%), Positives = 68/179 (37%)
Query: 26 VVQYVIGLSKQALSSADLETKLQEFEFSSTTETRAFAQEIFARVPRKESESKTNTILDAA 85
+VQ + + K+ D + +++ T + A +EI AR+P + + NT +
Sbjct: 69 IVQSMTAVKKKNKKGGDSKEDIKD-SHKITLISDA-KEEIKARLP---ALAMANTAKEKE 123
Query: 86 HYDADDDVI-RITASTNKKRFRKRIGSEDDDDEGIASXXXXXXXXXXXXXXXXXXXXXXX 144
D +DD++ ++ + KR+ E D
Sbjct: 124 --DNEDDLMAQLEKMEGRYESEKRLQKESDSKRN----RSRSRSRSRDRKRRRSRSGDRD 177
Query: 145 XXXRLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVS 203
R R + + + +RR R+RD R G + + D +R R+DDG EV+
Sbjct: 178 RRRRSRSREDRRDRDRRDRDRDRDRGR---GDRRGDDRQRD--RRDRRDDGGARKSEVA 231
Score = 42 (19.8 bits), Expect = 6.2e-94, Sum P(3) = 6.2e-94
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 251 DLVGQEGLQRCSHESDKQQRKKADLKYG-SKNKKQQYD 287
DL+ Q +ES+K+ +K++D K S+++ + D
Sbjct: 128 DLMAQLEKMEGRYESEKRLQKESDSKRNRSRSRSRSRD 165
Score = 38 (18.4 bits), Expect = 1.6e-93, Sum P(3) = 1.6e-93
Identities = 8/39 (20%), Positives = 21/39 (53%)
Query: 188 QRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDK 226
+ +DD + L ++ + KR QK+ + ++R++ +
Sbjct: 122 KEDNEDDLMAQLEKMEGRYESEKRLQKESDSKRNRSRSR 160
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 595 (214.5 bits), Expect = 1.1e-94, Sum P(2) = 1.1e-94
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 688 FGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYL 747
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 748 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 807
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 808 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 867
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 868 PISQAQAKQR 877
Score = 387 (141.3 bits), Expect = 1.1e-94, Sum P(2) = 1.1e-94
Identities = 73/132 (55%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ L +L E+R++LPIY +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 543 KTQLSIL-EQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRG 601
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 602 KIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 661
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 662 IDPDLGQYAIIM 673
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 596 (214.9 bits), Expect = 1.4e-94, Sum P(2) = 1.4e-94
Identities = 112/190 (58%), Positives = 145/190 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 694 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 753
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
+A+++T +QIH+ EP GDILVFLTGQ++ +TA EIL +R + LG + ELII P+Y LP
Sbjct: 754 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 813
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IF+P P G+RKVV+ATNIAETSLTIDGI YV+DPGF K K YN KTG++ L+V
Sbjct: 814 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 873
Query: 623 PISKASANQR 632
PIS+A A QR
Sbjct: 874 PISQAQAKQR 883
Score = 385 (140.6 bits), Expect = 1.4e-94, Sum P(2) = 1.4e-94
Identities = 71/132 (53%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ + ++ E+R++LPIY +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 549 KTQMSII-EQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 607
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 608 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 667
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 668 IDPDLTQYAIIM 679
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 553 (199.7 bits), Expect = 1.5e-92, Sum P(3) = 1.5e-92
Identities = 109/191 (57%), Positives = 144/191 (75%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L D++ R D KL+++SATLDAE FS YF ++PIF IP + + VE+ ++K PE+DY+
Sbjct: 764 FCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYV 823
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAE-LIICPIYGNL 561
EA+++T L IH+NE GDILVFLTGQD+ TA EIL +R + L + LII PIY +L
Sbjct: 824 EASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSL 883
Query: 562 PTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLV 621
P+E+Q+ IFEP P G RK +LATNIAE SLTIDGI +VIDPGF K+K Y+ K M+SL+V
Sbjct: 884 PSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIV 943
Query: 622 NPISKASANQR 632
PISKA+A QR
Sbjct: 944 APISKANAKQR 954
Score = 359 (131.4 bits), Expect = 1.5e-92, Sum P(3) = 1.5e-92
Identities = 68/133 (51%), Positives = 93/133 (69%)
Query: 315 VKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQ 374
VK+ L + E+R LPIY + +L++A+ + VL+++GETGSGKTTQIPQYL+EA YT++
Sbjct: 618 VKNTLP-INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEK 676
Query: 375 GKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREI 434
G +GCTQ +E G LG EVGYSIRF+DCTS+ T++KY+TDGMLLRE
Sbjct: 677 GIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRET 736
Query: 435 VLEPSLESYSVLI 447
+ + L YS +I
Sbjct: 737 LSDTLLTKYSFII 749
Score = 77 (32.2 bits), Expect = 1.5e-92, Sum P(3) = 1.5e-92
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 192 KDDGIENL---REVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKK 248
K++ I NL E +++ K ++K E I+ +K K+N +T +L + Y+KK
Sbjct: 123 KNEDITNLVDSDENDKKEKSIKGTKEKKESIEITSKQKKN--SDINVTTRDLSDSSYQKK 180
Query: 249 ILDLVGQEGLQRCSHESDKQQRK-KADLKYGSKNKKQQYDDYQY 291
G + ES + + K D KY S KK++YD+ Y
Sbjct: 181 RRKKKNSSGGSSKNTESSFETKDIKKDNKYES-GKKRKYDERYY 223
Score = 61 (26.5 bits), Expect = 7.3e-91, Sum P(3) = 7.3e-91
Identities = 27/120 (22%), Positives = 49/120 (40%)
Query: 181 KEEYDAIQRSRKDDGIE-NLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAE 239
KE + + +K+ I R++S Y KR +KK +K+ E+ FE + +
Sbjct: 150 KESIEITSKQKKNSDINVTTRDLSDSSYQKKRRKKK-NSSGGSSKNTESSFETKDIKKDN 208
Query: 240 LCELD----YEKKILDLVGQEGLQRCSHESDKQQR-KKADL---KYGSKNKKQQYDDYQY 291
E Y+++ D +E H K+ R K L ++ NK +D+ +
Sbjct: 209 KYESGKKRKYDERYYDRHSKEHHHSNKHRHSKEHRHSKEHLHSKEHHHSNKHHHSNDHHH 268
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 553 (199.7 bits), Expect = 1.5e-92, Sum P(3) = 1.5e-92
Identities = 109/191 (57%), Positives = 144/191 (75%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L D++ R D KL+++SATLDAE FS YF ++PIF IP + + VE+ ++K PE+DY+
Sbjct: 764 FCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYV 823
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAE-LIICPIYGNL 561
EA+++T L IH+NE GDILVFLTGQD+ TA EIL +R + L + LII PIY +L
Sbjct: 824 EASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSL 883
Query: 562 PTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLV 621
P+E+Q+ IFEP P G RK +LATNIAE SLTIDGI +VIDPGF K+K Y+ K M+SL+V
Sbjct: 884 PSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIV 943
Query: 622 NPISKASANQR 632
PISKA+A QR
Sbjct: 944 APISKANAKQR 954
Score = 359 (131.4 bits), Expect = 1.5e-92, Sum P(3) = 1.5e-92
Identities = 68/133 (51%), Positives = 93/133 (69%)
Query: 315 VKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQ 374
VK+ L + E+R LPIY + +L++A+ + VL+++GETGSGKTTQIPQYL+EA YT++
Sbjct: 618 VKNTLP-INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEK 676
Query: 375 GKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREI 434
G +GCTQ +E G LG EVGYSIRF+DCTS+ T++KY+TDGMLLRE
Sbjct: 677 GIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRET 736
Query: 435 VLEPSLESYSVLI 447
+ + L YS +I
Sbjct: 737 LSDTLLTKYSFII 749
Score = 77 (32.2 bits), Expect = 1.5e-92, Sum P(3) = 1.5e-92
Identities = 30/104 (28%), Positives = 50/104 (48%)
Query: 192 KDDGIENL---REVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKK 248
K++ I NL E +++ K ++K E I+ +K K+N +T +L + Y+KK
Sbjct: 123 KNEDITNLVDSDENDKKEKSIKGTKEKKESIEITSKQKKN--SDINVTTRDLSDSSYQKK 180
Query: 249 ILDLVGQEGLQRCSHESDKQQRK-KADLKYGSKNKKQQYDDYQY 291
G + ES + + K D KY S KK++YD+ Y
Sbjct: 181 RRKKKNSSGGSSKNTESSFETKDIKKDNKYES-GKKRKYDERYY 223
Score = 61 (26.5 bits), Expect = 7.3e-91, Sum P(3) = 7.3e-91
Identities = 27/120 (22%), Positives = 49/120 (40%)
Query: 181 KEEYDAIQRSRKDDGIE-NLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAE 239
KE + + +K+ I R++S Y KR +KK +K+ E+ FE + +
Sbjct: 150 KESIEITSKQKKNSDINVTTRDLSDSSYQKKRRKKK-NSSGGSSKNTESSFETKDIKKDN 208
Query: 240 LCELD----YEKKILDLVGQEGLQRCSHESDKQQR-KKADL---KYGSKNKKQQYDDYQY 291
E Y+++ D +E H K+ R K L ++ NK +D+ +
Sbjct: 209 KYESGKKRKYDERYYDRHSKEHHHSNKHRHSKEHRHSKEHLHSKEHHHSNKHHHSNDHHH 268
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 603 (217.3 bits), Expect = 5.2e-91, Sum P(2) = 5.2e-91
Identities = 121/223 (54%), Positives = 163/223 (73%)
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATLDAENF 470
+C D + KY ++L E E ++ + + +L + RPDLKL+++SATLDAE F
Sbjct: 615 ECLVDPLLSKYSV--IILDE-AHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERF 671
Query: 471 SDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQ 530
S YF PIF IP R Y VE+ YTK PEADY++AA++T +QIH++E GDILVFLTGQ++
Sbjct: 672 SSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEE 731
Query: 531 FETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETS 590
+T+ EIL +R++ LG I EL+I P+Y LP+E+Q++IFEP P G RKVV+ATNIAETS
Sbjct: 732 IDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETS 791
Query: 591 LTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
LTIDGI YV+DPGF K ++PK GM+SL+V PIS+A A QR+
Sbjct: 792 LTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRS 834
Score = 343 (125.8 bits), Expect = 5.2e-91, Sum P(2) = 5.2e-91
Identities = 75/189 (39%), Positives = 111/189 (58%)
Query: 267 KQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIV-------DFFRESVELPDKSAVKSAL 319
+Q+ +K DL ++ D ++ ++ D +R++ + S K
Sbjct: 441 EQEMEKQDLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWRQATRNANISYGKRTT 500
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IG 378
++E+R+ LP++ R++ L+AVS+ +LV++GETGSGKTTQI QYL E GYT K IG
Sbjct: 501 LSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIG 560
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEP 438
CTQ +E+G ++G EVGY+IRFED TS T +KYMTDGML RE +++P
Sbjct: 561 CTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDP 620
Query: 439 SLESYSVLI 447
L YSV+I
Sbjct: 621 LLSKYSVII 629
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 479 (173.7 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 124/308 (40%), Positives = 175/308 (56%)
Query: 149 LRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIEN-LREVSRQKY 207
LR + +E L +R RE+ +L + + + + + R++ + +R+++R+ Y
Sbjct: 226 LRKKSRREYLAKREREKLEDLEAELADEEFLFGD-VELSRHERQELKYKRRVRDLARE-Y 283
Query: 208 LPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDK 267
Q+KLE KE GQ +L E E+ G+E QR E+
Sbjct: 284 RAAGEQEKLEATNRYHMPKET--RGQPARAVDLVE---EES--GAPGEE--QRRWEEA-- 332
Query: 268 QQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFR-------ESVELPDKSAVKSALE 320
+ A LK+G+++ Q YQ V E E++ ++F R E P S E
Sbjct: 333 -RLGAASLKFGARDAASQEPKYQLVLE-EEETIEFVRATQLQGDEEPSAPPTSTQAQQKE 390
Query: 321 MLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG-KIGC 379
+Q R++LP++PFREELL A++ + VL+I GETGSGKTTQIPQYL+E GYT +G KI C
Sbjct: 391 SIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIAC 450
Query: 380 TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPS 439
TQ +EMGVKLG+EVGYSIRFEDCTS++TVL+YMTDGMLLRE + EP
Sbjct: 451 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 510
Query: 440 LESYSVLI 447
L SYSV++
Sbjct: 511 LASYSVVM 518
Score = 447 (162.4 bits), Expect = 6.2e-91, Sum P(2) = 6.2e-91
Identities = 79/137 (57%), Positives = 111/137 (81%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SAT+D FS +F AP+F+IP RR+ V++FYTKAPEADY+
Sbjct: 533 FGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYL 592
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 593 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 652
Query: 563 TELQAKIFEPTPEGARK 579
+++QA+IF+PTP GARK
Sbjct: 653 SDMQARIFQPTPPGARK 669
Score = 151 (58.2 bits), Expect = 8.2e-56, Sum P(2) = 8.2e-56
Identities = 54/223 (24%), Positives = 101/223 (45%)
Query: 54 STTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRITASTNKKR-----FRKR 108
+ E A A E AR +++ S +L+ + +++ V R +S KKR RK+
Sbjct: 74 AVVEKPARAAEREARALLEKNRSYR--LLEDSEESSEETVSRAGSSLQKKRKKRKHLRKK 131
Query: 109 IGSEDDDDEGIASXXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQRGKEELERRIRERDVA 168
E++++ RL+D ++ R+R+RD
Sbjct: 132 REEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLEERDAFAERVRQRDKD 191
Query: 169 ATRKLT--GPKLTWKEEYDAIQRSRKDDG--IENLREVSRQKYLPKRAQKKLEEIKDRTK 224
TR + K ++E ++ + +D + LR+ SR++YL KR ++KLE+++
Sbjct: 192 RTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKREREKLEDLEAELA 251
Query: 225 DKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDK 267
D+E LF +L+ E EL Y++++ DL + R + E +K
Sbjct: 252 DEEFLFGDVELSRHERQELKYKRRVRDLARE---YRAAGEQEK 291
Score = 68 (29.0 bits), Expect = 4.4e-47, Sum P(2) = 4.4e-47
Identities = 34/157 (21%), Positives = 70/157 (44%)
Query: 186 AIQRSRKD-DGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELD 244
++Q+ RK + RE ++ ++ +KK K +T+ E+ E ++ L +L+
Sbjct: 117 SLQKKRKKRKHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLE 176
Query: 245 YEKKILDLVGQEGLQRCSH---ESDKQQRKKAD--LKYGSKNKKQQYDDY------QYVF 293
+ V Q R + SDK+ ++A LK +++K + +Y+
Sbjct: 177 ERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLA 236
Query: 294 EIE-DKIVDFFRESVELPDKSAVKSALEMLQEERKTL 329
+ E +K+ D EL D+ + +E+ + ER+ L
Sbjct: 237 KREREKLEDL---EAELADEEFLFGDVELSRHERQEL 270
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 587 (211.7 bits), Expect = 2.2e-89, Sum P(2) = 2.2e-89
Identities = 111/191 (58%), Positives = 146/191 (76%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+++L + P+LK++++SATLD+ FS YF + PI IP R + VE+ YTKAPE DY+
Sbjct: 473 FALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCPIITIPGRTFPVEVLYTKAPEMDYL 532
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
AA+ + +QIHV+EP GDILVFLTGQ++ ET+ E L +R + LG I ELII P+Y LP
Sbjct: 533 AAALESVIQIHVSEPAGDILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALP 592
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+E+Q +IFEPTP G+RKV+LATNIAETS+TIDGI YV+DPGF K+ Y+ K GM+SL V
Sbjct: 593 SEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVT 652
Query: 623 PISKASANQRT 633
PISKA ANQR+
Sbjct: 653 PISKAQANQRS 663
Score = 339 (124.4 bits), Expect = 2.2e-89, Sum P(2) = 2.2e-89
Identities = 101/302 (33%), Positives = 153/302 (50%)
Query: 161 RIRERDVAATRKLTGPKLTWK-EEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEI 219
R +ER RKLT P+ W+ + + DD E +E Q K +E +
Sbjct: 162 RYQERQPRPKRKLTSPE-RWEIRQLISSGAVSADDYPELDQEEDTQTESEKTDNLHIE-L 219
Query: 220 KDRTKDKENLFEGQKLTG--AELCELDYEKK-ILDLVGQEGLQRCSHESDKQQRKKADLK 276
D+ K + +G K+T E + + L Q G + +++ ++K +
Sbjct: 220 NDK---KPDFLKGVKVTKDFPETTPIPVNQSGPLTKSAQRGSKFARDFKEEKFKQKKQRE 276
Query: 277 YGSKNKKQQYDD-YQYVFEIEDKIVDFFRESV----ELPDKSAV--KSALEMLQEERKTL 329
K + + D +Q +++ +D ES + +K+ K +QE+R+ L
Sbjct: 277 KEEKMQSELSDPLFQTSEPVKNSDLDPDTESFISKWKKSNKTETFGKRTSLPIQEQRRML 336
Query: 330 PIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK----IGCTQLXXX 385
P+Y R +LL+A+ + +VIVGETGSGKTTQI QY+YE G K G IGCTQ
Sbjct: 337 PVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIGCTQPRRV 396
Query: 386 XXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSV 445
+E+G KLG VGY+IRFED TS+ TV+KYMTDGML RE + +P++ YSV
Sbjct: 397 AAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALNDPNMNRYSV 456
Query: 446 LI 447
++
Sbjct: 457 IM 458
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 559 (201.8 bits), Expect = 6.5e-89, Sum P(2) = 6.5e-89
Identities = 103/180 (57%), Positives = 141/180 (78%)
Query: 453 RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQI 512
RP+LK++++SATL++ FS+YF + PI IP + + VE+ Y++ P+ DYIEAA+ + I
Sbjct: 626 RPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDI 685
Query: 513 HVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEP 572
H+NE GDILVFLTGQ++ ++ EIL R + LG I EL+I P+Y LP+E+Q+KIFEP
Sbjct: 686 HINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEP 745
Query: 573 TPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
TP+G+RKVV ATNIAETS+TIDGI YV+DPGFAK+ YN + G+E L+V+PIS+A ANQR
Sbjct: 746 TPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQR 805
Score = 368 (134.6 bits), Expect = 6.5e-89, Sum P(2) = 6.5e-89
Identities = 79/193 (40%), Positives = 118/193 (61%)
Query: 255 QEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSA 314
+E L++ E ++Q RK+ +KNKK ++ Q + + + + ++ + +
Sbjct: 412 EEKLRK-KREIEQQIRKQQSFDDPTKNKKDSRNEIQ-MLKNQLIVTEWEKNRMNESISYG 469
Query: 315 VKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQ 374
+++L + +R+TLP+Y R EL+QAV + LVIVGETGSGKTTQI QYL E G++
Sbjct: 470 KRTSLP-ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNY 528
Query: 375 GKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREI 434
G IGCTQ +E+G K+GH+VGY+IRFED T T +KYMTDGML RE
Sbjct: 529 GMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREA 588
Query: 435 VLEPSLESYSVLI 447
+L+P + YSV++
Sbjct: 589 LLDPEMSKYSVIM 601
Score = 51 (23.0 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 162 IRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRA--Q--KKLE 217
++++ V +K PK+T K + RS + G +R+ +K KR Q +K +
Sbjct: 372 LKDQQVKGAKKYEMPKIT-KVPRGFMNRSAIN-GSNAIRDHREEKLRKKREIEQQIRKQQ 429
Query: 218 EIKDRTKDKENLFEGQKLTGAELCELDYEK 247
D TK+K++ ++ +L ++EK
Sbjct: 430 SFDDPTKNKKDSRNEIQMLKNQLIVTEWEK 459
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 507 (183.5 bits), Expect = 2.7e-88, Sum P(4) = 2.7e-88
Identities = 103/228 (45%), Positives = 154/228 (67%)
Query: 410 IRFEDCTSDKTVLKYMTDGMLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATLD 466
I +C D ++ +Y ++ + E SL + + +L ++I R DLKL+++SAT+D
Sbjct: 541 ILLRECLGDGSLDQYSA---IIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMD 597
Query: 467 AENFSDYFG-SAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFL 525
A+ F+D+FG + P F IP R + VELF+ + P DY++AA+ A+ IH+ GDIL+F+
Sbjct: 598 ADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFM 657
Query: 526 TGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATN 585
GQ+ E E++K++ L + L + PIY LP++LQAKIF+ P G RK ++ATN
Sbjct: 658 PGQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATN 716
Query: 586 IAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
IAETSLT+DGI +VIDPGF K+K YNP+ GM++L + P+S+ASANQRT
Sbjct: 717 IAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRT 764
Score = 351 (128.6 bits), Expect = 2.7e-88, Sum P(4) = 2.7e-88
Identities = 81/192 (42%), Positives = 116/192 (60%)
Query: 268 QQRKKADLKY----GSK--NKKQQYDDYQYVFEIEDKIVDFFRESVE----LPDKSAVKS 317
+ RKKA K+ GSK N + + ED ++ES + + D AV
Sbjct: 368 EDRKKAQDKHWELAGSKLGNLMGVKEKKDETADPEDDDSGNYKESHQFASHMKDNEAVSD 427
Query: 318 -ALEM-LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
A+E ++++R+ LP++ R++++ + E V++IVGETGSGKTTQ+ QYL E G+ G
Sbjct: 428 FAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG 487
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
IGCTQ EMGV LG +VGY+IRFEDCTS+KT++KYMTDG+LLRE +
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 436 LEPSLESYSVLI 447
+ SL+ YS +I
Sbjct: 548 GDGSLDQYSAII 559
Score = 58 (25.5 bits), Expect = 2.7e-88, Sum P(4) = 2.7e-88
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 98 ASTNKKRFRKRIGSEDDDDEGI 119
AST ++ RKR+ EDDDD G+
Sbjct: 48 ASTKREHARKRL--EDDDDRGV 67
Score = 54 (24.1 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 24/101 (23%), Positives = 46/101 (45%)
Query: 212 AQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQ-----EGLQRCSHE-S 265
A +K E++DR K ++ +E L G++L L K+ D G + SH+ +
Sbjct: 360 AVRKRREVEDRKKAQDKHWE---LAGSKLGNLMGVKEKKDETADPEDDDSGNYKESHQFA 416
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRES 306
+ +A + + +Q +Y VF K+++ RE+
Sbjct: 417 SHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIREN 457
Score = 50 (22.7 bits), Expect = 2.7e-88, Sum P(4) = 2.7e-88
Identities = 24/99 (24%), Positives = 39/99 (39%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRS------RKDDGIENLREVS 203
R R E+ R ++E T + W+EE + R DD +VS
Sbjct: 192 RRHRKPEDSVRSVKEEKAEPTFHDDEERAQWEEEQKNLDREWYDNEGAFDDEYNPFNKVS 251
Query: 204 ------RQKYLPKRAQKKLEEIKDRTKDKEN-LFEGQKL 235
R+K ++ QK +K + +EN L+E +L
Sbjct: 252 DEFVEKREKQWQEKTQKPRLTVKQQAIKRENELWENNRL 290
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 507 (183.5 bits), Expect = 2.7e-88, Sum P(4) = 2.7e-88
Identities = 103/228 (45%), Positives = 154/228 (67%)
Query: 410 IRFEDCTSDKTVLKYMTDGMLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATLD 466
I +C D ++ +Y ++ + E SL + + +L ++I R DLKL+++SAT+D
Sbjct: 541 ILLRECLGDGSLDQYSA---IIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMD 597
Query: 467 AENFSDYFG-SAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFL 525
A+ F+D+FG + P F IP R + VELF+ + P DY++AA+ A+ IH+ GDIL+F+
Sbjct: 598 ADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFM 657
Query: 526 TGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATN 585
GQ+ E E++K++ L + L + PIY LP++LQAKIF+ P G RK ++ATN
Sbjct: 658 PGQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATN 716
Query: 586 IAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
IAETSLT+DGI +VIDPGF K+K YNP+ GM++L + P+S+ASANQRT
Sbjct: 717 IAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRT 764
Score = 351 (128.6 bits), Expect = 2.7e-88, Sum P(4) = 2.7e-88
Identities = 81/192 (42%), Positives = 116/192 (60%)
Query: 268 QQRKKADLKY----GSK--NKKQQYDDYQYVFEIEDKIVDFFRESVE----LPDKSAVKS 317
+ RKKA K+ GSK N + + ED ++ES + + D AV
Sbjct: 368 EDRKKAQDKHWELAGSKLGNLMGVKEKKDETADPEDDDSGNYKESHQFASHMKDNEAVSD 427
Query: 318 -ALEM-LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
A+E ++++R+ LP++ R++++ + E V++IVGETGSGKTTQ+ QYL E G+ G
Sbjct: 428 FAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG 487
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
IGCTQ EMGV LG +VGY+IRFEDCTS+KT++KYMTDG+LLRE +
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 436 LEPSLESYSVLI 447
+ SL+ YS +I
Sbjct: 548 GDGSLDQYSAII 559
Score = 58 (25.5 bits), Expect = 2.7e-88, Sum P(4) = 2.7e-88
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 98 ASTNKKRFRKRIGSEDDDDEGI 119
AST ++ RKR+ EDDDD G+
Sbjct: 48 ASTKREHARKRL--EDDDDRGV 67
Score = 54 (24.1 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 24/101 (23%), Positives = 46/101 (45%)
Query: 212 AQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQ-----EGLQRCSHE-S 265
A +K E++DR K ++ +E L G++L L K+ D G + SH+ +
Sbjct: 360 AVRKRREVEDRKKAQDKHWE---LAGSKLGNLMGVKEKKDETADPEDDDSGNYKESHQFA 416
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRES 306
+ +A + + +Q +Y VF K+++ RE+
Sbjct: 417 SHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIREN 457
Score = 50 (22.7 bits), Expect = 2.7e-88, Sum P(4) = 2.7e-88
Identities = 24/99 (24%), Positives = 39/99 (39%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRS------RKDDGIENLREVS 203
R R E+ R ++E T + W+EE + R DD +VS
Sbjct: 192 RRHRKPEDSVRSVKEEKAEPTFHDDEERAQWEEEQKNLDREWYDNEGAFDDEYNPFNKVS 251
Query: 204 ------RQKYLPKRAQKKLEEIKDRTKDKEN-LFEGQKL 235
R+K ++ QK +K + +EN L+E +L
Sbjct: 252 DEFVEKREKQWQEKTQKPRLTVKQQAIKRENELWENNRL 290
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 515 (186.3 bits), Expect = 1.9e-86, Sum P(3) = 1.9e-86
Identities = 94/191 (49%), Positives = 140/191 (73%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R D+KL+++SAT+D++ FS +FG P+F IP R + V++ ++K P DY+
Sbjct: 792 FGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDVPVFTIPGRTFPVDVLWSKTPCEDYV 851
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
++A+ L IHV + +GDILVF+TGQ+ ET +++R + LG + L + PIY LP
Sbjct: 852 DSAVKQILSIHVTQGVGDILVFMTGQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLP 911
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QAKIFE G+RK ++ATNIAETSLT+DGI YVID G+ K+K YNP+ GM+SL V
Sbjct: 912 SDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVT 971
Query: 623 PISKASANQRT 633
PISKA+ANQR+
Sbjct: 972 PISKANANQRS 982
Score = 382 (139.5 bits), Expect = 1.9e-86, Sum P(3) = 1.9e-86
Identities = 89/243 (36%), Positives = 139/243 (57%)
Query: 211 RAQKKLEEIKDRTKDKENLFEGQKLTGAELCE----LDYEKKILDLVGQEGLQRCSHESD 266
+ Q+ ++ +KD T D + E E + +KK+ +L G + +S+
Sbjct: 536 KQQRAVQTVKDPTSDMAVISRKGSALMKEFREKRDRIKSQKKVWELGGTAIGKIMGIKSE 595
Query: 267 KQQRKKADLKYGSKNKKQQYDDYQYV--FEIEDKIVDFFRESVELPDKSAVKSALEMLQE 324
++ K+ L G +Q + V ++ + + + + + S+ S + ++E
Sbjct: 596 DEKEKEQQLANGGGGGEQIDKETGEVLNYKAQSQFASHLTPN-KPTEGSSEFSKTKTIKE 654
Query: 325 ERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXX 384
+R+ LPI+ R +L++ + E V++IVGETGSGKTTQ+ QYLYE GY+K GKIGCTQ
Sbjct: 655 QREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFGKIGCTQPRR 714
Query: 385 XXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS 444
+EM V LG+EVGYSIRFEDCTS++T +KYMTDG+LLRE +P+L+ YS
Sbjct: 715 VAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESFNDPNLDKYS 774
Query: 445 VLI 447
+I
Sbjct: 775 AII 777
Score = 37 (18.1 bits), Expect = 1.9e-86, Sum P(3) = 1.9e-86
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 70 PRKESESKTNTILDAAHYDADDDVIRITASTN 101
P + E D +YDAD+ + S+N
Sbjct: 415 PHLKEEEYEEEEFDRGYYDADEGEGGVFDSSN 446
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 495 (179.3 bits), Expect = 5.1e-86, Sum P(4) = 5.1e-86
Identities = 90/191 (47%), Positives = 139/191 (72%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+DAE F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 664 FGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 723
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ +LQ+H++ GDIL+F+ GQ+ E + + + L A L + PIY LP
Sbjct: 724 EAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAVLPIYSQLP 782
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +NP+ GM++L +
Sbjct: 783 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIY 842
Query: 623 PISKASANQRT 633
PIS+A+ANQR+
Sbjct: 843 PISQANANQRS 853
Score = 375 (137.1 bits), Expect = 5.1e-86, Sum P(4) = 5.1e-86
Identities = 84/214 (39%), Positives = 126/214 (58%)
Query: 250 LDLVGQEGLQRCSHESDKQQRKKADLKY----GSK-------NKKQQYD-----DYQYVF 293
L ++ ++G Q ++++RKKA K+ G+K K+++ D D + +
Sbjct: 439 LAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEPDKALTEDGKVDY 498
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
E K D ++ E + A K ++ E+R+ LPI+ ++ELL + + ++++VGE
Sbjct: 499 RTEQKFADHMKKKSEASSEFAKKKSI---LEQRQYLPIFAVQQELLTIIRDNSIVIVVGE 555
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TGSGKTTQ+ QYL+E GYT G IGCTQ +EMG LG EVGY+IRFE
Sbjct: 556 TGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFE 615
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
DCTS+ T++KYMTDG+LLRE + E L+ YS +I
Sbjct: 616 DCTSENTLIKYMTDGILLRESLREADLDHYSAVI 649
Score = 39 (18.8 bits), Expect = 5.1e-86, Sum P(4) = 5.1e-86
Identities = 10/45 (22%), Positives = 24/45 (53%)
Query: 204 RQKYLPKRAQKKLE-EIKDRTKDKENLFEGQKLTGAELCELDYEK 247
R+++L K+ QK++ + + +D E + LT + L+ ++
Sbjct: 350 REQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDE 394
Score = 39 (18.8 bits), Expect = 5.1e-86, Sum P(4) = 5.1e-86
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKD 193
R RD K E + R R R + + + G + + + E ++ + KD
Sbjct: 160 RDRDSDRKRERDERDRSRHSSRSERDGGSERSRRNEPESPRHRPKD 205
Score = 37 (18.1 bits), Expect = 5.4e-47, Sum P(2) = 5.4e-47
Identities = 27/141 (19%), Positives = 54/141 (38%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R +R + E R R +D A T + TW+EE SR+ S +
Sbjct: 190 RSRRNEPESPRH-RPKDAA-----TPSRSTWEEEDSGYGFSRRSQWESPSPTPSYRD--S 241
Query: 210 KRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQ 269
R+ + + +DR + + + T Y + D R S +++
Sbjct: 242 DRSHR--QSSRDRDRSVRSRYSDD--TPLPTPSYKYNEWADDRKHLGSTPRLSRGRGRRE 297
Query: 270 RKKADLKYGSKNKKQQYDDYQ 290
+ + + ++ ++QQ++D Q
Sbjct: 298 DGEEGISFDTEEERQQWEDDQ 318
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 507 (183.5 bits), Expect = 7.4e-86, Sum P(3) = 7.4e-86
Identities = 91/190 (47%), Positives = 141/190 (74%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L ++++ R DLKL+++SAT+D++ F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 696 FGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 755
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ ALQIH++ +GDIL+F+ GQ+ E + + +R L A L + PIY LP
Sbjct: 756 EAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPA-LAVLPIYSQLP 814
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +V+D G+ K+K +NP+ GM++L V
Sbjct: 815 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVY 874
Query: 623 PISKASANQR 632
PIS+A+ANQR
Sbjct: 875 PISQANANQR 884
Score = 375 (137.1 bits), Expect = 7.4e-86, Sum P(3) = 7.4e-86
Identities = 85/214 (39%), Positives = 122/214 (57%)
Query: 252 LVGQEGLQRCSHESDKQQRKKADLKY----GSK-------NKKQQYDDYQYV-------F 293
++ ++G Q ++++RKKA K+ G+K KK+ D + V +
Sbjct: 471 IISRKGSQLVRRHREQKERKKAQHKHWELAGTKLGDIMGIQKKEDGGDSKAVGEDGKVDY 530
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
E K D +E E A K L E+R+ LPI+ R++LL + + ++++VGE
Sbjct: 531 RAEQKFADHMKEKSEASSDFAKKKTL---LEQRQYLPIFAVRQQLLNIIRDNNIVIVVGE 587
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TGSGKTTQ+ QYL+E GYT G +GCTQ +EM LG EVGY+IRFE
Sbjct: 588 TGSGKTTQLTQYLHEDGYTSYGMVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFE 647
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
DCTS+KT++KYMTDG+LLRE + E L+ YS +I
Sbjct: 648 DCTSEKTMIKYMTDGILLRESLRESDLDHYSAVI 681
Score = 48 (22.0 bits), Expect = 2.2e-49, Sum P(2) = 2.2e-49
Identities = 49/283 (17%), Positives = 102/283 (36%)
Query: 53 SSTTETRAFAQEIFARV-PRKESESKTNTILDAAHYDADDDVIRITASTNKKRFRKRIGS 111
S T E F R ++E + + + + ++ D D R + R R R
Sbjct: 113 SETPSNPGGVSEEFKRKHQQREKDRREHGVYASSKEDKSKDKNR-SRDREHDRHRDRERR 171
Query: 112 EDDDDEGIASXXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQRG--KEELER-RIRERDVA 168
+D D+ + R RG +EE E R + +D+A
Sbjct: 172 KDRDERESSRSRGSSSSRSERSEGSVRSERSQREGCSERMSRGTRREEPESPRNKPKDLA 231
Query: 169 ATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVS-RQKYLPKRAQKKLEEIKDRTKDKE 227
T + +W E+ SR S R+ +R+Q+ + + + R + +
Sbjct: 232 -----TPSRCSWDEDDSGYASSRHSHWESPSPAPSHRENDRSERSQRSVRDSERRDRSSK 286
Query: 228 NLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSH-ESDKQQRKKADLKYGSKNKKQQY 286
+ T Y + D R S + +K++ + +++ +++K+Q+
Sbjct: 287 PQYPTD--TPLPTPSYKYNEWANDRKHFGSTPRLSRGKGEKREEGEGGIQFDDEDEKEQW 344
Query: 287 DDYQYVFEIE----DKIVDFFRESVELPDKSAVKSALEMLQEE 325
++ Q + + D+ D F + VK ++LQ++
Sbjct: 345 EEDQRQADRDWYMMDEGYDEFHNPLTSSSDEYVKKREQILQKQ 387
Score = 44 (20.5 bits), Expect = 7.4e-86, Sum P(3) = 7.4e-86
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 182 EEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDR-TKDKENLFEGQKLTGAEL 240
E YD E +++ R++ L K+ QK++ K + +D E + LT +
Sbjct: 360 EGYDEFHNPLTSSSDEYVKK--REQILQKQTQKRISAQKRQINEDNERWETNRMLTSGVV 417
Query: 241 CELDYEK 247
L+ ++
Sbjct: 418 QRLEVDE 424
Score = 44 (20.5 bits), Expect = 7.4e-86, Sum P(3) = 7.4e-86
Identities = 22/125 (17%), Positives = 52/125 (41%)
Query: 152 QRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGI--ENLREVSRQKYLP 209
+ GK+E + R+ + + G +K ++ ++ R++ G+ + + S+ K
Sbjct: 100 RNGKKERKYRVTGSETPSNPG--GVSEEFKRKHQQREKDRREHGVYASSKEDKSKDKNRS 157
Query: 210 KRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQR--CSHESDK 267
+ + ++R KD++ E + G+ + + V E QR CS +
Sbjct: 158 RDREHDRHRDRERRKDRDER-ESSRSRGSSSSRSERSE---GSVRSERSQREGCSERMSR 213
Query: 268 QQRKK 272
R++
Sbjct: 214 GTRRE 218
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 492 (178.3 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 89/191 (46%), Positives = 139/191 (72%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+DA+ F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 666 FGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 725
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ +LQ+H++ GDIL+F+ GQ+ E + + + L A L + PIY LP
Sbjct: 726 EAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAVLPIYSQLP 784
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +NP+ GM++L +
Sbjct: 785 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIY 844
Query: 623 PISKASANQRT 633
PIS+A+ANQR+
Sbjct: 845 PISQANANQRS 855
Score = 374 (136.7 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 83/214 (38%), Positives = 126/214 (58%)
Query: 250 LDLVGQEGLQRCSHESDKQQRKKADLKY----GSK-------NKKQQYD-----DYQYVF 293
L ++ ++G Q ++++R+KA K+ G+K K+++ D D + +
Sbjct: 441 LAIIARKGSQTVRKHREQKERRKAQHKHWELAGTKLGDIMGVKKEEEPDKAMTEDGKVDY 500
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
E K D +E E + A K ++ E+R+ LPI+ ++ELL + + ++++VGE
Sbjct: 501 RTEQKFADHMKEKSEASSEFAKKKSI---LEQRQYLPIFAVQQELLTIIRDNSIVIVVGE 557
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TGSGKTTQ+ QYL++ GYT G IGCTQ +EMG LG EVGY+IRFE
Sbjct: 558 TGSGKTTQLTQYLHQDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFE 617
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
DCTS+ T++KYMTDG+LLRE + E L+ YS +I
Sbjct: 618 DCTSENTLIKYMTDGILLRESLREADLDHYSAII 651
Score = 40 (19.1 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 74 SESKTNTILDAAHYDADD--DVIRITASTNKKRFRKRIGSEDDDDEGIA 120
S+S +T L Y ++ D R ST R + G +D +EGIA
Sbjct: 260 SKSSDDTPLPTPSYKYNEWADDRRHLGST--PRLSRGRGRREDGEEGIA 306
Score = 39 (18.8 bits), Expect = 1.1e-85, Sum P(4) = 1.1e-85
Identities = 10/45 (22%), Positives = 24/45 (53%)
Query: 204 RQKYLPKRAQKKLE-EIKDRTKDKENLFEGQKLTGAELCELDYEK 247
R+++L K+ QK++ + + +D E + LT + L+ ++
Sbjct: 352 REQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDE 396
Score = 39 (18.8 bits), Expect = 7.0e-47, Sum P(2) = 7.0e-47
Identities = 29/144 (20%), Positives = 55/144 (38%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R R E R R +D A T + TW+EE D G + R + P
Sbjct: 191 RSSRRNEPESPRHRPKDAA-----TPSRSTWEEE---------DSGYGSSRRSQWETPSP 236
Query: 210 KRAQKKLEEI-KDRTKDKENLFEGQKLTGAELCELDYE-KKILDLVGQEG-LQRCSHESD 266
+ + E + T+D++ + L Y+ + D G R S
Sbjct: 237 TPSYRDSERSHRPSTRDRDRSVRSKSSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRG 296
Query: 267 KQQRKKADLKYGSKNKKQQYDDYQ 290
+++ + + + ++ ++QQ++D Q
Sbjct: 297 RREDGEEGIAFDTEEERQQWEDDQ 320
Score = 37 (18.1 bits), Expect = 1.8e-83, Sum P(3) = 1.8e-83
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 182 EEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDK 226
EE+ R R+ D E+ S ++ ++ +K + DR +D+
Sbjct: 126 EEFWERSRQRERDRREHGVYASSKEDKDRKKEKSRDRDHDRKRDR 170
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 549 (198.3 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 109/198 (55%), Positives = 145/198 (73%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ RPDLKL++ SATL+AE F DYF AP+ K+P R + VE+FYT+ PE DY+
Sbjct: 200 FGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYL 259
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAAI T +QIH+ EP GDILVFLTG+++ E A + + LG ++ + + P+Y LP
Sbjct: 260 EAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLP 319
Query: 563 TELQAKIFEPTPE-----G--ARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTG 615
+Q KIF+P PE G RK+V++TNIAETSLTIDGI YVIDPGFAK K YNP+
Sbjct: 320 PAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIR 379
Query: 616 MESLLVNPISKASANQRT 633
+ESLLV+PISKASA+QR+
Sbjct: 380 VESLLVSPISKASAHQRS 397
Score = 317 (116.6 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 66/130 (50%), Positives = 89/130 (68%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEA--GYT--KQGK--I 377
E+R+TLP++ +EE L+ ++ L++VGETGSGKTTQIPQ++ +A T K+ K +
Sbjct: 56 EKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLV 115
Query: 378 GCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLE 437
GCTQ +EM V +G EVGYSIRFEDC+S +TVLKY+TDGMLLRE + +
Sbjct: 116 GCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMAD 175
Query: 438 PSLESYSVLI 447
P LE Y V+I
Sbjct: 176 PLLERYKVII 185
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 497 (180.0 bits), Expect = 2.0e-84, Sum P(3) = 2.0e-84
Identities = 90/191 (47%), Positives = 139/191 (72%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+DAE F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 665 FGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 724
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ +LQ+H++ GDIL+F+ GQ+ E + + + L A L + PIY LP
Sbjct: 725 EAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAVLPIYSQLP 783
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +NP+ GM++L +
Sbjct: 784 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIY 843
Query: 623 PISKASANQRT 633
PIS+A+ANQR+
Sbjct: 844 PISQANANQRS 854
Score = 376 (137.4 bits), Expect = 2.0e-84, Sum P(3) = 2.0e-84
Identities = 84/214 (39%), Positives = 126/214 (58%)
Query: 250 LDLVGQEGLQRCSHESDKQQRKKADLKY----GSK-------NKKQQYD-----DYQYVF 293
L ++ ++G Q ++++RKKA K+ G+K K+++ D D + +
Sbjct: 440 LAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEPDKSLTEDGKVDY 499
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
E K D ++ E + A K ++ E+R+ LPI+ ++ELL + + ++++VGE
Sbjct: 500 RTEQKFADHMKKKSEASSEFAKKKSI---LEQRQYLPIFAVQQELLTIIRDNSIVIVVGE 556
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TGSGKTTQ+ QYL+E GYT G IGCTQ +EMG LG EVGY+IRFE
Sbjct: 557 TGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFE 616
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
DCTS+ T++KYMTDG+LLRE + E L+ YS +I
Sbjct: 617 DCTSESTLIKYMTDGILLRESLREADLDHYSAII 650
Score = 39 (18.8 bits), Expect = 2.0e-84, Sum P(3) = 2.0e-84
Identities = 10/45 (22%), Positives = 24/45 (53%)
Query: 204 RQKYLPKRAQKKLE-EIKDRTKDKENLFEGQKLTGAELCELDYEK 247
R+++L K+ QK++ + + +D E + LT + L+ ++
Sbjct: 351 REQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDE 395
Score = 37 (18.1 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 27/141 (19%), Positives = 52/141 (36%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R R E R R +D A T + TW+EE SR+ S +
Sbjct: 190 RSSRRNEPESPRHRPKDAA-----TPSRSTWEEEDSGYGSSRRSQWESPSPTPSYRD--S 242
Query: 210 KRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQ 269
+R+ + +DR + + + T Y + D R S +++
Sbjct: 243 ERSHRPSS--RDRDRSVRSRYSDD--TPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRRE 298
Query: 270 RKKADLKYGSKNKKQQYDDYQ 290
+ + + ++ ++QQ++D Q
Sbjct: 299 DGEEGISFDTEEERQQWEDDQ 319
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 495 (179.3 bits), Expect = 4.2e-84, Sum P(3) = 4.2e-84
Identities = 90/191 (47%), Positives = 139/191 (72%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+DAE F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 665 FGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 724
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ +LQ+H++ GDIL+F+ GQ+ E + + + L A L + PIY LP
Sbjct: 725 EAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAVLPIYSQLP 783
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +NP+ GM++L +
Sbjct: 784 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIY 843
Query: 623 PISKASANQRT 633
PIS+A+ANQR+
Sbjct: 844 PISQANANQRS 854
Score = 375 (137.1 bits), Expect = 4.2e-84, Sum P(3) = 4.2e-84
Identities = 84/214 (39%), Positives = 125/214 (58%)
Query: 250 LDLVGQEGLQRCSHESDKQQRKKADLKY----GSK-------NKKQQYD-----DYQYVF 293
L ++ ++G Q ++++RKKA K+ G+K K+++ D D + +
Sbjct: 440 LAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEPDKAVTEDGKVDY 499
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
E K D + E + A K ++ E+R+ LPI+ ++ELL + + ++++VGE
Sbjct: 500 RTEQKFADHMKRKSEASSEFAKKKSI---LEQRQYLPIFAVQQELLTIIRDNSIVIVVGE 556
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TGSGKTTQ+ QYL+E GYT G IGCTQ +EMG LG EVGY+IRFE
Sbjct: 557 TGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFE 616
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
DCTS+ T++KYMTDG+LLRE + E L+ YS +I
Sbjct: 617 DCTSENTLIKYMTDGILLRESLREADLDHYSAII 650
Score = 45 (20.9 bits), Expect = 7.8e-48, Sum P(2) = 7.8e-48
Identities = 32/153 (20%), Positives = 61/153 (39%)
Query: 148 RLRDQRGKEELERRIRERDVAATR--KLTGPKLTWKEEYDAIQRSR-----KDDGIENLR 200
R RD+R + R ERD + R + P+ DA SR +D G + R
Sbjct: 168 RDRDERDRSRHSSR-SERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSR 226
Query: 201 EVSRQKYLPKRAQKKLEEI-KDRTKDKENLFEGQKLTGAELCELDYE-KKILDLVGQEG- 257
+ P + + E + T+D++ G+ L Y+ + D G
Sbjct: 227 RSQWESPSPTPSYRDSERSHRLSTRDRDRSVRGKYSDDTPLPTPSYKYNEWADDRRHLGS 286
Query: 258 LQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQ 290
R S +++ + + + ++ ++QQ++D Q
Sbjct: 287 TPRLSRGRGRREEGEEGISFDTEEERQQWEDDQ 319
Score = 39 (18.8 bits), Expect = 4.2e-84, Sum P(3) = 4.2e-84
Identities = 10/45 (22%), Positives = 24/45 (53%)
Query: 204 RQKYLPKRAQKKLE-EIKDRTKDKENLFEGQKLTGAELCELDYEK 247
R+++L K+ QK++ + + +D E + LT + L+ ++
Sbjct: 351 REQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDE 395
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 503 (182.1 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 98/188 (52%), Positives = 135/188 (71%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
+L +++ R D+KLL++SAT++++ FSD+FG AP F IP R Y V++ + KAP +DY+EA
Sbjct: 627 LLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEA 686
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTE 564
A+ LQIH+++P GDILVF+TGQ+ E EI+ R L L I PIY +P +
Sbjct: 687 AVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDA-PRLSILPIYSQMPAD 745
Query: 565 LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPI 624
LQAKIF+ G RKVV+ATNIAETSLT+ GI YV+D G+ K+K YN K G+++L V PI
Sbjct: 746 LQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPI 805
Query: 625 SKASANQR 632
S+A+ANQR
Sbjct: 806 SQANANQR 813
Score = 350 (128.3 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 67/125 (53%), Positives = 88/125 (70%)
Query: 323 QEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQL 382
+E+R+ LP + RE+LL + + VL++VGETGSGKTTQ+ Q+LYE GY + G IGCTQ
Sbjct: 486 REQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQP 545
Query: 383 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLES 442
+EMGV+LG VGYSIRFED T TV+KYMTDG+LLRE +++ +LE
Sbjct: 546 RRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEK 605
Query: 443 YSVLI 447
YSV+I
Sbjct: 606 YSVII 610
Score = 49 (22.3 bits), Expect = 1.6e-83, Sum P(3) = 1.6e-83
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 209 PKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQ 268
PK++Q L+ + + K +++ EG+ +EL +++ + L+ +G R + K
Sbjct: 111 PKKSQLGLDVLAVQKKKEKSQVEGR----SELSQVENDS--LESIGN--YDRVEFKRPKN 162
Query: 269 QRKKADLKYGSKNKKQQYDDYQYVFEIED 297
+K + ++ DD+Q FE ED
Sbjct: 163 PHEK---HFRPLRQRSSVDDHQE-FESED 187
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 497 (180.0 bits), Expect = 3.4e-83, Sum P(2) = 3.4e-83
Identities = 90/191 (47%), Positives = 139/191 (72%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+DAE F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 204 FGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 263
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ +LQ+H++ GDIL+F+ GQ+ E + + + L A L + PIY LP
Sbjct: 264 EAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAVLPIYSQLP 322
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +NP+ GM++L +
Sbjct: 323 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIY 382
Query: 623 PISKASANQRT 633
PIS+A+ANQR+
Sbjct: 383 PISQANANQRS 393
Score = 364 (133.2 bits), Expect = 3.4e-83, Sum P(2) = 3.4e-83
Identities = 72/161 (44%), Positives = 102/161 (63%)
Query: 287 DDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYP 346
+D + + E K D ++ E + A K ++ E+R+ LPI+ ++ELL + +
Sbjct: 32 EDGKVDYRTEQKFADHMKKKSEASSEFAKKKSI---LEQRQYLPIFAVQQELLTIIRDNS 88
Query: 347 VLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEV 406
++++VGETGSGKTTQ+ QYL+E GYT G IGCTQ +EMG LG EV
Sbjct: 89 IVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEV 148
Query: 407 GYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
GY+IRFEDCTS+ T++KYMTDG+LLRE + E L+ YS +I
Sbjct: 149 GYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAII 189
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 474 (171.9 bits), Expect = 6.7e-83, Sum P(3) = 6.7e-83
Identities = 90/191 (47%), Positives = 137/191 (71%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+D+ F+ +FG+ P F IP R + V++ ++K DY+
Sbjct: 667 FGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYV 726
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
E+A+ ALQ+H+ GD+L+F+ GQ+ E E+L++R + A L I PIY LP
Sbjct: 727 ESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNAPA-LSILPIYSQLP 785
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
++LQAKIF+ + +G RK V+ATNIAETSLT+DGI YVID G+ K+K YNP+ GM++L +
Sbjct: 786 SDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIY 845
Query: 623 PISKASANQRT 633
PIS+A+ANQR+
Sbjct: 846 PISQANANQRS 856
Score = 379 (138.5 bits), Expect = 6.7e-83, Sum P(3) = 6.7e-83
Identities = 85/214 (39%), Positives = 128/214 (59%)
Query: 252 LVGQEGLQRCSHESDKQQRKKADLKY----GSK-------NKKQQYDDYQYV-------F 293
L+ ++G + ++++R+KA K+ G+K + Q DD ++ +
Sbjct: 441 LLARKGSALVRNYREQKERRKAQKKHWELSGTKLGNIMGVQRPQDEDDMRFDKEKDKADY 500
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
+ K D R+ + KS S + + E+R+ LP++ R+ELL + E V++IVGE
Sbjct: 501 RKDQKFADHMRDQ-DTGGKSDF-SRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGE 558
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TGSGKTTQ+ QYL+E GY+K+G IGCTQ EM +LG +VGY+IRFE
Sbjct: 559 TGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFE 618
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
DCTS++TV+KYMTDG+LLRE + +P L+SYS +I
Sbjct: 619 DCTSERTVIKYMTDGILLRESLRDPELDSYSAII 652
Score = 45 (20.9 bits), Expect = 6.7e-83, Sum P(3) = 6.7e-83
Identities = 16/78 (20%), Positives = 32/78 (41%)
Query: 151 DQRGKEELERRIRERDVAATRKLTGPKLTWKEEY-DAIQRSRKDDGIENLREVSRQKYLP 209
D + E+L ++RE G +E + IQR RK + + R +
Sbjct: 102 DTKSFEKLRGQLREHKDDTPSHTGGVSEKARERLREHIQRDRKRGPVSSTAAEGRDRDRD 161
Query: 210 KRAQKKLEEIKDRTKDKE 227
++ + +DR +D++
Sbjct: 162 WDRDRRRDRDRDRDRDRD 179
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 536 (193.7 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 113/196 (57%), Positives = 143/196 (72%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL ++I R DLKL++ SATLDA F YF +AP+ K+P R + VE+FYT PE DY+EA
Sbjct: 208 VLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEA 267
Query: 505 AIVTALQIHVNEPI-GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
AI T +QIH+ E I GDIL+FLTGQ++ E A + +K+ LG++I EL P+Y LP
Sbjct: 268 AIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPP 327
Query: 564 ELQAKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
LQ +IFEP P GA RKVV++TNIAETSLTIDG+ +VIDPGFAK K YNP+ +E
Sbjct: 328 NLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 387
Query: 618 SLLVNPISKASANQRT 633
SLLV+PISKASA QR+
Sbjct: 388 SLLVSPISKASAQQRS 403
Score = 310 (114.2 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 60/127 (47%), Positives = 86/127 (67%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGCT 380
L ++R LP++ ++ + ++ +S + +V+VGETGSGKTTQIPQ+ + +K K + CT
Sbjct: 65 LYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVSCT 124
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q +EM VKLG EVGYSIRFEDC++ KT+LKYMTDGMLLRE + +P L
Sbjct: 125 QPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPML 184
Query: 441 ESYSVLI 447
+ Y V++
Sbjct: 185 DQYQVIL 191
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 491 (177.9 bits), Expect = 6.3e-81, Sum P(2) = 6.3e-81
Identities = 91/185 (49%), Positives = 135/185 (72%)
Query: 449 LINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVT 508
++ R DLKL+++SAT++A+ FSD+FG AP F IP R + V++ ++++P DY++ A+
Sbjct: 442 ILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQ 501
Query: 509 ALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAK 568
L IHV+ GDILVF+TGQ+ E E++++R L +L I PIY +P +LQAK
Sbjct: 502 VLNIHVSMGTGDILVFMTGQEDIEVTCELVRERLDALNDP-PKLSILPIYSQMPADLQAK 560
Query: 569 IFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKAS 628
IF+ P G RK ++ATNIAETSLT+DGI YV+D G++K+K YNPK GM++L + PIS+A+
Sbjct: 561 IFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQAN 620
Query: 629 ANQRT 633
A+QR+
Sbjct: 621 ASQRS 625
Score = 359 (131.4 bits), Expect = 6.3e-81, Sum P(2) = 6.3e-81
Identities = 74/161 (45%), Positives = 106/161 (65%)
Query: 288 DYQYVFEIE-DKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYP 346
D Q E++ +K + F E ++ D ++ S + ++E+R+ LP + RE+L++ + +
Sbjct: 261 DDQAPAEVKAEKSDNKFSEHMKKNDGASNFSQTKSIREQREFLPAFAVREDLMRVIRDNQ 320
Query: 347 VLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEV 406
V+++VGETGSGKTTQ+ Q+LYE GY + G IGCTQ +EM VKLG V
Sbjct: 321 VIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGCTQPRRVAAMSVAKRVSEEMEVKLGGTV 380
Query: 407 GYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
GY+IRFEDCTS TV+KYMTDG+LLRE + EP L+ YS +I
Sbjct: 381 GYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLDRYSCII 421
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 446 (162.1 bits), Expect = 6.3e-79, Sum P(3) = 6.3e-79
Identities = 84/191 (43%), Positives = 127/191 (66%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+DAE F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 665 FGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 724
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ +LQ+H++ GDIL+F+ GQ+ E + + + L A L + PIY LP
Sbjct: 725 EAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAVLPIYSQLP 783
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +P G L +
Sbjct: 784 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIM 843
Query: 623 PISKASANQRT 633
I K N T
Sbjct: 844 EIQKIQKNINT 854
Score = 376 (137.4 bits), Expect = 6.3e-79, Sum P(3) = 6.3e-79
Identities = 84/214 (39%), Positives = 126/214 (58%)
Query: 250 LDLVGQEGLQRCSHESDKQQRKKADLKY----GSK-------NKKQQYD-----DYQYVF 293
L ++ ++G Q ++++RKKA K+ G+K K+++ D D + +
Sbjct: 440 LAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEPDKSLTEDGKVDY 499
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
E K D ++ E + A K ++ E+R+ LPI+ ++ELL + + ++++VGE
Sbjct: 500 RTEQKFADHMKKKSEASSEFAKKKSI---LEQRQYLPIFAVQQELLTIIRDNSIVIVVGE 556
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TGSGKTTQ+ QYL+E GYT G IGCTQ +EMG LG EVGY+IRFE
Sbjct: 557 TGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFE 616
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
DCTS+ T++KYMTDG+LLRE + E L+ YS +I
Sbjct: 617 DCTSESTLIKYMTDGILLRESLREADLDHYSAII 650
Score = 39 (18.8 bits), Expect = 6.3e-79, Sum P(3) = 6.3e-79
Identities = 10/45 (22%), Positives = 24/45 (53%)
Query: 204 RQKYLPKRAQKKLE-EIKDRTKDKENLFEGQKLTGAELCELDYEK 247
R+++L K+ QK++ + + +D E + LT + L+ ++
Sbjct: 351 REQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLEVDE 395
Score = 37 (18.1 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 27/141 (19%), Positives = 52/141 (36%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R R E R R +D A T + TW+EE SR+ S +
Sbjct: 190 RSSRRNEPESPRHRPKDAA-----TPSRSTWEEEDSGYGSSRRSQWESPSPTPSYRD--S 242
Query: 210 KRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQ 269
+R+ + +DR + + + T Y + D R S +++
Sbjct: 243 ERSHRPSS--RDRDRSVRSRYSDD--TPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRRE 298
Query: 270 RKKADLKYGSKNKKQQYDDYQ 290
+ + + ++ ++QQ++D Q
Sbjct: 299 DGEEGISFDTEEERQQWEDDQ 319
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 482 (174.7 bits), Expect = 1.6e-78, Sum P(2) = 1.6e-78
Identities = 99/190 (52%), Positives = 133/190 (70%)
Query: 456 LKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHV- 514
LK++I SATLDAE FS YF +AP+ I R++ V+++YT+ + DY++AA++T LQIH+
Sbjct: 222 LKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIA 281
Query: 515 -----------NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
E GDILVFLTG+D+ E E++L R L +LI+CPI+ LP
Sbjct: 282 HLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQ 341
Query: 564 ELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNP 623
E Q K+FE P+G+RKV+LATNIAETSLTI+GI+YV+D G K K +NPK G++SL + P
Sbjct: 342 EQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIP 401
Query: 624 ISKASANQRT 633
ISKASA QRT
Sbjct: 402 ISKASAKQRT 411
Score = 333 (122.3 bits), Expect = 1.6e-78, Sum P(2) = 1.6e-78
Identities = 71/163 (43%), Positives = 105/163 (64%)
Query: 293 FEIEDKIVDFFRESVE-LPDKSAVKSALEMLQE-------ERKTLPIYPFREELLQAVSE 344
FE++ K V + S + + D + +K+ LE+ +E ++++LP++ ++ LL+ E
Sbjct: 29 FELKKKPVQLQQISNDKINDNNNLKNQLEIPKEIPKEIKLQKESLPVFTAKDALLKNFKE 88
Query: 345 YPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGH 404
+ ++I+ ETG+GKTTQIPQYLYE GY G I TQ QEMGV+LG
Sbjct: 89 HSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAITQPRRVAAVSISKRVSQEMGVELGD 148
Query: 405 EVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+VGY +RF+D T++KT LKYMTDGML+RE +L+ SL YSV+I
Sbjct: 149 QVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVII 191
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 497 (180.0 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 106/197 (53%), Positives = 133/197 (67%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
+L ++ RPDLK++I SATLDAE F YF AP+ +P R Y VEL+YT + DY+++
Sbjct: 230 LLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDS 289
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILK----QRTRGLGTKIAELIICPIYGN 560
AI T LQIH E GDIL+FLTG+D+ E A + Q R G L + P+YG+
Sbjct: 290 AIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGC--GPLSVYPLYGS 347
Query: 561 LPTELQAKIFEPTPEG-----ARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTG 615
LP Q +IFEP PE RKVV++TNIAETSLTIDGI YV+DPGF+K K YNP+
Sbjct: 348 LPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIR 407
Query: 616 MESLLVNPISKASANQR 632
+ESLLV+PISKASA QR
Sbjct: 408 VESLLVSPISKASAQQR 424
Score = 291 (107.5 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 60/124 (48%), Positives = 80/124 (64%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLY--EAGYTKQGKIGCTQLX 383
R+ LP++ R+E L+ ++V VGETGSGKTTQIPQ++ E + + ++ CTQ
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149
Query: 384 XXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESY 443
+EM VKLG EVGYSIRFE+ TS+KT+LKYMTDGMLLRE + + L Y
Sbjct: 150 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209
Query: 444 SVLI 447
S +I
Sbjct: 210 SCII 213
Score = 45 (20.9 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 175 GPKLTWKEEY-DAIQRSRKDDGIENLREVSRQKYLPKR---AQKKLEEIKDRTKDKENLF 230
G K + E+ D ++ S + E E+S+Q LP E K + +
Sbjct: 2 GSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSAE 61
Query: 231 EGQKLTGAEL 240
E QKL ++
Sbjct: 62 EAQKLEDGKI 71
Score = 38 (18.4 bits), Expect = 5.1e-22, Sum P(3) = 5.1e-22
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 517 PIGDIL-VFLTGQDQFETAEEIL 538
P+ +L V L G +F+ ++EIL
Sbjct: 521 PLDPMLAVMLIGSFEFQCSQEIL 543
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 477 (173.0 bits), Expect = 7.6e-78, Sum P(2) = 7.6e-78
Identities = 94/178 (52%), Positives = 125/178 (70%)
Query: 456 LKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN 515
LKL+I SA+LDA FS+YFG A + R++ V++ YT PE+DY++A +VT QIH
Sbjct: 229 LKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIHFE 288
Query: 516 EPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPE 575
E GDILVFLTGQD+ E+ E ++++R + + +L+ I+ LP+E Q K+F P P
Sbjct: 289 EKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPT 348
Query: 576 GARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
G RKV+LATNIAETS+TI GI+YVIDPGF K +SY+P GMESL V P SKA QR+
Sbjct: 349 GFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRS 406
Score = 331 (121.6 bits), Expect = 7.6e-78, Sum P(2) = 7.6e-78
Identities = 73/156 (46%), Positives = 98/156 (62%)
Query: 296 EDKIVDFFRESVELPDKSAVKSALEMLQ---EERKTLPIYPFREELLQAVSEYPVLVIVG 352
+ ++ F + S P KS S M Q E R++LPI + L++ V + +L+IVG
Sbjct: 6 QGELKSFVQNSRPNP-KSPTVSPFSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVG 64
Query: 353 ETGSGKTTQIPQYLYEAGYTKQGK-IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIR 411
ETGSGKTTQ+PQ+LY AG+ ++GK IG TQ +E V+LG +VGYSIR
Sbjct: 65 ETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIR 124
Query: 412 FEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
F+D TS T LKYMTDG+LLRE +L+P L YSV+I
Sbjct: 125 FDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVII 160
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 492 (178.3 bits), Expect = 8.6e-78, Sum P(3) = 8.6e-78
Identities = 103/195 (52%), Positives = 136/195 (69%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL +++ R DLK+++ SATLDA F YF + P+ IP R + VE+FYT PE DY+EA
Sbjct: 249 VLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 308
Query: 505 AIVTALQIHV-NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
AI T +QIH+ E GD+L+FLTGQ++ + A + +K+ LG + ++ I P+Y LP
Sbjct: 309 AIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPP 368
Query: 564 ELQAKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ Q +IFEP P GA RKVV++TNIAETSLTIDG+ +VIDPGFAK K YNP+ +E
Sbjct: 369 QQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 428
Query: 618 SLLVNPISKASANQR 632
SLLV ISKASA QR
Sbjct: 429 SLLVTAISKASAQQR 443
Score = 291 (107.5 bits), Expect = 8.6e-78, Sum P(3) = 8.6e-78
Identities = 62/131 (47%), Positives = 82/131 (62%)
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK--- 376
E+L++ R LP++ ++E ++ + V+VGETGSGKTTQIPQ+ + + G
Sbjct: 103 EILKK-RLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRG 161
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL 436
+ CTQ EM V LG EVGYSIRFEDC+S KT+LKYMTDGMLLRE +
Sbjct: 162 VACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMN 221
Query: 437 EPSLESYSVLI 447
+P LE Y V+I
Sbjct: 222 DPLLERYGVII 232
Score = 45 (20.9 bits), Expect = 8.6e-78, Sum P(3) = 8.6e-78
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLTGPK-LTWKEEYDAIQRSRKDDGIENLREVSRQK 206
R RD+R K+ R RERD R + K A+ S GI L++ S +
Sbjct: 28 RDRDERSKDRDRDRDRERDRDRDRDRDRDRERDSKSSSAALSSSVSGSGILPLKQASMHQ 87
Query: 207 YL 208
+
Sbjct: 88 QI 89
Score = 44 (20.5 bits), Expect = 7.1e-49, Sum P(2) = 7.1e-49
Identities = 25/93 (26%), Positives = 38/93 (40%)
Query: 148 RLRDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRS--RKDDGIENLREVSRQ 205
R RD R ++ R RERD ++ ++ Q S ++ + NL R
Sbjct: 43 RERD-RDRDRDRDRDRERDSKSSSAALSSSVSGSGILPLKQASMHQQINPFTNLPHTPRY 101
Query: 206 -KYLPKRAQKKLEEIKDRTKDKENLFEGQKLTG 237
+ L KR Q + E K+R D N + L G
Sbjct: 102 YEILKKRLQLPVWEYKERFNDILNRHQSFVLVG 134
Score = 43 (20.2 bits), Expect = 1.4e-77, Sum P(3) = 1.4e-77
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 177 KLTWKEEYDAIQRSRKDDGIENLREVS-RQKYLPKRAQKKLEEIKDRTKDKE 227
+L +EY + + R DG + R+ R K + ++ + +DR +D++
Sbjct: 6 RLDLGDEYSS-SKKRSSDGKDRDRDRDERSKDRDRDRDRERDRDRDRDRDRD 56
Score = 38 (18.4 bits), Expect = 4.6e-77, Sum P(3) = 4.6e-77
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 188 QRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKE 227
+R R D G E R R + + E KDR +D++
Sbjct: 3 KRHRLDLGDEYSSSKKRSSDGKDRDRDRDERSKDRDRDRD 42
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 478 (173.3 bits), Expect = 1.0e-77, Sum P(2) = 1.0e-77
Identities = 93/189 (49%), Positives = 136/189 (71%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
+L ++ R DLKL+++SAT++AE FS +FG AP F IP R + V++ +++ P DY+++
Sbjct: 323 LLKKILARRRDLKLIVTSATMNAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDYVDS 382
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTE 564
A+ L IHV++ GDILVF+TGQ+ E E++ +R + L +L I PIY +P E
Sbjct: 383 AVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERLKLLNDP-PKLSILPIYSQMPAE 441
Query: 565 LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPI 624
QAKIFE G RKV++ATNIAETSLT+DGI +V+D G++K+K YNPK GM++L + PI
Sbjct: 442 QQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPI 501
Query: 625 SKASANQRT 633
S+A+ANQR+
Sbjct: 502 SQANANQRS 510
Score = 340 (124.7 bits), Expect = 1.0e-77, Sum P(2) = 1.0e-77
Identities = 71/156 (45%), Positives = 98/156 (62%)
Query: 292 VFEIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIV 351
V++ +K ++ E S KS + L+E+R+ LP + RE+LL+ + + V+V+V
Sbjct: 153 VYKGGNKFAHHMKKQDEGGQSSFSKS--KTLREQREFLPAFAVREDLLRVIRDNQVVVVV 210
Query: 352 GETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIR 411
GETGSGKTTQ+ Q+LYE GY K G IGCTQ +EM V LG VGY+IR
Sbjct: 211 GETGSGKTTQLTQFLYEDGYAKFGMIGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIR 270
Query: 412 FEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
FEDCT T +KYMTDG+LLRE +++ L+ YS +I
Sbjct: 271 FEDCTGPNTAIKYMTDGVLLRESLVQTDLDKYSCII 306
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 494 (179.0 bits), Expect = 1.2e-77, Sum P(3) = 1.2e-77
Identities = 103/195 (52%), Positives = 137/195 (70%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL +++ R DLK+++ SATLDA F YF + P+ IP R + VE+FYT PE DY+EA
Sbjct: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 334
Query: 505 AIVTALQIHV-NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
AI T +QIH+ E GD+L+FLTGQ++ + A + +K+ LG ++ ++ I P+Y LP
Sbjct: 335 AIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 564 ELQAKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ Q +IFEP P GA RKVV++TNIAETSLTIDG+ +VIDPGFAK K YNP+ +E
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 618 SLLVNPISKASANQR 632
SLLV ISKASA QR
Sbjct: 455 SLLVTAISKASAQQR 469
Score = 288 (106.4 bits), Expect = 1.2e-77, Sum P(3) = 1.2e-77
Identities = 60/127 (47%), Positives = 78/127 (61%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK---IGCT 380
++R LP++ +++ + + V+VGETGSGKTTQIPQ+ E + G + CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q EM V LG EVGYSIRFEDC+S KT+LKYMTDGMLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 441 ESYSVLI 447
E Y V+I
Sbjct: 252 ERYGVII 258
Score = 47 (21.6 bits), Expect = 1.2e-77, Sum P(3) = 1.2e-77
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 177 KLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLT 236
+L +E+Y + ++ DG + R+ R+ R +++ ++R ++KE E + T
Sbjct: 6 RLDLEEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKELRAST 65
Query: 237 GAEL 240
A L
Sbjct: 66 NAML 69
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 494 (179.0 bits), Expect = 2.0e-77, Sum P(3) = 2.0e-77
Identities = 103/195 (52%), Positives = 137/195 (70%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL +++ R DLK+++ SATLDA F YF + P+ IP R + VE+FYT PE DY+EA
Sbjct: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 334
Query: 505 AIVTALQIHV-NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
AI T +QIH+ E GD+L+FLTGQ++ + A + +K+ LG ++ ++ I P+Y LP
Sbjct: 335 AIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 564 ELQAKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ Q +IFEP P GA RKVV++TNIAETSLTIDG+ +VIDPGFAK K YNP+ +E
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 618 SLLVNPISKASANQR 632
SLLV ISKASA QR
Sbjct: 455 SLLVTAISKASAQQR 469
Score = 288 (106.4 bits), Expect = 2.0e-77, Sum P(3) = 2.0e-77
Identities = 60/127 (47%), Positives = 78/127 (61%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK---IGCT 380
++R LP++ +++ + + V+VGETGSGKTTQIPQ+ E + G + CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q EM V LG EVGYSIRFEDC+S KT+LKYMTDGMLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 441 ESYSVLI 447
E Y V+I
Sbjct: 252 ERYGVII 258
Score = 45 (20.9 bits), Expect = 2.0e-77, Sum P(3) = 2.0e-77
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 177 KLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLT 236
+L E+Y + ++ DG + R+ R+ R +++ ++R ++KE E + T
Sbjct: 6 RLDLGEDYPSGKKRAGTDGKDRERDRDREDRSKDRDRERDRGDREREREKEKEKELRAST 65
Query: 237 GAEL 240
A L
Sbjct: 66 NAML 69
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 494 (179.0 bits), Expect = 2.0e-77, Sum P(3) = 2.0e-77
Identities = 103/195 (52%), Positives = 137/195 (70%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL +++ R DLK+++ SATLDA F YF + P+ IP R + VE+FYT PE DY+EA
Sbjct: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 334
Query: 505 AIVTALQIHV-NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
AI T +QIH+ E GD+L+FLTGQ++ + A + +K+ LG ++ ++ I P+Y LP
Sbjct: 335 AIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 564 ELQAKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ Q +IFEP P GA RKVV++TNIAETSLTIDG+ +VIDPGFAK K YNP+ +E
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 618 SLLVNPISKASANQR 632
SLLV ISKASA QR
Sbjct: 455 SLLVTAISKASAQQR 469
Score = 288 (106.4 bits), Expect = 2.0e-77, Sum P(3) = 2.0e-77
Identities = 60/127 (47%), Positives = 78/127 (61%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK---IGCT 380
++R LP++ +++ + + V+VGETGSGKTTQIPQ+ E + G + CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q EM V LG EVGYSIRFEDC+S KT+LKYMTDGMLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 441 ESYSVLI 447
E Y V+I
Sbjct: 252 ERYGVII 258
Score = 45 (20.9 bits), Expect = 2.0e-77, Sum P(3) = 2.0e-77
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 177 KLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLT 236
+L E+Y + ++ DG + R+ R+ R +++ ++R ++KE E + T
Sbjct: 6 RLDLGEDYPSGKKRAGTDGKDRERDRDREDRSKDRDRERDRGDREREREKEKEKELRAST 65
Query: 237 GAEL 240
A L
Sbjct: 66 NAML 69
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 494 (179.0 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 103/195 (52%), Positives = 137/195 (70%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL +++ R DLK+++ SATLDA F YF + P+ IP R + VE+FYT PE DY+EA
Sbjct: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 334
Query: 505 AIVTALQIHV-NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
AI T +QIH+ E GD+L+FLTGQ++ + A + +K+ LG ++ ++ I P+Y LP
Sbjct: 335 AIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 564 ELQAKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ Q +IFEP P GA RKVV++TNIAETSLTIDG+ +VIDPGFAK K YNP+ +E
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 618 SLLVNPISKASANQR 632
SLLV ISKASA QR
Sbjct: 455 SLLVTAISKASAQQR 469
Score = 288 (106.4 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 60/127 (47%), Positives = 78/127 (61%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK---IGCT 380
++R LP++ +++ + + V+VGETGSGKTTQIPQ+ E + G + CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q EM V LG EVGYSIRFEDC+S KT+LKYMTDGMLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 441 ESYSVLI 447
E Y V+I
Sbjct: 252 ERYGVII 258
Score = 44 (20.5 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 177 KLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLT 236
+L E+Y + ++ DG + R+ R+ R +++ ++R ++KE E + T
Sbjct: 6 RLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKELRAST 65
Query: 237 GAEL 240
A L
Sbjct: 66 NAML 69
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 494 (179.0 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 103/195 (52%), Positives = 137/195 (70%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL +++ R DLK+++ SATLDA F YF + P+ IP R + VE+FYT PE DY+EA
Sbjct: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 334
Query: 505 AIVTALQIHV-NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
AI T +QIH+ E GD+L+FLTGQ++ + A + +K+ LG ++ ++ I P+Y LP
Sbjct: 335 AIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 564 ELQAKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ Q +IFEP P GA RKVV++TNIAETSLTIDG+ +VIDPGFAK K YNP+ +E
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 618 SLLVNPISKASANQR 632
SLLV ISKASA QR
Sbjct: 455 SLLVTAISKASAQQR 469
Score = 288 (106.4 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 60/127 (47%), Positives = 78/127 (61%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK---IGCT 380
++R LP++ +++ + + V+VGETGSGKTTQIPQ+ E + G + CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q EM V LG EVGYSIRFEDC+S KT+LKYMTDGMLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 441 ESYSVLI 447
E Y V+I
Sbjct: 252 ERYGVII 258
Score = 44 (20.5 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 177 KLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLT 236
+L E+Y + ++ DG + R+ R+ R +++ ++R ++KE E + T
Sbjct: 6 RLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKELRAST 65
Query: 237 GAEL 240
A L
Sbjct: 66 NAML 69
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 494 (179.0 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 103/195 (52%), Positives = 137/195 (70%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL +++ R DLK+++ SATLDA F YF + P+ IP R + VE+FYT PE DY+EA
Sbjct: 275 VLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 334
Query: 505 AIVTALQIHV-NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
AI T +QIH+ E GD+L+FLTGQ++ + A + +K+ LG ++ ++ I P+Y LP
Sbjct: 335 AIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 564 ELQAKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ Q +IFEP P GA RKVV++TNIAETSLTIDG+ +VIDPGFAK K YNP+ +E
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 618 SLLVNPISKASANQR 632
SLLV ISKASA QR
Sbjct: 455 SLLVTAISKASAQQR 469
Score = 288 (106.4 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 60/127 (47%), Positives = 78/127 (61%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK---IGCT 380
++R LP++ +++ + + V+VGETGSGKTTQIPQ+ E + G + CT
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACT 191
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q EM V LG EVGYSIRFEDC+S KT+LKYMTDGMLLRE + +P L
Sbjct: 192 QPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLL 251
Query: 441 ESYSVLI 447
E Y V+I
Sbjct: 252 ERYGVII 258
Score = 44 (20.5 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 177 KLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLT 236
+L E+Y + ++ DG + R+ R+ R +++ ++R ++KE E + T
Sbjct: 6 RLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKELRAST 65
Query: 237 GAEL 240
A L
Sbjct: 66 NAML 69
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 493 (178.6 bits), Expect = 2.8e-77, Sum P(3) = 2.8e-77
Identities = 103/195 (52%), Positives = 137/195 (70%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL +++ R DLK+++ SATLDA F YF + P+ IP R + VE+FYT PE DY+EA
Sbjct: 242 VLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEA 301
Query: 505 AIVTALQIHV-NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPT 563
AI T +QIH+ E GD+L+FLTGQ++ + A + +K+ LG ++ ++ I P+Y LP
Sbjct: 302 AIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPP 361
Query: 564 ELQAKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ Q +IFEP P GA RKVV++TNIAETSLTIDG+ +VIDPGFAK K YNP+ +E
Sbjct: 362 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 421
Query: 618 SLLVNPISKASANQR 632
SLLV ISKASA QR
Sbjct: 422 SLLVTAISKASAQQR 436
Score = 291 (107.5 bits), Expect = 2.8e-77, Sum P(3) = 2.8e-77
Identities = 62/128 (48%), Positives = 79/128 (61%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQ----YLYEAGYTKQGKIGC 379
++R LP++ ++E + + V+VGETGSGKTTQIPQ Y+ K+G + C
Sbjct: 99 KKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRG-VAC 157
Query: 380 TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPS 439
TQ EM V LG EVGYSIRFEDC+S KT+LKYMTDGMLLRE + +P
Sbjct: 158 TQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPL 217
Query: 440 LESYSVLI 447
LE Y V+I
Sbjct: 218 LERYGVII 225
Score = 38 (18.4 bits), Expect = 2.8e-77, Sum P(3) = 2.8e-77
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 185 DAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKE 227
D ++ DG + R+ R + + + +DR ++KE
Sbjct: 12 DYSSSKKRSDGKDRDRDRDRDDRKDRDRDRDRDRDRDREREKE 54
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 469 (170.2 bits), Expect = 7.5e-75, Sum P(2) = 7.5e-75
Identities = 91/185 (49%), Positives = 129/185 (69%)
Query: 449 LINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVT 508
+I RP L+++I SATL+AE FS++F A I I R+Y V++ YT PE DY++A + T
Sbjct: 235 IIKKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRT 294
Query: 509 ALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAK 568
Q+H P GDILVFLTGQD+ E E ++K ++ L + + ++ CP++ +LP E Q +
Sbjct: 295 IFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQ 354
Query: 569 IFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKAS 628
+F P RKVVL+TNIAETS+TI GI+YVID G AK+K +N K G+ESL V PIS+++
Sbjct: 355 VFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSA 414
Query: 629 ANQRT 633
A QR+
Sbjct: 415 AMQRS 419
Score = 312 (114.9 bits), Expect = 7.5e-75, Sum P(2) = 7.5e-75
Identities = 74/187 (39%), Positives = 105/187 (56%)
Query: 267 KQQRKKADLKYGSKN--KKQQYDDYQYVFEIED----KIVDFFRESVELPDKSAVKSALE 320
K KK + K SKN KK ++ + D ++V S E +++ +
Sbjct: 30 KAPNKKKNRK-ASKNTTKKSTVSVVNFLEQDTDFGANEVVGSDNSSPEKRSENSPSKRKD 88
Query: 321 MLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCT 380
+L E+RK LPI+ + L Q + + V+V+VGETGSGK+TQIPQ+L E Y ++G + T
Sbjct: 89 IL-EQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAIT 147
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q E G +LG +VGYSIRF+D TS KT +KY+TDGMLLRE++ +P L
Sbjct: 148 QPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPIL 207
Query: 441 ESYSVLI 447
Y LI
Sbjct: 208 SQYHTLI 214
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 429 (156.1 bits), Expect = 9.3e-75, Sum P(3) = 9.3e-75
Identities = 79/166 (47%), Positives = 118/166 (71%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+DA+ F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 668 FGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 727
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ ALQ+H++ GDILVF+ GQ+ E E + + L K L + PIY LP
Sbjct: 728 EAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLP 786
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVK 608
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K
Sbjct: 787 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 832
Score = 384 (140.2 bits), Expect = 9.3e-75, Sum P(3) = 9.3e-75
Identities = 84/214 (39%), Positives = 129/214 (60%)
Query: 250 LDLVGQEGLQRCSHESDKQQRKKADLKY----GSK-------NKKQQYD-----DYQYVF 293
L ++ ++G Q ++++RK+A K+ G+K K+++ D D + +
Sbjct: 443 LAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDY 502
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
E K + +E E + A K ++ E+R+ LPI+ ++ELL + + ++++VGE
Sbjct: 503 RTEQKFAEHMKEKSEARSEFAKKKSI---LEQRQYLPIFAVQQELLSILRDNSIVIVVGE 559
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TGSGKTTQ+ QYL+E GYT G IGCTQ +EMGV+LG EVGY+IRFE
Sbjct: 560 TGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFE 619
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
DCTS+ T++KYMTDG+LLRE + E L++YS +I
Sbjct: 620 DCTSENTIIKYMTDGILLRESLREADLDNYSAII 653
Score = 44 (20.5 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 28/134 (20%), Positives = 55/134 (41%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R R +++RR R+R V + P T +Y+ RK G + +SR +
Sbjct: 243 RSHRASRDIDRRDRDRSVRSRYSDKTPLPTPSYKYNEWADDRKHLG--STPRLSRGR--- 297
Query: 210 KRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQ 269
R + E I T+++ +E + + D + ++D E ++ SD+
Sbjct: 298 GRREDGEEGIAFETEEERQQWEDDQR------QADRDWYMMDEGYDEFHNPLAYSSDEYV 351
Query: 270 RKKADLKYGSKNKK 283
+K+ + K K+
Sbjct: 352 KKREQHLHKQKQKR 365
Score = 38 (18.4 bits), Expect = 9.3e-75, Sum P(3) = 9.3e-75
Identities = 13/67 (19%), Positives = 31/67 (46%)
Query: 182 EEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLE-EIKDRTKDKENLFEGQKLTGAEL 240
E YD E +++ R+++L K+ QK++ + + +D E + LT +
Sbjct: 334 EGYDEFHNPLAYSSDEYVKK--REQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVV 391
Query: 241 CELDYEK 247
++ ++
Sbjct: 392 HRIEVDE 398
Score = 37 (18.1 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 150 RDQRGK-EELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGI-ENLREVSRQKY 207
RD+ G +E E +R +TRK ++ + ++ G+ E E SRQ+
Sbjct: 83 RDEAGSPDEEEDEEEDRSGRSTRK----DRHYRSVH--VETPSYTGGVSEEFWERSRQRE 136
Query: 208 LPKRAQKKLEEIKDRTKDKEN 228
+R K++ + KE+
Sbjct: 137 RERREHGVFASSKEKERKKEH 157
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 429 (156.1 bits), Expect = 9.6e-75, Sum P(3) = 9.6e-75
Identities = 79/166 (47%), Positives = 118/166 (71%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+DA+ F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 671 FGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 730
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ ALQ+H++ GDILVF+ GQ+ E E + + L K L + PIY LP
Sbjct: 731 EAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEEL-EKAPALAVLPIYSQLP 789
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVK 608
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K
Sbjct: 790 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 835
Score = 384 (140.2 bits), Expect = 9.6e-75, Sum P(3) = 9.6e-75
Identities = 84/214 (39%), Positives = 129/214 (60%)
Query: 250 LDLVGQEGLQRCSHESDKQQRKKADLKY----GSK-------NKKQQYD-----DYQYVF 293
L ++ ++G Q ++++RK+A K+ G+K K+++ D D + +
Sbjct: 446 LAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDY 505
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
E K + +E E + A K ++ E+R+ LPI+ ++ELL + + ++++VGE
Sbjct: 506 RTEQKFAEHMKEKSEARSEFAKKKSI---LEQRQYLPIFAVQQELLSILRDNSIVIVVGE 562
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TGSGKTTQ+ QYL+E GYT G IGCTQ +EMGV+LG EVGY+IRFE
Sbjct: 563 TGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFE 622
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
DCTS+ T++KYMTDG+LLRE + E L++YS +I
Sbjct: 623 DCTSENTIIKYMTDGILLRESLREADLDNYSAII 656
Score = 44 (20.5 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 28/134 (20%), Positives = 55/134 (41%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R R +++RR R+R V + P T +Y+ RK G + +SR +
Sbjct: 246 RSHRASRDIDRRDRDRSVRSRYSDKTPLPTPSYKYNEWADDRKHLG--STPRLSRGR--- 300
Query: 210 KRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQ 269
R + E I T+++ +E + + D + ++D E ++ SD+
Sbjct: 301 GRREDGEEGIAFETEEERQQWEDDQR------QADRDWYMMDEGYDEFHNPLAYSSDEYV 354
Query: 270 RKKADLKYGSKNKK 283
+K+ + K K+
Sbjct: 355 KKREQHLHKQKQKR 368
Score = 38 (18.4 bits), Expect = 9.6e-75, Sum P(3) = 9.6e-75
Identities = 13/67 (19%), Positives = 31/67 (46%)
Query: 182 EEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLE-EIKDRTKDKENLFEGQKLTGAEL 240
E YD E +++ R+++L K+ QK++ + + +D E + LT +
Sbjct: 337 EGYDEFHNPLAYSSDEYVKK--REQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVV 394
Query: 241 CELDYEK 247
++ ++
Sbjct: 395 HRIEVDE 401
Score = 37 (18.1 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 150 RDQRGK-EELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGI-ENLREVSRQKY 207
RD+ G +E E +R +TRK ++ + ++ G+ E E SRQ+
Sbjct: 86 RDEAGSPDEEEDEEEDRSGRSTRK----DRHYRSVH--VETPSYTGGVSEEFWERSRQRE 139
Query: 208 LPKRAQKKLEEIKDRTKDKEN 228
+R K++ + KE+
Sbjct: 140 RERREHGVFASSKEKERKKEH 160
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 489 (177.2 bits), Expect = 1.2e-74, Sum P(2) = 1.2e-74
Identities = 104/197 (52%), Positives = 136/197 (69%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
+L +++ RPDLK++I SATLDA+ F YF AP+ +P R + VE+FYT PE DY+EA
Sbjct: 236 LLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEA 295
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFE-TAEEILKQRTRGLGTKIA-ELIICPIYGNLP 562
AI T LQIH E GDIL+FLTG+++ E A +I + + A L + +YG+LP
Sbjct: 296 AIRTVLQIHATEDEGDILLFLTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYGSLP 355
Query: 563 TELQAKIFEPTPE----GAR---KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTG 615
+Q +IFEP P G R KV+++TNIAETSLTIDGI YV+DPGF+K K YNP+
Sbjct: 356 PHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIR 415
Query: 616 MESLLVNPISKASANQR 632
+ESLLV+PISKASA QR
Sbjct: 416 VESLLVSPISKASAQQR 432
Score = 292 (107.8 bits), Expect = 1.2e-74, Sum P(2) = 1.2e-74
Identities = 63/124 (50%), Positives = 78/124 (62%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQY--LYEAGYTKQGKIGCTQLX 383
R+ LP++ R+E LQ + +LV VGETGSGKTTQIPQ+ L + T++ I CTQ
Sbjct: 96 RRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIACTQPR 155
Query: 384 XXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESY 443
E+ V LG EVGYSIRFED TS KT+LKYMTDGMLLRE + + L Y
Sbjct: 156 RVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDHELSRY 215
Query: 444 SVLI 447
S +I
Sbjct: 216 STII 219
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 457 (165.9 bits), Expect = 4.2e-72, Sum P(3) = 4.2e-72
Identities = 96/196 (48%), Positives = 140/196 (71%)
Query: 449 LINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVT 508
L+ R DLKL+I+SAT++A+ FS +FG+AP F IP R + V+ YT P DY+EAA+
Sbjct: 492 LLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQ 551
Query: 509 ALQIHV-NE-PIGDILVFLTGQDQFETAEEILKQR-----TRGLGT----KIAELIICPI 557
A++IH+ N+ GDIL+F+TGQ+ ET + L+++ ++ GT +I ++ I PI
Sbjct: 552 AVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPI 611
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
Y LP +LQ KIF+ RK+++ATNIAETSLTI GI+YVID G++K+K YNPK G++
Sbjct: 612 YSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLD 671
Query: 618 SLLVNPISKASANQRT 633
SL++ PISKA+A+QR+
Sbjct: 672 SLVITPISKANADQRS 687
Score = 289 (106.8 bits), Expect = 4.2e-72, Sum P(3) = 4.2e-72
Identities = 65/131 (49%), Positives = 86/131 (65%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTK-QGK-IGC 379
++ ++ LP++ R +LL + E V+VI+GETGSGKTTQ+ QYLYE GY +GK I
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 380 TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCT-SDKTVLKYMTDGMLLREIVLEP 438
TQ EM V LG EVGYSIRFED T S+ T LK++TDG+LLRE +L+
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 439 SLESYS-VLID 448
+L+ YS V+ID
Sbjct: 463 TLDKYSCVIID 473
Score = 46 (21.3 bits), Expect = 4.2e-72, Sum P(3) = 4.2e-72
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 79 NTILDAAHYDADDDVI---RITASTNK-KRFRKRIGSEDDDDE 117
N +L+ +++D +I S NK K+F+ ++ +D++DE
Sbjct: 63 NELLELLKNKSEEDSTGPKKIAPSINKRKKFKIQLDLDDNEDE 105
Score = 40 (19.1 bits), Expect = 4.7e-46, Sum P(3) = 4.7e-46
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 279 SKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDK--SAVKSALEMLQEERKTLPIY---P 333
++N + DY+ ++V+ RE + D + V L L EE K LP+
Sbjct: 150 TQNGHAETKDYE---PTRSEVVEEDREWYDNDDDYGNLVPEPLSELPEEAKLLPVIRNID 206
Query: 334 FREELLQAVSEYPV 347
+ L V YP+
Sbjct: 207 NDDALRNTVQLYPI 220
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 475 (172.3 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 100/189 (52%), Positives = 129/189 (68%)
Query: 453 RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQI 512
RPDLK++I SATLDAE F +YF +AP+ +P R + VE++YT + DY++AAI T LQI
Sbjct: 239 RPDLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQI 298
Query: 513 HVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTK--IAELIICPIYGNLPTELQAKIF 570
H E GDIL+FLTG+++ E A + L + L + P+YG+LP Q KIF
Sbjct: 299 HATEGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQKIF 358
Query: 571 EPTPEG-------ARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNP 623
EP P RKV+++TNIAETSLTIDGI YV+DPGF+K K YNP+ +ESLLV+P
Sbjct: 359 EPAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSP 418
Query: 624 ISKASANQR 632
ISKASA QR
Sbjct: 419 ISKASAQQR 427
Score = 279 (103.3 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 75/206 (36%), Positives = 109/206 (52%)
Query: 244 DYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFF 303
+YE + + +E L+ H SDK +L + + + + +Q E K+ D
Sbjct: 17 NYEAEKIAEASEESLRTHPHPSDK-----IELIHHDQGEFKGLIRHQTTAEQAQKLEDGP 71
Query: 304 RESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIP 363
+ D + ++L+ R+ LP++ REE L+ ++V VGETGSGKTTQIP
Sbjct: 72 KNPFTGHDFTT--KYFDILKT-RRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIP 128
Query: 364 QY-LYEAGYTKQGK-IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTV 421
Q+ LY+ GK + CTQ EM V+LG EVGY+IRFE+ + KT+
Sbjct: 129 QFVLYDEMPHLTGKQVACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTI 188
Query: 422 LKYMTDGMLLREIVLEPSLESYSVLI 447
LKYMTDGMLLRE + + L YS +I
Sbjct: 189 LKYMTDGMLLREAMEDHDLTRYSCII 214
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 464 (168.4 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71
Identities = 98/192 (51%), Positives = 129/192 (67%)
Query: 448 DLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIV 507
+++ R D+K++I SATLDA F YF P+ +P R + VE+F+T E DY+EAAI
Sbjct: 222 EIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIR 281
Query: 508 TALQIHVNEPI-GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQ 566
T +QIH+ E + GDIL+FLTGQ++ E A + + + + LG L P+Y LP Q
Sbjct: 282 TVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQ 341
Query: 567 AKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLL 620
+IFEP P GA RK V++TNIAETSLTIDG+ +VIDPGF+K K YNP+ +ESLL
Sbjct: 342 QRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLL 401
Query: 621 VNPISKASANQR 632
V PISKASA QR
Sbjct: 402 VCPISKASAMQR 413
Score = 288 (106.4 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71
Identities = 61/132 (46%), Positives = 81/132 (61%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE-AGYTKQGK------ 376
E+R LP++ ++E+ ++ + + +VGETGSGKTTQIPQ+ E +QG+
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 377 -IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
+ CTQ +EM V LG EVGYSIRFEDC S++TVLKY TDGMLLRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 436 LEPSLESYSVLI 447
P L+ Y VLI
Sbjct: 191 NSPLLDKYKVLI 202
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 464 (168.4 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71
Identities = 98/192 (51%), Positives = 129/192 (67%)
Query: 448 DLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIV 507
+++ R D+K++I SATLDA F YF P+ +P R + VE+F+T E DY+EAAI
Sbjct: 222 EIVRNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIR 281
Query: 508 TALQIHVNEPI-GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQ 566
T +QIH+ E + GDIL+FLTGQ++ E A + + + + LG L P+Y LP Q
Sbjct: 282 TVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQ 341
Query: 567 AKIFEPTP----EGA--RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLL 620
+IFEP P GA RK V++TNIAETSLTIDG+ +VIDPGF+K K YNP+ +ESLL
Sbjct: 342 QRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLL 401
Query: 621 VNPISKASANQR 632
V PISKASA QR
Sbjct: 402 VCPISKASAMQR 413
Score = 288 (106.4 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71
Identities = 61/132 (46%), Positives = 81/132 (61%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE-AGYTKQGK------ 376
E+R LP++ ++E+ ++ + + +VGETGSGKTTQIPQ+ E +QG+
Sbjct: 71 EKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQAR 130
Query: 377 -IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
+ CTQ +EM V LG EVGYSIRFEDC S++TVLKY TDGMLLRE +
Sbjct: 131 LVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAM 190
Query: 436 LEPSLESYSVLI 447
P L+ Y VLI
Sbjct: 191 NSPLLDKYKVLI 202
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 447 (162.4 bits), Expect = 9.7e-71, Sum P(2) = 9.7e-71
Identities = 86/186 (46%), Positives = 122/186 (65%)
Query: 449 LINYRP-DLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIV 507
L+ R + K+LI+SATLD E S++F P+ +P + Y VE+ Y+K YIE+++
Sbjct: 143 LVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYPVEILYSKERPVSYIESSLK 202
Query: 508 TALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGT-KIAELIICPIYGNLPTELQ 566
A+ IHV EP GDIL+F+TGQD E L+++ R L + II P++G+LP E+Q
Sbjct: 203 VAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQ 262
Query: 567 AKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISK 626
++F P P R+ +++TNIAETSLT+DG+ YVID G+ K + YNP +GM SL V ISK
Sbjct: 263 VRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISK 322
Query: 627 ASANQR 632
ANQR
Sbjct: 323 VQANQR 328
Score = 296 (109.3 bits), Expect = 9.7e-71, Sum P(2) = 9.7e-71
Identities = 59/119 (49%), Positives = 79/119 (66%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LPI F E++++ V + V+VI+GETGSGK+TQ+ Q L+ GYTK G I TQ
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAV 63
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
QE+ V LG +VGY+IRFED T+ KT +KY+TDG+LLRE + P L+ YSV+I
Sbjct: 64 SVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVII 122
Score = 42 (19.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 475 GSAPIFKIPRRRYHVELFYTKAPE-ADYIEAAIVTA 509
G AP FK+P + + + P ++ +E+ I A
Sbjct: 654 GPAPSFKVPEEKTELSKNNAETPAVSENVESRIEAA 689
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 445 (161.7 bits), Expect = 1.2e-70, Sum P(2) = 1.2e-70
Identities = 82/179 (45%), Positives = 121/179 (67%)
Query: 456 LKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN 515
LK+++ SAT+D + FS YF AP+ + R++ +++FYTK P++DY++AA+V+ QIH
Sbjct: 175 LKVIVMSATMDVDQFSQYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQE 234
Query: 516 EPIG-DILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTP 574
P DILVFLTGQ++ E + + + L ++ + P+Y +LP Q ++F+ P
Sbjct: 235 APSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAP 294
Query: 575 EGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
+G RKV+L+TNIAETS+TI GIKYV+D G K K YNP+ G+E L V +SKA A QRT
Sbjct: 295 KGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRT 353
Score = 293 (108.2 bits), Expect = 1.2e-70, Sum P(2) = 1.2e-70
Identities = 60/123 (48%), Positives = 78/123 (63%)
Query: 325 ERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXX 384
+R+ LPI+ R LL + V++GETGSGKTTQIPQYLYEAG +QG I TQ
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRR 79
Query: 385 XXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS 444
E +LG VGY++RF+D TSD+T +K++TDGMLLRE + +P L YS
Sbjct: 80 VAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYS 139
Query: 445 VLI 447
V+I
Sbjct: 140 VVI 142
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 324 (119.1 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 61/131 (46%), Positives = 90/131 (68%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
++ D+ N+R +++++ISSATLDAE S YF APIF +P R+Y+V+++YT E++YI A
Sbjct: 573 IVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISA 632
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTE 564
++T LQIH+ + GDILVFL GQ + E ++ L+ + L K L+I PIY +LP E
Sbjct: 633 IVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVE 692
Query: 565 LQAKIFEPTPE 575
QA+IFE E
Sbjct: 693 YQARIFEDVTE 703
Score = 317 (116.6 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 79/241 (32%), Positives = 133/241 (55%)
Query: 209 PKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQ 268
P + K EE + DK + K ++ + + +KK ++ E +R + +S+K+
Sbjct: 324 PTDSTYKSEEESSSSGDKNH--RNNKYDSDKI-KHEKKKKKKSIMTDE--ER-NVDSNKR 377
Query: 269 --QRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEER 326
++K+++L ++ + + + +K + + ++ + K ++ + +ER
Sbjct: 378 SFEKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKK--MKKIIDER 435
Query: 327 KTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXX 386
K LPIY +R ++L+A+ +L++VGETGSGK+TQ+ QYLYE Y G I CTQ
Sbjct: 436 KRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIA 495
Query: 387 XXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVL 446
+EM VK+G EVGY IRF++ TS+ T + YMTDGM LR ++ P+LE SVL
Sbjct: 496 CIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVL 555
Query: 447 I 447
I
Sbjct: 556 I 556
Score = 184 (69.8 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 578 RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
RK++L+TNI ETS+TID I YVID G K K YNP +G+ESL+ P SKAS NQRT
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRT 858
Score = 108 (43.1 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 43/157 (27%), Positives = 80/157 (50%)
Query: 193 DDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDL 252
++ IE L++ +R+KYL +R ++KL+ I + D E L+ KL G +L EL + KKI ++
Sbjct: 60 EEYIEYLKKDARRKYLKEREKEKLD-ITKKLLDDELLYSTVKLEGKDLKELQFSKKIYNI 118
Query: 253 VGQ-----EGLQRCSH--ESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDK-IVDF-- 302
+ E LQ S+ + D + KK Y +N K Y Y +I +K I+ F
Sbjct: 119 AKENINLREKLQEESYYFQQDIDKNKKTQT-Y--ENDKVDKSLYNYDEQILNKGILKFGS 175
Query: 303 --FRESVELPDKSAVKSALEMLQEERKTLPIYPFREE 337
+++++ + + +++ RK++ F E+
Sbjct: 176 AISKQNIQKQNNNEFVFDDDIITTNRKSIKRESFEEK 212
Score = 46 (21.3 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 239 ELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDK 298
++ E D K + D+ ++ + +H+ D+ + K KN+K +D Y E +K
Sbjct: 700 DVTEEDNMKFLEDINDKKDERNKNHKDDENDENGENEK-NDKNEKNDKNDKNYKNEKNEK 758
Score = 45 (20.9 bits), Expect = 4.9e-40, Sum P(3) = 4.9e-40
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 267 KQQRKKADLKYGSK-NKKQQYDDYQYVFEIEDK 298
K++++K D++ +K +K ++YD Y ++ DK
Sbjct: 221 KKKKRKDDIESDNKCDKDEKYDKYGKFYK-RDK 252
Score = 44 (20.5 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 185 DAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTK-DKENLFE 231
D I +RK E+ E + K+ +K+ ++I+ K DK+ ++
Sbjct: 195 DIITTNRKSIKRESFEEKKMNESPTKKKKKRKDDIESDNKCDKDEKYD 242
Score = 44 (20.5 bits), Expect = 6.3e-40, Sum P(3) = 6.3e-40
Identities = 24/111 (21%), Positives = 46/111 (41%)
Query: 155 KEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIE--NLREVSRQKYLPKRA 212
K E +++ + R + K +++++ + + D +E +L K
Sbjct: 354 KHEKKKKKKSIMTDEERNVDSNKRSFEKKESELNENGLTDVVEFVHLESFYGMNEKEKEL 413
Query: 213 QKKLEEIKDRTKDK-ENLFEGQKLTGAELCELDYEK-----KILDLVGQEG 257
+K E+IK R + K + + + +K D K KIL LVG+ G
Sbjct: 414 EKLFEDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETG 464
Score = 41 (19.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 197 ENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQ 233
E++ E K+L KK E K+ KD EN G+
Sbjct: 699 EDVTEEDNMKFLEDINDKKDERNKNH-KDDENDENGE 734
Score = 39 (18.8 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 426 TDGMLLREIVLEPSLESYSVLIDLINY 452
T+ + R+I+L ++ S+ ID I Y
Sbjct: 797 TNNKIRRKIILSTNICETSITIDNIVY 823
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 324 (119.1 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 61/131 (46%), Positives = 90/131 (68%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
++ D+ N+R +++++ISSATLDAE S YF APIF +P R+Y+V+++YT E++YI A
Sbjct: 573 IVKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISA 632
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTE 564
++T LQIH+ + GDILVFL GQ + E ++ L+ + L K L+I PIY +LP E
Sbjct: 633 IVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVE 692
Query: 565 LQAKIFEPTPE 575
QA+IFE E
Sbjct: 693 YQARIFEDVTE 703
Score = 317 (116.6 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 79/241 (32%), Positives = 133/241 (55%)
Query: 209 PKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQ 268
P + K EE + DK + K ++ + + +KK ++ E +R + +S+K+
Sbjct: 324 PTDSTYKSEEESSSSGDKNH--RNNKYDSDKI-KHEKKKKKKSIMTDE--ER-NVDSNKR 377
Query: 269 --QRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEER 326
++K+++L ++ + + + +K + + ++ + K ++ + +ER
Sbjct: 378 SFEKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKK--MKKIIDER 435
Query: 327 KTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXX 386
K LPIY +R ++L+A+ +L++VGETGSGK+TQ+ QYLYE Y G I CTQ
Sbjct: 436 KRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIA 495
Query: 387 XXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVL 446
+EM VK+G EVGY IRF++ TS+ T + YMTDGM LR ++ P+LE SVL
Sbjct: 496 CIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVL 555
Query: 447 I 447
I
Sbjct: 556 I 556
Score = 184 (69.8 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 36/56 (64%), Positives = 43/56 (76%)
Query: 578 RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
RK++L+TNI ETS+TID I YVID G K K YNP +G+ESL+ P SKAS NQRT
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRT 858
Score = 108 (43.1 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 43/157 (27%), Positives = 80/157 (50%)
Query: 193 DDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDL 252
++ IE L++ +R+KYL +R ++KL+ I + D E L+ KL G +L EL + KKI ++
Sbjct: 60 EEYIEYLKKDARRKYLKEREKEKLD-ITKKLLDDELLYSTVKLEGKDLKELQFSKKIYNI 118
Query: 253 VGQ-----EGLQRCSH--ESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDK-IVDF-- 302
+ E LQ S+ + D + KK Y +N K Y Y +I +K I+ F
Sbjct: 119 AKENINLREKLQEESYYFQQDIDKNKKTQT-Y--ENDKVDKSLYNYDEQILNKGILKFGS 175
Query: 303 --FRESVELPDKSAVKSALEMLQEERKTLPIYPFREE 337
+++++ + + +++ RK++ F E+
Sbjct: 176 AISKQNIQKQNNNEFVFDDDIITTNRKSIKRESFEEK 212
Score = 46 (21.3 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 239 ELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDK 298
++ E D K + D+ ++ + +H+ D+ + K KN+K +D Y E +K
Sbjct: 700 DVTEEDNMKFLEDINDKKDERNKNHKDDENDENGENEK-NDKNEKNDKNDKNYKNEKNEK 758
Score = 45 (20.9 bits), Expect = 4.9e-40, Sum P(3) = 4.9e-40
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 267 KQQRKKADLKYGSK-NKKQQYDDYQYVFEIEDK 298
K++++K D++ +K +K ++YD Y ++ DK
Sbjct: 221 KKKKRKDDIESDNKCDKDEKYDKYGKFYK-RDK 252
Score = 44 (20.5 bits), Expect = 1.1e-68, Sum P(4) = 1.1e-68
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 185 DAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTK-DKENLFE 231
D I +RK E+ E + K+ +K+ ++I+ K DK+ ++
Sbjct: 195 DIITTNRKSIKRESFEEKKMNESPTKKKKKRKDDIESDNKCDKDEKYD 242
Score = 44 (20.5 bits), Expect = 6.3e-40, Sum P(3) = 6.3e-40
Identities = 24/111 (21%), Positives = 46/111 (41%)
Query: 155 KEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIE--NLREVSRQKYLPKRA 212
K E +++ + R + K +++++ + + D +E +L K
Sbjct: 354 KHEKKKKKKSIMTDEERNVDSNKRSFEKKESELNENGLTDVVEFVHLESFYGMNEKEKEL 413
Query: 213 QKKLEEIKDRTKDK-ENLFEGQKLTGAELCELDYEK-----KILDLVGQEG 257
+K E+IK R + K + + + +K D K KIL LVG+ G
Sbjct: 414 EKLFEDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETG 464
Score = 41 (19.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 197 ENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQ 233
E++ E K+L KK E K+ KD EN G+
Sbjct: 699 EDVTEEDNMKFLEDINDKKDERNKNH-KDDENDENGE 734
Score = 39 (18.8 bits), Expect = 4.5e-24, Sum P(3) = 4.5e-24
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 426 TDGMLLREIVLEPSLESYSVLIDLINY 452
T+ + R+I+L ++ S+ ID I Y
Sbjct: 797 TNNKIRRKIILSTNICETSITIDNIVY 823
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 426 (155.0 bits), Expect = 4.4e-68, Sum P(2) = 4.4e-68
Identities = 90/192 (46%), Positives = 129/192 (67%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----------SAPIFKIPRRRYHVELFYTKAPEADYI 502
R DL+L+++SATLDAE F D+F ++ I + R + V++FY ++P DYI
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYI 258
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-TKIAE-LIICPIYGN 560
++ + TA++IH E GDIL FLTGQ++ ET +L ++ R L T + + L + P+Y
Sbjct: 259 KSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAG 318
Query: 561 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLL 620
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNPKT +E L+
Sbjct: 319 LPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLV 378
Query: 621 VNPISKASANQR 632
V P+SKASANQR
Sbjct: 379 VVPVSKASANQR 390
Score = 317 (116.6 bits), Expect = 4.4e-68, Sum P(2) = 4.4e-68
Identities = 62/128 (48%), Positives = 85/128 (66%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
++++R+ LP++ R +L V Y LVIVGETG GK+TQIPQYL EAG+T +G++ G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDK-TVLKYMTDGMLLREIVLEPS 439
Q E G LGHEVGY IRF+DCT + T +K++TDGML+RE++ +P
Sbjct: 107 QPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPL 166
Query: 440 LESYSVLI 447
L YSVL+
Sbjct: 167 LTRYSVLM 174
Score = 37 (18.1 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 542 TRGLGTKIAELIICPIYGNLPTE 564
T LG +IAE + P++ + E
Sbjct: 478 TEPLGMRIAEFPLNPMFAKMLLE 500
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 424 (154.3 bits), Expect = 3.2e-67, Sum P(2) = 3.2e-67
Identities = 91/192 (47%), Positives = 128/192 (66%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+LL++SATLDAE F D+F S P I + R + V++FY ++P DYI
Sbjct: 191 RGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYI 250
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-TKIAE-LIICPIYGN 560
++ + T ++IH E GDIL FLTGQ++ ET +L ++ R LG T + L + P+Y
Sbjct: 251 KSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAG 310
Query: 561 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLL 620
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNP+T +E L+
Sbjct: 311 LPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLV 370
Query: 621 VNPISKASANQR 632
V P+S+ASANQR
Sbjct: 371 VAPVSQASANQR 382
Score = 312 (114.9 bits), Expect = 3.2e-67, Sum P(2) = 3.2e-67
Identities = 60/130 (46%), Positives = 87/130 (66%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
++++R+ LP++ R +L V Y +VIVGETG GK+TQIPQYL EAG+T +G++ G T
Sbjct: 39 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 98
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDGMLLREIVLEPS 439
Q +E G LGHEVGY IRF+DCT T +K++TDGML+RE++++P
Sbjct: 99 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 158
Query: 440 LESYS-VLID 448
L YS +++D
Sbjct: 159 LTKYSAIMLD 168
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 424 (154.3 bits), Expect = 3.4e-67, Sum P(2) = 3.4e-67
Identities = 91/192 (47%), Positives = 128/192 (66%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+LL++SATLDAE F D+F S P I + R + V++FY ++P DYI
Sbjct: 199 RGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYI 258
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-TKIAE-LIICPIYGN 560
++ + T ++IH E GDIL FLTGQ++ ET +L ++ R LG T + L + P+Y
Sbjct: 259 KSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAG 318
Query: 561 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLL 620
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNP+T +E L+
Sbjct: 319 LPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLV 378
Query: 621 VNPISKASANQR 632
V P+S+ASANQR
Sbjct: 379 VAPVSQASANQR 390
Score = 312 (114.9 bits), Expect = 3.4e-67, Sum P(2) = 3.4e-67
Identities = 60/130 (46%), Positives = 87/130 (66%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
++++R+ LP++ R +L V Y +VIVGETG GK+TQIPQYL EAG+T +G++ G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDGMLLREIVLEPS 439
Q +E G LGHEVGY IRF+DCT T +K++TDGML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 440 LESYS-VLID 448
L YS +++D
Sbjct: 167 LTKYSAIMLD 176
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 424 (154.3 bits), Expect = 4.4e-67, Sum P(2) = 4.4e-67
Identities = 91/192 (47%), Positives = 128/192 (66%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+L+++SATLDAE F D+F S P I + R + V++FY ++P DYI
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPDYI 258
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-TKIAE-LIICPIYGN 560
++ + T ++IH E GDIL FLTGQ++ ET +L ++ R LG T + L I P+Y
Sbjct: 259 KSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMYAG 318
Query: 561 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLL 620
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNP+T +E L+
Sbjct: 319 LPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLV 378
Query: 621 VNPISKASANQR 632
V P+S+ASANQR
Sbjct: 379 VVPVSQASANQR 390
Score = 311 (114.5 bits), Expect = 4.4e-67, Sum P(2) = 4.4e-67
Identities = 58/130 (44%), Positives = 88/130 (67%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
++++R+ LP++ R +L + Y +VI+GETG GK+TQIPQYL EAG+T +G++ G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDGMLLREIVLEPS 439
Q +E G LGHEVGY IRF+DCT+ T +K++TDGML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPL 166
Query: 440 LESYS-VLID 448
L YS +++D
Sbjct: 167 LTKYSAIMLD 176
Score = 37 (18.1 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 542 TRGLGTKIAELIICPIYGNLPTE 564
T LG +IAE + P++ + E
Sbjct: 476 TEPLGMRIAEFPLNPMFAKMLLE 498
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 389 (142.0 bits), Expect = 4.5e-67, Sum P(2) = 4.5e-67
Identities = 84/195 (43%), Positives = 123/195 (63%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVE-----LFYTKAPEAD-YIEA 504
N P LK+++ SATL+ E S ++G+ P+F IP R Y V+ L K E+ Y++
Sbjct: 165 NKTP-LKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKE 223
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTK-------IAELIICPI 557
+ L +H NE GDILVFLTGQ + E A ++L ++ L + + L+I +
Sbjct: 224 VVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSL 283
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++PT+ Q +IF+P P+G RK V+ATNIA TSLTIDGI+Y++D GF K ++N + G++
Sbjct: 284 YGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLD 343
Query: 618 SLLVNPISKASANQR 632
L V PISK+ A QR
Sbjct: 344 ILEVVPISKSEAQQR 358
Score = 360 (131.8 bits), Expect = 4.5e-67, Sum P(2) = 4.5e-67
Identities = 68/135 (50%), Positives = 92/135 (68%)
Query: 313 SAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYT 372
S K + E E K LPIY ++++L+QAV E L++ GETGSGKTTQ+PQYLY+AG +
Sbjct: 2 STKKRSSETEHHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLS 61
Query: 373 KQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLR 432
+ G+IG TQ EM V+LG EVGY +RF+DC++ T++KYMTDG LLR
Sbjct: 62 RNGRIGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLR 121
Query: 433 EIVLEPSLESYSVLI 447
EI+ +PSL YS++I
Sbjct: 122 EILADPSLTQYSIVI 136
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 430 (156.4 bits), Expect = 6.2e-67, Sum P(2) = 6.2e-67
Identities = 95/194 (48%), Positives = 127/194 (65%)
Query: 448 DLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIV 507
+L+ R DLKL+++SAT++A F+ +FG AP F IP R + VE+F+ + DY+E A+
Sbjct: 504 NLLAKRKDLKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVK 563
Query: 508 TALQIHV--------NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYG 559
L IH+ N GDILVF+TGQ+ E +++K++ L L I PIY
Sbjct: 564 QVLTIHLGRWNADNNNANDGDILVFMTGQEDIEITCDLIKEKLNLLEDP-PPLDIFPIYS 622
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
+P +LQ KIF T RKVV+ATNIAETSLT+DGIKYVID G KVK YNPK GM++L
Sbjct: 623 TMPQDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTL 682
Query: 620 LVNPISKASANQRT 633
V PIS A+A+QR+
Sbjct: 683 QVVPISLANADQRS 696
Score = 310 (114.2 bits), Expect = 6.2e-67, Sum P(2) = 6.2e-67
Identities = 68/153 (44%), Positives = 96/153 (62%)
Query: 305 ESVELPDKSA-VKSALEM-LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQI 362
E ++ +K+A V +Q++RK+LP + R +LL + + V +++GETGSGKTTQ+
Sbjct: 332 EEIKQEEKNADVNETKHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQL 391
Query: 363 PQYLYEAGY----TKQGK---IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDC 415
Q+LYE G+ K G+ I CTQ +EM KLG EVGYSIRFED
Sbjct: 392 TQFLYEDGFGANIDKNGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDK 451
Query: 416 TSDK-TVLKYMTDGMLLREIVLEPSLESYSVLI 447
T +K TV+KYMT+G+LLREI+ +P L +YS +I
Sbjct: 452 TDNKKTVIKYMTEGILLREILADPMLANYSCII 484
Score = 38 (18.4 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 516 EPIGDILVFLTGQDQFETAEEIL 538
EP L+ L+ Q +F +EE++
Sbjct: 795 EPTLAKLILLSTQPEFHCSEEVV 817
Score = 37 (18.1 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 16/88 (18%), Positives = 34/88 (38%)
Query: 219 IKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYG 278
+++R +E + ++ G E + I+D + E KQ+ K AD+
Sbjct: 297 VQNRRSKRERALQAKEAAGVENSNIG---SIIDTAN-------TTEEIKQEEKNADVNET 346
Query: 279 SKNKKQQYDDYQYVFEIEDKIVDFFRES 306
QQ F + + ++ R++
Sbjct: 347 KHQDIQQQRKSLPAFAVRNDLLTTIRDN 374
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 423 (154.0 bits), Expect = 7.9e-67, Sum P(2) = 7.9e-67
Identities = 90/192 (46%), Positives = 128/192 (66%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+L+++SATLDAE F D+F S P I + R + V++FY ++P DYI
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQSPVPDYI 258
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-TKIAE-LIICPIYGN 560
++ + T ++IH E GDIL FLTGQ++ ET +L ++ R LG T + L + P+Y
Sbjct: 259 KSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAG 318
Query: 561 LPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLL 620
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNP+T +E L+
Sbjct: 319 LPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLV 378
Query: 621 VNPISKASANQR 632
V P+S+ASANQR
Sbjct: 379 VVPVSQASANQR 390
Score = 311 (114.5 bits), Expect = 7.9e-67, Sum P(2) = 7.9e-67
Identities = 59/130 (45%), Positives = 87/130 (66%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
++++R+ LP++ R +L + Y +VIVGETG GK+TQIPQYL EAG+T +G++ G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDGMLLREIVLEPS 439
Q +E G LGHEVGY IRF+DCT T +K++TDGML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 440 LESYS-VLID 448
L YS +++D
Sbjct: 167 LTKYSAIMLD 176
Score = 37 (18.1 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 542 TRGLGTKIAELIICPIYGNLPTE 564
T LG +IAE + P++ + E
Sbjct: 476 TEPLGMRIAEFPLNPMFAKMLLE 498
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 417 (151.9 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 90/201 (44%), Positives = 130/201 (64%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYF-----GSAP-----IFKIPRRRYHVELFYT 494
+L ++ R DL+L+++SATLDA+ F D+F G A I + R + V++FYT
Sbjct: 181 LLKKILKKRRDLRLIVASATLDAKKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYT 240
Query: 495 KAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGL---GTKIAE 551
+P DY++A + T L+IH E GD+L FLTGQ++ E +L+++ R L G K
Sbjct: 241 VSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMK-KH 299
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + P+Y LP Q ++FE RKVV+ATNIAETS+TI+G+ +VID F K+++YN
Sbjct: 300 LCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYN 359
Query: 612 PKTGMESLLVNPISKASANQR 632
P+T +ESL+V PISKASA QR
Sbjct: 360 PRTAIESLIVTPISKASACQR 380
Score = 317 (116.6 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 62/128 (48%), Positives = 87/128 (67%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGCT 380
++++R+ LP++ R +L V + +VIVGETGSGK+TQIPQYL EAG+ +GK IG T
Sbjct: 37 IEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVT 96
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDK-TVLKYMTDGMLLREIVLEPS 439
Q +E G LGHEVGY+IRF+DC+ T +K++TDGML+RE++ +P
Sbjct: 97 QPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPL 156
Query: 440 LESYSVLI 447
L+ YSVLI
Sbjct: 157 LKKYSVLI 164
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 419 (152.6 bits), Expect = 2.1e-66, Sum P(2) = 2.1e-66
Identities = 91/193 (47%), Positives = 127/193 (65%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+L+++SATLDAE F D+F S P I + R + V++FY ++P DYI
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYI 258
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGL---GTKIAELIICPIYG 559
+A + T ++IH E GDIL FLTGQ++ ET +L ++ R L G K L + P+Y
Sbjct: 259 KATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMK-KHLRVLPMYA 317
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNP+T +E L
Sbjct: 318 GLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECL 377
Query: 620 LVNPISKASANQR 632
+V P+S+ASANQR
Sbjct: 378 VVVPVSQASANQR 390
Score = 311 (114.5 bits), Expect = 2.1e-66, Sum P(2) = 2.1e-66
Identities = 59/128 (46%), Positives = 85/128 (66%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
++++R+ LP++ R +L V Y +VIVGETG GK+TQ+PQYL EAG+T +G++ G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDGMLLREIVLEPS 439
Q E G LGHEVGY IRF+DCT T +K++TDGML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 440 LESYSVLI 447
L YSV++
Sbjct: 167 LTKYSVVM 174
Score = 37 (18.1 bits), Expect = 6.1e-24, Sum P(2) = 6.1e-24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 542 TRGLGTKIAELIICPIYGNLPTE 564
T LG +IAE + P++ + E
Sbjct: 476 TEPLGMRIAEFPLNPMFAKMLLE 498
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 419 (152.6 bits), Expect = 3.0e-66, Sum P(2) = 3.0e-66
Identities = 91/193 (47%), Positives = 127/193 (65%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+L+++SATLDAE F D+F S P I + R + V++FY ++P DYI
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYI 258
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGL---GTKIAELIICPIYG 559
+A + T ++IH E GDIL FLTGQ++ ET +L ++ R L G K L + P+Y
Sbjct: 259 KATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMK-KHLRVLPMYA 317
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNP+T +E L
Sbjct: 318 GLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECL 377
Query: 620 LVNPISKASANQR 632
+V P+S+ASANQR
Sbjct: 378 VVVPVSQASANQR 390
Score = 311 (114.5 bits), Expect = 3.0e-66, Sum P(2) = 3.0e-66
Identities = 59/128 (46%), Positives = 85/128 (66%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
++++R+ LP++ R +L V Y +VIVGETG GK+TQ+PQYL EAG+T +G++ G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDGMLLREIVLEPS 439
Q E G LGHEVGY IRF+DCT T +K++TDGML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 440 LESYSVLI 447
L YSV++
Sbjct: 167 LTKYSVVM 174
Score = 37 (18.1 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 542 TRGLGTKIAELIICPIYGNLPTE 564
T LG +IAE + P++ + E
Sbjct: 476 TEPLGMRIAEFPLNPMFAKMLLE 498
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 414 (150.8 bits), Expect = 4.4e-66, Sum P(2) = 4.4e-66
Identities = 88/193 (45%), Positives = 127/193 (65%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+L+++SATLDA+ F D+F S P I + R + V++FY ++P DYI
Sbjct: 199 RGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYI 258
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGL---GTKIAELIICPIYG 559
++ + T ++IH E GD+L FLTGQ++ ET +L ++ R L G K L + P+Y
Sbjct: 259 KSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYA 317
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNP+T +E L
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 620 LVNPISKASANQR 632
+V P+S+ASANQR
Sbjct: 378 VVVPVSQASANQR 390
Score = 315 (115.9 bits), Expect = 4.4e-66, Sum P(2) = 4.4e-66
Identities = 59/128 (46%), Positives = 86/128 (67%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
++++R+ LP++ R +L + Y +VIVGETG GK+TQIPQYL EAG+T +G++ G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDGMLLREIVLEPS 439
Q +E G LGHEVGY IRF+DCT T +K++TDGML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 440 LESYSVLI 447
L YSV++
Sbjct: 167 LTKYSVIM 174
Score = 37 (18.1 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 542 TRGLGTKIAELIICPIYGNLPTE 564
T LG +IAE + P++ + E
Sbjct: 476 TEPLGMRIAEFPLNPMFAKMLLE 498
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 414 (150.8 bits), Expect = 6.4e-66, Sum P(2) = 6.4e-66
Identities = 88/193 (45%), Positives = 127/193 (65%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+L+++SATLDA+ F D+F S P I + R + V++FY ++P DYI
Sbjct: 199 RGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYI 258
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGL---GTKIAELIICPIYG 559
++ + T ++IH E GD+L FLTGQ++ ET +L ++ R L G K L + P+Y
Sbjct: 259 KSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYA 317
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNP+T +E L
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 620 LVNPISKASANQR 632
+V P+S+ASANQR
Sbjct: 378 VVVPVSQASANQR 390
Score = 315 (115.9 bits), Expect = 6.4e-66, Sum P(2) = 6.4e-66
Identities = 59/128 (46%), Positives = 86/128 (67%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
++++R+ LP++ R +L + Y +VIVGETG GK+TQIPQYL EAG+T +G++ G T
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTVLKYMTDGMLLREIVLEPS 439
Q +E G LGHEVGY IRF+DCT T +K++TDGML+RE++++P
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 440 LESYSVLI 447
L YSV++
Sbjct: 167 LTKYSVIM 174
Score = 37 (18.1 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 542 TRGLGTKIAELIICPIYGNLPTE 564
T LG +IAE + P++ + E
Sbjct: 476 TEPLGMRIAEFPLNPMFAKMLLE 498
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 431 (156.8 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 81/179 (45%), Positives = 118/179 (65%)
Query: 456 LKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN 515
LK+L+ SAT+D + FS YF AP+ + R++ +++FYTK P+ DY+ AA+V+ QIH
Sbjct: 232 LKVLVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQE 291
Query: 516 EPIG-DILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTP 574
P DILVFLTGQ++ E + + + L +++ P+Y +LP Q ++F+ P
Sbjct: 292 APSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAP 351
Query: 575 EGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
+G RKV+++TNIAETS+TI GIKYV+D G K K YNP +G+E L V +SK A QRT
Sbjct: 352 KGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRT 410
Score = 283 (104.7 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 57/128 (44%), Positives = 78/128 (60%)
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGC 379
E ++++R+ LPI+ R +LL + V++GETGSGKTTQIPQYLYE G +Q I
Sbjct: 72 EAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAV 131
Query: 380 TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPS 439
TQ E +LG VGY++RF+D TSD T +K++TDGMLLRE + +
Sbjct: 132 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCL 191
Query: 440 LESYSVLI 447
L YS +I
Sbjct: 192 LRKYSCII 199
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 420 (152.9 bits), Expect = 4.4e-65, Sum P(2) = 4.4e-65
Identities = 89/196 (45%), Positives = 124/196 (63%)
Query: 453 RPDLKLLISSATLDAENFSDYFGSA----------P------IFKIPRRRYHVELFYTKA 496
RP+L+++ISSATL AE F +F S P I + R Y +++ Y ++
Sbjct: 165 RPELRIIISSATLQAEQFLAFFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLES 224
Query: 497 PEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICP 556
P DY++ A+ T L +H NEP GDILVFLTG+D+ E A + + +RT L ++ L+ P
Sbjct: 225 PAEDYLQRAVSTVLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLP 284
Query: 557 IYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGM 616
++ L TE Q IFE P RKV+ +TNIAE S+TI GI YV+D GF K+++YNPKTG+
Sbjct: 285 LFSGLSTEQQMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGI 344
Query: 617 ESLLVNPISKASANQR 632
E+L PISKA+A QR
Sbjct: 345 ETLTAVPISKAAAAQR 360
Score = 296 (109.3 bits), Expect = 4.4e-65, Sum P(2) = 4.4e-65
Identities = 62/134 (46%), Positives = 85/134 (63%)
Query: 317 SALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK 376
S + L + LPI ++ LL V PV V+VG+TGSGKTTQIPQ+L +AG+ GK
Sbjct: 9 SFIPALHKPSSLLPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGK 68
Query: 377 -IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
IG TQ +E G ++G EVGYSIRFED TS+ T +K++TDG+L+RE +
Sbjct: 69 LIGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREAL 128
Query: 436 LEPSLESYS-VLID 448
++P L YS V++D
Sbjct: 129 VDPLLSRYSIVMVD 142
Score = 40 (19.1 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 542 TRGLGTKIAELIICPIYGNLPTELQAKIF 570
T+ LG ++AEL + P+ T L A+ F
Sbjct: 446 TKPLGLRMAELAVDPMMAK--TLLSAESF 472
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 122/190 (64%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SAT+D FS +F AP+F+IP RR+ V++FYTKAPEADY+
Sbjct: 52 FGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGRRFPVDIFYTKAPEADYL 111
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 112 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 171
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNP+TGMESL V
Sbjct: 172 SDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVT 231
Query: 623 PISKASANQR 632
P SKASANQR
Sbjct: 232 PCSKASANQR 241
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 122/190 (64%), Positives = 158/190 (83%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SAT+D FS +F AP+F+IP RR+ V++FYTKAPEADY+
Sbjct: 52 FGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYL 111
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 112 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 171
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNP+TGMESL V
Sbjct: 172 SDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVT 231
Query: 623 PISKASANQR 632
P SKASANQR
Sbjct: 232 PCSKASANQR 241
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 497 (180.0 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 90/191 (47%), Positives = 139/191 (72%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L +++ R DLKL+++SAT+DAE F+ +FG+ PIF IP R + V++ ++K P+ DY+
Sbjct: 75 FGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYV 134
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EAA+ +LQ+H++ GDIL+F+ GQ+ E + + + L A L + PIY LP
Sbjct: 135 EAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPA-LAVLPIYSQLP 193
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
++LQAKIF+ P+G RK ++ATNIAETSLT+DGI +VID G+ K+K +NP+ GM++L +
Sbjct: 194 SDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIY 253
Query: 623 PISKASANQRT 633
PIS+A+ANQR+
Sbjct: 254 PISQANANQRS 264
Score = 178 (67.7 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 396 QEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EMG LG EVGY+IRFEDCTS+ T++KYMTDG+LLRE + E L+ YS +I
Sbjct: 9 EEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAII 60
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 408 (148.7 bits), Expect = 8.7e-64, Sum P(2) = 8.7e-64
Identities = 86/203 (42%), Positives = 128/203 (63%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGS-----AP----------IFKIPRRRYHV 489
+L ++ RP+L++++SSATL AE+F YF P I I R Y V
Sbjct: 158 ILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQGPNGEVGGNTGKIISIEGRMYPV 217
Query: 490 ELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKI 549
+ + ++ +Y+E ++ T IH+ E GDIL+FLTG+++ ETA +++ +R L K
Sbjct: 218 DTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLTGREEIETAIQLISERATTLHPKS 277
Query: 550 AELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKS 609
L+ P+Y L T+ Q +FEP PE RKVV++TNIAE S+TI+GI YV+D GFAK+++
Sbjct: 278 QSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRA 337
Query: 610 YNPKTGMESLLVNPISKASANQR 632
Y+P TG+E+L PISKA+A QR
Sbjct: 338 YDPSTGIETLTAVPISKAAAVQR 360
Score = 301 (111.0 bits), Expect = 8.7e-64, Sum P(2) = 8.7e-64
Identities = 62/132 (46%), Positives = 84/132 (63%)
Query: 317 SALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK 376
S + L + LPI ++ +L V YPV ++VG+TGSGKTTQ+PQYL +AG+ +GK
Sbjct: 10 SFIPSLYKPASLLPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGK 69
Query: 377 -IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
I TQ +EM KLG +VGYSIRFED TS T +K++TDGMLLRE +
Sbjct: 70 AIAVTQPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREAL 129
Query: 436 LEPSLESYSVLI 447
++P L YSV++
Sbjct: 130 VDPLLSRYSVIM 141
Score = 38 (18.4 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 542 TRGLGTKIAELIICPIYGNLPTELQA 567
T+ LG ++AEL + P+ + Q+
Sbjct: 446 TKPLGMRMAELAVDPMMAKVLLSAQS 471
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 382 (139.5 bits), Expect = 3.5e-62, Sum P(2) = 3.5e-62
Identities = 81/193 (41%), Positives = 122/193 (63%)
Query: 453 RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEAAI 506
+ ++K+++ SATL+ + S++FG + IP R Y V E+F D Y+ A+
Sbjct: 150 KTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEAV 209
Query: 507 VTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTK-------IAELIICPIYG 559
L IH+NEP GDILVFLTGQ + E A ++L ++ + + I L+I P+YG
Sbjct: 210 KVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYG 269
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
++ T+ Q +IF P P+G RK V++TNIA TSLTI+G++YV+D GF K ++NP+ G++ L
Sbjct: 270 SMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDIL 329
Query: 620 LVNPISKASANQR 632
V PISK+ A QR
Sbjct: 330 EVVPISKSEAMQR 342
Score = 322 (118.4 bits), Expect = 3.5e-62, Sum P(2) = 3.5e-62
Identities = 61/119 (51%), Positives = 80/119 (67%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LPI R L++AVSE P L++ GETGSGK+TQ+P+YLYEAG + G IG TQ
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EMG LG VGY +RF+DC+S++T +KYMTDG LLR I+ +P L YS++I
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIII 119
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 396 (144.5 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
Identities = 89/194 (45%), Positives = 124/194 (63%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYF---GSAPI---FKIPRRRYHVELFYTKAPE 498
+L ++ R LKL+ISSAT+DA FS++F GS + I R + V FY P
Sbjct: 182 LLKKILRKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPC 241
Query: 499 ADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIY 558
ADY++ + T ++H EP GDIL FLTGQ++ A ++L++ ++ L + P+Y
Sbjct: 242 ADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIAS--SEQENLKVLPMY 299
Query: 559 GNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMES 618
G++ + Q +F P+G RKVVLATNIAETS+TI GI YVID G+ KVK YNPKT +S
Sbjct: 300 GSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDS 359
Query: 619 LLVNPISKASANQR 632
L++ P+SKASA QR
Sbjct: 360 LVIVPVSKASAIQR 373
Score = 283 (104.7 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
Identities = 54/126 (42%), Positives = 82/126 (65%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQ 381
L E+R+ LPI +R+++L + ++ V+++VGETGSGK+TQ+PQYLYE G+ +G IG T+
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITE 99
Query: 382 LXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLE 441
QE G +G VGY +RF + S T +K+MT+G+LLRE++ +P L
Sbjct: 100 PRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLT 159
Query: 442 SYSVLI 447
Y V+I
Sbjct: 160 QYGVII 165
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 588 (212.0 bits), Expect = 4.5e-60, Sum P(2) = 4.5e-60
Identities = 125/221 (56%), Positives = 158/221 (71%)
Query: 418 DKTVLKY---MTDGMLLREIVLEPSLESYSVLIDLI--NYRPDLKLLISSATLDAENFSD 472
D T+ KY M D R + E L S+L D++ + DLK++I+SAT++AE FS
Sbjct: 339 DPTLGKYSAIMIDEAHERTLSTEILL---SLLKDVMMTTRKDDLKIIIASATINAEKFSQ 395
Query: 473 YFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPI-GDILVFLTGQDQF 531
+F +API IP RR+ V++ YTK PEA+YI+AAI T QIH+ +P+ GDILVFLTGQD+
Sbjct: 396 FFNNAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEI 455
Query: 532 ETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSL 591
ET EEIL+ LG +I +I+C IY NLP ELQ KIF+PTP RK+VLATNIAETS+
Sbjct: 456 ETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSI 515
Query: 592 TIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
TIDGI YVIDPG+ K YNP TGMESL+V P S+ASA+QR
Sbjct: 516 TIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQR 556
Score = 358 (131.1 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 88/226 (38%), Positives = 136/226 (60%)
Query: 255 QEGLQRCSHESDKQQRKKAD-LKYGSKNKKQQYDD--YQYVFEIEDKIVDFFRESVELP- 310
Q+ Q + +Q K+AD L + +K DD Y++VF+ + + V++ + ELP
Sbjct: 142 QQSFQPPRMNWEDEQFKRADQLILQNDDKIHINDDKEYEFVFD-QTQFVNY-DDIEELPG 199
Query: 311 -------DKSAVKSALEML----QEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKT 359
++S ++ + ++ E RK+LP+Y +REE L+ ++E L++VGETGSGKT
Sbjct: 200 NGEEEEEEESGIRDSDSIIGNKYDEVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKT 259
Query: 360 TQIPQYLYEAGYTKQGK-IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFED-CTS 417
TQ+PQYL+EAGY++ + I CTQ EM VKLG +VGY+IRF+D C
Sbjct: 260 TQLPQYLHEAGYSRNNQVIACTQPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKD 319
Query: 418 DKTVLKYMTDGMLLREIVLEPSLESYS-VLIDLINYRP-DLKLLIS 461
TV+KY+TDGMLLRE + +P+L YS ++ID + R ++L+S
Sbjct: 320 GVTVIKYVTDGMLLREFLQDPTLGKYSAIMIDEAHERTLSTEILLS 365
Score = 51 (23.0 bits), Expect = 4.5e-60, Sum P(2) = 4.5e-60
Identities = 29/121 (23%), Positives = 54/121 (44%)
Query: 197 ENLREVSRQKYLPKRAQKKLEEIKDR----TKDKENLFEGQKLTGAELCELDYEKKILDL 252
+ L E+ Q+ L R Q +LE + ++ ++ N + L L K +
Sbjct: 80 QELEELEIQEDLSPRQQSRLEYLTNKLNNWNRNNNNNNNASQNEYYNLPSLQQSKNDVLH 139
Query: 253 VGQEGLQRCSHESDKQQRKKAD-LKYGSKNKKQQYDD--YQYVFEIEDKIVDFFRESVEL 309
Q+ Q + +Q K+AD L + +K DD Y++VF+ + + V++ + EL
Sbjct: 140 QKQQSFQPPRMNWEDEQFKRADQLILQNDDKIHINDDKEYEFVFD-QTQFVNY-DDIEEL 197
Query: 310 P 310
P
Sbjct: 198 P 198
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 377 (137.8 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 86/196 (43%), Positives = 120/196 (61%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-------TKIAELIICPI 557
+ + IH+NE GDILVFLTGQ + E + E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 618 SLLVNPISKASANQRT 633
L V PISK+ A QR+
Sbjct: 379 ILEVVPISKSEALQRS 394
Score = 305 (112.4 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXX 387
T PI R++L+QAV + L++ G TGSGKTTQ+P+YLYEAG+++ G IG TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 388 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EM LG +VGY +RF+DC+S +T +KYMTDG LL+ I+ +P+L +SV+I
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Score = 39 (18.8 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 547 TKIAELIICPIYGNLPTELQAKIFE 571
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 377 (137.8 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 86/196 (43%), Positives = 120/196 (61%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-------TKIAELIICPI 557
+ + IH+NE GDILVFLTGQ + E + E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 618 SLLVNPISKASANQRT 633
L V PISK+ A QR+
Sbjct: 379 ILEVVPISKSEALQRS 394
Score = 305 (112.4 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXX 387
T PI R++L+QAV + L++ G TGSGKTTQ+P+YLYEAG+++ G IG TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 388 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EM LG +VGY +RF+DC+S +T +KYMTDG LL+ I+ +P+L +SV+I
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Score = 39 (18.8 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 547 TKIAELIICPIYGNLPTELQAKIFE 571
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 422 (153.6 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 79/178 (44%), Positives = 116/178 (65%)
Query: 456 LKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN 515
LK+++ SAT+D + FS YF A + + R++ +++FYTK P+ DY+ AA+V+ QIH
Sbjct: 134 LKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALVSVFQIHQE 193
Query: 516 EPIG-DILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTP 574
P DILVFLTGQ++ E + + + L +++ P+Y +LP Q ++F+ P
Sbjct: 194 APSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQGAP 253
Query: 575 EGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+G RKV++ATNIAETS+TI GIKYV+D G K K YNP +G+E L V +SK A QR
Sbjct: 254 KGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 311
Score = 233 (87.1 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 46/96 (47%), Positives = 60/96 (62%)
Query: 352 GETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIR 411
GETGSGKTTQ+PQYLYE G +QG I TQ E +LG VGY++R
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVR 65
Query: 412 FEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
F+D +S+ T +K++TDGMLLRE + + L YS +I
Sbjct: 66 FDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCII 101
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 377 (137.8 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 86/196 (43%), Positives = 120/196 (61%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-------TKIAELIICPI 557
+ + IH+NE GDILVFLTGQ + E + E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 618 SLLVNPISKASANQRT 633
L V PISK+ A QR+
Sbjct: 379 ILEVVPISKSEALQRS 394
Score = 304 (112.1 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXX 387
T PI R++L+QAV + L++ G TGSGKTTQ+P+YLYEAG+++ G IG TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 388 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EM LG +VGY +RF+DC+S +T +KYMTDG LL+ I+ +P+L +SV+I
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Score = 39 (18.8 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 547 TKIAELIICPIYGNLPTELQAKIFE 571
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 377 (137.8 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 86/196 (43%), Positives = 120/196 (61%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-------TKIAELIICPI 557
+ + IH+NE GDILVFLTGQ + E + E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 618 SLLVNPISKASANQRT 633
L V PISK+ A QR+
Sbjct: 379 ILEVVPISKSEALQRS 394
Score = 304 (112.1 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXX 387
T PI R++L+QAV + L++ G TGSGKTTQ+P+YLYEAG+++ G IG TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 388 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EM LG +VGY +RF+DC+S +T +KYMTDG LL+ I+ +P+L +SV+I
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Score = 39 (18.8 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 547 TKIAELIICPIYGNLPTELQAKIFE 571
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 377 (137.8 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 86/196 (43%), Positives = 120/196 (61%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-------TKIAELIICPI 557
+ + IH+NE GDILVFLTGQ + E + E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 618 SLLVNPISKASANQRT 633
L V PISK+ A QR+
Sbjct: 379 ILEVVPISKSEALQRS 394
Score = 304 (112.1 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXX 387
T PI R++L+QAV + L++ G TGSGKTTQ+P+YLYEAG+++ G IG TQ
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 388 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EM LG +VGY +RF+DC+S +T +KYMTDG LL+ I+ +P+L +SV+I
Sbjct: 112 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Score = 39 (18.8 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 547 TKIAELIICPIYGNLPTELQAKIFE 571
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 377 (137.8 bits), Expect = 2.7e-59, Sum P(2) = 2.7e-59
Identities = 86/196 (43%), Positives = 120/196 (61%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 199 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 258
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-------TKIAELIICPI 557
+ + IH+NE GDILVFLTGQ + E + E+L Q + T + L+I P
Sbjct: 259 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 318
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NP+ G++
Sbjct: 319 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 378
Query: 618 SLLVNPISKASANQRT 633
L V PISK+ A QR+
Sbjct: 379 ILEVVPISKSEALQRS 394
Score = 302 (111.4 bits), Expect = 2.7e-59, Sum P(2) = 2.7e-59
Identities = 56/120 (46%), Positives = 81/120 (67%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXX 387
T PI R++++QAV + L++ G TGSGKTTQ+P+YLYEAG+++ G IG TQ
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 388 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EM LG +VGY +RF+DC+S +T +KYMTDG LL+ I+ +P+L +SV+I
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Score = 39 (18.8 bits), Expect = 7.7e-23, Sum P(2) = 7.7e-23
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 547 TKIAELIICPIYGNLPTELQAKIFE 571
TK+ I+CPI +L K+ E
Sbjct: 677 TKVYARIVCPIRYEWVRDLLPKLHE 701
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 377 (137.8 bits), Expect = 2.8e-59, Sum P(2) = 2.8e-59
Identities = 86/196 (43%), Positives = 120/196 (61%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 277 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 336
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-------TKIAELIICPI 557
+ + IH+NE GDILVFLTGQ + E + E+L Q + T + L+I P
Sbjct: 337 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 396
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NP+ G++
Sbjct: 397 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 456
Query: 618 SLLVNPISKASANQRT 633
L V PISK+ A QR+
Sbjct: 457 ILEVVPISKSEALQRS 472
Score = 304 (112.1 bits), Expect = 2.8e-59, Sum P(2) = 2.8e-59
Identities = 57/120 (47%), Positives = 81/120 (67%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXX 387
T PI R++L+QAV + L++ G TGSGKTTQ+P+YLYEAG+++ G IG TQ
Sbjct: 130 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 189
Query: 388 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EM LG +VGY +RF+DC+S +T +KYMTDG LL+ I+ +P+L +SV+I
Sbjct: 190 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 249
Score = 39 (18.8 bits), Expect = 6.6e-23, Sum P(2) = 6.6e-23
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 547 TKIAELIICPIYGNLPTELQAKIFE 571
TK+ I+CPI +L K+ E
Sbjct: 755 TKVYARIVCPIRYEWVRDLLPKLHE 779
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 378 (138.1 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 88/198 (44%), Positives = 121/198 (61%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYF-----GS-----APIFKIPRRRYHVELFYT 494
+L +I R DL++++SSATLDAE F D+F G+ A I + R + V + +T
Sbjct: 213 LLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHT 272
Query: 495 KAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELII 554
K DY ++A+ T + IH +E GDILVFLTGQD+ E E L++ L L +
Sbjct: 273 KTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNL-KNCDRLWV 331
Query: 555 CPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKT 614
P YG LP Q K F+ TP G RKVV+ATNIAE S+TI GI YVID G+ K+++ +
Sbjct: 332 VPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAAN 391
Query: 615 GMESLLVNPISKASANQR 632
G+E+L+ +SKASA QR
Sbjct: 392 GVETLMRVTVSKASAEQR 409
Score = 273 (101.2 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 53/127 (41%), Positives = 79/127 (62%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGCT 380
+Q++R LPI+ R +L Y ++IVGETG GK+TQ+PQ+L EAG+ G+ I T
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q +E LGH+VGY++RF+D + T +K+MTDG+LLREI+ +P L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 441 ESYSVLI 447
YS+++
Sbjct: 190 SKYSIIM 196
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 573 (206.8 bits), Expect = 4.2e-55, P = 4.2e-55
Identities = 161/437 (36%), Positives = 236/437 (54%)
Query: 215 KLEEIKDRTK-DKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQ---QR 270
K++ K+ K +++ ++E Q+L A + D+ I L G + ++D
Sbjct: 128 KIKNAKEIDKINRQRMWEEQQLRNAMAGQSDHPDDIT-LEGSDKYDYV-FDTDAMIDYTN 185
Query: 271 KKADLKYGSKNKKQQYDD-YQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTL 329
++ DL +K QY+ E E+K + +E+ +L K E+LQE +K
Sbjct: 186 EEDDLL---PEEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKD--ELLQEIKKNQ 240
Query: 330 PIYPFREELLQAVSEYP-VLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
+ E ++ P LV G T GK QI T+ ++ T +
Sbjct: 241 VLIIMGETGSGKTTQLPQYLVEDGFTDQGKL-QI-------AITQPRRVAATSVAARVAD 292
Query: 389 XXXXXXXQEMGVKLGHE---VGYSIRFEDCTSDKTVLKYMTDGMLLRE--IVLEPSLE-- 441
+E+G ++ E + T + +++TD L + I+++ + E
Sbjct: 293 EMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERT 352
Query: 442 -SYSVLI----DLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKA 496
+ +LI D++ RP LKLLISSAT++A+ FS++F + PIF +P RRY V++ YT
Sbjct: 353 LATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQ 412
Query: 497 PEADYIEAAIVTALQIHVNEPI-GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIIC 555
PEA+YI AAI T QIH + + GDILVFLTGQ++ E + L++ LG++ ++II
Sbjct: 413 PEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIIT 472
Query: 556 PIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTG 615
PIY NLP E Q KIF+PTPE RKVVLATNIAETSLTIDGI+YVIDPGF K SY P TG
Sbjct: 473 PIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTG 532
Query: 616 MESLLVNPISKASANQR 632
M LL P S+AS +QR
Sbjct: 533 MTQLLTVPCSRASVDQR 549
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 383 (139.9 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 71/132 (53%), Positives = 98/132 (74%)
Query: 316 KSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG 375
K+ L ++ E+R++LPI+ +E+L+QAV + +L+++GETGSGKTTQI QYL EAGYT +G
Sbjct: 463 KTQLSII-EQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRG 521
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
KIGCTQ +E G LG EVGY+IRFEDCTS +TV+KYMTDGMLLRE +
Sbjct: 522 KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECL 581
Query: 436 LEPSLESYSVLI 447
++P L Y++++
Sbjct: 582 IDPDLTQYAIIM 593
Score = 231 (86.4 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 42/85 (49%), Positives = 60/85 (70%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ +L + R D+KL+++SATLDA FS YF APIF IP R Y VE+ YTK PE DY+
Sbjct: 608 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 667
Query: 503 EAAIVTALQIHVNEPIGDILVFLTG 527
+A+++T +QIH+ EP G+ +V + G
Sbjct: 668 DASLITVMQIHLTEPPGEWIVMIHG 692
Score = 50 (22.7 bits), Expect = 2.1e-54, Sum P(3) = 2.1e-54
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R R + +R+ R R + +R T + K Y + RSR + R+ R KYL
Sbjct: 99 RRSRSRSR-DRKRRHRSRSRSRSRTRDRNRGKSRYYSRSRSRSPS--RDRRD--RDKYLE 153
Query: 210 KRAQKKLEEIKDRTKDKE 227
+ ++ ++ DR +E
Sbjct: 154 RSNERWRDKHVDRPPPEE 171
Score = 38 (18.4 bits), Expect = 3.8e-53, Sum P(3) = 3.8e-53
Identities = 19/85 (22%), Positives = 41/85 (48%)
Query: 209 PKRAQKKLEEI------KDRTKDKENLFEGQ-KLTGAELCELDYEKKILDLVGQEGLQRC 261
PK +++L+E+ D + L E K+ L EL+ ++ ++G Q+
Sbjct: 34 PKSEKERLKELFPALCRPDNPNVRNMLDEDDVKVAADALKELE---ALMPSADRQGKQK- 89
Query: 262 SHESDKQQRKKADLKYGSKNKKQQY 286
SD + +KK + S+++K+++
Sbjct: 90 --NSDHRAKKKRRSRSRSRDRKRRH 112
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 414 (150.8 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 88/193 (45%), Positives = 127/193 (65%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+L+++SATLDA+ F D+F S P I + R + V++FY ++P DYI
Sbjct: 168 RGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYI 227
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGL---GTKIAELIICPIYG 559
++ + T ++IH E GD+L FLTGQ++ ET +L ++ R L G K L + P+Y
Sbjct: 228 KSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYA 286
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
LP+ Q K+FE RKV++ATN+AETS+TI GI YVID GF K+++YNP+T +E L
Sbjct: 287 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 346
Query: 620 LVNPISKASANQR 632
+V P+S+ASANQR
Sbjct: 347 VVVPVSQASANQR 359
Score = 197 (74.4 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 39/86 (45%), Positives = 56/86 (65%)
Query: 364 QYLYEAGYTKQGKI-GCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTV 421
+YL EAG+T +G++ G TQ +E G LGHEVGY IRF+DCT T
Sbjct: 58 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 117
Query: 422 LKYMTDGMLLREIVLEPSLESYSVLI 447
+K++TDGML+RE++++P L YSV++
Sbjct: 118 IKFLTDGMLVREMMVDPLLTKYSVIM 143
Score = 37 (18.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 542 TRGLGTKIAELIICPIYGNLPTE 564
T LG +IAE + P++ + E
Sbjct: 445 TEPLGMRIAEFPLNPMFAKMLLE 467
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 123/282 (43%), Positives = 174/282 (61%)
Query: 370 GYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIR--FEDCTSDKTVLKYMTD 427
G T+ ++ + +E+G + E S R + T + + M D
Sbjct: 120 GCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMAD 179
Query: 428 GMLLRE--IVLEPSLES-------YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAP 478
+L R I+L+ + E + +L +++ RPDLKL++ SATL+AE F +YF AP
Sbjct: 180 PLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAP 239
Query: 479 IFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEIL 538
+ K+P R + VE+FYT+ PE DY+EAAI T +QIH+ EP GDILVFLTG+++ E A +
Sbjct: 240 LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKI 299
Query: 539 KQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTP----EGA---RKVVLATNIAETSL 591
+ LG ++ + + P+Y LP +Q KIF+P P EG RK+V++TNIAETSL
Sbjct: 300 NKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSL 359
Query: 592 TIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
TIDGI YVIDPGFAK K YNP+ +ESLLV+PISKASA+QR+
Sbjct: 360 TIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRS 401
Score = 307 (113.1 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 63/134 (47%), Positives = 89/134 (66%)
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEA---GYTKQGK 376
E+L E+R+ LP++ +++ L ++ L++VGETGSGKTTQIPQ++ +A + +G+
Sbjct: 57 EIL-EKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGR 115
Query: 377 ---IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE 433
+GCTQ EM V +G EVGYSIRFEDCTS +T+LKY+TDGMLLRE
Sbjct: 116 KWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLRE 175
Query: 434 IVLEPSLESYSVLI 447
+ +P LE Y V+I
Sbjct: 176 AMADPLLERYKVII 189
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 336 (123.3 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
Identities = 74/179 (41%), Positives = 108/179 (60%)
Query: 455 DLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHV 514
+LK++++SAT+D ++F +YF ++ + R Y V + +TK DYI +VT IH
Sbjct: 218 NLKVVVTSATMDIDHFGNYFNCKGMY-LEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHR 276
Query: 515 NEPIG-DILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPT 573
P D+L+FLTGQ++ E+ + ++Q + T +L + +Y L Q + F PT
Sbjct: 277 TTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPT 336
Query: 574 PEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
P RKV+LATNIAETS+TI GI+ VID GF K KS+N G++ L ISKA A QR
Sbjct: 337 PANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQR 395
Score = 272 (100.8 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
Identities = 53/126 (42%), Positives = 80/126 (63%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQ 381
+++++K+LP++ R +L+ + ++I+ ETGSGKTTQIPQ+L AGY K G IG TQ
Sbjct: 61 IEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQ 120
Query: 382 LXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLE 441
QE+ +G VGY++RFED TS T ++++TDG+LLRE + + L
Sbjct: 121 PRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLL 180
Query: 442 SYSVLI 447
YSV+I
Sbjct: 181 KYSVII 186
Score = 41 (19.5 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 194 DGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLF 230
DG+ LRE + + L K + L+E +RT + + LF
Sbjct: 166 DGVL-LRESIKDRLLLKYSVIILDEAHERTVNADLLF 201
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 315 (115.9 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 70/170 (41%), Positives = 104/170 (61%)
Query: 476 SAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFE--- 532
++ I I R Y V++ Y + ++YI+ I T + IH +P GDILVFLTGQ++ E
Sbjct: 244 TSTILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLI 303
Query: 533 -TAE---EILKQ----RTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGA--RKVVL 582
T + EIL+Q + + P+Y L Q K+FE + RK+++
Sbjct: 304 QTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIII 363
Query: 583 ATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+TNIAETS+TIDG+ YV+D GF K+KSY+ ++G+ESL++ P SK+SANQR
Sbjct: 364 STNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQR 413
Score = 283 (104.7 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 59/129 (45%), Positives = 88/129 (68%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGCT 380
+Q++R +LPIY R+ +L + +Y LVI+G TG GK+TQIPQYL+E+G++ + I CT
Sbjct: 48 IQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCT 107
Query: 381 QLXXXXXXXXXXXXXQEMGVK-LGHEVGYSIRFEDCTSD-KTVLKYMTDGMLLREIVLEP 438
Q QEMG + +G VGYS+RF++ SD +T +KY+TDGML+RE++L+P
Sbjct: 108 QPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDP 167
Query: 439 SLESYSVLI 447
L YSV++
Sbjct: 168 LLLKYSVIM 176
Score = 160 (61.4 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 456 LKLLISSATLDAENFSDYFG----------SAPIFKIPRRRYHVELFYTKAPEADYIEAA 505
LKL+ISSATL+A +F ++F ++ I I R Y V++ Y + ++YI+
Sbjct: 214 LKLIISSATLNANDFFNFFNYNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSNYIQTT 273
Query: 506 IVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQR 541
I T + IH +P GDILVFLTGQ++ E + L +
Sbjct: 274 IQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTLDDK 309
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 122/255 (47%), Positives = 163/255 (63%)
Query: 396 QEMGVKLGHE--VGYSIRFEDCTSDKTVLKYMTDGMLLRE--IVLEPSLE---SYSVLID 448
+E+G + E G + + T + + MTD ML R I+L+ + E + +L+
Sbjct: 152 EEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMG 211
Query: 449 LINY----RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
L+ RPDLK+++ SATLDA+ F YF AP+ +P R Y VE++YT+ PE DY+EA
Sbjct: 212 LMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEA 271
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAE--LIICPIYGNLP 562
A+ T LQIHV E GDILVFLTG+++ E A + L + A L + P+YG+LP
Sbjct: 272 ALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLP 331
Query: 563 TELQAKIFEPTPEGA-----RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
Q +IFEPTPE RKVV++TNIAETSLTIDGI YV+DPGF+K K YNP+ +E
Sbjct: 332 PNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVE 391
Query: 618 SLLVNPISKASANQR 632
SLLV+PISKASA QR
Sbjct: 392 SLLVSPISKASAQQR 406
Score = 303 (111.7 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 67/139 (48%), Positives = 85/139 (61%)
Query: 311 DKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQY-LY-E 368
DK ++ ++L E R+ LP+Y REE L+ E ++V VGETGSGKTTQIPQ+ LY E
Sbjct: 58 DKPFSQNYFKIL-ETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDE 116
Query: 369 AGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDG 428
+ +I CTQ EM V LG EVGY+IRFEDC+ T+LKYMTDG
Sbjct: 117 LPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDG 176
Query: 429 MLLREIVLEPSLESYSVLI 447
MLLRE + + L YS +I
Sbjct: 177 MLLREAMTDHMLSRYSCII 195
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 527 (190.6 bits), Expect = 1.8e-49, P = 1.8e-49
Identities = 127/328 (38%), Positives = 192/328 (58%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LP+ RE++ +A+S V++I GETGSGKTTQ+P+ E G +G IG TQ
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAAR 135
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESY-SVLI 447
+E+ LG VG+ +RF D ++ +K MTDG+LL E+ + L+ Y +++I
Sbjct: 136 SVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIII 195
Query: 448 D-----------LINY-------RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV 489
D ++ Y RPDLK++I+SAT+D E FS +F +API ++ R Y V
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 490 ELFY---TKAPEADYIEA-AIVTALQIHVNEPIGDILVFLTGQDQF-ETAEEILKQRTRG 544
E Y + EAD + I A+ V E +GDIL+F+ G+ + +TAE++ ++ R
Sbjct: 256 ETRYRPLVQDTEADLDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNYRD 315
Query: 545 LGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGF 604
T+I P+Y L Q+K+F + R++VLATN+AETSLT+ GI+YVIDPG
Sbjct: 316 --TEIL-----PLYARLSYGEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPGT 366
Query: 605 AKVKSYNPKTGMESLLVNPISKASANQR 632
A++ Y+ +T ++ L + PIS+ASANQR
Sbjct: 367 ARISRYSYRTKVQRLPIEPISQASANQR 394
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 527 (190.6 bits), Expect = 1.8e-49, P = 1.8e-49
Identities = 127/328 (38%), Positives = 192/328 (58%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LP+ RE++ +A+S V++I GETGSGKTTQ+P+ E G +G IG TQ
Sbjct: 76 LPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAAR 135
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESY-SVLI 447
+E+ LG VG+ +RF D ++ +K MTDG+LL E+ + L+ Y +++I
Sbjct: 136 SVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIII 195
Query: 448 D-----------LINY-------RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV 489
D ++ Y RPDLK++I+SAT+D E FS +F +API ++ R Y V
Sbjct: 196 DEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Query: 490 ELFY---TKAPEADYIEA-AIVTALQIHVNEPIGDILVFLTGQDQF-ETAEEILKQRTRG 544
E Y + EAD + I A+ V E +GDIL+F+ G+ + +TAE++ ++ R
Sbjct: 256 ETRYRPLVQDTEADLDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNYRD 315
Query: 545 LGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGF 604
T+I P+Y L Q+K+F + R++VLATN+AETSLT+ GI+YVIDPG
Sbjct: 316 --TEIL-----PLYARLSYGEQSKVF--SSHTGRRIVLATNVAETSLTVPGIRYVIDPGT 366
Query: 605 AKVKSYNPKTGMESLLVNPISKASANQR 632
A++ Y+ +T ++ L + PIS+ASANQR
Sbjct: 367 ARISRYSYRTKVQRLPIEPISQASANQR 394
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 526 (190.2 bits), Expect = 2.4e-49, P = 2.4e-49
Identities = 140/381 (36%), Positives = 213/381 (55%)
Query: 277 YGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFRE 336
+G K K D Q +F+ K +D V L + A + E+ + LP+ ++
Sbjct: 32 HGVKKVKNP-DAQQAIFQEMAKEIDQAAGKVLL--REAARP--EITYPDN--LPVSQKKQ 84
Query: 337 ELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQ 396
++L+A+ ++ V+++ GETGSGKTTQ+P+ E G +G IG TQ +
Sbjct: 85 DILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAE 144
Query: 397 EMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESY-SVLID------- 448
E+ + G +GY +RF D SD T++K MTDG+LL EI + L Y +++ID
Sbjct: 145 ELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSL 204
Query: 449 ----LINY-------RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTK-A 496
L+ Y RPDLK++I+SAT+D E FS +F +API ++ R Y VE+ Y
Sbjct: 205 NIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIV 264
Query: 497 PEADYIEA----AIVTALQIHVNEPIGDILVFLTGQDQF-ETAEEILKQRTRGLGTKIAE 551
EAD E AI A+ E GDIL+F++G+ + +TA+ + K L + E
Sbjct: 265 EEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK-----LNLRHTE 319
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
++ P+Y L Q ++F+ R++VLATN+AETSLT+ GIKYVIDPG A++ Y+
Sbjct: 320 IL--PLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYS 375
Query: 612 PKTGMESLLVNPISKASANQR 632
+T ++ L + PIS+ASANQR
Sbjct: 376 YRTKVQRLPIEPISQASANQR 396
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 326 (119.8 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 73/184 (39%), Positives = 104/184 (56%)
Query: 456 LKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAP------EADYIEAAIVTA 509
L+L+I SATL AE F YF +A + + R + +E+F+ DY+ A++
Sbjct: 311 LRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICV 370
Query: 510 LQIHVNEPIG-DILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAK 568
+H+ EP G DILVFLTG ++ E L + L L+ P+Y L E Q +
Sbjct: 371 KYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKE 430
Query: 569 IFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKAS 628
F TP+GARKV+++TNIAETS+TI GI+ VID G K K + ++ L V+ +SKA
Sbjct: 431 AFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQ 490
Query: 629 ANQR 632
A QR
Sbjct: 491 AKQR 494
Score = 251 (93.4 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 50/124 (40%), Positives = 72/124 (58%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXX 385
R LPI ++L+ ++ L+++GETGSGK+TQ+PQ AG G I TQ
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRV 217
Query: 386 XXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS- 444
EMG +G VGY +RFE+ T KT ++YMTDG++LR+ ++ P L+ YS
Sbjct: 218 AAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSC 277
Query: 445 VLID 448
V+ID
Sbjct: 278 VIID 281
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 487 (176.5 bits), Expect = 3.6e-46, P = 3.6e-46
Identities = 105/219 (47%), Positives = 150/219 (68%)
Query: 417 SDKTVLKYMTDGMLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATLDAENFSDY 473
SD T+ KY D ++L E E +L + + ++ D++ R DLKL++ SATL+A F Y
Sbjct: 185 SDPTLNKY--DVIILDE-AHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKY 241
Query: 474 FGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFET 533
F +AP+ K+P R + VE+FYT+ DY+E+A+ T + IH NE GDILVFLTG+++ E
Sbjct: 242 FENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIED 301
Query: 534 AEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTI 593
+++ TR G + + P+Y +LP Q+KIF+ E RK +++TNIAETSLTI
Sbjct: 302 TCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTI 357
Query: 594 DGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
DGI +V+DPGF+K K+YNP++ +ESLLV PISKASANQR
Sbjct: 358 DGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQR 396
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 272 (100.8 bits), Expect = 1.7e-45, Sum P(4) = 1.7e-45
Identities = 58/128 (45%), Positives = 81/128 (63%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQ-GKIGCT 380
+QE R LPI + +++A++E P++VI GETGSGKTTQ+PQ+LYEAGYT G IG T
Sbjct: 235 IQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGIT 294
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEV-GYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPS 439
+ +EM L H V Y IR+E T+D+T +K+MTDG+LL+E+ +
Sbjct: 295 EPRRVAAVSMSQRVAKEMN--LSHRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFL 352
Query: 440 LESYSVLI 447
L Y V+I
Sbjct: 353 LSKYKVII 360
Score = 212 (79.7 bits), Expect = 1.7e-45, Sum P(4) = 1.7e-45
Identities = 45/81 (55%), Positives = 55/81 (67%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + P+Y L E QAK+F P P G R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 612 PKTGMESLLVNPISKASANQR 632
TG+ S V IS+ASANQR
Sbjct: 637 KITGVSSFRVTWISQASANQR 657
Score = 120 (47.3 bits), Expect = 1.7e-45, Sum P(4) = 1.7e-45
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 456 LKLLISSATLDAENFSD----YFGSAPIFKIPRRRYHVEL-FYTKAPEADYIEAAIVTAL 510
LKL+I SATL E+F++ + G+ P+ ++ R++ V + F K P DY
Sbjct: 392 LKLIIMSATLRVEDFTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVC 451
Query: 511 QIHVNEPIGDILVFLTGQ 528
+IH P G ILVFLTGQ
Sbjct: 452 KIHRMLPSGGILVFLTGQ 469
Score = 49 (22.3 bits), Expect = 1.7e-45, Sum P(4) = 1.7e-45
Identities = 24/107 (22%), Positives = 46/107 (42%)
Query: 197 ENLREVSRQKYLPK-RAQ--KKLEEIKDRTKDKENLFEGQKL-TGAELCELDYEKKILDL 252
+NL++V QK K RA+ KL E++ + + L+ KL G + + K++L
Sbjct: 79 KNLQKVLEQKEKKKQRAELLSKLSEVQASQAEMKLLYTTSKLGIGGRMYQ---PKRVLQE 135
Query: 253 VGQ---------EGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQ 290
G G + H SD + + + + KK++ + +
Sbjct: 136 PGTAVPEKIRSISGANKRRHSSDSEPEPEGESSGSEEEKKEEKQEIE 182
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 337 (123.7 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 82/194 (42%), Positives = 122/194 (62%)
Query: 449 LINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY----TKAPEADYIEA 504
L+ R DLKL+I+SAT+D E FS +F +API ++P R Y VE+ Y + E+D E
Sbjct: 213 LLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYPVEIRYRPPDSAEEESDETER 272
Query: 505 ----AIVTAL-QIHVNEPIGDILVFLTGQDQF-ETAEEILKQRTRGLGTKIAELIICPIY 558
AI+ A+ ++H E GDIL+FL+G+ + +TAE + K A+ + P+Y
Sbjct: 273 GEQQAILDAVDELH-RENTGDILIFLSGEREIRDTAESLRKHHP-------ADCEVLPLY 324
Query: 559 GNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMES 618
L Q KIF+P G R++VLATN+AETSLT+ GI+ VID G+A++ Y+ ++ ++
Sbjct: 325 SRLTVSEQEKIFKP--HGRRRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQR 382
Query: 619 LLVNPISKASANQR 632
L + IS+ASANQR
Sbjct: 383 LPIEKISRASANQR 396
Score = 224 (83.9 bits), Expect = 1.9e-45, Sum P(2) = 1.9e-45
Identities = 53/135 (39%), Positives = 74/135 (54%)
Query: 313 SAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYT 372
SA +A+ L E + LP+ R E+ +A+ + V+++ GETGSGKTTQ+P+ EAG
Sbjct: 59 SARMAAVPPL-EYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRG 117
Query: 373 KQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLR 432
QG IG TQ E+ LG VGY +RF D T +++K MTDG+LL
Sbjct: 118 IQGYIGHTQPRRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLA 177
Query: 433 EIVLEPSLESYSVLI 447
E + L+ Y LI
Sbjct: 178 ETQTDRFLDQYDTLI 192
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 331 (121.6 bits), Expect = 3.2e-44, Sum P(3) = 3.2e-44
Identities = 77/189 (40%), Positives = 112/189 (59%)
Query: 263 HESDKQQRKKAD-LKYGSKNKKQQYDDYQYVFEIE-DKIVD--FFRESVELPDKSAVKSA 318
+++D ++ D + Y S ++ D+ VF+ + DKI F E+ K+ +K
Sbjct: 410 NKNDNTSKEDYDNISYNSSENNKEDDNGSDVFDYKKDKIYSSLFNIENNNKDKKNTLKDK 469
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
E+L+ +++LPIY + ELL AV +++IVGETGSGKTTQI QYLYE GY + G I
Sbjct: 470 EELLKL-KESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIIC 528
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEP 438
CTQ EM V +G VGY+IRFED T+ T ++Y+TDG+LLRE + +
Sbjct: 529 CTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDK 588
Query: 439 SLESYSVLI 447
L+ YSV+I
Sbjct: 589 ELDKYSVII 597
Score = 223 (83.6 bits), Expect = 3.2e-44, Sum P(3) = 3.2e-44
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 554 ICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPK 613
I PIY L +E Q+KIF+ RK++++TNIAETSLT+DGIKYVID G+ K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 614 TGMESLLVNPISKASANQRT 633
GM+ L V PIS+A+ANQR+
Sbjct: 832 IGMDVLQVTPISQANANQRS 851
Score = 214 (80.4 bits), Expect = 4.2e-33, Sum P(3) = 4.2e-33
Identities = 51/141 (36%), Positives = 83/141 (58%)
Query: 410 IRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLIDLINY----RPDLKLLISSATL 465
I + +DK + KY +++ + E S+ + VL+ ++ R DLKL+++SAT+
Sbjct: 579 ILLRETLNDKELDKY---SVIIMDEAHERSINT-DVLLGILKNICLKRNDLKLIVTSATI 634
Query: 466 DAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEP-----IGD 520
DA+ FS +FG+API+ I R + V + Y + P DYIE A+ A+QIHV++ GD
Sbjct: 635 DAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGD 694
Query: 521 ILVFLTGQDQFETAEEILKQR 541
IL+F+TGQ+ +L +R
Sbjct: 695 ILIFMTGQEDINATCYLLSER 715
Score = 59 (25.8 bits), Expect = 4.2e-33, Sum P(3) = 4.2e-33
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 179 TWKEEYDAI-----QRSRKDDGIENLREVSRQKYLPK--RAQKKLEEIKDRTKDKENLFE 231
T KE+YD I + +++DD ++ + + K + ++ K+ KDKE L +
Sbjct: 415 TSKEDYDNISYNSSENNKEDDNGSDVFDYKKDKIYSSLFNIENNNKDKKNTLKDKEELLK 474
Query: 232 -GQKL----TGAELCELDYEKKILDLVGQEG 257
+ L + EL + Y I+ +VG+ G
Sbjct: 475 LKESLPIYKSKHELLDAVYNNNIIIIVGETG 505
Score = 50 (22.7 bits), Expect = 1.0e-31, Sum P(4) = 1.0e-31
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 259 QRCSHESDKQQRKKADL----KYGSKNKKQQYDDYQYVFEIEDKIVDFFR 304
QR + + K ++KK+D KY S NK Q Y V ++D+ DF +
Sbjct: 318 QRNNFDDQKSEKKKSDNINNDKYYS-NKPIQSTSYSTV--VKDETCDFVK 364
Score = 50 (22.7 bits), Expect = 1.0e-31, Sum P(4) = 1.0e-31
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 265 SDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVD--FFRESVELPDKSAVKSALEML 322
S+KQ + K K++KQ+ D Y+ + DKI+D ++ + E D S +E
Sbjct: 170 SNKQHHNRYSNKTFEKDEKQKKDYYK---KNNDKILDEIWYTKEDEFVD-SFYNMDIEAT 225
Query: 323 QEERKTL 329
E+ K +
Sbjct: 226 YEKEKKM 232
Score = 38 (18.4 bits), Expect = 3.2e-44, Sum P(3) = 3.2e-44
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 201 EVSRQKYLPKRAQKKLEEIKDRTKDKEN 228
+VS+ +YL ++K + +D+ K K+N
Sbjct: 77 KVSK-RYLNNNEKEKYYKDRDKNKIKKN 103
Score = 37 (18.1 bits), Expect = 6.5e-25, Sum P(3) = 6.5e-25
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 431 LREIVLEPSLESYSVLIDLINYRPDL---KLLISSATL 465
LR+I++ ++ S+ +D I Y D KL + + T+
Sbjct: 795 LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTI 832
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 331 (121.6 bits), Expect = 3.2e-44, Sum P(3) = 3.2e-44
Identities = 77/189 (40%), Positives = 112/189 (59%)
Query: 263 HESDKQQRKKAD-LKYGSKNKKQQYDDYQYVFEIE-DKIVD--FFRESVELPDKSAVKSA 318
+++D ++ D + Y S ++ D+ VF+ + DKI F E+ K+ +K
Sbjct: 410 NKNDNTSKEDYDNISYNSSENNKEDDNGSDVFDYKKDKIYSSLFNIENNNKDKKNTLKDK 469
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
E+L+ +++LPIY + ELL AV +++IVGETGSGKTTQI QYLYE GY + G I
Sbjct: 470 EELLKL-KESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIIC 528
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEP 438
CTQ EM V +G VGY+IRFED T+ T ++Y+TDG+LLRE + +
Sbjct: 529 CTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDK 588
Query: 439 SLESYSVLI 447
L+ YSV+I
Sbjct: 589 ELDKYSVII 597
Score = 223 (83.6 bits), Expect = 3.2e-44, Sum P(3) = 3.2e-44
Identities = 46/80 (57%), Positives = 60/80 (75%)
Query: 554 ICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPK 613
I PIY L +E Q+KIF+ RK++++TNIAETSLT+DGIKYVID G+ K+K YN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 614 TGMESLLVNPISKASANQRT 633
GM+ L V PIS+A+ANQR+
Sbjct: 832 IGMDVLQVTPISQANANQRS 851
Score = 214 (80.4 bits), Expect = 4.2e-33, Sum P(3) = 4.2e-33
Identities = 51/141 (36%), Positives = 83/141 (58%)
Query: 410 IRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLIDLINY----RPDLKLLISSATL 465
I + +DK + KY +++ + E S+ + VL+ ++ R DLKL+++SAT+
Sbjct: 579 ILLRETLNDKELDKY---SVIIMDEAHERSINT-DVLLGILKNICLKRNDLKLIVTSATI 634
Query: 466 DAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEP-----IGD 520
DA+ FS +FG+API+ I R + V + Y + P DYIE A+ A+QIHV++ GD
Sbjct: 635 DAKKFSAFFGNAPIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGD 694
Query: 521 ILVFLTGQDQFETAEEILKQR 541
IL+F+TGQ+ +L +R
Sbjct: 695 ILIFMTGQEDINATCYLLSER 715
Score = 59 (25.8 bits), Expect = 4.2e-33, Sum P(3) = 4.2e-33
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 179 TWKEEYDAI-----QRSRKDDGIENLREVSRQKYLPK--RAQKKLEEIKDRTKDKENLFE 231
T KE+YD I + +++DD ++ + + K + ++ K+ KDKE L +
Sbjct: 415 TSKEDYDNISYNSSENNKEDDNGSDVFDYKKDKIYSSLFNIENNNKDKKNTLKDKEELLK 474
Query: 232 -GQKL----TGAELCELDYEKKILDLVGQEG 257
+ L + EL + Y I+ +VG+ G
Sbjct: 475 LKESLPIYKSKHELLDAVYNNNIIIIVGETG 505
Score = 50 (22.7 bits), Expect = 1.0e-31, Sum P(4) = 1.0e-31
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 259 QRCSHESDKQQRKKADL----KYGSKNKKQQYDDYQYVFEIEDKIVDFFR 304
QR + + K ++KK+D KY S NK Q Y V ++D+ DF +
Sbjct: 318 QRNNFDDQKSEKKKSDNINNDKYYS-NKPIQSTSYSTV--VKDETCDFVK 364
Score = 50 (22.7 bits), Expect = 1.0e-31, Sum P(4) = 1.0e-31
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 265 SDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVD--FFRESVELPDKSAVKSALEML 322
S+KQ + K K++KQ+ D Y+ + DKI+D ++ + E D S +E
Sbjct: 170 SNKQHHNRYSNKTFEKDEKQKKDYYK---KNNDKILDEIWYTKEDEFVD-SFYNMDIEAT 225
Query: 323 QEERKTL 329
E+ K +
Sbjct: 226 YEKEKKM 232
Score = 38 (18.4 bits), Expect = 3.2e-44, Sum P(3) = 3.2e-44
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 201 EVSRQKYLPKRAQKKLEEIKDRTKDKEN 228
+VS+ +YL ++K + +D+ K K+N
Sbjct: 77 KVSK-RYLNNNEKEKYYKDRDKNKIKKN 103
Score = 37 (18.1 bits), Expect = 6.5e-25, Sum P(3) = 6.5e-25
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 431 LREIVLEPSLESYSVLIDLINYRPDL---KLLISSATL 465
LR+I++ ++ S+ +D I Y D KL + + T+
Sbjct: 795 LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTI 832
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 288 (106.4 bits), Expect = 8.3e-43, Sum P(2) = 8.3e-43
Identities = 72/194 (37%), Positives = 101/194 (52%)
Query: 449 LINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY----------TKAPE 498
++ R D +++ISSAT++ FS YF P+ KI Y V + + TK E
Sbjct: 146 VLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAYPVTVIFDPPDTPASTHTKEAE 205
Query: 499 ADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIY 558
A +E + ++ + G IL+FL G+ + L +L + P+Y
Sbjct: 206 AALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITRLSHERW-----FRKLFLLPLY 260
Query: 559 GNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMES 618
G L E Q ++F P G RKVV+ATNIAETS+TID + VID G K+ SYNP + S
Sbjct: 261 GRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTAS 320
Query: 619 LLVNPISKASANQR 632
L PIS+AS NQR
Sbjct: 321 LDETPISQASCNQR 334
Score = 242 (90.2 bits), Expect = 8.3e-43, Sum P(2) = 8.3e-43
Identities = 52/122 (42%), Positives = 77/122 (63%)
Query: 327 KTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQ-LXXX 385
K LP+Y ++++L A++ + V+V+ TGSGKTTQ+P L+EAGY + G IG TQ
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIA 64
Query: 386 XXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSV 445
Q + V+ G VGY +RFED T +T +K MTDG+LL+E+ L+P L YS+
Sbjct: 65 VLSVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSI 123
Query: 446 LI 447
++
Sbjct: 124 IM 125
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 259 (96.2 bits), Expect = 1.9e-42, Sum P(3) = 1.9e-42
Identities = 59/145 (40%), Positives = 86/145 (59%)
Query: 307 VELPDKSAVKSALEM---LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIP 363
V P K AV + +QEER LPI + +++AV+E+P+++I GETGSGKTTQ+P
Sbjct: 225 VRPPSKPAVFIPVNRSPEMQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVP 284
Query: 364 QYLYEAGYTKQGK-IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVL 422
Q+LYEAGY+ IG T+ +EM + V Y IR+E +++T +
Sbjct: 285 QFLYEAGYSSDNSVIGVTEPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRI 343
Query: 423 KYMTDGMLLREIVLEPSLESYSVLI 447
K+MTDG+LL+EI + L Y V+I
Sbjct: 344 KFMTDGVLLKEIQKDFLLLKYKVVI 368
Score = 209 (78.6 bits), Expect = 1.9e-42, Sum P(3) = 1.9e-42
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + P+Y L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 612 PKTGMESLLVNPISKASANQR 632
TG+ S V +S+ASA+QR
Sbjct: 646 RVTGVSSFRVTWVSQASADQR 666
Score = 115 (45.5 bits), Expect = 1.9e-42, Sum P(3) = 1.9e-42
Identities = 31/78 (39%), Positives = 41/78 (52%)
Query: 456 LKLLISSATLDAENFSD----YFGSAPIFKIPRRRYHVELFYTK-APEADYIEAAIVTAL 510
LKLLI SATL E+F+ + P+ K+ R++ V + + K P DY
Sbjct: 400 LKLLIMSATLRVEDFTQNQRLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVC 459
Query: 511 QIHVNEPIGDILVFLTGQ 528
+IH P G ILVFLTGQ
Sbjct: 460 KIHRMLPAGGILVFLTGQ 477
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 311 (114.5 bits), Expect = 2.6e-42, Sum P(2) = 2.6e-42
Identities = 88/237 (37%), Positives = 133/237 (56%)
Query: 418 DKTVLKYMTDGMLLREIVLEPSLESYSVL---IDLINYRPDLKLLISSATLDAENFSDYF 474
D+ +LKY D +++ E E SL +L ++ RPDLKL+I+SAT+D + F+ +F
Sbjct: 207 DRLLLKY--DTIIIDE-AHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHF 263
Query: 475 GS-----APIFKIPRRRYHVELFYTKAPEADYI--------EAAIVTALQIHVNEPI--- 518
S API ++ R + VE+ Y + I E I++ + V+E
Sbjct: 264 SSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCG 323
Query: 519 -GDILVFLTGQDQF-ETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEG 576
GDILVFL G+ + +TA ++K R + P+Y L Q +IF+P
Sbjct: 324 NGDILVFLNGEREIRDTAAALVKANLRHTN-------VLPLYARLTVSEQNQIFKP--HS 374
Query: 577 ARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
R +VLATN+AETSLT+ GIKYVIDPG A++ Y+ +T ++ L + P+S+ASANQR+
Sbjct: 375 GRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRS 431
Score = 223 (83.6 bits), Expect = 2.6e-42, Sum P(2) = 2.6e-42
Identities = 55/155 (35%), Positives = 85/155 (54%)
Query: 298 KIVDFFRESV--ELPDKSA-VKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGET 354
K+V+ ++ + + DK ++S ++ E LPI ++ A+ V++I GET
Sbjct: 67 KLVEPLQQHILRSIQDKQQKIRSLPKITYPEG--LPISENAAQISAAIDANQVVIIAGET 124
Query: 355 GSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFED 414
GSGKTTQIP+ E G G IG TQ +E+G KLG +VGY +RF D
Sbjct: 125 GSGKTTQIPKICLELGRGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFND 184
Query: 415 CTSDKTVLKYMTDGMLLREIVLEPSLESY-SVLID 448
S+++ +K MTDG+LL E+ + L Y +++ID
Sbjct: 185 QVSEQSYIKLMTDGILLAEMQRDRLLLKYDTIIID 219
>UNIPROTKB|B0V0F7 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 PROSITE:PS00690
GO:GO:0005524 GO:GO:0003676 eggNOG:COG1643 GO:GO:0008026
HGNC:HGNC:2739 EMBL:CR759873 IPI:IPI00894447 SMR:B0V0F7
Ensembl:ENST00000456005 UCSC:uc011elj.1 Uniprot:B0V0F7
Length = 188
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 79/137 (57%), Positives = 111/137 (81%)
Query: 443 YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYI 502
+ ++ D+ +RP+LK+L++SAT+D FS +F AP+F+IP RR+ V++FYTKAPEADY+
Sbjct: 52 FGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYL 111
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
EA +V+ LQIHV +P GDILVFLTGQ++ E A E+L+ R R LG+KI EL++ PIY NLP
Sbjct: 112 EACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLP 171
Query: 563 TELQAKIFEPTPEGARK 579
+++QA+IF+PTP GARK
Sbjct: 172 SDMQARIFQPTPPGARK 188
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 253 (94.1 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 68/195 (34%), Positives = 99/195 (50%)
Query: 262 SHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRES-VELPDKSAVKSA-- 318
S ESD + +K + ++QQ + E + K D E E K K A
Sbjct: 179 SEESDSSEEEKEKISEEKHTEEQQQQVLKE--ETKPKEADMKEEKKAETWTKEDCKPAVF 236
Query: 319 -----LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTK 373
L +QE R LP+ + +++AV ++ +V+ GETGSGKTTQ+PQ+LYEAG+
Sbjct: 237 IPVERLPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFAS 296
Query: 374 QGKI-GCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLR 432
G I G T+ EM + G V Y IR+E ++ T +K MTDG+LL+
Sbjct: 297 SGGIIGVTEPRRVAAISMSHRVATEMNLSSG-VVSYQIRYEGNVTENTKIKVMTDGVLLK 355
Query: 433 EIVLEPSLESYSVLI 447
EI + L+ YSV+I
Sbjct: 356 EIQRDFLLQKYSVII 370
Score = 213 (80.0 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 45/81 (55%), Positives = 56/81 (69%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + P+Y L E QAK+F P P G+R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 580 LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYD 639
Query: 612 PKTGMESLLVNPISKASANQR 632
TG+ S V IS+ASANQR
Sbjct: 640 RVTGVSSFKVTWISQASANQR 660
Score = 115 (45.5 bits), Expect = 3.5e-42, Sum P(3) = 3.5e-42
Identities = 31/78 (39%), Positives = 43/78 (55%)
Query: 456 LKLLISSATLDAENFSD---YFGSAP-IFKIPRRRYHVELFYTK-APEADYIEAAIVTAL 510
+KL+I SATL E+F++ F S P + K+ R++ V + + K P DY
Sbjct: 402 MKLIIMSATLRVEDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKIC 461
Query: 511 QIHVNEPIGDILVFLTGQ 528
+IH P G ILVFLTGQ
Sbjct: 462 KIHRMLPPGGILVFLTGQ 479
Score = 43 (20.2 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 151 DQRGKEELERRIRERDVAATRKLTGPK-LTWKEEYDAIQRSRKDDG------IENLREVS 203
+++ K E+ E+ ++ T PK KEE A +++D +E L E+
Sbjct: 187 EEKEKISEEKHTEEQQQQVLKEETKPKEADMKEEKKAETWTKEDCKPAVFIPVERLPEIQ 246
Query: 204 RQKY-LPKRAQKKLEEIKDRTKDKE 227
+ LP A++++ I + KD E
Sbjct: 247 EARLRLPVLAEEQI--IMEAVKDHE 269
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 235 (87.8 bits), Expect = 4.3e-42, Sum P(3) = 4.3e-42
Identities = 56/151 (37%), Positives = 84/151 (55%)
Query: 308 ELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLY 367
E +K +++ L+ R+ LP + +EE L +VS+ VLV+ GETG GKTTQ+PQ++
Sbjct: 207 ERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFIL 266
Query: 368 EAGYTK-QG---KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLK 423
E + +G I CTQ E G +G VGY IR E SD+T L
Sbjct: 267 EEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLL 326
Query: 424 YMTDGMLLREIVLEPSLESYS-VLIDLINYR 453
+ T G+LLR ++ +P+L + S +L+D I+ R
Sbjct: 327 FCTTGVLLRRLIEDPNLTNVSHLLVDEIHER 357
Score = 230 (86.0 bits), Expect = 4.3e-42, Sum P(3) = 4.3e-42
Identities = 57/135 (42%), Positives = 82/135 (60%)
Query: 498 EADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPI 557
+ D +EA I ++ E G ILVFLTG D+ E + LG ++ ++ P+
Sbjct: 486 DVDLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKINMNNF-LGDS-SKFLVLPL 540
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+G++PT Q +IF+ P RK+VLATNIAE+S+TID + YV+D G AK SY+ +
Sbjct: 541 HGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVA 600
Query: 618 SLLVNPISKASANQR 632
LL + ISKASA+QR
Sbjct: 601 CLLPSWISKASAHQR 615
Score = 114 (45.2 bits), Expect = 4.3e-42, Sum P(3) = 4.3e-42
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELF 492
+L DL+ RPDL+L++ SAT++A+ FS YFG++P IP + V ELF
Sbjct: 367 ILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELF 415
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 256 (95.2 bits), Expect = 6.5e-42, Sum P(3) = 6.5e-42
Identities = 55/129 (42%), Positives = 81/129 (62%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
+QEER LPI + +++AV+E+P++++ GETGSGKTTQ+PQ+LYEAGY+ I G T
Sbjct: 239 MQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGIT 298
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
+ +EM + V Y IR+E +++T +K+MTDG+LL+EI + L
Sbjct: 299 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 357
Query: 441 ESYSV-LID 448
Y V LID
Sbjct: 358 LRYKVVLID 366
Score = 209 (78.6 bits), Expect = 6.5e-42, Sum P(3) = 6.5e-42
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + P+Y L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 612 PKTGMESLLVNPISKASANQR 632
TG+ S V +S+ASA+QR
Sbjct: 642 RVTGVSSFRVTWVSQASADQR 662
Score = 113 (44.8 bits), Expect = 6.5e-42, Sum P(3) = 6.5e-42
Identities = 32/78 (41%), Positives = 41/78 (52%)
Query: 456 LKLLISSATLDAENFSD---YFGSAP-IFKIPRRRYHVELFYTK-APEADYIEAAIVTAL 510
LKLLI SATL E+F+ F P + K+ R++ V + + K P DY
Sbjct: 396 LKLLIMSATLRVEDFTQNQRLFPQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVC 455
Query: 511 QIHVNEPIGDILVFLTGQ 528
+IH P G ILVFLTGQ
Sbjct: 456 KIHRMLPAGGILVFLTGQ 473
Score = 41 (19.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 188 QRSRKDDGIENLREVSRQKYLPKRAQKK-LEEIKDRTKDKENLFEGQKLTGAELCELDYE 246
++ ++D +E +R+ + + K+AQ L +I + EG + AE+ E + E
Sbjct: 496 EKEDQEDSVEEMRKFKKSRTRVKKAQAAMLPQISLDSYSVLPAGEGDEDREAEMDE-EEE 554
Query: 247 KKI---LDL-VGQEG 257
+ LDL +G +G
Sbjct: 555 AALGSDLDLDLGDDG 569
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 253 (94.1 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 52/127 (40%), Positives = 81/127 (63%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
+QEER LPI + +++AV+E+P++++ GETGSGKTTQ+PQ+LYEAG++ + I G T
Sbjct: 32 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 91
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
+ +EM + V Y IR+E +++T +K+MTDG+LL+EI + L
Sbjct: 92 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 150
Query: 441 ESYSVLI 447
Y V+I
Sbjct: 151 LRYKVVI 157
Score = 207 (77.9 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + P+Y L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 612 PKTGMESLLVNPISKASANQR 632
TG+ S V +S+ASA+QR
Sbjct: 435 RVTGVSSFRVTWVSQASADQR 455
Score = 115 (45.5 bits), Expect = 6.6e-42, Sum P(3) = 6.6e-42
Identities = 32/78 (41%), Positives = 41/78 (52%)
Query: 456 LKLLISSATLDAENFSD---YFGSAP-IFKIPRRRYHVELFYTK-APEADYIEAAIVTAL 510
LKLLI SATL E+F+ F P + K+ R++ V + + K P DY
Sbjct: 189 LKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVC 248
Query: 511 QIHVNEPIGDILVFLTGQ 528
+IH P G ILVFLTGQ
Sbjct: 249 KIHRMLPAGGILVFLTGQ 266
Score = 38 (18.4 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 171 RKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLF 230
RK P +E D Q+ D +E +R+ + + K+A + E + D ++
Sbjct: 277 RKAFPPSRARPQEKDDDQK----DSVEEMRKFKKSRARAKKA--RAEVLPQINLDHYSVL 330
Query: 231 EGQKLTGAELCELDYEKKILD 251
+ E+D E+ LD
Sbjct: 331 PAGEGDEDREAEVDEEEGALD 351
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 358 (131.1 bits), Expect = 7.8e-42, Sum P(4) = 7.8e-42
Identities = 71/169 (42%), Positives = 108/169 (63%)
Query: 465 LDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPI-GDILV 523
L E S+ G A + I R++ V+ Y+ P D+++AA+ QIH EPI GDILV
Sbjct: 349 LQKEEKSEKDGIA-VCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILV 407
Query: 524 FLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLA 583
FLTGQ+ E E ++ + G+ + ++ + P++ LP Q ++F P P RK++LA
Sbjct: 408 FLTGQETVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILA 467
Query: 584 TNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
TNIAETS+T+ G++YV+D G AK+K + + G++SLLV PISK++A QR
Sbjct: 468 TNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQR 516
Score = 139 (54.0 bits), Expect = 7.8e-42, Sum P(4) = 7.8e-42
Identities = 27/69 (39%), Positives = 45/69 (65%)
Query: 313 SAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYT 372
+++K +ML E RK LPI+ +E+ Q + + V++++GETGSGK+TQIPQ+L + +
Sbjct: 131 ASLKKKAQMLYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDESWC 190
Query: 373 KQGKIGCTQ 381
+ K Q
Sbjct: 191 RPTKTTIVQ 199
Score = 50 (22.7 bits), Expect = 7.8e-42, Sum P(4) = 7.8e-42
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 41 ADLETKLQEFEFSSTTETRAFAQEIFARVPRKESESKTNT 80
AD ET+L + S+T+E++A A E RKE E+ N+
Sbjct: 58 AD-ETRLHRTKKSNTSESQAAAVE--QNENRKEDEAVNNS 94
Score = 50 (22.7 bits), Expect = 7.8e-42, Sum P(4) = 7.8e-42
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 150 RDQRGKEELERRI--RERDVAA--TR-KLTGPKLTWKEEYDAIQRS--RKDD-GIENLRE 201
R KE + ++ R+RD A TR T T + + A++++ RK+D + N E
Sbjct: 37 RPSDNKENVSKKNKKRKRDQLADETRLHRTKKSNTSESQAAAVEQNENRKEDEAVNNSGE 96
Query: 202 VSRQKYLPK---RAQKKLEEIKDRT-KDKEN 228
+ K LPK QK + R KD+EN
Sbjct: 97 ATIAKSLPKDQPENQKHKRKKHSRPFKDEEN 127
Score = 45 (20.9 bits), Expect = 7.8e-42, Sum P(4) = 7.8e-42
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 456 LKLLISSATLDAENFSDYF 474
LK ++ SAT D E+ ++F
Sbjct: 322 LKAVVMSATADMESLQEFF 340
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 239 (89.2 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 73/248 (29%), Positives = 127/248 (51%)
Query: 215 KLEEIKDRTKDKENLFEGQKLTGAELCELDYEK--KILDLVGQEGLQRCSHESD---KQQ 269
K E K + K ++N E + E E+ E+ +I + V E + R ++ + K++
Sbjct: 295 KTNENKKQNKKQKNKVEEKVKEEEEEEEIKKEELEEIANQVNSE-IDRYNYSIEVFGKEE 353
Query: 270 RKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTL 329
+ ++ +K + +D E++ K +++ +V++ K + + R L
Sbjct: 354 EENREVFLSTKTGIETIEDAMSE-EVDAKPIEYNVFNVKVERKPEIDAV-------RDNL 405
Query: 330 PIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQ------GKIGCTQLX 383
PI +++ + + V++I GETGSGKTTQ+PQ+LYE+G+ + G IG TQ
Sbjct: 406 PIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGVTQPR 465
Query: 384 XXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTV--LKYMTDGMLLREIVLEPSLE 441
+E+ V+ G EVGY IR+ D D +V +K+MTDG+L+RE+ + L
Sbjct: 466 RVAAVSTAKRVAEELNVEFGKEVGYQIRY-DKKLDSSVNKIKFMTDGILMREVQTDFLLS 524
Query: 442 SYS-VLID 448
YS +LID
Sbjct: 525 QYSSILID 532
Score = 210 (79.0 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 47/105 (44%), Positives = 63/105 (60%)
Query: 528 QDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIA 587
+D+FE +E + T L + P+Y LPT Q ++F+ P G+R VV+ATN+A
Sbjct: 824 EDEFEIGKEDII--TEDDEKPAGPLFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLA 881
Query: 588 ETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
ETSLTI IKYV+D G K + YN G+ S V SKASA+QR
Sbjct: 882 ETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQR 926
Score = 132 (51.5 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 34/91 (37%), Positives = 53/91 (58%)
Query: 447 IDLINYRPDLKLLISSATLDAENFSD----YFGSAPIFKIPRRRYHVELFYTKAPE-ADY 501
+D+I Y P LKL++ SATL E+F+ + P+ IP R++ V + + K E +Y
Sbjct: 574 VDMI-Y-P-LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNY 630
Query: 502 IEAAIVTALQIHVNEPIGDILVFLTGQDQFE 532
I+ ++IH N P G ILVF+TG+ + E
Sbjct: 631 IDECYKKVVKIHKNLPSGGILVFVTGKQEIE 661
Score = 44 (20.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 23/111 (20%), Positives = 56/111 (50%)
Query: 193 DDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDL 252
+D IENL ++ +++ EE+++ ++E + E +++ E+ E + E++ ++
Sbjct: 742 NDDIENLDVLNDDQFIVNDE----EEVEEEEVEEEEV-EEEEVEEEEVEEEEVEEEEVE- 795
Query: 253 VGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEI--EDKIVD 301
+E ++ E + ++ ++ D + N + +D FEI ED I +
Sbjct: 796 --EEEVE----EEEVEEEEEVDENENNNNNNNEDEDE---FEIGKEDIITE 837
Score = 37 (18.1 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 154 GKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREV 202
GK+E+E + A K ++K E D I + K D EN +
Sbjct: 656 GKQEIEYLCSKLRRAFPIKAINK--SFKVEIDKINQQFKSDDQENQNNI 702
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 253 (94.1 bits), Expect = 1.5e-41, Sum P(3) = 1.5e-41
Identities = 52/127 (40%), Positives = 81/127 (63%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
+QEER LPI + +++AV+E+P++++ GETGSGKTTQ+PQ+LYEAG++ + I G T
Sbjct: 245 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 304
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
+ +EM + V Y IR+E +++T +K+MTDG+LL+EI + L
Sbjct: 305 EPRRVAAVAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 363
Query: 441 ESYSVLI 447
Y V+I
Sbjct: 364 LRYKVVI 370
Score = 207 (77.9 bits), Expect = 1.5e-41, Sum P(3) = 1.5e-41
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + P+Y L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 612 PKTGMESLLVNPISKASANQR 632
TG+ S V +S+ASA+QR
Sbjct: 648 RVTGVSSFRVTWVSQASADQR 668
Score = 115 (45.5 bits), Expect = 1.5e-41, Sum P(3) = 1.5e-41
Identities = 32/78 (41%), Positives = 41/78 (52%)
Query: 456 LKLLISSATLDAENFSD---YFGSAP-IFKIPRRRYHVELFYTK-APEADYIEAAIVTAL 510
LKLLI SATL E+F+ F P + K+ R++ V + + K P DY
Sbjct: 402 LKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVC 461
Query: 511 QIHVNEPIGDILVFLTGQ 528
+IH P G ILVFLTGQ
Sbjct: 462 KIHRMLPAGGILVFLTGQ 479
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 171 RKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLF 230
RK P +E D Q+ D +E +R+ + + K+A + E + D ++
Sbjct: 490 RKAFPPSRARPQEKDDDQK----DSVEEMRKFKKSRARAKKA--RAEVLPQINLDHYSVL 543
Query: 231 EGQKLTGAELCELDYEKKILD 251
+ E+D E+ LD
Sbjct: 544 PAGEGDEDREAEVDEEEGALD 564
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 302 (111.4 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 56/120 (46%), Positives = 81/120 (67%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXX 387
T PI R++++QAV + L++ G TGSGKTTQ+P+YLYEAG+++ G IG TQ
Sbjct: 32 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 91
Query: 388 XXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+EM LG +VGY +RF+DC+S +T +KYMTDG LL+ I+ +P+L +SV+I
Sbjct: 92 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 151
Score = 161 (61.7 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 38/88 (43%), Positives = 51/88 (57%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 179 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 238
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFE 532
+ + IH+NE GDILVFLTGQ + E
Sbjct: 239 IVKVTMDIHLNEMAGDILVFLTGQFEIE 266
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 254 (94.5 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 52/126 (41%), Positives = 76/126 (60%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQ 381
+Q R LPI +++++ ++E P++++ GETGSGKTTQ+PQ+LYEAGY + IG T+
Sbjct: 253 VQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTE 312
Query: 382 LXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLE 441
EM + EV Y IRFE + T +K+MTDG+LL+EI + L
Sbjct: 313 PRRVAAIAMSKRVAHEMNLPES-EVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLLS 371
Query: 442 SYSVLI 447
YSV+I
Sbjct: 372 KYSVII 377
Score = 194 (73.4 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 43/99 (43%), Positives = 64/99 (64%)
Query: 535 EEILKQRTRGLGTKIAE-LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTI 593
+E+ + G+G+ + L + P+Y L +E Q +IF P P+G R V++TN+AETSLTI
Sbjct: 599 DELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTI 658
Query: 594 DGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
IKYV+D G K + Y+ TG+ + +V SKASA+QR
Sbjct: 659 PHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQR 697
Score = 119 (46.9 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 456 LKLLISSATLDAENFSD---YFG-SAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQ 511
LKL+I SATL +F++ F P+ K+ R++ V + + K DY+ A L+
Sbjct: 409 LKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLK 468
Query: 512 IHVNEPIGDILVFLTGQDQ 530
IH P G IL+F+TGQ +
Sbjct: 469 IHNKLPEGGILIFVTGQQE 487
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 438 (159.2 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 96/189 (50%), Positives = 121/189 (64%)
Query: 453 RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQI 512
R DLK++I SATLDA F YF API +P R + VE+FYT E DYIEA++ T LQI
Sbjct: 252 RSDLKIIIMSATLDAAKFQRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQI 311
Query: 513 HVNEPIGDILVFLTGQDQFETAEEILKQRTRGL--GTKIAELIICPIYGNLPTELQAKIF 570
H E GDIL+FLTG+++ E ++ L + + P+YG LP + Q KIF
Sbjct: 312 HATEAEGDILLFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIF 371
Query: 571 EPTP----EGAR---KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNP 623
P +G R K ++ATNIAETSLTIDGI YV+DPGF+K K YN + +ESLLV P
Sbjct: 372 NAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTP 431
Query: 624 ISKASANQR 632
IS+ASA QR
Sbjct: 432 ISRASAQQR 440
Score = 289 (106.8 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 81/242 (33%), Positives = 123/242 (50%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQY-LY-EAGYTKQGKIGCTQLX 383
R+ LP++ R+E L + ++V VGETGSGKTTQIPQY LY E + + + CTQ
Sbjct: 104 RRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVACTQPR 163
Query: 384 XXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESY 443
E+ V+LG EVGYSIRFE+ T+ T+LKYMTDG LLRE + +P++ Y
Sbjct: 164 RVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDPNMTRY 223
Query: 444 S-VLIDLINYRP---DLKL-LISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPE 498
S ++ID + R D+ + L+ +L + SA + +RY E P
Sbjct: 224 SCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEAPILAVPG 283
Query: 499 ADYIEAAIVTAL--QIHVNEPIGDIL-VFLTGQDQ----FETAEEILKQRTRGLGTKIAE 551
+ TA + ++ + +L + T + F T EE ++ R + ++ E
Sbjct: 284 RTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEVDE 343
Query: 552 LI 553
LI
Sbjct: 344 LI 345
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 251 (93.4 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 58/141 (41%), Positives = 85/141 (60%)
Query: 312 KSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGY 371
K + + +Q+ R LPI+ +++A++E V V+ GETGSGKTTQIPQ+LYEAGY
Sbjct: 219 KKVIVERSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGY 278
Query: 372 TKQGK-IGCTQLXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSDKTVLKYMTDG 428
+G+ IG T+ Q +GV+L EV Y IR+E S+ T + +MTDG
Sbjct: 279 ASEGELIGITE----PRRVAAIAMAQRVGVELAKPDEVSYQIRYEGTRSETTNILFMTDG 334
Query: 429 MLLREIVLEPSLESYSV-LID 448
+L++E+ + L+ YSV LID
Sbjct: 335 VLMKEMEQDVMLKKYSVILID 355
Score = 186 (70.5 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 40/83 (48%), Positives = 54/83 (65%)
Query: 551 ELIIC-PIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKS 609
E + C P+Y L Q ++F+ TP G R V++TN+AETSLTI G+KYVID GF K +
Sbjct: 573 EPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRL 632
Query: 610 YNPKTGMESLLVNPISKASANQR 632
Y+ TG+ V IS+AS +QR
Sbjct: 633 YDSITGVSRFAVCRISQASGDQR 655
Score = 116 (45.9 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 453 RPDLKLLISSATLDAENFSD--YFG--SAPIFKIPRRRYHVELFYTKAPEADYIEAAIVT 508
RP L+L+I SATL ++F+ F + + K+ R++ V + + K DYI +A
Sbjct: 383 RP-LRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRK 441
Query: 509 ALQIHVNEPIGDILVFLTGQDQFETAEEILKQR 541
+IH P G ILVF+TGQ + + LK+R
Sbjct: 442 TCRIHETLPPGAILVFVTGQHEVKQLITKLKKR 474
Score = 54 (24.1 bits), Expect = 1.8e-40, Sum P(4) = 1.8e-40
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 191 RKDDGIENLREVSRQKYLPKRAQKKLEEIKDRT---KDKENLFEGQ---KLTGAELCELD 244
+K+ +EV++ L K+A++KL ++ R + +E LF G +L ++LC+L
Sbjct: 43 KKNRNFAKEKEVAK---LTKQAKRKLAAVQSRKALKQTQEELFAGLAEFQLDPSKLCQLS 99
Query: 245 YEKKI 249
K+
Sbjct: 100 SSTKL 104
Score = 45 (20.9 bits), Expect = 1.5e-39, Sum P(4) = 1.5e-39
Identities = 17/79 (21%), Positives = 37/79 (46%)
Query: 188 QRSRKDDGIENLREVSRQKYLPKRAQKKLEEI--KDRTKDKENLFEGQKLTGAELCELDY 245
+R K+D + + +P +KKLE+ K T K+N ++ A+L +
Sbjct: 3 KRKTKEDNASEDYDANELMIVPGEKRKKLEKSGEKSATGGKKNRNFAKEKEVAKLTK-QA 61
Query: 246 EKKILDLVGQEGLQRCSHE 264
++K+ + ++ L++ E
Sbjct: 62 KRKLAAVQSRKALKQTQEE 80
Score = 40 (19.1 bits), Expect = 5.0e-09, Sum P(3) = 5.0e-09
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 181 KEEYDAIQRSRKDDGI--ENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFE 231
K+ Y + + K+ + + +E ++K + KLE+ K+ T + E+ FE
Sbjct: 472 KKRYPVVYETDKNGEVLVKGTKEW-KEKKVEAAKSIKLEDFKEETPETED-FE 522
Score = 38 (18.4 bits), Expect = 8.1e-39, Sum P(4) = 8.1e-39
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 33 LSKQALSSADLETKLQEFEFSSTTETRAFAQEIFARVPRKESESK 77
LSK+ + KL+ F + TE + Q+ + SE +
Sbjct: 104 LSKEPEKAPVFPEKLKVFSGKTKTEAKRTQQDYYPTDDESSSEEE 148
Score = 37 (18.1 bits), Expect = 1.0e-38, Sum P(4) = 1.0e-38
Identities = 25/116 (21%), Positives = 48/116 (41%)
Query: 220 KDRTKDKENLFEGQKLTGAELCELDYEK-KILDLVGQEGLQRCSHESDKQQRKK-ADLKY 277
K +TK+ +N E EL + EK K L+ G++ + + K+ A L
Sbjct: 3 KRKTKE-DNASEDYDAN--ELMIVPGEKRKKLEKSGEKSATGGKKNRNFAKEKEVAKLTK 59
Query: 278 GSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYP 333
+K K + + + ++++ E P K S+ L +E + P++P
Sbjct: 60 QAKRKLAAVQSRKALKQTQEELFAGLAEFQLDPSKLCQLSSSTKLSKEPEKAPVFP 115
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 212 (79.7 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 48/133 (36%), Positives = 74/133 (55%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQ-----GK 376
+QE R LPI + +++ + V++I G TGSGKTTQ+PQ+L+EAG++ G
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL 436
I TQ +E+ +V Y IRF+ + T +K+MTDG+LLRE+
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 437 EPSLESYS-VLID 448
+ L +YS V++D
Sbjct: 510 DFLLTAYSAVIVD 522
Score = 202 (76.2 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 40/81 (49%), Positives = 57/81 (70%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
+ + P+Y L TE Q K+F+ +PEG R ++ATN+AETS+TI I+YV+D G AK + YN
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYN 761
Query: 612 PKTGMESLLVNPISKASANQR 632
KT ++ V ISKA+A+QR
Sbjct: 762 EKTSVQKFEVRWISKANADQR 782
Score = 148 (57.2 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 36/90 (40%), Positives = 51/90 (56%)
Query: 456 LKLLISSATLDAENFSD---YFG-SAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQ 511
LKL+I SATL +FS+ F PI KI R+Y V + + + + DY++ A
Sbjct: 558 LKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCL 617
Query: 512 IHVNEPIGDILVFLTGQDQFETAEEILKQR 541
IH P G ILVFLTGQ + E ++L++R
Sbjct: 618 IHKRLPAGSILVFLTGQQEVEQLCQMLRKR 647
Score = 49 (22.3 bits), Expect = 7.4e-23, Sum P(3) = 7.4e-23
Identities = 33/184 (17%), Positives = 80/184 (43%)
Query: 192 KDDGIENLREVSRQK-YLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKIL 250
+ GI+ + + R + + R Q+ E+ + +N ++ ++ + + +K+
Sbjct: 13 RQSGIQKMLNLKRARLHRSVREQESSSEVH-ANPEPDNQDSNAEIL-IDVPKEERQKRKQ 70
Query: 251 DLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVD--FFRESVE 308
+L Q L+ +++K+ D KY +NK ++ + + ++ ++ +D S
Sbjct: 71 ELKDQL-LKENEGSISSKKKKRLD-KY-IENKLKKEEVASLIAKLAEERIDTSLLSSSKN 127
Query: 309 LPDKSAVKSALEM-LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLY 367
L ++ K L+ L EE+ LP+ L + V V ++ + +T +Y
Sbjct: 128 LGKQATAKEKLKKSLLEEKLGLPLSDADSRLYKVVD---VETTTTKSSTAETNAPEKYST 184
Query: 368 EAGY 371
+G+
Sbjct: 185 RSGF 188
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 434 (157.8 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 81/179 (45%), Positives = 118/179 (65%)
Query: 456 LKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN 515
LK+++ SAT+D + FS YF AP+ + R++ +++FYTK P+ DY+ AA+V+ QIH
Sbjct: 216 LKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQE 275
Query: 516 EPIG-DILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTP 574
P DILVFLTGQ++ E + + R L +++ P+Y +LP Q ++F+ P
Sbjct: 276 APASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAP 335
Query: 575 EGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
+G RKV+++TNIAETS+TI GIKYV+D G K K YNP +G+E L V +SK A QRT
Sbjct: 336 KGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRT 394
Score = 299 (110.3 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 80/219 (36%), Positives = 115/219 (52%)
Query: 310 PDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEA 369
P S + ALE+ +R++LPI+ R +LL + V++GETGSGKTTQIPQYLYE
Sbjct: 49 PSASPYREALEL---QRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG 105
Query: 370 GYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGM 429
G ++QG I TQ E +LG VGY++RFED TS+ T +K++TDGM
Sbjct: 106 GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGM 165
Query: 430 LLREIVLEPSLESYS-VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRR-Y 487
LLRE + + L YS V++D + R ++ A+ G P+ I
Sbjct: 166 LLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATM 225
Query: 488 HVELF---YTKAPEADYIEAAIVTALQI-HVNEPIGDIL 522
V+LF + +AP Y+E +QI + +P D L
Sbjct: 226 DVDLFSQYFNRAPVL-YLEGR-QHPIQIFYTKQPQQDYL 262
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 311 (114.5 bits), Expect = 4.7e-39, Sum P(3) = 4.7e-39
Identities = 65/153 (42%), Positives = 95/153 (62%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPI-GDILVFLTGQDQFETAEEILK 539
KI R++ VE+ ++ P + + T +IH EP+ GDILVFL GQ+ E + +++
Sbjct: 341 KIEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIE 400
Query: 540 QRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 599
+ L + + ++ P++G L E Q F P RKVVLATNIAETS+T+ G++YV
Sbjct: 401 EYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYV 460
Query: 600 IDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
ID G +K+K Y G+ESLLV+ ISK+SA QR
Sbjct: 461 IDTGKSKMKQYRASLGLESLLVDAISKSSAIQR 493
Score = 116 (45.9 bits), Expect = 4.7e-39, Sum P(3) = 4.7e-39
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 406 VGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS-VLIDLINYRP-DLKLL 459
VGYS+RF+ T +K++T+GMLL+E++ +PSL YS V++D ++ R D+ LL
Sbjct: 225 VGYSVRFDHNVPKGTKIKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLL 280
Score = 110 (43.8 bits), Expect = 4.7e-39, Sum P(3) = 4.7e-39
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEML 322
H+ ++ KK D G +K D K R + P ++ +L L
Sbjct: 55 HDDEEPASKKKDAVPGKNAQKDDSKDSLLSVPSRKKSATG-RGASSKPIQAKGDPSLLPL 113
Query: 323 QEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI 377
RK LPI+ + + + + + VL++VGETGSGK+TQ+PQ+L + + + ++
Sbjct: 114 ---RKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQV 165
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 263 (97.6 bits), Expect = 4.8e-39, Sum P(3) = 4.8e-39
Identities = 68/234 (29%), Positives = 120/234 (51%)
Query: 415 CTSDKTVLKYMTD------GMLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATL 465
CT D + M++ G+++ + V E SL + +L D++ RP+LKL+++ + L
Sbjct: 161 CTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPL 220
Query: 466 DAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFL 525
S Y+G P+ ++ R ++ VE+ Y + D E+ I +IH + GD++VFL
Sbjct: 221 LTSKLSSYYGDVPVIEV-RNKHPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFL 279
Query: 526 TGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGA-------R 578
+ E E++ Q L + +L++ P+Y P E + +F P E R
Sbjct: 280 ACEQDIEKTYELVCQEGSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQR 335
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+VVL T+ E+ + +K+VID G + + YNP+ SL++ PIS++ A R
Sbjct: 336 RVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIR 389
Score = 229 (85.7 bits), Expect = 4.8e-39, Sum P(3) = 4.8e-39
Identities = 53/148 (35%), Positives = 84/148 (56%)
Query: 305 ESVEL-P-DKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQI 362
E +EL P D S L +ER+ LPI+ + ++++ + V+V+ G++ GK++Q+
Sbjct: 36 EDLELNPFDGLPYSSRYYKLLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQV 95
Query: 363 PQYLYE---AGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDK 419
PQ+ E + + + G + CTQ EM V +GHEVGY I FE+C + +
Sbjct: 96 PQWCAEYCLSIHYQHGGVICTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTE 155
Query: 420 TVLKYMTDGMLLREIVLEPSLESYSVLI 447
T+L+Y TD ML RE++ P L SY V+I
Sbjct: 156 TILRYCTDDMLQREMMSNPFLGSYGVII 183
Score = 49 (22.3 bits), Expect = 4.8e-39, Sum P(3) = 4.8e-39
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 90 DDDVIRITASTNKKRFRKRIGSEDDDDEGI 119
++++ AS K+ F + + S D D+EG+
Sbjct: 3 EEELDHPNASPEKRYFPESLDSSDGDEEGV 32
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 427 (155.4 bits), Expect = 7.1e-39, P = 7.1e-39
Identities = 80/179 (44%), Positives = 118/179 (65%)
Query: 456 LKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN 515
LK+++ SAT+D + FS YF AP+ + R++ +++FYTK P+ DY+ AA+V+ QIH
Sbjct: 135 LKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQE 194
Query: 516 EPIG-DILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTP 574
P DILVFLTGQ++ E + + + L +++ P+Y +LP Q ++F+ P
Sbjct: 195 APSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAP 254
Query: 575 EGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
+G RKV+++TNIAETS+TI GIKYV+D G K K YNP +G+E L V +SK A QRT
Sbjct: 255 KGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRT 313
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 37/121 (30%), Positives = 57/121 (47%)
Query: 406 VGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS-VLIDLINYRPDLKLLISSAT 464
VGY++RF+D TS+ T +K++TDGMLLRE + + L YS V++D + R ++
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 465 LDAENFSDYFGSAPIFKIPRRR-YHVELF--YTKAPEADYIEAAIVTALQIHVNEPIGDI 521
A+ G P+ I V+LF Y Y+E + +P D
Sbjct: 121 KAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDY 180
Query: 522 L 522
L
Sbjct: 181 L 181
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 261 (96.9 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 68/234 (29%), Positives = 120/234 (51%)
Query: 415 CTSDKTVLKYMTD------GMLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATL 465
CT D + M++ G+++ + V E SL + +L D++ RP+LKL+I+ +
Sbjct: 168 CTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPF 227
Query: 466 DAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFL 525
S Y+G+ P+ ++ R ++ VE+ Y + D E+ + +IH + GD++VFL
Sbjct: 228 LISRLSSYYGNVPLLEV-RNKHPVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVVFL 286
Query: 526 TGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPE-------GAR 578
+ E EI+ Q L + EL++ P+Y P E + +F P E R
Sbjct: 287 ACEQDIEKTYEIVCQEGSNLNPDVGELVVIPLY---PKE-KCSLFRPVDETEKRCQASQR 342
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+VVL T+ E+ + +++VID G + + YNP+ SL++ PIS++ A R
Sbjct: 343 RVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIR 396
Score = 228 (85.3 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 52/148 (35%), Positives = 85/148 (57%)
Query: 305 ESVEL-P-DKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQI 362
E +EL P D S L +ER+ LPI+ + ++++ + V+++ G++ GK++Q+
Sbjct: 43 EDLELNPFDGLPYSSRYYKLLKEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQV 102
Query: 363 PQYLYE---AGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDK 419
PQ+ E + + + G + CTQ+ EM V +GHEVGY I FE+C + +
Sbjct: 103 PQWCAEYCLSIHYQHGGVICTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTE 162
Query: 420 TVLKYMTDGMLLREIVLEPSLESYSVLI 447
T+L+Y TD ML RE++ P L SY V+I
Sbjct: 163 TILRYCTDDMLQREMMSNPFLGSYGVII 190
Score = 49 (22.3 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 90 DDDVIRITASTNKKRFRKRIGSEDDDDEGI 119
++++ AS K+ F + + S D D+EG+
Sbjct: 10 EEELEHPNASPEKRYFPESLDSSDGDEEGV 39
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 427 (155.4 bits), Expect = 2.4e-38, P = 2.4e-38
Identities = 80/179 (44%), Positives = 118/179 (65%)
Query: 456 LKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN 515
LK+++ SAT+D + FS YF AP+ + R++ +++FYTK P+ DY+ AA+V+ QIH
Sbjct: 225 LKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQE 284
Query: 516 EPIG-DILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTP 574
P DILVFLTGQ++ E + + + L +++ P+Y +LP Q ++F+ P
Sbjct: 285 APSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAP 344
Query: 575 EGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
+G RKV+++TNIAETS+TI GIKYV+D G K K YNP +G+E L V +SK A QRT
Sbjct: 345 KGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRT 403
Score = 289 (106.8 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 75/217 (34%), Positives = 108/217 (49%)
Query: 310 PDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEA 369
P S A+E+ +R++LPI+ R +LL + V++GETGSGKTTQIPQYLYE
Sbjct: 58 PSASPYPEAVEL---QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEG 114
Query: 370 GYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGM 429
G ++QG I TQ E +LG VGY++RF+D TS+ T +K++TDGM
Sbjct: 115 GISRQGIIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGM 174
Query: 430 LLREIVLEPSLESYS-VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRR-Y 487
LLRE + + L YS V++D + R ++ A+ G P+ I
Sbjct: 175 LLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATM 234
Query: 488 HVELF--YTKAPEADYIEAAIVTALQIHVNEPIGDIL 522
V+LF Y Y+E + +P D L
Sbjct: 235 DVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYL 271
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 255 (94.8 bits), Expect = 5.1e-38, Sum P(3) = 5.1e-38
Identities = 69/235 (29%), Positives = 124/235 (52%)
Query: 415 CTSDKTVLKYMTD------GMLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATL 465
CT D + M++ G+++ + V E S+ + +L D++ RP+LKL+I+S+
Sbjct: 161 CTDDMLQREMMSNPFLGSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSSPH 220
Query: 466 DAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFL 525
S Y+G+ P+ ++ +R VE+ Y + + +EA + +IH + GDI+VFL
Sbjct: 221 LISTLSSYYGNVPLIEVTSKR-PVEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDIVVFL 279
Query: 526 TGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGA-------R 578
+ E A EI+ Q L + EL++ P+Y P E + +F+P E R
Sbjct: 280 ACEQDIEKAYEIVCQEGTNLNPDLGELVVVPLY---PKE-KCALFKPNDEAEKRCQVYQR 335
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKS-YNPKTGMESLLVNPISKASANQR 632
+VVL + E+ + + +++VID G + K Y+P+ +SL++ PIS++ A R
Sbjct: 336 RVVLTASSGESLIWSNTVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMR 390
Score = 229 (85.7 bits), Expect = 5.1e-38, Sum P(3) = 5.1e-38
Identities = 58/152 (38%), Positives = 84/152 (55%)
Query: 305 ESVEL-P-DKSAVKSALEMLQEERKTLPI----YPFREELLQAVSEYPVLVIVGETGSGK 358
E +EL P D S L +ER+ LPI Y F E LLQ+ V+++ G+ GK
Sbjct: 36 EDLELNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQS----QVVIVSGDATCGK 91
Query: 359 TTQIPQYLYE---AGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDC 415
++Q+PQ+ E + + + G + CTQ+ EM V +GHEVGY I FE+C
Sbjct: 92 SSQVPQWCAEYCLSIHYQHGGVVCTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENC 151
Query: 416 TSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+ +T+L+Y TD ML RE++ P L SY V+I
Sbjct: 152 CTSETILRYCTDDMLQREMMSNPFLGSYGVII 183
Score = 48 (22.0 bits), Expect = 5.1e-38, Sum P(3) = 5.1e-38
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 98 ASTNKKRFRKRIGSEDDDDEGI 119
+S+ K+ F + + S D D+EGI
Sbjct: 11 SSSEKRYFPESLDSSDGDEEGI 32
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 250 (93.1 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 53/106 (50%), Positives = 70/106 (66%)
Query: 527 GQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNI 586
G + E EE K GT + + + P+Y LPT+ Q ++FEP P+G+R VVLATN+
Sbjct: 650 GSEGDENEEEEFKIEEEEAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNV 709
Query: 587 AETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
AETSLTI GI+YV D G +K + Y+ TG++S V ISKASANQR
Sbjct: 710 AETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQR 755
Score = 238 (88.8 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 50/131 (38%), Positives = 74/131 (56%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQ-----GK 376
+Q R LP+ + +++A+ ++V+ G TGSGKTTQIPQ+L+EAGY G
Sbjct: 350 IQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGM 409
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL 436
IG TQ +E+G +VGY IRFE + T +K+MTDG+LLRE+
Sbjct: 410 IGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVAQ 468
Query: 437 EPSLESYSVLI 447
+ +L YS ++
Sbjct: 469 DLALRKYSAIV 479
Score = 130 (50.8 bits), Expect = 1.9e-26, Sum P(3) = 1.9e-26
Identities = 43/142 (30%), Positives = 69/142 (48%)
Query: 408 YSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLIDLINYRPDLKLLISSATLDA 467
YS D +++V + GML R I L + + +P LKL+I SATL
Sbjct: 475 YSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTV-----KP-LKLVIMSATLRI 528
Query: 468 ENFSD---YFGSAP-IFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILV 523
E+ ++ F + P + ++ R+Y V L + + DY+E A + H P G +LV
Sbjct: 529 EDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPPGGMLV 588
Query: 524 FLTGQDQFETAEEILKQRTRGL 545
FLTGQ++ + LK + G+
Sbjct: 589 FLTGQNEITQLSKRLKLQFNGV 610
Score = 50 (22.7 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 34/139 (24%), Positives = 62/139 (44%)
Query: 206 KYLPKRAQKKLEEIKDRTKDKENLFEGQK-LTGAELCELDYEKKILDLVGQEGLQRCSHE 264
K++P++ ++K+ + ++R EGQ + AE E + + + L+
Sbjct: 3 KFVPRQRKRKVLD-RERAAAARQFEEGQDAVDAAETPEGGHVAAETARL-KANLRDKGLP 60
Query: 265 SDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVD--FFRESVELPDKSAVK-SAL-E 320
++ K+ + +K KK++ + + + ++ VD F S L K AL +
Sbjct: 61 VSAKKAKRLEKYIEAKLKKEE--NRELLAKLAANKVDTSLFSSSKTLGQTRQTKRQALSQ 118
Query: 321 MLQEERKTLPIYPFREELL 339
L EER LP REELL
Sbjct: 119 ALNEERAGLPGNATREELL 137
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 262 (97.3 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 75/282 (26%), Positives = 137/282 (48%)
Query: 177 KLTWKE--EYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQK 234
K W++ E + +++ K+D ++ + + + + Q++ +++ E +
Sbjct: 245 KYNWRQRVEMEELKKHGKEDEMDF--DTTSEDDDEEEDQEEEDKMHPSENPLEEVESADS 302
Query: 235 LTGAELCEL-DYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVF 293
TG+E + D + D QE +++ + ++ Y +K+ DD
Sbjct: 303 ETGSEKFDQNDVANEFKDWANQE-IKKLEGRDQELVTPTLNIDYKPIIRKEDLDD----- 356
Query: 294 EIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
+++ V S V + E +Q+ R LP++ ++++A+ V++I GE
Sbjct: 357 GLQEAYVPINENSTRKAFYVEVSRSDE-IQKARIQLPVFGEEHKIMEAIHHNDVVIICGE 415
Query: 354 TGSGKTTQIPQYLYEAGYTKQ------GKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVG 407
TGSGKTTQ+PQ+LYEAG+ + G +G TQ E+G GH+VG
Sbjct: 416 TGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVG 474
Query: 408 YSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS-VLID 448
Y IRF+ + T +K+MTDG+LLRE++ + L YS ++ID
Sbjct: 475 YQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTKYSSIIID 516
Score = 228 (85.3 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 47/108 (43%), Positives = 72/108 (66%)
Query: 527 GQDQFETAEEILKQ-RTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATN 585
G+D+ + EE ++ T G T L + P+Y LPT+ Q ++F+ P+G+R ++ATN
Sbjct: 704 GEDEEDEEEEGFEEVLTEGQ-TANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATN 762
Query: 586 IAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
+AETSLTI G++YV+D G +K + YN G++S V +SKASANQR+
Sbjct: 763 VAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRS 810
Score = 118 (46.6 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 408 YSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLIDLINYRPDLKLLISSATLDA 467
YS D ++ + + GML R + L L + I ++ LKL+I SATL
Sbjct: 510 YSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENP----IEHKK-LKLIIMSATLRV 564
Query: 468 ENFSD---YFGSAP-IFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILV 523
+FS+ F AP + ++ R++ V + + + +Y + A +IH P G ILV
Sbjct: 565 SDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAILV 624
Query: 524 FLTGQDQ 530
FLTGQ +
Sbjct: 625 FLTGQQE 631
Score = 58 (25.5 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 167 VAATRKLTGPKLTWKEEY-DAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKD 225
+ ++++L + T KEE+ +A+ R+ G E E+ ++Y PK + E D
Sbjct: 127 LTSSKRLGEGRQTKKEEFKEALSLERQGRGNEQTNEILYEEYEPKVWDEYGEGGSSEDDD 186
Query: 226 KENLFE 231
E+ FE
Sbjct: 187 GEDDFE 192
Score = 55 (24.4 bits), Expect = 3.8e-23, Sum P(3) = 3.8e-23
Identities = 30/102 (29%), Positives = 43/102 (42%)
Query: 181 KEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAEL 240
+EE I +D I+ S K L + Q K EE K+ E G + T L
Sbjct: 107 REERKTIIGKLQDYKIDTSLLTS-SKRLGEGRQTKKEEFKEALS-LERQGRGNEQTNEIL 164
Query: 241 CELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNK 282
E +YE K+ D G+ G S + D + +A +GS K
Sbjct: 165 YE-EYEPKVWDEYGEGG---SSEDDDGEDDFEAS--FGSMPK 200
Score = 47 (21.6 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 2 DSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQE--FEFSSTTETR 59
D + K W + ++ L G Q V + K + DL+ LQE + + +
Sbjct: 313 DVANEFKDWANQEIKKLEGRDQELVTPTLNIDYKPIIRKEDLDDGLQEAYVPINENSTRK 372
Query: 60 AFAQEIFA--RVPRKESE----SKTNTILDAAHYDADDDVIRITAST 100
AF E+ + + + + + I++A H++ DV+ I T
Sbjct: 373 AFYVEVSRSDEIQKARIQLPVFGEEHKIMEAIHHN---DVVIICGET 416
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 421 (153.3 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 132/446 (29%), Positives = 210/446 (47%)
Query: 210 KRAQKKLEEIKDRTKDKENLFEGQKLTGAE-LCELDYEKKILDLVGQEGLQ-RCSHESDK 267
++ Q+ EE D D+ + L E E++ I + E L R E +
Sbjct: 66 EKPQESPEEQLDLVADQGEPCTEEPLPQHEGFEEIEVTDDIDETEEPENLPTRTQQEKHQ 125
Query: 268 QQRKKADLKYGSKNKKQQYDDYQYVF-EIEDKIVDFFRESVELPDKSA----VKSALEML 322
+ K K K K Y D E E+ +F + S +L + ++ L +
Sbjct: 126 HSKNKFKQKLEFKRKTVVYKDQDDEDDEEENNTFNFSQNSFQLAATAQQLLQIREKLPIY 185
Query: 323 QEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQ--IPQYLYEAGYTKQGKIGCT 380
+ K + Y ++ + E G S + Q +P+ G T+ ++
Sbjct: 186 HHKDKIIE-YINNNQVTIVIGE------TGSGKSTQIPQFLMPENPKMIGVTQPRRVAAA 238
Query: 381 QLXXXXXXXXXXXXXQEMG--VKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLR--EIVL 436
L Q++G V+ + + + T + + M D L + I+L
Sbjct: 239 SLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLTKYSTIIL 298
Query: 437 EPSLESYSVLIDLI----------NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRR 486
+ + E ++L DLI R DLK+++ SATL+AE FS++FG+API I +
Sbjct: 299 DEAHER-TILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEGKM 357
Query: 487 YHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG 546
Y V FY A D ++ I + +QI++NEP GD+L FL GQ++ + + L+Q L
Sbjct: 358 YPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKSLEQLAPQLP 417
Query: 547 TKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAK 606
+ ++ P+Y L Q+KIFE P+G RKV+LATNIAETS+T+ G+KYVID G K
Sbjct: 418 REAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRK 477
Query: 607 VKSYNPKTGMESLLVNPISKASANQR 632
+K + G+ +LL PIS+ASA QR
Sbjct: 478 IKVWKHNLGLSTLLTTPISQASARQR 503
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 306 (112.8 bits), Expect = 4.4e-37, Sum P(2) = 4.4e-37
Identities = 79/223 (35%), Positives = 116/223 (52%)
Query: 297 DKIVDFFRESVELPD---KSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
+++ +F R + D K A L LQ ER LPI + +LQ + E+ V+V+ G+
Sbjct: 128 ERVAEFRRALLHYLDFGQKQAF-GRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGD 186
Query: 354 TGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFE 413
TG GK+TQ+PQYL AG++ + CTQ E + G +VGY IRFE
Sbjct: 187 TGCGKSTQVPQYLLAAGFSH---VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFE 243
Query: 414 DCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI-D------------------LINYRP 454
S T + ++T G+LLR+I EPSL Y VLI D L+ RP
Sbjct: 244 STRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRP 303
Query: 455 DLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAP 497
DLK+++ SAT++ FS YF +AP+ ++P R + + +F P
Sbjct: 304 DLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVFDVAPP 346
Score = 164 (62.8 bits), Expect = 4.4e-37, Sum P(2) = 4.4e-37
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 569 IFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKAS 628
+F+ P G RK +L+TNIAETS+TIDGI++V+D G K SY+P+ ++ L IS+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 629 ANQR 632
A QR
Sbjct: 400 AEQR 403
Score = 37 (18.1 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 199 LREVSRQKYLPKRAQKKLEEIKDR 222
LR++ R+ LP+ ++E+ +R
Sbjct: 261 LRQIQREPSLPQYEVLIVDEVHER 284
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 273 (101.2 bits), Expect = 9.8e-37, Sum P(3) = 9.8e-37
Identities = 56/132 (42%), Positives = 85/132 (64%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGY-TKQ-----G 375
++E RK LPI +E+++A++ +P ++I G+TG GKTTQ+PQ+LYEAG+ +KQ G
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSG 293
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
IG TQ E+GV+LG EVG+ +R++ + + +K+MTDG+LLREI
Sbjct: 294 IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353
Query: 436 LEPSLESYSVLI 447
+ L YSV+I
Sbjct: 354 NDFLLRRYSVII 365
Score = 212 (79.7 bits), Expect = 9.8e-37, Sum P(3) = 9.8e-37
Identities = 45/82 (54%), Positives = 59/82 (71%)
Query: 551 ELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSY 610
+L + P+Y L Q ++FE + R VV+ATN+AETSLTI GIKYV+D G KVK+Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 611 NPKTGMESLLVNPISKASANQR 632
+ KTGMES V+ IS+ASA+QR
Sbjct: 706 DSKTGMESYEVDWISQASASQR 727
Score = 142 (55.0 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 48/157 (30%), Positives = 79/157 (50%)
Query: 408 YSIRFEDCTSDKTVLKYMTDGMLLREIVL--------EPSLESYSVLIDLINYRPDLKLL 459
YS+ D ++++ + GML R I + + SL+S + P LKL+
Sbjct: 361 YSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITP-LKLI 419
Query: 460 ISSATLDAENFSD---YFGSAP-IFKIPRRRYHVELFYTKAPE-ADYIEAAIVTALQIHV 514
+ SATL E+F F + P + ++P R+Y V + ++K E DYI A + IH
Sbjct: 420 LMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHK 479
Query: 515 NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAE 551
P G ILVF+TGQ + + E L++ ++ L + A+
Sbjct: 480 KLPQGGILVFVTGQREVDYLCEKLRKSSKELVVQAAK 516
Score = 43 (20.2 bits), Expect = 9.8e-37, Sum P(3) = 9.8e-37
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 188 QRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLF 230
++SRK N+ V+ + KR KKLEE D K+KE LF
Sbjct: 40 KKSRKRKLNSNVNTVACKSQ--KRKLKKLEE--D--KEKEILF 76
Score = 40 (19.1 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 2 DSEDNLKTWVSDKLISLLGYSQPAVVQYVIGLSKQALSSADLETKLQEFE 51
D ED++ + ++ +++ G PA V +V ++ + DL + E E
Sbjct: 200 DDEDSMDGLIENEDVTVQGPRVPAFVVHVSRPAEVEETRKDLPIVMMEQE 249
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 231 (86.4 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 54/140 (38%), Positives = 81/140 (57%)
Query: 453 RPDLKLLISSATLDAENFSDYFG----SAP------IFKIPRRRYHVELFYTKAPEADYI 502
R DL+L+++SATLDA+ F D+F S P I + R + V++FY ++P DYI
Sbjct: 164 RGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYI 223
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGL---GTKIAELIICPIYG 559
++ + T ++IH E GD+L FLTGQ++ ET +L ++ R L G K L + P+Y
Sbjct: 224 KSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMK-RHLRVLPMYA 282
Query: 560 NLPTELQAKIFEPTPEGARK 579
LP+ Q K+FE RK
Sbjct: 283 GLPSFEQMKVFERVSRSVRK 302
Score = 197 (74.4 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 39/86 (45%), Positives = 56/86 (65%)
Query: 364 QYLYEAGYTKQGKI-GCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSD-KTV 421
+YL EAG+T +G++ G TQ +E G LGHEVGY IRF+DCT T
Sbjct: 54 KYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATR 113
Query: 422 LKYMTDGMLLREIVLEPSLESYSVLI 447
+K++TDGML+RE++++P L YSV++
Sbjct: 114 IKFLTDGMLVREMMVDPLLTKYSVIM 139
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 377 (137.8 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 86/196 (43%), Positives = 120/196 (61%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 122 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 181
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-------TKIAELIICPI 557
+ + IH+NE GDILVFLTGQ + E + E+L Q + T + L+I P
Sbjct: 182 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 241
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++ T+ Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NP+ G++
Sbjct: 242 YGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLD 301
Query: 618 SLLVNPISKASANQRT 633
L V PISK+ A QR+
Sbjct: 302 ILEVVPISKSEALQRS 317
Score = 82 (33.9 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 419 KTVLKYMTDGMLLREIVLEPSLESYSVLI 447
+T +KYMTDG LL+ I+ +P+L +SV+I
Sbjct: 66 ETAIKYMTDGCLLKHILGDPNLTKFSVII 94
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 210 (79.0 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 52/159 (32%), Positives = 85/159 (53%)
Query: 305 ESVELPDKSAVKSALEMLQ---EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQ 361
E+V++ + +K A Q +ER++LP + RE +L+ +S++ VLV+ G TG GKTTQ
Sbjct: 510 ENVKICKQFRIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQ 569
Query: 362 IPQYLYEAGYT----KQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS 417
IPQ++ + K I CTQ +E ++G VGY IR E S
Sbjct: 570 IPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKS 629
Query: 418 DKTVLKYMTDGMLLREIVLEPSLESYS-VLIDLINYRPD 455
T L Y T G+LLR + + +L+ + +++D ++ R +
Sbjct: 630 SATRLLYCTTGVLLRRLEGDTALQGVTHIIVDEVHERTE 668
Score = 200 (75.5 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 49/127 (38%), Positives = 72/127 (56%)
Query: 506 IVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTEL 565
IV + +P G ILVFL G + + E L+ + + +I P++ +L +E
Sbjct: 831 IVDGKHSYPPDP-GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEE 889
Query: 566 QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPIS 625
Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL +S
Sbjct: 890 QQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVS 949
Query: 626 KASANQR 632
+A+A QR
Sbjct: 950 QANALQR 956
Score = 121 (47.7 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ RP L++++ SATL+AE FS+YF S P+ IP R + V+ F+
Sbjct: 676 VLKDIVLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQFF 724
Score = 44 (20.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 182 EEYDAIQRSRKDDG---IENLREVSRQKYLPKRAQKKLEEIKD 221
E+ A+ R DG +++++S++K +R++ EE+++
Sbjct: 726 EDAIAVTRYVLQDGSPYARSMKQMSKEKLKARRSRTAFEEVEE 768
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 241 (89.9 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 58/158 (36%), Positives = 88/158 (55%)
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTK------ 373
+ +Q++R LP++ +++AV + +++ GETGSGKTTQ+PQ+LYEAG+
Sbjct: 434 DSIQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLY 493
Query: 374 QGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDK-----TVLKYMTDG 428
G IG TQ E+G GH VGY IRF+ ++ T LK+MTDG
Sbjct: 494 PGMIGVTQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDG 552
Query: 429 MLLREIVLEPSLESYS-VLIDLINYRP-DLKLLISSAT 464
+LLRE++ + L YS ++ID + R + +LI T
Sbjct: 553 VLLREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLT 590
Score = 231 (86.4 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 46/104 (44%), Positives = 70/104 (67%)
Query: 529 DQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAE 588
++ E EE ++ +++ L + P+Y LPT+ Q K+FE P G+R ++ATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 589 TSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
TSLTI GI+YV+D G +K + YN + G++S V+ +SKASANQR
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQR 851
Score = 154 (59.3 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 45/137 (32%), Positives = 68/137 (49%)
Query: 408 YSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLIDLINYRPDLKLLISSATLDA 467
YS D ++ + + GML R + L + + Y+P LKL+I SATL
Sbjct: 567 YSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQL----YKP-LKLIIMSATLRV 621
Query: 468 ENFSD---YFGSAP-IFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILV 523
+FS+ F + P I + R+Y V + + K DY+E A +IH P G IL+
Sbjct: 622 SDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKKTCKIHRKLPEGGILI 681
Query: 524 FLTGQDQFETAEEILKQ 540
FLTGQ++ T + L+Q
Sbjct: 682 FLTGQNEITTLVKKLRQ 698
Score = 54 (24.1 bits), Expect = 3.4e-36, Sum P(3) = 3.4e-36
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 156 EEL-ERRIRERDVAATRKLTGPKLTWKEEY-DAIQRSRKDDGIENLREV 202
E+L E ++ + AA ++L K T KEE +A++ R+ EN REV
Sbjct: 115 EKLAETKMDTSNFAALKELGKGKQTKKEEMIEALELERQGRADENTREV 163
Score = 45 (20.9 bits), Expect = 2.9e-35, Sum P(3) = 2.9e-35
Identities = 43/211 (20%), Positives = 72/211 (34%)
Query: 106 RKRIGSEDDDDEGIASXXXXXXXXXXXXXXXXXXXXXXXXXXRLRDQ-------RGKEEL 158
+KR+ EDDDD AS LRD +EE
Sbjct: 249 KKRLKKEDDDD--FASSSEDEEESDNSNADDMNTSEETVEADELRDSDVAEDSDSNEEES 306
Query: 159 ERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEE 218
E I + + + G + EE + DD E E S+ R
Sbjct: 307 EHEINP-EAGESAESEGDSSSEVEEEE--DDDDDDDDEEEEEEESKLMKSKPRHSTTAAS 363
Query: 219 IKDRTKDKENLFEGQ--KLTGAELCELDYEKKILDLVGQEGLQRCSHES-----DKQQRK 271
K+ + + + EG+ + E+ E +K V E + S E +K+ ++
Sbjct: 364 FKEWAEQQVRIMEGRDKNVLTPEVSEEIKKKYSKQTVRDEDVDHSSDEEGYIPINKEMQR 423
Query: 272 KADL-KYGSKNKKQQYDDYQYVFEIEDKIVD 301
+A + + + QQ VF E +I++
Sbjct: 424 RAFVVEVNRTDSIQQQRALLPVFAEEHRIME 454
Score = 38 (18.4 bits), Expect = 1.9e-25, Sum P(3) = 1.9e-25
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK 376
++ +EE+K L E+L + + + E G GK T+ + + +QG+
Sbjct: 104 QLKREEKKIL-----LEKLAETKMDTSNFAALKELGKGKQTKKEEMIEALELERQGR 155
Score = 38 (18.4 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 466 DAENFSDYFGSAPIFK-IPRRRYHVEL 491
D ++ SD G PI K + RR + VE+
Sbjct: 404 DVDHSSDEEGYIPINKEMQRRAFVVEV 430
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 207 (77.9 bits), Expect = 4.8e-36, Sum P(3) = 4.8e-36
Identities = 53/159 (33%), Positives = 87/159 (54%)
Query: 303 FRESVELPDKSAV-KSALE--MLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKT 359
++ S++L D+ ++++E + + R +LP + R +L A+S+ V+VI GETG GKT
Sbjct: 191 WQRSLQLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKT 250
Query: 360 TQIPQYLYEAGY-TKQG---KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDC 415
TQIPQ++ E+ +G I CTQ E G +LG VGY +R E
Sbjct: 251 TQIPQFILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGV 310
Query: 416 TSDKTVLKYMTDGMLLREIVLEPSLESYS-VLIDLINYR 453
T L + T G+LLR ++++ +L + V++D I+ R
Sbjct: 311 KGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHER 349
Score = 206 (77.6 bits), Expect = 4.8e-36, Sum P(3) = 4.8e-36
Identities = 57/150 (38%), Positives = 78/150 (52%)
Query: 483 PRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRT 542
P R + +Y + IE + + NE G IL+FLTG D + +E L+
Sbjct: 466 PETRESLSCWYPDCIGFNLIEFLLCNICE---NEGPGGILIFLTGWDDISSLKEKLQIHP 522
Query: 543 RGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 602
+ L+ C +G++ T Q IFE G RK+VLATNIAETS+TI+ + +VID
Sbjct: 523 IFGNPDLVMLLAC--HGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDC 580
Query: 603 GFAKVKSYNPKTGMESLLVNPISKASANQR 632
G AK SY+ LL + ISK SA QR
Sbjct: 581 GKAKETSYDALNNTPCLLPSWISKVSAQQR 610
Score = 112 (44.5 bits), Expect = 4.8e-36, Sum P(3) = 4.8e-36
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV 489
+L DL++ R +LKL++ SATLDAE FS YFG A + IP Y V
Sbjct: 359 ILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPV 403
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 206 (77.6 bits), Expect = 7.3e-36, Sum P(4) = 7.3e-36
Identities = 50/133 (37%), Positives = 75/133 (56%)
Query: 500 DYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYG 559
+ IEA + + + P G ILVFL G + + E L+ + + +I P++
Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL
Sbjct: 889 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 948
Query: 620 LVNPISKASANQR 632
+S+A+A QR
Sbjct: 949 EDTFVSQANALQR 961
Score = 199 (75.1 bits), Expect = 7.3e-36, Sum P(4) = 7.3e-36
Identities = 51/149 (34%), Positives = 78/149 (52%)
Query: 312 KSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGY 371
K A + +LQE R++LP + RE +L + ++ V+VI G TG GKTTQIPQ++ +
Sbjct: 528 KQASRQFQSILQE-RQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSL 586
Query: 372 T----KQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 427
K I CTQ +E ++G VGY IR E S T L Y T
Sbjct: 587 NGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTT 646
Query: 428 GMLLREIVLEPSLESYS-VLIDLINYRPD 455
G+LLR + + +L+ S +++D ++ R +
Sbjct: 647 GVLLRRLEGDTALQGVSHIIVDEVHERTE 675
Score = 129 (50.5 bits), Expect = 7.3e-36, Sum P(4) = 7.3e-36
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D+++ RP L++++ SATL+AE FSDYF S P+ IP R + V+ F+
Sbjct: 683 VLKDIVSQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFF 731
Score = 45 (20.9 bits), Expect = 2.8e-11, Sum P(3) = 2.8e-11
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 182 EEYDAIQRSRKDDG---IENLREVSRQKYLPKRAQKKLEEIKD 221
E+ A+ R DG + +++++S++K +R + EE+++
Sbjct: 733 EDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEE 775
Score = 37 (18.1 bits), Expect = 7.3e-36, Sum P(4) = 7.3e-36
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 64 EIFARVPRKESESKTNTILDAA 85
+I R+ R +S N I DA+
Sbjct: 329 QIVGRIERSVDDSHLNAIEDAS 350
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 206 (77.6 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 48/133 (36%), Positives = 74/133 (55%)
Query: 500 DYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYG 559
+ IEA + + + P G +L+FL G + + E L+ ++ P++
Sbjct: 822 ELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHS 881
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+P GMESL
Sbjct: 882 SLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESL 941
Query: 620 LVNPISKASANQR 632
+S+A+A QR
Sbjct: 942 EDTFVSRANALQR 954
Score = 193 (73.0 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 65/217 (29%), Positives = 103/217 (47%)
Query: 247 KKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKK--QQYDDY-QYVFEIEDKIVDFF 303
K+ L + +E + E + QQ + Y + KK ++YD + + + KI F
Sbjct: 459 KQQLPEIQKEEVAEEEEEDEPQQVIVENESYVNLKKKLSRKYDVHSKSTYNENVKICMQF 518
Query: 304 RESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIP 363
R K + + ML E +K LP + RE +L ++ + VLV+ G TG GKTTQIP
Sbjct: 519 RL------KKSSRRFQSMLHERQK-LPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIP 571
Query: 364 QYLYEAGYTKQ----GKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDK 419
Q++ +A I CTQ +E ++G VGY IR E S
Sbjct: 572 QFILDASLQGSPNAVANIICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSA 631
Query: 420 TVLKYMTDGMLLREIVLEPSLESYS-VLIDLINYRPD 455
T L Y T G+LLR + + +L+ + V++D ++ R +
Sbjct: 632 TRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTE 668
Score = 126 (49.4 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ RPDL++++ SATL+AE FS YF S PI IP R + V+ F+
Sbjct: 676 VLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFF 724
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 263 (97.6 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 55/128 (42%), Positives = 82/128 (64%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKI-GCT 380
+QEER LPI + +++AV+E+P++++ GETGSGKTTQ+PQ+LYEAGY+ + I G T
Sbjct: 241 MQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVT 300
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEV-GYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPS 439
+ +EM L H V Y IR+E +++T +K+MTDG+LL+EI +
Sbjct: 301 EPRRVAAVAMSQRVAKEMN--LSHRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 358
Query: 440 LESYSVLI 447
L Y V+I
Sbjct: 359 LLKYKVVI 366
Score = 208 (78.3 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + P+Y L E QA++F+P PEG R V+ATN+AETSLTI GIKYV+D G K + Y+
Sbjct: 581 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYD 640
Query: 612 PKTGMESLLVNPISKASANQR 632
TG+ S V +S+ASA+QR
Sbjct: 641 RVTGVSSFRVTWVSQASADQR 661
Score = 115 (45.5 bits), Expect = 3.8e-19, Sum P(3) = 3.8e-19
Identities = 41/128 (32%), Positives = 60/128 (46%)
Query: 410 IRFEDCTSDKTVLKY---MTDGMLLREIVLEPSLESYSVLIDLINYRP-DLKLLISSATL 465
+ ++ D +LKY + D R + + L S ++ L R LKLLI SATL
Sbjct: 348 VLLKEIQKDFLLLKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATL 407
Query: 466 DAENFSD----YFGSAPIFKIPRRRYHVELFYTK-APEADYIEAAIVTALQIHVNEPIGD 520
E+F+ + P+ K+ R++ V + + K P DY +IH P G
Sbjct: 408 RVEDFTQNQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGG 467
Query: 521 ILVFLTGQ 528
ILVFLTGQ
Sbjct: 468 ILVFLTGQ 475
Score = 39 (18.8 bits), Expect = 3.8e-19, Sum P(3) = 3.8e-19
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 304 RESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPV 347
R+ + ++ ++ LE Q+E+K+ R ELLQ +SE V
Sbjct: 68 RKPLTKKERKVLQKVLE--QKEKKSQ-----RAELLQKLSEVQV 104
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 309 (113.8 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 83/198 (41%), Positives = 112/198 (56%)
Query: 444 SVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPE----- 498
++L L++ R DL+L+I SAT DA+ S YF S I + R + VE+ Y+ +
Sbjct: 441 ALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEENSV 500
Query: 499 ----ADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELII 554
A Y+ + A++IH E G IL FLT Q + E A E R + T A I
Sbjct: 501 VGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACE------RFI-TPSA--IA 551
Query: 555 CPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKT 614
P++G L E Q ++F+ P G RKV+ ATNIAETSLTI G+KYVID G K Y P+T
Sbjct: 552 LPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRT 610
Query: 615 GMESLLVNPISKASANQR 632
GM L V +S++SA QR
Sbjct: 611 GMSILKVCRVSQSSARQR 628
Score = 161 (61.7 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LPIY +R ++L+ + ++V++GETGSGK+TQ+ Q+L ++G I CTQ
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 389 XXXXXXXQEM-GVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS-VL 446
+E G + V + F + + YMTD LL+ + + SL S V+
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 447 ID 448
ID
Sbjct: 426 ID 427
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 212 (79.7 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 74/254 (29%), Positives = 124/254 (48%)
Query: 217 EEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQ--RKKAD 274
++ KDR ++ E+ E Q G C + +L+ V +E ++ S +Q K D
Sbjct: 36 QQKKDRGENAESK-EPQIRLG---CNVSAPSGVLERV-KELMEDYSRAPSRQNVDDKNVD 90
Query: 275 LKYGSKNKKQQYDDYQ-YVFEIEDKIVDFF--------RESVELPDKSAVKSALEMLQEE 325
K+ + + +++ +V E +++ D R +EL + ++A + L E
Sbjct: 91 AKFQQQFRHLLSVNFEEFVAETKERNADLDWVNPKLDERLQLELGQRQLEENAKKRL-EA 149
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE----AGYTKQGKIGCTQ 381
RK LP + ++++QAV E V++IVG TG GKTTQ+PQ L + G +I CTQ
Sbjct: 150 RKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQ 209
Query: 382 LXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLREIVLEPSL 440
E LG+ VGY IR E + ++ + Y T G+LL+++ +P +
Sbjct: 210 PRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLM 269
Query: 441 ESYSVLI-DLINYR 453
+ SVLI D I+ R
Sbjct: 270 HNLSVLILDEIHER 283
Score = 190 (71.9 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 48/142 (33%), Positives = 79/142 (55%)
Query: 495 KAPEADYIEAA-IVTALQIHV--NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAE 551
+ PE++ E + L ++ NEP G ILVFL G D+ IL + G + +
Sbjct: 396 RLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRD 455
Query: 552 -LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSY 610
+ + P++ + + Q +F P G RKV+++T IAETS+TID + YVI+ G K +Y
Sbjct: 456 HMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNY 515
Query: 611 NPKTGMESLLVNPISKASANQR 632
+ +T ++SL ++KA+ QR
Sbjct: 516 DIETNIQSLDEVWVTKANTQQR 537
Score = 105 (42.0 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 23/69 (33%), Positives = 45/69 (65%)
Query: 429 MLLREIVLEPSLESYSVLIDLIN----YRPDLKLLISSATLDAENFSDYFGSAPIFKIPR 484
+L+ + + E S+E+ +L+ L+ +RPDLK+++ SAT+ ++F DYF + P+F+I
Sbjct: 274 VLILDEIHERSVET-DLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEG 332
Query: 485 RRYHVELFY 493
+ V++ Y
Sbjct: 333 VMFPVKMLY 341
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 208 (78.3 bits), Expect = 2.9e-34, Sum P(4) = 2.9e-34
Identities = 51/141 (36%), Positives = 75/141 (53%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK----- 376
+QE+R+ LP + RE +L+ + + VLVI G TG GKTTQIPQ++ + + + G+
Sbjct: 575 MQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILD-NFLQTGRPDRVA 633
Query: 377 -IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
I CTQ QE LGH GY IR E S T L + T G+LLR +
Sbjct: 634 NIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLE 693
Query: 436 LEPSLESYS-VLIDLINYRPD 455
+P L + V++D ++ R +
Sbjct: 694 GDPELSGVTHVIVDEVHERTE 714
Score = 188 (71.2 bits), Expect = 2.9e-34, Sum P(4) = 2.9e-34
Identities = 45/133 (33%), Positives = 71/133 (53%)
Query: 500 DYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYG 559
D +E+ + + + P G +LVFL G + + E L+ + ++ P++
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHS 931
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
+L E Q +F G K++++TNIAETS+TID + YVID G K K Y+ MESL
Sbjct: 932 SLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESL 991
Query: 620 LVNPISKASANQR 632
+S+A+A QR
Sbjct: 992 EDVWVSRANALQR 1004
Score = 119 (46.9 bits), Expect = 2.9e-34, Sum P(4) = 2.9e-34
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL DLI R DLK+++ SATL+AE FS YF + P IP R + VE F+
Sbjct: 722 VLKDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFF 770
Score = 41 (19.5 bits), Expect = 2.9e-34, Sum P(4) = 2.9e-34
Identities = 20/87 (22%), Positives = 36/87 (41%)
Query: 182 EEYDAIQRSRKDDGIENLREVSRQKY--LPKRAQKKLEEIKDRTKDKENL-----FEGQK 234
E+ D +Q D+ E V + Y L KR KK E I+ +EN F+ ++
Sbjct: 509 EDIDDVQDEGDDEDEEECIPVENESYVNLRKRMVKKTE-IRTEQMQEENKKLCREFKRKR 567
Query: 235 LTGAELCELDYEKKILDLVGQEGLQRC 261
+ + + +K+ +E + C
Sbjct: 568 SSRRYISMQEQRQKLPAWQKREAILEC 594
Score = 38 (18.4 bits), Expect = 5.9e-34, Sum P(4) = 5.9e-34
Identities = 23/117 (19%), Positives = 47/117 (40%)
Query: 175 GPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQK 234
GP ++K R G + R R LP++ EE + R + ++ QK
Sbjct: 54 GPSRSFKPPSSRGSRGGGVRGAQGGRGRGRSLGLPRKHDDD-EEKRSRFRSEQVPLPLQK 112
Query: 235 LTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQY 291
+ + E K L +E L+ ++ + +D + G + + ++YD+ +
Sbjct: 113 I------HMTSENK---LQVKELLRELQNQEYQTPNSGSDYEGGEEEEDEEYDELDH 160
Score = 38 (18.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 466 DAENFSDYFGSAPIFKIPRRR 486
D ++FS FG + FK P R
Sbjct: 45 DGDDFSLDFGPSRSFKPPSSR 65
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 219 (82.2 bits), Expect = 3.3e-34, Sum P(3) = 3.3e-34
Identities = 54/153 (35%), Positives = 89/153 (58%)
Query: 483 PRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEILK 539
P R H E + ++ + ++ +VT L +H++ EP G IL FL G + + ++ L+
Sbjct: 664 PHRHRHHE--WPRSEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQ 720
Query: 540 QRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYV 599
+ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+T++ I +V
Sbjct: 721 E---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHV 777
Query: 600 IDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+D G K + Y+ KT + L +S+A+ QR
Sbjct: 778 VDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 810
Score = 194 (73.4 bits), Expect = 3.3e-34, Sum P(3) = 3.3e-34
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 515
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 576 PSLEGVSHVIVDEVHER 592
Score = 95 (38.5 bits), Expect = 3.3e-34, Sum P(3) = 3.3e-34
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 602 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 234 (87.4 bits), Expect = 7.7e-34, Sum P(2) = 7.7e-34
Identities = 52/157 (33%), Positives = 87/157 (55%)
Query: 296 EDKIVDFFRESVEL-P-DKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGE 353
E++I+ + E +EL P D S L +ER+ LP++ R ++++ + ++++ G+
Sbjct: 38 EEEIL-MYGEDLELNPFDGLPYSSRYYKLMKERQELPVWKVRCAFMESLLHHQIVIVSGD 96
Query: 354 TGSGKTTQIPQYLYE---AGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSI 410
+GK++Q+PQ+ E A + G C+Q EM V +GHEVGY +
Sbjct: 97 AKTGKSSQVPQWCAEHCLAAGCRHGAAVCSQAHGQVAVRLALRAADEMDVNIGHEVGYFV 156
Query: 411 RFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI 447
FE C + +T+L+Y TD ML RE++ P L SY V+I
Sbjct: 157 PFESCCTAETILRYCTDDMLQREMMSAPLLNSYGVII 193
Score = 217 (81.4 bits), Expect = 7.7e-34, Sum P(2) = 7.7e-34
Identities = 55/191 (28%), Positives = 99/191 (51%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL ++ RP L+L+I +A + D+ GS P+ ++ + E+ YT + D+ +
Sbjct: 210 VLKHVLRARPALRLVILTAPHMSSKLQDFCGSVPLIRV-ENEHQAEVVYTCSMPKDHFLS 268
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIY---GNL 561
A+ ++H + GDI++FL + + A ++++Q + ELI P+Y +L
Sbjct: 269 ALRLLFELHHTKEKGDIVIFLACEQDIDKAYQMIRQEQSNSNPDLGELIPVPLYPTRNDL 328
Query: 562 ---PTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMES 618
P + + K ++ + RKV+L T+ + + I I +VID G + K YNP+ +S
Sbjct: 329 IPKPNQDKQKCYQ---KYRRKVLLTTSSGGSLIRIKNITFVIDVGVERRKVYNPRIRADS 385
Query: 619 LLVNPISKASA 629
+ PISKA A
Sbjct: 386 VTTQPISKAQA 396
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 213 (80.0 bits), Expect = 1.0e-33, Sum P(3) = 1.0e-33
Identities = 55/156 (35%), Positives = 89/156 (57%)
Query: 481 KIPRRRY-HVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEE 536
K+ + +Y H + E ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 601 KLGKHQYLHRHRHHESEDECA-LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQ 658
Query: 537 ILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 596
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+TI+ I
Sbjct: 659 RLQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDI 715
Query: 597 KYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 716 VHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 751
Score = 195 (73.7 bits), Expect = 1.0e-33, Sum P(3) = 1.0e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 401 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 459
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 460 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN 519
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 520 PSLEGVSHVIVDEVHER 536
Score = 95 (38.5 bits), Expect = 1.0e-33, Sum P(3) = 1.0e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 546 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 594
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 213 (80.0 bits), Expect = 1.1e-33, Sum P(3) = 1.1e-33
Identities = 55/156 (35%), Positives = 89/156 (57%)
Query: 481 KIPRRRY-HVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEE 536
K+ + +Y H + E ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 629 KLGKHQYLHRHRHHESEDECA-LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQ 686
Query: 537 ILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 596
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+TI+ I
Sbjct: 687 RLQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDI 743
Query: 597 KYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 744 VHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 779
Score = 195 (73.7 bits), Expect = 1.1e-33, Sum P(3) = 1.1e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN 547
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 548 PSLEGVSHVIVDEVHER 564
Score = 95 (38.5 bits), Expect = 1.1e-33, Sum P(3) = 1.1e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 213 (80.0 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 53/155 (34%), Positives = 90/155 (58%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEI 537
K+ + +Y + ++ + ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 657 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 715
Query: 538 LKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIK 597
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+TI+ I
Sbjct: 716 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIV 772
Query: 598 YVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 773 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 807
Score = 195 (73.7 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 515
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 576 PSLEGVSHVIVDEVHER 592
Score = 95 (38.5 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 602 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 212 (79.7 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 52/155 (33%), Positives = 90/155 (58%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEI 537
K+ + +Y + ++ + ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 629 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 687
Query: 538 LKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIK 597
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+T++ I
Sbjct: 688 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIV 744
Query: 598 YVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 745 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 779
Score = 194 (73.4 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 487
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 548 PSLEGVSHVIVDEVHER 564
Score = 95 (38.5 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 390 (142.3 bits), Expect = 1.9e-33, P = 1.9e-33
Identities = 108/326 (33%), Positives = 161/326 (49%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIP-QYLYEAGYTKQGKIGCTQLXXXX 386
+LP+ ELL A+ P +++ TG+GK+T +P Q L G GKI +
Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGIN--GKIILLEPRRLA 60
Query: 387 XXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVL 446
+ + K G VGY +R ++C T L+ +T+G+L R I +P L ++
Sbjct: 61 ARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLV 120
Query: 447 I-----------DLI---------NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRR 486
I DL R DLKLLI SATLD + AP+ R
Sbjct: 121 ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRS 180
Query: 487 YHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG 546
+ VE Y P + A+ A + + G +L+FL G + + +E L R +G
Sbjct: 181 FPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASR---IG 237
Query: 547 TKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAK 606
+ ++++CP+YG L Q K P P+G RKVVLATNIAETSLTI+GI+ V+D +
Sbjct: 238 S---DVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCAQER 294
Query: 607 VKSYNPKTGMESLLVNPISKASANQR 632
V ++P+TG+ L+ +S+AS QR
Sbjct: 295 VARFDPRTGLTRLITQRVSQASMTQR 320
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 212 (79.7 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 53/155 (34%), Positives = 90/155 (58%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEI 537
K+ + +Y + ++ + ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 655 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 713
Query: 538 LKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIK 597
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+TI+ I
Sbjct: 714 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIV 770
Query: 598 YVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 771 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 805
Score = 194 (73.4 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 513
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 514 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 573
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 574 PSLEGVSHVVVDEVHER 590
Score = 95 (38.5 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 600 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 648
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 212 (79.7 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 52/155 (33%), Positives = 90/155 (58%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEI 537
K+ + +Y + ++ + ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 657 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 715
Query: 538 LKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIK 597
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+T++ I
Sbjct: 716 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIV 772
Query: 598 YVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 773 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 807
Score = 194 (73.4 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 457 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVI 515
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 576 PSLEGVSHVIVDEVHER 592
Score = 95 (38.5 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 602 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 211 (79.3 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 52/155 (33%), Positives = 90/155 (58%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEI 537
K+ + +Y + ++ + ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 629 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 687
Query: 538 LKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIK 597
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+T++ I
Sbjct: 688 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIV 744
Query: 598 YVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 745 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 779
Score = 193 (73.0 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 548 PSLEGVSHVIVDEVHER 564
Score = 95 (38.5 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 211 (79.3 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 52/155 (33%), Positives = 90/155 (58%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEI 537
K+ + +Y + ++ + ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 629 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 687
Query: 538 LKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIK 597
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+T++ I
Sbjct: 688 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIV 744
Query: 598 YVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 745 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 779
Score = 193 (73.0 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 548 PSLEGVSHVIVDEVHER 564
Score = 95 (38.5 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 211 (79.3 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 52/155 (33%), Positives = 90/155 (58%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEI 537
K+ + +Y + ++ + ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 652 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 710
Query: 538 LKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIK 597
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+T++ I
Sbjct: 711 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIV 767
Query: 598 YVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 768 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 802
Score = 193 (73.0 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 452 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 510
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 511 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 570
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 571 PSLEGVSHVIVDEVHER 587
Score = 95 (38.5 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 597 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 645
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 211 (79.3 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 52/155 (33%), Positives = 90/155 (58%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEI 537
K+ + +Y + ++ + ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 657 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 715
Query: 538 LKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIK 597
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+T++ I
Sbjct: 716 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIV 772
Query: 598 YVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 773 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 807
Score = 193 (73.0 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 457 QEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 515
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 516 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 575
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 576 PSLEGVSHVIVDEVHER 592
Score = 95 (38.5 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 602 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 210 (79.0 bits), Expect = 3.8e-33, Sum P(3) = 3.8e-33
Identities = 55/156 (35%), Positives = 88/156 (56%)
Query: 481 KIPRRRY-HVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEE 536
K+ + +Y H + E ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 629 KLGKHQYLHRHRHHESEDECA-LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQ 686
Query: 537 ILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGI 596
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS TI+ I
Sbjct: 687 RLQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDI 743
Query: 597 KYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 744 VHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 779
Score = 193 (73.0 bits), Expect = 3.8e-33, Sum P(3) = 3.8e-33
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 429 QEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 487
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 488 ITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 547
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 548 PSLEGVSHVIVDEVHER 564
Score = 95 (38.5 bits), Expect = 3.8e-33, Sum P(3) = 3.8e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 574 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 202 (76.2 bits), Expect = 4.8e-33, Sum P(3) = 4.8e-33
Identities = 50/133 (37%), Positives = 75/133 (56%)
Query: 500 DYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYG 559
+ IEA + + + P G ILVFL G + + E L+ + + +I P++
Sbjct: 834 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 893
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL
Sbjct: 894 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 953
Query: 620 LVNPISKASANQR 632
+S+A+A QR
Sbjct: 954 EDTFVSQANALQR 966
Score = 195 (73.7 bits), Expect = 4.8e-33, Sum P(3) = 4.8e-33
Identities = 50/149 (33%), Positives = 79/149 (53%)
Query: 312 KSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGY 371
K A + +LQE R+ LP + RE +L+ +S++ V+VI G TG GKTTQIPQ++ +
Sbjct: 532 KQASRQFHAILQE-RQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSL 590
Query: 372 T----KQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 427
+ I CTQ +E ++G VGY IR E S T L Y T
Sbjct: 591 NGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTT 650
Query: 428 GMLLREIVLEPSLESYS-VLIDLINYRPD 455
G+LLR + + +L+ + +++D ++ R +
Sbjct: 651 GVLLRRLEGDATLQGVTHIIVDEVHERTE 679
Score = 103 (41.3 bits), Expect = 4.8e-33, Sum P(3) = 4.8e-33
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ R L++++ SATLDA FS YF P+ IP R + V+ F+
Sbjct: 687 VLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 735
Score = 39 (18.8 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 199 LREVSRQKYLPKRAQKKLEEIKDRTKD-----KENL--FEG-QKLTGAELCELDYEKKIL 250
L EV L Q + E +KD D K+ L ++G K + +D+EK L
Sbjct: 774 LEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQLLVRYKGVSKSVIKTMSVMDFEKVNL 833
Query: 251 DLV 253
+L+
Sbjct: 834 ELI 836
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 216 (81.1 bits), Expect = 6.1e-33, Sum P(3) = 6.1e-33
Identities = 49/133 (36%), Positives = 81/133 (60%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG---KIGCTQL 382
R++LP++ +EE+++ + E V++IVGETGSGKTTQIPQ+L + + K G +I CTQ
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 248
Query: 383 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL-EPSLE 441
E ++G +GY IR E S KT+L + T+G+LLR ++ + +L
Sbjct: 249 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 308
Query: 442 SYS-VLIDLINYR 453
+ + V++D ++ R
Sbjct: 309 TVTHVIVDEVHER 321
Score = 170 (64.9 bits), Expect = 6.1e-33, Sum P(3) = 6.1e-33
Identities = 39/114 (34%), Positives = 63/114 (55%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G +L+FL G D+ + + + + ++ N+ T Q K+ + P G R
Sbjct: 623 GAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 682
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K++L+TNIAETS+T++ + +VID G K KS++ + L + ISKASA QR
Sbjct: 683 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQR 736
Score = 101 (40.6 bits), Expect = 6.1e-33, Sum P(3) = 6.1e-33
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 446 LIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELF 492
L DL+ P LKL++SSA LD F YFGS P+ I R + V E+F
Sbjct: 332 LRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 379
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 91 DDVIRITASTNKK--RFRKRIGSED 113
+D++R T TNK+ +++K E+
Sbjct: 381 EDILRTTGYTNKEMLKYKKEKQQEE 405
Score = 37 (18.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 293 FEIEDKIVDFFRESVELPDKSAVKSALEMLQEERK 327
FE+++ ++ + +K +K E QEE++
Sbjct: 373 FEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQ 407
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 212 (79.7 bits), Expect = 6.5e-33, Sum P(3) = 6.5e-33
Identities = 53/155 (34%), Positives = 90/155 (58%)
Query: 481 KIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTGQDQFETAEEI 537
K+ + +Y + ++ + ++ +VT L +H++ EP G IL FL G + + ++
Sbjct: 655 KLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQR 713
Query: 538 LKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIK 597
L++ LG ++ +I P++ N+P Q IF+ P G RK+VLATNIAETS+TI+ I
Sbjct: 714 LQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIV 770
Query: 598 YVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+V+D G K + Y+ KT + L +S+A+ QR
Sbjct: 771 HVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR 805
Score = 189 (71.6 bits), Expect = 6.5e-33, Sum P(3) = 6.5e-33
Identities = 48/132 (36%), Positives = 70/132 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IGC--- 379
+E LP+ P R+ +L A+ ++PV+VI G+TG GKTT+IPQ L E Y +G+ C
Sbjct: 455 QEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGARCNVI 513
Query: 380 -TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ E+G L VG+ +R E + L + T G+LLR++
Sbjct: 514 ITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSN 573
Query: 438 PSLESYS-VLID 448
PSLE S V++D
Sbjct: 574 PSLEGVSHVVVD 585
Score = 95 (38.5 bits), Expect = 6.5e-33, Sum P(3) = 6.5e-33
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
+L L P L+L++ SAT D E FS YFG P+ K+P Y V+ Y
Sbjct: 600 LLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 648
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 384 (140.2 bits), Expect = 7.0e-33, P = 7.0e-33
Identities = 92/231 (39%), Positives = 141/231 (61%)
Query: 417 SDKTVLKYMTDGMLLRE---IVLEPSLESYSVLIDLI---------NYRPDLKLLISSAT 464
+D +L+ + LRE IV++ + E +VL DLI RPDL++++ SAT
Sbjct: 180 TDGMLLRELMMNSDLREYSVIVIDEAHER-TVLTDLILGFLKSLIQGPRPDLRIIVMSAT 238
Query: 465 LDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVF 524
L AE FS++F +API + R++ V+ +Y KAP D ++A I +QI+ E +GDIL F
Sbjct: 239 LQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCF 298
Query: 525 LTGQDQFETAEEILKQRTRGLGTKI-AELII-CPIYGNLPTELQAKIFEPTPEGARKVVL 582
L GQ++ + A I+++ + + + LI+ P+Y LP Q+ +F P RKVV
Sbjct: 299 LPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVF 358
Query: 583 ATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
+TNIAETS+TI G+K+V+D G KVK + + G+ +LL PIS+ASA QR+
Sbjct: 359 STNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRS 409
Score = 306 (112.8 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 71/160 (44%), Positives = 98/160 (61%)
Query: 304 RESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIP 363
+E+V L KS +KS L + R+TLP+Y + E++ + PV V++GETGSGK+TQIP
Sbjct: 58 KENV-LTYKS-LKSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIP 115
Query: 364 QYLYEAGYT--KQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTV 421
Q++ E Y K G I TQ QE G KLG +VGYS+RF++ T+ +T
Sbjct: 116 QFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTR 175
Query: 422 LKYMTDGMLLREIVLEPSLESYSVL-IDLINYRPDLKLLI 460
LKY+TDGMLLRE+++ L YSV+ ID + R L LI
Sbjct: 176 LKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLI 215
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 290 (107.1 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 79/198 (39%), Positives = 105/198 (53%)
Query: 444 SVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPE----- 498
++L L++ R DL+L+I SAT DA S Y I + R + VE+ Y+ +
Sbjct: 438 ALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSV 497
Query: 499 ----ADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELII 554
A Y + A++IH E G IL FLT Q + E A E R + L
Sbjct: 498 VGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACE------RFVAPSAIAL-- 549
Query: 555 CPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKT 614
P++G L E Q +F+ P G RKV+ ATNIAETSLTI G+KYVID G K Y P+T
Sbjct: 550 -PLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRT 607
Query: 615 GMESLLVNPISKASANQR 632
GM L V +S++SA QR
Sbjct: 608 GMSILKVCQVSQSSARQR 625
Score = 157 (60.3 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LPIY +R ++L+ + ++V++GETGSGK+TQ+ Q+L ++G I CTQ
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 389 XXXXXXXQEM-GVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS-VL 446
+E G + V + F + + YMTD LL+ + + SL S V+
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 447 ID 448
ID
Sbjct: 423 ID 424
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 202 (76.2 bits), Expect = 1.3e-32, Sum P(4) = 1.3e-32
Identities = 50/133 (37%), Positives = 75/133 (56%)
Query: 500 DYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYG 559
+ IEA + + + P G ILVFL G + + E L+ + + +I P++
Sbjct: 781 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 840
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL
Sbjct: 841 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 900
Query: 620 LVNPISKASANQR 632
+S+A+A QR
Sbjct: 901 EDTFVSQANALQR 913
Score = 195 (73.7 bits), Expect = 1.3e-32, Sum P(4) = 1.3e-32
Identities = 50/149 (33%), Positives = 79/149 (53%)
Query: 312 KSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGY 371
K A + +LQE R+ LP + RE +L+ +S++ V+VI G TG GKTTQIPQ++ +
Sbjct: 479 KQASRQFHAILQE-RQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSL 537
Query: 372 T----KQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 427
+ I CTQ +E ++G VGY IR E S T L Y T
Sbjct: 538 NGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTT 597
Query: 428 GMLLREIVLEPSLESYS-VLIDLINYRPD 455
G+LLR + + +L+ + +++D ++ R +
Sbjct: 598 GVLLRRLEGDATLQGVTHIIVDEVHERTE 626
Score = 103 (41.3 bits), Expect = 1.3e-32, Sum P(4) = 1.3e-32
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ R L++++ SATLDA FS YF P+ IP R + V+ F+
Sbjct: 634 VLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 682
Score = 39 (18.8 bits), Expect = 1.3e-32, Sum P(4) = 1.3e-32
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 87 YDADDDVIRITASTNKKRFRKRIGSEDDD-DEGIA 120
+D DD T S R R G E++D EG A
Sbjct: 62 WDDGDDFCVFTESKRPSR-RGSSGEEEEDAPEGAA 95
Score = 39 (18.8 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 199 LREVSRQKYLPKRAQKKLEEIKDRTKD-----KENL--FEG-QKLTGAELCELDYEKKIL 250
L EV L Q + E +KD D K+ L ++G K + +D+EK L
Sbjct: 721 LEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQLLVRYKGVSKSVIKTMSVMDFEKVNL 780
Query: 251 DLV 253
+L+
Sbjct: 781 ELI 783
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 216 (81.1 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 49/133 (36%), Positives = 81/133 (60%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG---KIGCTQL 382
R++LP++ +EE+++ + E V++IVGETGSGKTTQIPQ+L + + K G +I CTQ
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 383 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL-EPSLE 441
E ++G +GY IR E S KT+L + T+G+LLR ++ + +L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 442 SYS-VLIDLINYR 453
+ + V++D ++ R
Sbjct: 308 TVTHVIVDEVHER 320
Score = 171 (65.3 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 40/114 (35%), Positives = 63/114 (55%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G IL+FL G D+ + + + + ++ N+ T Q K+ + P G R
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 681
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K++L+TNIAETS+T++ + +VID G K KS++ + L + ISKASA QR
Sbjct: 682 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQR 735
Score = 101 (40.6 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 446 LIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELF 492
L DL+ P LKL++SSA LD F YFGS P+ I R + V E+F
Sbjct: 331 LRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 378
Score = 39 (18.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 91 DDVIRITASTNKK--RFRKRIGSED 113
+D++R T TNK+ +++K E+
Sbjct: 380 EDILRTTGYTNKEMLKYKKEKQREE 404
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 247 (92.0 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 69/219 (31%), Positives = 110/219 (50%)
Query: 279 SKNKKQQYDDYQYVFEIEDKIVDFFRES--VELPDKSAVK-SALEMLQEERKTLPIYPFR 335
SK+ + D + + E D++ FR V L + K + L++ ++ LPI FR
Sbjct: 93 SKHLALRLDADELLQEARDQMQSQFRHILLVYLDFRQTEKFQRIRKLRQTQRNLPIARFR 152
Query: 336 EELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXXXXXXXXX 395
++L +A+ V+++ G+TG GK+TQ+PQYLY+ GY I CTQ
Sbjct: 153 KDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS---IACTQPRRLACVSLCKRVA 209
Query: 396 QEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI-D------ 448
E+ G V + IRFE + T + ++T+G+LLR++ + +L+ Y LI D
Sbjct: 210 HELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALILDEIHERN 269
Query: 449 ------------LINYRPDLKLLISSATLDAENFSDYFG 475
L+ RP LKL++ SAT++ E F YFG
Sbjct: 270 LFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFG 308
Score = 194 (73.4 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 42/134 (31%), Positives = 79/134 (58%)
Query: 499 ADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIY 558
A +++ + Q +E GD+L+F++G ++ E+ E + + T+ ++ P++
Sbjct: 354 APFVQVLSLIDQQYPTSER-GDVLIFVSGVNEIESVVEAVHE----YATEQTHWLVLPLH 408
Query: 559 GNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMES 618
Q+K+F+ PEG RK +++TNIAETSLT+DG+++V+D G K +++ +
Sbjct: 409 SGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQR 468
Query: 619 LLVNPISKASANQR 632
L +SK+SA+QR
Sbjct: 469 LKEFWVSKSSADQR 482
Score = 37 (18.1 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 493 YTKAPEADYIEAAIVTALQIH 513
+ +APE + IE I+ AL+ H
Sbjct: 539 FIEAPETERIEQTIL-ALKQH 558
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 194 (73.4 bits), Expect = 2.8e-32, Sum P(3) = 2.8e-32
Identities = 52/138 (37%), Positives = 76/138 (55%)
Query: 498 EADYIEAAIVTALQIHV---NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELII 554
E+D + ++ AL +H+ N P G ILVFL G + + L Q T G ++ I
Sbjct: 632 ESD-VSFELLEALLMHIKSKNIP-GAILVFLPGWNLIFALMKFL-QNTNIFGDT-SQYQI 687
Query: 555 CPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKT 614
P + +P + Q K+FEP PEG K++L+TNIAETS+TID I +VID A++K +
Sbjct: 688 LPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHN 747
Query: 615 GMESLLVNPISKASANQR 632
+ S SK + QR
Sbjct: 748 NLTSYATVWASKTNLEQR 765
Score = 182 (69.1 bits), Expect = 2.8e-32, Sum P(3) = 2.8e-32
Identities = 55/165 (33%), Positives = 81/165 (49%)
Query: 295 IEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGET 354
I+D +D+ R L D+ + E R+ LPI R E+L A+++ PV++I G T
Sbjct: 353 IDDLSMDYERS---LRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNT 409
Query: 355 GSGKTTQIPQYLYE----AGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSI 410
G GKTTQI QY+ + +G I TQ +E +LG VGYS+
Sbjct: 410 GCGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSV 469
Query: 411 RFEDC-TSDKTVLKYMTDGMLLREIVLEPSLESYS-VLIDLINYR 453
RFE + + T G+LLR+ LE L S +++D I+ R
Sbjct: 470 RFESVFPRPYGAILFCTVGVLLRK--LEAGLRGVSHIIVDEIHER 512
Score = 116 (45.9 bits), Expect = 2.8e-32, Sum P(3) = 2.8e-32
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTK--APEADYI 502
+L D+++ PDL +++ SAT+D FS YFG P+ ++P R + V+ F+ + D++
Sbjct: 522 ILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFV 581
Query: 503 EAA 505
+A
Sbjct: 582 PSA 584
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 200 (75.5 bits), Expect = 3.3e-32, Sum P(4) = 3.3e-32
Identities = 46/116 (39%), Positives = 68/116 (58%)
Query: 517 PIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEG 576
P G +LVFL G + + E L+ + + +I P++ +L +E Q +F P G
Sbjct: 848 PPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMG 907
Query: 577 ARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K++++TNIAETS+TID + YVID G K K Y+ GMESL +S+A+A QR
Sbjct: 908 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQR 963
Score = 195 (73.7 bits), Expect = 3.3e-32, Sum P(4) = 3.3e-32
Identities = 50/149 (33%), Positives = 79/149 (53%)
Query: 312 KSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGY 371
K A + +LQE R+ LP + RE +L+ +S++ V+VI G TG GKTTQIPQ++ +
Sbjct: 529 KQASRQFHAILQE-RQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSL 587
Query: 372 T----KQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 427
+ I CTQ +E ++G VGY IR E S T L Y T
Sbjct: 588 NGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTT 647
Query: 428 GMLLREIVLEPSLESYS-VLIDLINYRPD 455
G+LLR + + +L+ + +++D ++ R +
Sbjct: 648 GVLLRRLEGDATLQGVTHIIVDEVHERTE 676
Score = 103 (41.3 bits), Expect = 3.3e-32, Sum P(4) = 3.3e-32
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ R L++++ SATLDA FS YF P+ IP R + V+ F+
Sbjct: 684 VLKDIVMQRATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVDQFF 732
Score = 38 (18.4 bits), Expect = 3.3e-32, Sum P(4) = 3.3e-32
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 69 VPRKESESKTNTILDAAHYDADDD 92
VP + + ++ H DADDD
Sbjct: 325 VPPHQMIGRAERNVNDPHLDADDD 348
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 216 (81.1 bits), Expect = 5.8e-32, Sum P(3) = 5.8e-32
Identities = 50/133 (37%), Positives = 81/133 (60%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG---KIGCTQL 382
R++LP++ +EE+++ + E V++IVGETGSGKTTQIPQ+L + Y + G +I CTQ
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCY-ENGVPCRIFCTQP 158
Query: 383 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL-EPSLE 441
E K+G VGY IR E S +T+L + T+G+LLR ++ + +L
Sbjct: 159 RRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSALS 218
Query: 442 SYS-VLIDLINYR 453
+ + V++D ++ R
Sbjct: 219 TVTHVIVDEVHER 231
Score = 170 (64.9 bits), Expect = 5.8e-32, Sum P(3) = 5.8e-32
Identities = 41/115 (35%), Positives = 66/115 (57%)
Query: 519 GDILVFLTGQDQF-ETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGA 577
G IL+FL G D+ + I+ R + ++ + ++ N+ T Q + + P G
Sbjct: 533 GAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGI 592
Query: 578 RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
RK++L+TNIAETS+T++ + +VID G K KS++ + + L ISKASA QR
Sbjct: 593 RKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQR 647
Score = 102 (41.0 bits), Expect = 5.8e-32, Sum P(3) = 5.8e-32
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 446 LIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELF 492
L D++ + +LKL+ISSA LDA F YFGS P+ I R + V E+F
Sbjct: 242 LRDILQNQTNLKLIISSAALDANLFIKYFGSCPVIHIQGRPFEVKEMF 289
Score = 38 (18.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 91 DDVIRITASTNKK--RFRKRIGSED 113
+D++R T TNK+ +++K E+
Sbjct: 291 EDILRSTGYTNKEMIKYKKEKQREE 315
Score = 38 (18.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 293 FEIEDKIVDFFRESVELPDKSAVKSALEMLQEERK 327
FE+++ ++ S +K +K E +EE++
Sbjct: 283 FEVKEMFLEDILRSTGYTNKEMIKYKKEKQREEKQ 317
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 216 (81.1 bits), Expect = 7.4e-32, Sum P(3) = 7.4e-32
Identities = 49/133 (36%), Positives = 81/133 (60%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG---KIGCTQL 382
R++LP++ +EE+++ + E V++IVGETGSGKTTQIPQ+L + + K G +I CTQ
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 383 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL-EPSLE 441
E ++G +GY IR E S KT+L + T+G+LLR ++ + +L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 442 SYS-VLIDLINYR 453
+ + V++D ++ R
Sbjct: 308 TVTHVIVDEVHER 320
Score = 171 (65.3 bits), Expect = 7.4e-32, Sum P(3) = 7.4e-32
Identities = 40/114 (35%), Positives = 63/114 (55%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G IL+FL G D+ + + + + ++ N+ T Q K+ + P G R
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 681
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K++L+TNIAETS+T++ + +VID G K KS++ + L + ISKASA QR
Sbjct: 682 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQR 735
Score = 101 (40.6 bits), Expect = 7.4e-32, Sum P(3) = 7.4e-32
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 446 LIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELF 492
L DL+ P LKL++SSA LD F YFGS P+ I R + V E+F
Sbjct: 331 LRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 378
Score = 39 (18.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 91 DDVIRITASTNKK--RFRKRIGSED 113
+D++R T TNK+ +++K E+
Sbjct: 380 EDILRTTGYTNKEMLKYKKEKQREE 404
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 216 (81.1 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 49/133 (36%), Positives = 81/133 (60%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG---KIGCTQL 382
R++LP++ +EE+++ + E V++IVGETGSGKTTQIPQ+L + + K G +I CTQ
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 263
Query: 383 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL-EPSLE 441
E ++G +GY IR E S KT+L + T+G+LLR ++ + +L
Sbjct: 264 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 323
Query: 442 SYS-VLIDLINYR 453
+ + V++D ++ R
Sbjct: 324 TVTHVIVDEVHER 336
Score = 171 (65.3 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 40/114 (35%), Positives = 63/114 (55%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G IL+FL G D+ + + + + ++ N+ T Q K+ + P G R
Sbjct: 638 GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 697
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K++L+TNIAETS+T++ + +VID G K KS++ + L + ISKASA QR
Sbjct: 698 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQR 751
Score = 101 (40.6 bits), Expect = 7.8e-32, Sum P(3) = 7.8e-32
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 446 LIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELF 492
L DL+ P LKL++SSA LD F YFGS P+ I R + V E+F
Sbjct: 347 LRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 394
Score = 39 (18.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 91 DDVIRITASTNKK--RFRKRIGSED 113
+D++R T TNK+ +++K E+
Sbjct: 396 EDILRTTGYTNKEMLKYKKEKQREE 420
Score = 37 (18.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 195 GIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILD 251
G N +E+ + K +R +K+ + + +EN F+ + + + E +LD
Sbjct: 403 GYTN-KEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQRAVASVSEEYDLLD 458
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 216 (81.1 bits), Expect = 9.5e-32, Sum P(3) = 9.5e-32
Identities = 49/133 (36%), Positives = 81/133 (60%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG---KIGCTQL 382
R++LP++ +EE+++ + E V++IVGETGSGKTTQIPQ+L + + K G +I CTQ
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 248
Query: 383 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL-EPSLE 441
E ++G +GY IR E S KT+L + T+G+LLR ++ + +L
Sbjct: 249 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 308
Query: 442 SYS-VLIDLINYR 453
+ + V++D ++ R
Sbjct: 309 TVTHVIVDEVHER 321
Score = 170 (64.9 bits), Expect = 9.5e-32, Sum P(3) = 9.5e-32
Identities = 39/114 (34%), Positives = 63/114 (55%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G +L+FL G D+ + + + + ++ N+ T Q K+ + P G R
Sbjct: 623 GAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 682
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K++L+TNIAETS+T++ + +VID G K KS++ + L + ISKASA QR
Sbjct: 683 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQR 736
Score = 101 (40.6 bits), Expect = 9.5e-32, Sum P(3) = 9.5e-32
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 446 LIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELF 492
L DL+ P LKL++SSA LD F YFGS P+ I R + V E+F
Sbjct: 332 LRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 379
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 91 DDVIRITASTNKK--RFRKRIGSED 113
+D++R T TNK+ +++K E+
Sbjct: 381 EDILRTTGYTNKEMLKYKKEKQQEE 405
Score = 37 (18.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 293 FEIEDKIVDFFRESVELPDKSAVKSALEMLQEERK 327
FE+++ ++ + +K +K E QEE++
Sbjct: 373 FEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQ 407
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 366 (133.9 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 102/324 (31%), Positives = 161/324 (49%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LP+ +LL A+ + V+ G+GKTT++P L +A + +I +
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGKRIIMLEPRRLAAT 63
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI- 447
+ +G + G VGY+IRF+ S +T ++ +T+G+L R + +P LE +I
Sbjct: 64 NAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAVIF 123
Query: 448 ----------DLI---------NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYH 488
DL R DL++++ SAT+ A + G AP+ R Y
Sbjct: 124 DEFHERSIHSDLALALCRDVQAGLREDLRIIVMSATMAAAPVAALLGDAPVITSEGRNYP 183
Query: 489 VELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTK 548
V L + + + + +A+ A++I V E GDIL FL G + ++L
Sbjct: 184 VALRHIPPNDRENLPSAVARAVRIAVRECEGDILAFLPGVGEIRRCGQLLADDP----PL 239
Query: 549 IAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVK 608
A L++ P+YG+LP Q + P P G RKVVLAT IAETSLTI+G++ V+D G +
Sbjct: 240 HAPLVV-PLYGDLPFVEQERAILPVP-GRRKVVLATTIAETSLTIEGVRVVVDGGQTRRL 297
Query: 609 SYNPKTGMESLLVNPISKASANQR 632
Y+P +G+ L+ +S ASA QR
Sbjct: 298 RYDPASGLNRLVTERVSAASATQR 321
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 207 (77.9 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 49/134 (36%), Positives = 81/134 (60%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG---KIGCTQL 382
R++LP++ +EE+++ + E V++IVGETGSGKTTQIPQ+L + + K G +I CTQ
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 383 XXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDC-TSDKTVLKYMTDGMLLREIVL-EPSL 440
E ++G +GY IR E S KT+L + T+G+LLR ++ + +L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTL 307
Query: 441 ESYS-VLIDLINYR 453
+ + V++D ++ R
Sbjct: 308 STVTHVIVDEVHER 321
Score = 167 (63.8 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 39/112 (34%), Positives = 62/112 (55%)
Query: 521 ILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKV 580
IL+FL G D+ + + + + ++ N+ T Q K+ + P G RK+
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 581 VLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
+L+TNIAETS+T++ + +VID G K KS++ + L + ISKASA QR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQR 736
Score = 101 (40.6 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 446 LIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELF 492
L DL+ P LKL++SSA LD F YFGS P+ I R + V E+F
Sbjct: 332 LRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 379
Score = 39 (18.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 91 DDVIRITASTNKK--RFRKRIGSED 113
+D++R T TNK+ +++K E+
Sbjct: 381 EDILRTTGYTNKEMLKYKKEKQREE 405
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 211 (79.3 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 50/133 (37%), Positives = 75/133 (56%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGY-TKQG---KIGCTQ 381
RKTLP Y ++ LL+A++ V+V+ GETG GKTTQ+PQY+ E+ +G I CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 382 LXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLE 441
E G ++G VGY +R E T L + T G+LLR ++++ SL+
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 442 SYS-VLIDLINYR 453
+ V++D I+ R
Sbjct: 416 GVTHVVVDEIHER 428
Score = 211 (79.3 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 67/179 (37%), Positives = 98/179 (54%)
Query: 457 KLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIHV-- 514
K LISSA DA +D+ G + R R + + +P D I ++ + H+
Sbjct: 525 KSLISSAVEDALEAADFKG----YNF-RTRDSLSCW---SP--DSIGFNLIENVLCHIVK 574
Query: 515 NEPIGDILVFLTGQDQFETAEEILKQRTR-GLGTKIAELIICPIYGNLPTELQAKIFEPT 573
E G +LVF+TG D + + L+ + G K+ L+ C +G++ + Q IF+
Sbjct: 575 GERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVL-LLAC--HGSMASSEQRLIFDRP 631
Query: 574 PEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
PEG RK+VLATN+AETS+TI+ + YVID G AK SY+ LL + ISKA+A QR
Sbjct: 632 PEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQR 690
Score = 130 (50.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 30/61 (49%), Positives = 38/61 (62%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL DL+ RPDLKL++ SATL+AE FS YFG AP IP Y V + + DY+E
Sbjct: 438 VLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLE----DYLET 493
Query: 505 A 505
+
Sbjct: 494 S 494
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 217 (81.4 bits), Expect = 2.5e-29, Sum P(3) = 2.5e-29
Identities = 60/189 (31%), Positives = 95/189 (50%)
Query: 303 FRESVELPDKSAVKSALEMLQ---EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKT 359
+ E+ ++ + +K A Q +ER++LP + RE +L+ +SE+ VLVI G TG GKT
Sbjct: 511 YAENAKICKQFRIKQASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKT 570
Query: 360 TQIPQYLYEAGYT----KQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDC 415
TQIPQ++ + + K I CTQ +E ++G VGY IR E
Sbjct: 571 TQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESV 630
Query: 416 TSDKTVLKYMTDGMLLREIVLEPSLESYS-VLIDLINYRPD----LKLLISSATLDAENF 470
S T L Y T G+LLR + + SL+ + +++D ++ R + L L++ L N
Sbjct: 631 KSSATRLLYCTTGVLLRRLEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNL 690
Query: 471 SDYFGSAPI 479
SA +
Sbjct: 691 QVILMSATL 699
Score = 204 (76.9 bits), Expect = 2.5e-29, Sum P(3) = 2.5e-29
Identities = 49/133 (36%), Positives = 75/133 (56%)
Query: 500 DYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYG 559
+ IEA + + + P G ILVFL G + + E L+ + + ++ P++
Sbjct: 825 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHS 884
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
+L +E Q +F P G K++++TNIAETS+TID + YVID G K K Y+ GMESL
Sbjct: 885 SLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 944
Query: 620 LVNPISKASANQR 632
+S+A+A QR
Sbjct: 945 EDTFVSQANALQR 957
Score = 123 (48.4 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ RP+L++++ SATL+AE FS+YF S P+ IP R + V+ F+
Sbjct: 679 VLKDIVLQRPNLQVILMSATLNAELFSEYFSSCPVITIPGRTFPVDQFF 727
Score = 43 (20.2 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 9/43 (20%), Positives = 26/43 (60%)
Query: 182 EEYDAIQRSRKDDG---IENLREVSRQKYLPKRAQKKLEEIKD 221
E+ A+ R DG + ++++++++K +R++ EE+++
Sbjct: 729 EDAIAVTRYVLQDGSPYMRSMKQMTKEKLKARRSRTAFEEVEE 771
Score = 42 (19.8 bits), Expect = 2.5e-29, Sum P(3) = 2.5e-29
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 34 SKQALSSADL-ETKLQEFEFSSTTETRAFAQEIFAR-VPRKESESKTNTILDAAHYDADD 91
SKQ S+ ++ ET L+ +F + ++ F VP + + I+D +H +A +
Sbjct: 283 SKQKESTKNIQETTLEICKFYLKGNCKFGSRCKFKHEVPPNQIVGRAERIVDDSHLNAHE 342
Query: 92 D 92
D
Sbjct: 343 D 343
>GENEDB_PFALCIPARUM|MAL13P1.14 [details] [associations]
symbol:MAL13P1.14 "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 209 (78.6 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 49/130 (37%), Positives = 75/130 (57%)
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IG 378
E + + R +LP+ + +EL++AV Y V+ + G+TG GK+TQ+PQ+LYE G+T IG
Sbjct: 449 EHIDKVRASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTSNDYFIG 508
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDK-TVLKYMTDGMLLREIVLE 437
TQ E+ ++ GY IRFE K + +K MT+G+LL+EI+ +
Sbjct: 509 ITQPRKIAVKSICNRLNDELNEEI---CGYQIRFEKSYFLKHSKIKVMTEGILLKEIMSD 565
Query: 438 PSLESYSVLI 447
L YSV+I
Sbjct: 566 FILSKYSVII 575
Score = 145 (56.1 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + +Y LP + Q ++F E R +L+TNIAETSLT+ I+YVID G K K Y+
Sbjct: 882 LKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYS 941
Query: 612 PKTGMESLLVNPISKASANQR 632
+++ ISK SA QR
Sbjct: 942 NLNDYSYYIIDNISKCSAIQR 962
Score = 110 (43.8 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 451 NYRPDL---KLLISSATLDAENF--SDYFGSAPIFKIPRRRYHV-ELFYTKAPEADYIEA 504
N++ D+ K++I SAT++ N + F + IP ++ V + F + P+ DY+E
Sbjct: 606 NFKSDIIPIKIIIMSATINDNNLFQNKIFQNFTTVNIPTQKVQVIDHFLSYTPK-DYVEE 664
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQ 530
A +QIH P G ILVFLT Q++
Sbjct: 665 AKRKIIQIHKKLPQGSILVFLTSQEE 690
Score = 51 (23.0 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 159 ERRIRERDVAATR-KLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLE 217
E I E D+ + K + K + +E D I+ S D + L + PK++
Sbjct: 802 ESNIEESDIEESDVKESDVKESDIKESD-IKESDNDVYDKELHDDDHMDDEPKKSNINTY 860
Query: 218 EIKDRTKDKENLFEGQKLTG 237
E+ + TK K ++++G +G
Sbjct: 861 ELNNNTKKKSSIWKGSDGSG 880
Score = 45 (20.9 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 184 YDAIQRSRKDDGIENLREVSR-QKYLPKRAQ-KKLEEIKDRTKDKENL 229
Y A++ K I+ L+ ++ +K + K+ KK++E K +++NL
Sbjct: 197 YCALENISKKKLIKKLKNKNKHEKEIEKKKLFKKIQEFKLNNTEQKNL 244
Score = 41 (19.5 bits), Expect = 9.5e-12, Sum P(4) = 9.5e-12
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 290 QYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEE 325
Q+++E D+F + P K AVKS L +E
Sbjct: 493 QFLYEYGFTSNDYFI-GITQPRKIAVKSICNRLNDE 527
Score = 39 (18.8 bits), Expect = 1.2e-28, Sum P(4) = 1.2e-28
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 231 EGQKLTGAELCELDYEKKI 249
E KL+ E +L+Y+K+I
Sbjct: 43 EPNKLSNKEKKKLEYQKRI 61
Score = 37 (18.1 bits), Expect = 1.9e-28, Sum P(4) = 1.9e-28
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 12 SDKLISLLGYSQPAVVQYVIGLSK--QALSSADLETKLQEFEFSSTTETRAFAQEIFARV 69
SD +L S+ +++ + +K + + L K+QEF+ ++T + V
Sbjct: 194 SDLYCALENISKKKLIKKLKNKNKHEKEIEKKKLFKKIQEFKLNNTEQKNLMIPFDIKAV 253
Query: 70 PR 71
P+
Sbjct: 254 PK 255
>UNIPROTKB|Q8IET8 [details] [associations]
symbol:MAL13P1.14 "ATP dependent DEAD-box helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 209 (78.6 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 49/130 (37%), Positives = 75/130 (57%)
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-IG 378
E + + R +LP+ + +EL++AV Y V+ + G+TG GK+TQ+PQ+LYE G+T IG
Sbjct: 449 EHIDKVRASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTSNDYFIG 508
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDK-TVLKYMTDGMLLREIVLE 437
TQ E+ ++ GY IRFE K + +K MT+G+LL+EI+ +
Sbjct: 509 ITQPRKIAVKSICNRLNDELNEEI---CGYQIRFEKSYFLKHSKIKVMTEGILLKEIMSD 565
Query: 438 PSLESYSVLI 447
L YSV+I
Sbjct: 566 FILSKYSVII 575
Score = 145 (56.1 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 552 LIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYN 611
L + +Y LP + Q ++F E R +L+TNIAETSLT+ I+YVID G K K Y+
Sbjct: 882 LKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYS 941
Query: 612 PKTGMESLLVNPISKASANQR 632
+++ ISK SA QR
Sbjct: 942 NLNDYSYYIIDNISKCSAIQR 962
Score = 110 (43.8 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 451 NYRPDL---KLLISSATLDAENF--SDYFGSAPIFKIPRRRYHV-ELFYTKAPEADYIEA 504
N++ D+ K++I SAT++ N + F + IP ++ V + F + P+ DY+E
Sbjct: 606 NFKSDIIPIKIIIMSATINDNNLFQNKIFQNFTTVNIPTQKVQVIDHFLSYTPK-DYVEE 664
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQ 530
A +QIH P G ILVFLT Q++
Sbjct: 665 AKRKIIQIHKKLPQGSILVFLTSQEE 690
Score = 51 (23.0 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 159 ERRIRERDVAATR-KLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLE 217
E I E D+ + K + K + +E D I+ S D + L + PK++
Sbjct: 802 ESNIEESDIEESDVKESDVKESDIKESD-IKESDNDVYDKELHDDDHMDDEPKKSNINTY 860
Query: 218 EIKDRTKDKENLFEGQKLTG 237
E+ + TK K ++++G +G
Sbjct: 861 ELNNNTKKKSSIWKGSDGSG 880
Score = 45 (20.9 bits), Expect = 2.9e-29, Sum P(4) = 2.9e-29
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 184 YDAIQRSRKDDGIENLREVSR-QKYLPKRAQ-KKLEEIKDRTKDKENL 229
Y A++ K I+ L+ ++ +K + K+ KK++E K +++NL
Sbjct: 197 YCALENISKKKLIKKLKNKNKHEKEIEKKKLFKKIQEFKLNNTEQKNL 244
Score = 41 (19.5 bits), Expect = 9.5e-12, Sum P(4) = 9.5e-12
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 290 QYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEE 325
Q+++E D+F + P K AVKS L +E
Sbjct: 493 QFLYEYGFTSNDYFI-GITQPRKIAVKSICNRLNDE 527
Score = 39 (18.8 bits), Expect = 1.2e-28, Sum P(4) = 1.2e-28
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 231 EGQKLTGAELCELDYEKKI 249
E KL+ E +L+Y+K+I
Sbjct: 43 EPNKLSNKEKKKLEYQKRI 61
Score = 37 (18.1 bits), Expect = 1.9e-28, Sum P(4) = 1.9e-28
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 12 SDKLISLLGYSQPAVVQYVIGLSK--QALSSADLETKLQEFEFSSTTETRAFAQEIFARV 69
SD +L S+ +++ + +K + + L K+QEF+ ++T + V
Sbjct: 194 SDLYCALENISKKKLIKKLKNKNKHEKEIEKKKLFKKIQEFKLNNTEQKNLMIPFDIKAV 253
Query: 70 PR 71
P+
Sbjct: 254 PK 255
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 233 (87.1 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 56/152 (36%), Positives = 85/152 (55%)
Query: 484 RRRYHVELF-YTKAPEADYIEAAIVTAL--QIHVNEPIGDILVFLTGQDQFETAEEILKQ 540
RRRY + E D ++ ++ AL I + E G ILVFL G D T ++L
Sbjct: 365 RRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMS 424
Query: 541 RTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVI 600
+ K + +I P++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVI
Sbjct: 425 QVM---FKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVI 481
Query: 601 DPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
D G K ++ + + ++ +SKA+A QR
Sbjct: 482 DGGKIKETHFDTQNNISTMSAEWVSKANAKQR 513
Score = 173 (66.0 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 62/226 (27%), Positives = 104/226 (46%)
Query: 261 CSHES-DKQQRKKADL-KYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSA 318
CS D Q++K + K + + + Y D + +++ D + L D K+
Sbjct: 49 CSENKLDIQEKKLINQEKKMFRIRNRSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKKND 108
Query: 319 LEMLQEE--RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK 376
L ++ + R+ LP Y ++EL+ + + V VI GETG GKTTQ+ Q++ + Y ++GK
Sbjct: 109 LRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGK 167
Query: 377 -----IGCTQLXXXXXXXXXXXXXQEMGVKLG--HEVGYSIRFEDCTSDKT-VLKYMTDG 428
I CTQ E G + GY IR + K + Y T G
Sbjct: 168 GSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTG 227
Query: 429 MLLREIVLEPSLESYS-VLIDLINYRPDLKLLISSATLDAENF-SD 472
++L+ + +P L S S +++D I+ R ++ + D NF SD
Sbjct: 228 IILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSD 273
Score = 125 (49.1 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 429 MLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIP 483
++L EI E +L+S +V+ DL+N+R DLK+++ SATL+AE FS+YFG+ P+ IP
Sbjct: 245 IVLDEIH-ERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIP 301
Score = 40 (19.1 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 181 KEEYDAIQRSRKDDGIENLR 200
KEE +AI + R D + LR
Sbjct: 346 KEEKEAIYKERWPDYVRELR 365
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 351 (128.6 bits), Expect = 5.7e-29, P = 5.7e-29
Identities = 102/324 (31%), Positives = 157/324 (48%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LPI +LL ++ P L++ G+GK+T P L +AG GKI +
Sbjct: 4 LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGF-HGKIIMLEPRRLAAR 62
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI- 447
Q++G ++G VGY +R E+ S T L+ +T+G++ R + +P L+ VLI
Sbjct: 63 NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
Query: 448 DLIN-------------------YRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYH 488
D + R DLK+++ SATLD + + A + R +
Sbjct: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182
Query: 489 VELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTK 548
+E+ Y + + A+ ++ + G +L FL G A I Q T L
Sbjct: 183 IEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPG------AASI-NQLTEQLSDL 235
Query: 549 IAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVK 608
+E+ ICP+YG + Q + PT G RKVVLATNIAETSLTI+GI+ V+D G +
Sbjct: 236 ASEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSA 295
Query: 609 SYNPKTGMESLLVNPISKASANQR 632
++ KTG+ L I+++SA QR
Sbjct: 296 RFDLKTGITRLEQVRIAQSSAEQR 319
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 351 (128.6 bits), Expect = 5.7e-29, P = 5.7e-29
Identities = 102/324 (31%), Positives = 157/324 (48%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LPI +LL ++ P L++ G+GK+T P L +AG GKI +
Sbjct: 4 LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGF-HGKIIMLEPRRLAAR 62
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI- 447
Q++G ++G VGY +R E+ S T L+ +T+G++ R + +P L+ VLI
Sbjct: 63 NIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLIF 122
Query: 448 DLIN-------------------YRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYH 488
D + R DLK+++ SATLD + + A + R +
Sbjct: 123 DEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGFP 182
Query: 489 VELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTK 548
+E+ Y + + A+ ++ + G +L FL G A I Q T L
Sbjct: 183 IEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPG------AASI-NQLTEQLSDL 235
Query: 549 IAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVK 608
+E+ ICP+YG + Q + PT G RKVVLATNIAETSLTI+GI+ V+D G +
Sbjct: 236 ASEVEICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSA 295
Query: 609 SYNPKTGMESLLVNPISKASANQR 632
++ KTG+ L I+++SA QR
Sbjct: 296 RFDLKTGITRLEQVRIAQSSAEQR 319
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 207 (77.9 bits), Expect = 6.1e-29, Sum P(2) = 6.1e-29
Identities = 57/187 (30%), Positives = 95/187 (50%)
Query: 276 KY-GSKNKKQQY-DDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYP 333
KY G+K K+ Q+ DD+ +I + + + L + AL+ + + R LPI
Sbjct: 134 KYSGNKGKQGQWKDDFFRKPQISSE--EILEKVASLSSRLKKDKALKEITKLRSKLPITS 191
Query: 334 FREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG---KIGCTQLXXXXXXXX 390
F++ + AV V++I GETG GKTTQ+PQYL + ++ + KI CTQ
Sbjct: 192 FKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSV 251
Query: 391 XXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS----VL 446
E G +G +GY +R + + + + T+G+LLR +V + S+ S S ++
Sbjct: 252 SERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDITHII 311
Query: 447 IDLINYR 453
+D I+ R
Sbjct: 312 VDEIHER 318
Score = 205 (77.2 bits), Expect = 6.1e-29, Sum P(2) = 6.1e-29
Identities = 50/115 (43%), Positives = 69/115 (60%)
Query: 519 GDILVFLTGQDQF-ETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGA 577
G ILVFL G D +T + +L+ K IIC ++ +P Q K+F P G
Sbjct: 552 GAILVFLPGWDDINKTRQRLLENPFFADSAKFD--IIC-LHSMVPAGEQKKVFNRPPPGC 608
Query: 578 RKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
RK+VLATNIAE+++TID + YVID G K KSY+P + +L + +SKA+A QR
Sbjct: 609 RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQR 663
Score = 123 (48.4 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 444 SVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIE 503
+++ DL+ P L+L++ SATLDAE FS YFG P+ ++P Y V Y + ++
Sbjct: 327 AIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLYLE-DVLSILK 385
Query: 504 AAIVTALQIHVNEPIGDILVFLTGQDQFETAEEIL 538
+ L N I D + LT +D+ E I+
Sbjct: 386 SGGDNHLS-STNLSISDHKLDLTDEDKLALDEAII 419
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 233 (87.1 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 56/152 (36%), Positives = 85/152 (55%)
Query: 484 RRRYHVELF-YTKAPEADYIEAAIVTAL--QIHVNEPIGDILVFLTGQDQFETAEEILKQ 540
RRRY + E D ++ ++ AL I + E G ILVFL G D T ++L
Sbjct: 451 RRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMS 510
Query: 541 RTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVI 600
+ K + +I P++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVI
Sbjct: 511 QVM---FKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVI 567
Query: 601 DPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
D G K ++ + + ++ +SKA+A QR
Sbjct: 568 DGGKIKETHFDTQNNISTMSAEWVSKANAKQR 599
Score = 173 (66.0 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 62/226 (27%), Positives = 104/226 (46%)
Query: 261 CSHES-DKQQRKKADL-KYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSA 318
CS D Q++K + K + + + Y D + +++ D + L D K+
Sbjct: 135 CSENKLDIQEKKLINQEKKMFRIRNRSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKKND 194
Query: 319 LEMLQEE--RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK 376
L ++ + R+ LP Y ++EL+ + + V VI GETG GKTTQ+ Q++ + Y ++GK
Sbjct: 195 LRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGK 253
Query: 377 -----IGCTQLXXXXXXXXXXXXXQEMGVKLG--HEVGYSIRFEDCTSDKT-VLKYMTDG 428
I CTQ E G + GY IR + K + Y T G
Sbjct: 254 GSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTG 313
Query: 429 MLLREIVLEPSLESYS-VLIDLINYRPDLKLLISSATLDAENF-SD 472
++L+ + +P L S S +++D I+ R ++ + D NF SD
Sbjct: 314 IILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSD 359
Score = 125 (49.1 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 429 MLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIP 483
++L EI E +L+S +V+ DL+N+R DLK+++ SATL+AE FS+YFG+ P+ IP
Sbjct: 331 IVLDEIH-ERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIP 387
Score = 40 (19.1 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 181 KEEYDAIQRSRKDDGIENLR 200
KEE +AI + R D + LR
Sbjct: 432 KEEKEAIYKERWPDYVRELR 451
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 187 (70.9 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 45/130 (34%), Positives = 73/130 (56%)
Query: 506 IVTALQIHV---NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
++ AL +++ N P G +LVFL G + T ++ L+ G+ +++ P++ +P
Sbjct: 633 LIEALLLYIETLNVP-GAVLVFLPGWNLIYTMQKHLEMNPH-FGSHRYQIL--PLHSQIP 688
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
E Q K+F+P P G K++L+TNIAETS+TI+ + YVID KVK + M +
Sbjct: 689 REEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATV 748
Query: 623 PISKASANQR 632
SK + QR
Sbjct: 749 WASKTNLEQR 758
Score = 183 (69.5 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 47/141 (33%), Positives = 72/141 (51%)
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
L+ + +ER+ LP+ F E+L+A+S+ PV++I G TG GKTTQ+PQ++ +
Sbjct: 375 LQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAE 434
Query: 379 C----TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLRE 433
C TQ E G + G GYS+RFE + + T G+LLR+
Sbjct: 435 CNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 494
Query: 434 IVLEPSLESYS-VLIDLINYR 453
LE + S V++D I+ R
Sbjct: 495 --LEAGIRGISHVIVDEIHER 513
Score = 88 (36.0 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ P++++++ SAT+D F +YF + PI ++ R + V+ ++
Sbjct: 523 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYF 571
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 53 SSTTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRIT-----ASTNKKRFRK 107
S+T +T F E F P E +T + + Y +D I++T KK+ +
Sbjct: 540 SATIDTSMFC-EYFFNCPIIEVYGRTFPVQE---YFLED-CIQMTHFVPPPKDKKKKDKD 594
Query: 108 RIGSEDDD 115
G EDDD
Sbjct: 595 DDGGEDDD 602
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 187 (70.9 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 45/130 (34%), Positives = 73/130 (56%)
Query: 506 IVTALQIHV---NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
++ AL +++ N P G +LVFL G + T ++ L+ G+ +++ P++ +P
Sbjct: 633 LIEALLLYIETLNVP-GAVLVFLPGWNLIYTMQKHLEMNPH-FGSHRYQIL--PLHSQIP 688
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
E Q K+F+P P G K++L+TNIAETS+TI+ + YVID KVK + M +
Sbjct: 689 REEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATV 748
Query: 623 PISKASANQR 632
SK + QR
Sbjct: 749 WASKTNLEQR 758
Score = 183 (69.5 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 47/141 (33%), Positives = 72/141 (51%)
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
L+ + +ER+ LP+ F E+L+A+S+ PV++I G TG GKTTQ+PQ++ +
Sbjct: 375 LQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAE 434
Query: 379 C----TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLRE 433
C TQ E G + G GYS+RFE + + T G+LLR+
Sbjct: 435 CNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 494
Query: 434 IVLEPSLESYS-VLIDLINYR 453
LE + S V++D I+ R
Sbjct: 495 --LEAGIRGISHVIVDEIHER 513
Score = 88 (36.0 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ P++++++ SAT+D F +YF + PI ++ R + V+ ++
Sbjct: 523 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYF 571
Score = 40 (19.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 53 SSTTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRIT-----ASTNKKRFRK 107
S+T +T F E F P E +T + + Y +D I++T KK+ +
Sbjct: 540 SATIDTSMFC-EYFFNCPIIEVYGRTFPVQE---YFLED-CIQMTHFVPPPKDKKKKDKD 594
Query: 108 RIGSEDDD 115
G EDDD
Sbjct: 595 DDGGEDDD 602
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 183 (69.5 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 44/119 (36%), Positives = 66/119 (55%)
Query: 514 VNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPT 573
+N P G +LVFL G + T ++ L+ G +++ P++ +P E Q K+F+P
Sbjct: 639 LNVP-GAVLVFLPGWNLIYTMQKHLEMNPH-FGNHRYQIL--PLHSQIPREEQRKVFDPV 694
Query: 574 PEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
P G KV+L+TNIAETS+TI+ + YVID KVK + M + SK + QR
Sbjct: 695 PAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQR 753
Score = 183 (69.5 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 46/141 (32%), Positives = 72/141 (51%)
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
L+ + +ER+ LP+ F E+L+A+S+ PV+++ G TG GKTTQ+PQ++ +
Sbjct: 374 LQAILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRAAE 433
Query: 379 C----TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLRE 433
C TQ E G + G GYS+RFE + + T G+LLR+
Sbjct: 434 CNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 493
Query: 434 IVLEPSLESYS-VLIDLINYR 453
LE + S V++D I+ R
Sbjct: 494 --LEAGIRGISHVIVDEIHER 512
Score = 92 (37.4 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ P++++++ SAT+D F +YF + PI ++ R Y V+ ++
Sbjct: 522 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 570
Score = 45 (20.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 53 SSTTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRIT-----ASTNKKRFRK 107
S+T +T F E F P E +T + + Y +D I++T KK+ +
Sbjct: 539 SATIDTSMFC-EYFFNCPIIEVYGRTYPVQE---YFLED-CIQMTHFIPPPKDKKKKDKD 593
Query: 108 RIGSEDDD 115
GSEDDD
Sbjct: 594 DDGSEDDD 601
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 352 (129.0 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 97/259 (37%), Positives = 150/259 (57%)
Query: 397 EMGVKLGHEVGYSIRFEDCT-----SDKTVLKYMTDGMLLRE---IVLEPSLESYSVLID 448
E+G +G++V ++ + D T +D +L + + L + I+++ + E S+ ID
Sbjct: 159 ELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHER-SLNID 217
Query: 449 LI-NY-------RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEAD 500
I Y RPDLK++I+SAT+D E FS +F +API ++ R Y VE+ Y D
Sbjct: 218 FILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDD 277
Query: 501 YIEA------AIVTALQIHVNEPIGDILVFLTGQDQF-ETAEEILKQRTRGLGTKIAELI 553
E+ I A+ +E +GDIL+F+ G+ + +TA+ + K+ R T+I
Sbjct: 278 DSESDRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKRNLRD--TEIV--- 332
Query: 554 ICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPK 613
P+Y L Q KIF+P R++VLATN+AETSLT+ GIKYVIDPG A++ Y+ +
Sbjct: 333 --PLYARLSAGEQNKIFQP--HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 388
Query: 614 TGMESLLVNPISKASANQR 632
T ++ L + PIS+ASANQR
Sbjct: 389 TKVQRLPIEPISQASANQR 407
Score = 239 (89.2 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 51/121 (42%), Positives = 73/121 (60%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LP+ R+++ QA++ + V+++ GETGSGKTTQ+P+ E G K G IG TQ
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESY-SVLI 447
+EM +LG VGY +RF D SD+T +K MTDG+LL EI + L Y +++I
Sbjct: 147 SVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIII 206
Query: 448 D 448
D
Sbjct: 207 D 207
Score = 39 (18.8 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 509 ALQIHVNEPIGDILVFLTGQDQ--FETAEEILKQRTRG 544
AL+ HV +GD +V + Q + TA I K R +G
Sbjct: 1147 ALKEHVRAELGDTVVEIAKQVETILTTAYNINK-RLKG 1183
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 352 (129.0 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 97/259 (37%), Positives = 150/259 (57%)
Query: 397 EMGVKLGHEVGYSIRFEDCT-----SDKTVLKYMTDGMLLRE---IVLEPSLESYSVLID 448
E+G +G++V ++ + D T +D +L + + L + I+++ + E S+ ID
Sbjct: 159 ELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHER-SLNID 217
Query: 449 LI-NY-------RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEAD 500
I Y RPDLK++I+SAT+D E FS +F +API ++ R Y VE+ Y D
Sbjct: 218 FILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDD 277
Query: 501 YIEA------AIVTALQIHVNEPIGDILVFLTGQDQF-ETAEEILKQRTRGLGTKIAELI 553
E+ I A+ +E +GDIL+F+ G+ + +TA+ + K+ R T+I
Sbjct: 278 DSESDRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKRNLRD--TEIV--- 332
Query: 554 ICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPK 613
P+Y L Q KIF+P R++VLATN+AETSLT+ GIKYVIDPG A++ Y+ +
Sbjct: 333 --PLYARLSAGEQNKIFQP--HAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 388
Query: 614 TGMESLLVNPISKASANQR 632
T ++ L + PIS+ASANQR
Sbjct: 389 TKVQRLPIEPISQASANQR 407
Score = 239 (89.2 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 51/121 (42%), Positives = 73/121 (60%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LP+ R+++ QA++ + V+++ GETGSGKTTQ+P+ E G K G IG TQ
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESY-SVLI 447
+EM +LG VGY +RF D SD+T +K MTDG+LL EI + L Y +++I
Sbjct: 147 SVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIII 206
Query: 448 D 448
D
Sbjct: 207 D 207
Score = 39 (18.8 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 509 ALQIHVNEPIGDILVFLTGQDQ--FETAEEILKQRTRG 544
AL+ HV +GD +V + Q + TA I K R +G
Sbjct: 1147 ALKEHVRAELGDTVVEIAKQVETILTTAYNINK-RLKG 1183
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 225 (84.3 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 54/143 (37%), Positives = 84/143 (58%)
Query: 493 YTKAPEADYIEAAIVTAL--QIHVNEPIGDILVFLTGQDQF-ETAEEILKQRTRGLGTKI 549
Y + + ++ ++ L +I + G ILVFL G ++ +T E++L R K
Sbjct: 548 YMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKF 607
Query: 550 AELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKS 609
+I+C ++ +P E Q K+F P G RK+VLATNIAE+++TID + YVID G K KS
Sbjct: 608 --IILC-LHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKS 664
Query: 610 YNPKTGMESLLVNPISKASANQR 632
Y+P + +L + +SKA+A QR
Sbjct: 665 YDPYNDVSTLQSSWVSKANAKQR 687
Score = 185 (70.2 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 49/147 (33%), Positives = 78/147 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE-AGYTKQG--KIGCT 380
E R LPI FR+ ++ AV V++I GETG GKTTQ+PQYL + ++K+ KI CT
Sbjct: 212 EARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICT 271
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV---LE 437
Q E G +G VGY +R + ++ + + T+G+LLR ++ +
Sbjct: 272 QPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVN 331
Query: 438 PSLESYS-VLIDLINYRP---DLKLLI 460
S+ + +++D I+ R D L+I
Sbjct: 332 SSVPDITHIIVDEIHERDSYSDFMLMI 358
Score = 127 (49.8 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 429 MLLREIVLEPSLESYSVLI--DLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRR 486
+++ EI S + ++I DL+ P L+L++ SATLDAE FS+YFG P+ ++P
Sbjct: 340 IIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFT 399
Query: 487 YHVELFY 493
Y V F+
Sbjct: 400 YPVRTFF 406
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 210 (79.0 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 51/136 (37%), Positives = 81/136 (59%)
Query: 500 DYIEAAIVTALQIHVNEPI--GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPI 557
D I+ ++ L H+++ G IL+FL G + ++L R G A+ ++ P+
Sbjct: 895 DRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPA-ADWLL-PL 952
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ ++ + Q K+F P+G RKV+ ATNIAETS+TID + YVID G K YNP+ +
Sbjct: 953 HSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLS 1012
Query: 618 SLLVNPISKASANQRT 633
S++ + IS+A+A QRT
Sbjct: 1013 SMVEDWISQANARQRT 1028
Score = 195 (73.7 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 63/216 (29%), Positives = 103/216 (47%)
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEE 325
D + K DL N + + D Y IE + + R+ +K + +ML+
Sbjct: 560 DSYVKDKDDLGVVKSNNRAKRDSY-----IEAECLSLQRKQ---ENKKRTQKYKDMLKT- 610
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE----AGYTKQGKIGCTQ 381
R LPI + +LQ + E VLV+ GETGSGKTTQ+PQ++ + +G+ I CTQ
Sbjct: 611 RTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQ 670
Query: 382 ---LXXXXXXXXXXXXXQEMGVKLGHE-VGYSIRFEDCTSDKTVLKYMTDGMLLREIVLE 437
+ E L VGY +R E SDKT L + T G+LLR++ +
Sbjct: 671 PRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGD 730
Query: 438 PSLESYS-VLIDLINYRP---DLKLLISSATLDAEN 469
+L + +++D ++ R D L+I + ++ ++
Sbjct: 731 RTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQS 766
Score = 77 (32.2 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 434 IVLEPSLESYSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV 489
I+L+ +E S D N LK+++ SAT+DA+ FS YFG P+ R + V
Sbjct: 756 IILKSLIEKQSC--D--NTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPV 807
Score = 51 (23.0 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 15/72 (20%), Positives = 33/72 (45%)
Query: 180 WKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAE 239
W++E D I K G ++++ Y + K +E +D+ ++ +KL E
Sbjct: 206 WEDEVDGIDPRNKVSGPRPFDVIAKEYYSARSDAIKAKEKRDKRGQEQAGLAIRKLK-QE 264
Query: 240 LCELDYEKKILD 251
+ +L + +L+
Sbjct: 265 ISDLGLSEAMLE 276
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 190 (71.9 bits), Expect = 2.9e-28, Sum P(3) = 2.9e-28
Identities = 49/150 (32%), Positives = 81/150 (54%)
Query: 483 PRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRT 542
P + + K + IEA ++ ++ +N P G +LVFL G + T ++ L+ +
Sbjct: 621 PETKLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLIYTMQKHLENNS 677
Query: 543 RGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 602
G+ +++ P++ +P E Q K+F+P P+G KV+L+TNIAETS+TI+ + YVID
Sbjct: 678 H-FGSHRYQIL--PLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDS 734
Query: 603 GFAKVKSYNPKTGMESLLVNPISKASANQR 632
KVK + M + SK + QR
Sbjct: 735 CKQKVKLFTAHNNMTNYATVWASKTNLEQR 764
Score = 178 (67.7 bits), Expect = 2.9e-28, Sum P(3) = 2.9e-28
Identities = 47/141 (33%), Positives = 71/141 (50%)
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
L+ + +ER+ LP+ F E+L+A+S+ V++I G TG GKTTQ+PQY+ +
Sbjct: 381 LQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAE 440
Query: 379 C----TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLRE 433
C TQ E G + G GYS+RFE + + T G+LLR+
Sbjct: 441 CNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 500
Query: 434 IVLEPSLESYS-VLIDLINYR 453
LE + S V++D I+ R
Sbjct: 501 --LEAGIRGISHVIVDEIHER 519
Score = 84 (34.6 bits), Expect = 2.9e-28, Sum P(3) = 2.9e-28
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ P++++++ SAT+D F +YF + PI ++ R + V+ ++
Sbjct: 529 VLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYF 577
Score = 42 (19.8 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 53 SSTTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRITA-----STNKKRFRK 107
S+T +T F E F P E +T + + Y +D I++T KK+ ++
Sbjct: 546 SATIDTTMFC-EYFFNCPIIEVYGRTFPVQE---YFLED-CIQMTQFIPPPKDKKKKDKE 600
Query: 108 RIGSEDDD 115
G EDDD
Sbjct: 601 DDGGEDDD 608
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 187 (70.9 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 50/150 (33%), Positives = 79/150 (52%)
Query: 483 PRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRT 542
P R + K + IEA ++ ++ +N P G +LVFL G + T ++ L+
Sbjct: 618 PETRLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 543 RGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 602
G+ +++ P++ +P E Q K+F+P P G KV+L+TNIAETS+TI+ + YVID
Sbjct: 675 H-FGSHRYQIL--PLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDS 731
Query: 603 GFAKVKSYNPKTGMESLLVNPISKASANQR 632
KVK + M + SK + QR
Sbjct: 732 CKQKVKLFTAHNNMTNYATVWASKTNLEQR 761
Score = 174 (66.3 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 46/141 (32%), Positives = 71/141 (50%)
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
L+ + +ER+ LP+ F E+L+A+S+ V++I G TG GKTTQ+PQ++ +
Sbjct: 378 LQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAE 437
Query: 379 C----TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLRE 433
C TQ E G + G GYS+RFE + + T G+LLR+
Sbjct: 438 CNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 497
Query: 434 IVLEPSLESYS-VLIDLINYR 453
LE + S V++D I+ R
Sbjct: 498 --LEAGIRGISHVIVDEIHER 516
Score = 92 (37.4 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ P++++++ SAT+D F +YF + PI ++ R Y V+ ++
Sbjct: 526 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 574
Score = 41 (19.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 53 SSTTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRIT-----ASTNKKRFRK 107
S+T +T F E F P E +T + + Y +D I++T KK+ +
Sbjct: 543 SATIDTSMFC-EYFFNCPIIEVYGRTYPVQE---YFLED-CIQMTHFVPPPKDKKKKDKD 597
Query: 108 RIGSEDDD 115
G EDDD
Sbjct: 598 DDGGEDDD 605
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 187 (70.9 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 50/150 (33%), Positives = 79/150 (52%)
Query: 483 PRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRT 542
P R + K + IEA ++ ++ +N P G +LVFL G + T ++ L+
Sbjct: 618 PETRLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLIYTMQKHLEMNP 674
Query: 543 RGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 602
G+ +++ P++ +P E Q K+F+P P G KV+L+TNIAETS+TI+ + YVID
Sbjct: 675 H-FGSHRYQIL--PLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDS 731
Query: 603 GFAKVKSYNPKTGMESLLVNPISKASANQR 632
KVK + M + SK + QR
Sbjct: 732 CKQKVKLFTAHNNMTNYATVWASKTNLEQR 761
Score = 174 (66.3 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 46/141 (32%), Positives = 71/141 (50%)
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
L+ + +ER+ LP+ F E+L+A+S+ V++I G TG GKTTQ+PQ++ +
Sbjct: 378 LQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAE 437
Query: 379 C----TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLRE 433
C TQ E G + G GYS+RFE + + T G+LLR+
Sbjct: 438 CNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 497
Query: 434 IVLEPSLESYS-VLIDLINYR 453
LE + S V++D I+ R
Sbjct: 498 --LEAGIRGISHVIVDEIHER 516
Score = 92 (37.4 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ P++++++ SAT+D F +YF + PI ++ R Y V+ ++
Sbjct: 526 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 574
Score = 41 (19.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 53 SSTTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRIT-----ASTNKKRFRK 107
S+T +T F E F P E +T + + Y +D I++T KK+ +
Sbjct: 543 SATIDTSMFC-EYFFNCPIIEVYGRTYPVQE---YFLED-CIQMTHFVPPPKDKKKKDKD 597
Query: 108 RIGSEDDD 115
G EDDD
Sbjct: 598 DDGGEDDD 605
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 207 (77.9 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 49/111 (44%), Positives = 66/111 (59%)
Query: 529 DQFETAEEILKQ------RTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVL 582
++F T + IL + +T + KI + I +Y +LP + Q IFEP P RKV+L
Sbjct: 371 NKFNTDDHILNEICFHFGKTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVIL 430
Query: 583 ATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
+TNIAETS+TI IKYVID G K+K ++ G L V ISK SA QR+
Sbjct: 431 STNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRS 481
Score = 132 (51.5 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 402 LGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI-DLINYR 453
+G+ VGY+IRF++ SDKT +K++TDG+L+REI+ +P L+ Y LI D I+ R
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHER 150
Score = 123 (48.4 bits), Expect = 3.7e-27, Sum P(3) = 3.7e-27
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 410 IRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLID----LINYRPDLKLLISSATL 465
I + +D + KY ++L EI E S+ + VL+ L+ R +K+++ SAT
Sbjct: 125 ILIREIMNDPLLKKYKF--LILDEIH-ERSIRT-DVLLGYTKILLQKRKKIKIILMSATF 180
Query: 466 DAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIH 513
D F+ +F + PI IP + + + ++Y + DYI + + T LQIH
Sbjct: 181 DINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 105 (42.0 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 327 KTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK 376
+ LPI ++ E+ + + + +++I GETG GKTTQ+PQ + E + K+ K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 67 (28.6 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 515 NEPIGDILVFLTGQDQFETAEEILKQRTR 543
++ +GDILVFL GQ++ E +LK++ +
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 40 (19.1 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 10/46 (21%), Positives = 25/46 (54%)
Query: 282 KKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEERK 327
K+++YD+ ++ + + K + + + LP + A + E + +E K
Sbjct: 49 KEKKYDNIKHKNDEKKKRKEKKKMLISLPRRVATITVAERVSKEMK 94
Score = 39 (18.8 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 6/34 (17%), Positives = 21/34 (61%)
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKI 299
DK+++K ++K+ + KK++ + + + + ++
Sbjct: 47 DKKEKKYDNIKHKNDEKKKRKEKKKMLISLPRRV 80
Score = 38 (18.4 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 8/35 (22%), Positives = 20/35 (57%)
Query: 201 EVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKL 235
++ + + K+ +KK + IK + +K+ E +K+
Sbjct: 39 QIINEIFFDKK-EKKYDNIKHKNDEKKKRKEKKKM 72
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 207 (77.9 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 49/111 (44%), Positives = 66/111 (59%)
Query: 529 DQFETAEEILKQ------RTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVL 582
++F T + IL + +T + KI + I +Y +LP + Q IFEP P RKV+L
Sbjct: 371 NKFNTDDHILNEICFHFGKTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVIL 430
Query: 583 ATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQRT 633
+TNIAETS+TI IKYVID G K+K ++ G L V ISK SA QR+
Sbjct: 431 STNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRS 481
Score = 132 (51.5 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 402 LGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI-DLINYR 453
+G+ VGY+IRF++ SDKT +K++TDG+L+REI+ +P L+ Y LI D I+ R
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHER 150
Score = 123 (48.4 bits), Expect = 3.7e-27, Sum P(3) = 3.7e-27
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 410 IRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLID----LINYRPDLKLLISSATL 465
I + +D + KY ++L EI E S+ + VL+ L+ R +K+++ SAT
Sbjct: 125 ILIREIMNDPLLKKYKF--LILDEIH-ERSIRT-DVLLGYTKILLQKRKKIKIILMSATF 180
Query: 466 DAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEAAIVTALQIH 513
D F+ +F + PI IP + + + ++Y + DYI + + T LQIH
Sbjct: 181 DINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 105 (42.0 bits), Expect = 4.3e-28, Sum P(3) = 4.3e-28
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 327 KTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK 376
+ LPI ++ E+ + + + +++I GETG GKTTQ+PQ + E + K+ K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 67 (28.6 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 515 NEPIGDILVFLTGQDQFETAEEILKQRTR 543
++ +GDILVFL GQ++ E +LK++ +
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 40 (19.1 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 10/46 (21%), Positives = 25/46 (54%)
Query: 282 KKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEERK 327
K+++YD+ ++ + + K + + + LP + A + E + +E K
Sbjct: 49 KEKKYDNIKHKNDEKKKRKEKKKMLISLPRRVATITVAERVSKEMK 94
Score = 39 (18.8 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 6/34 (17%), Positives = 21/34 (61%)
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKI 299
DK+++K ++K+ + KK++ + + + + ++
Sbjct: 47 DKKEKKYDNIKHKNDEKKKRKEKKKMLISLPRRV 80
Score = 38 (18.4 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 8/35 (22%), Positives = 20/35 (57%)
Query: 201 EVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKL 235
++ + + K+ +KK + IK + +K+ E +K+
Sbjct: 39 QIINEIFFDKK-EKKYDNIKHKNDEKKKRKEKKKM 72
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 180 (68.4 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 49/150 (32%), Positives = 77/150 (51%)
Query: 483 PRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRT 542
P R + K + IEA ++ ++ +N P G +LVFL G + ++ L+
Sbjct: 620 PETRRSMSQLSEKETPLELIEA-LLKYIET-LNVP-GAVLVFLPGWNLIYAMQKHLEMNP 676
Query: 543 RGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 602
G+ I P++ +P + Q K+F+P P+G KV+L+TNIAETS+TI+ + YVID
Sbjct: 677 H-FGSH--SYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDS 733
Query: 603 GFAKVKSYNPKTGMESLLVNPISKASANQR 632
KVK + M + SK + QR
Sbjct: 734 CKQKVKLFTSHNNMTNYATVWASKTNLEQR 763
Score = 179 (68.1 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 47/136 (34%), Positives = 71/136 (52%)
Query: 325 ERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG-C---- 379
+R++LP+ F EE++ AV PV++I G TG GKTTQ+PQY+ + Y + + C
Sbjct: 386 DRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDE-YIRNDRAAQCNIVV 444
Query: 380 TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLREIVLEP 438
TQ E G ++G GYS+RFE + + T G+LLR+ LE
Sbjct: 445 TQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRK--LES 502
Query: 439 SLESYS-VLIDLINYR 453
+ S V++D I+ R
Sbjct: 503 GIRGISHVIVDEIHER 518
Score = 92 (37.4 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D+I P++++++ SAT+D F +YF + PI ++ R + V+ +Y
Sbjct: 528 VLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYY 576
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 227 (85.0 bits), Expect = 8.5e-28, Sum P(2) = 8.5e-28
Identities = 51/135 (37%), Positives = 78/135 (57%)
Query: 500 DYIEAAIVTALQIHV--NEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPI 557
D ++ ++ AL H+ E G ILVFL G D T ++L + K II P+
Sbjct: 449 DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDRFIIIPL 505
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + +VID G K ++ + +
Sbjct: 506 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNIS 565
Query: 618 SLLVNPISKASANQR 632
++ +SKA+A QR
Sbjct: 566 TMAAEWVSKANAKQR 580
Score = 170 (64.9 bits), Expect = 8.5e-28, Sum P(2) = 8.5e-28
Identities = 62/199 (31%), Positives = 95/199 (47%)
Query: 268 QQRKKADLKYGSKNKKQQYD-DYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALEMLQEE 325
++ +KA +K +K D D +Y+FE D+ D + E L K + +EM Q
Sbjct: 124 EKAEKAPVKRRPILQKTFLDQDVEYLFEKNDQDADLDEQLKEDLRKKKSDPRYIEM-QRF 182
Query: 326 RKTLPIYPFRE--ELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-----IG 378
R+ LP Y R+ EL+ ++ V VI GETG GKTTQ+ Q++ + Y ++GK I
Sbjct: 183 REKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILD-DYIERGKGSTCRIV 241
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYMTDGMLLREIV 435
CTQ E G+ GY IR + K + Y T G++L+ +
Sbjct: 242 CTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQ 301
Query: 436 LEPSLESYS-VLIDLINYR 453
+ L S S V++D I+ R
Sbjct: 302 SDKHLSSISHVVLDEIHER 320
Score = 115 (45.5 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 429 MLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIP 483
++L EI E +L+S S++ DL+N R DLK+++ SATL+AE FS+YF + P+ IP
Sbjct: 312 VVLDEIH-ERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIHIP 368
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 190 (71.9 bits), Expect = 8.5e-28, Sum P(3) = 8.5e-28
Identities = 49/150 (32%), Positives = 81/150 (54%)
Query: 483 PRRRYHVELFYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRT 542
P + + K + IEA ++ ++ +N P G +LVFL G + T ++ L+ +
Sbjct: 620 PETKLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLIYTMQKHLENNS 676
Query: 543 RGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDP 602
G+ +++ P++ +P E Q K+F+P P+G KV+L+TNIAETS+TI+ + YVID
Sbjct: 677 H-FGSHRYQIL--PLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDS 733
Query: 603 GFAKVKSYNPKTGMESLLVNPISKASANQR 632
KVK + M + SK + QR
Sbjct: 734 CKQKVKLFTAHNNMTNYATVWASKTNLEQR 763
Score = 176 (67.0 bits), Expect = 8.5e-28, Sum P(3) = 8.5e-28
Identities = 47/141 (33%), Positives = 70/141 (49%)
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
L+ + +ER+ LP+ F E+L+A+S V++I G TG GKTTQ+PQY+ +
Sbjct: 380 LQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAE 439
Query: 379 C----TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTS-DKTVLKYMTDGMLLRE 433
C TQ E G + G GYS+RFE + + T G+LLR+
Sbjct: 440 CNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 499
Query: 434 IVLEPSLESYS-VLIDLINYR 453
LE + S V++D I+ R
Sbjct: 500 --LEAGIRGISHVIVDEIHER 518
Score = 84 (34.6 bits), Expect = 8.5e-28, Sum P(3) = 8.5e-28
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ P++++++ SAT+D F +YF + PI ++ R + V+ ++
Sbjct: 528 VLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYF 576
Score = 42 (19.8 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 53 SSTTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRITA-----STNKKRFRK 107
S+T +T F E F P E +T + + Y +D I++T KK+ ++
Sbjct: 545 SATIDTTMFC-EYFFNCPIIEVYGRTFPVQE---YFLED-CIQMTQFIPPPKDKKKKDKE 599
Query: 108 RIGSEDDD 115
G EDDD
Sbjct: 600 DDGGEDDD 607
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 200 (75.5 bits), Expect = 9.8e-28, Sum P(2) = 9.8e-28
Identities = 51/180 (28%), Positives = 93/180 (51%)
Query: 455 DLKLLI-SSATLDAENFSDYFGSAPIFKIPRRRYHVEL-FYTKAPEADYIEAAIVTALQI 512
DL++++ + +L+ + D++G P +PR+ Y + AD ++AA L+
Sbjct: 197 DLRVVVVTDPSLEPK-LQDFWGGPPTVCVPRKTGSCPTPVYRDSLPADRVDAACQAVLEW 255
Query: 513 HVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEP 572
E GD+LV+L +++ E L ++ R L + + P++ +QA ++E
Sbjct: 256 CQEEAPGDVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYED 314
Query: 573 TPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
T GARKVV+ +A+ S ++ I++VID G Y+P+ ES ++ P+SK A R
Sbjct: 315 TESGARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEAR 374
Score = 194 (73.4 bits), Expect = 9.8e-28, Sum P(2) = 9.8e-28
Identities = 49/132 (37%), Positives = 71/132 (53%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYP--VLVIVGETGSGKTTQIPQYLYE----AGYTKQG 375
L E+R++LP++ R L+ + P V+++ GE G GK+TQIPQ+ E G+ K G
Sbjct: 38 LLEQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQK-G 96
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
+ TQ EM + LGHEVGYSI EDCT T+L++ D +LL+E+
Sbjct: 97 WVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVA 156
Query: 436 LEPSLESYSVLI 447
+ VLI
Sbjct: 157 STRGTGARGVLI 168
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 203 (76.5 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 49/148 (33%), Positives = 81/148 (54%)
Query: 309 LPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE 368
+P KS K + E LQ+ R +LP + +++L+++S V++I G TG GKTTQ+PQ++ +
Sbjct: 164 IPPKS--KCSKE-LQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILD 220
Query: 369 AGY--TKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMT 426
+ K ++ TQ +E G +G VGY +R + SD TVL Y T
Sbjct: 221 EAHENNKHVRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCT 280
Query: 427 DGMLLREIVLEPSLESYS-VLIDLINYR 453
G+LLR + +P + +++D I+ R
Sbjct: 281 TGVLLRMLTSDPVASGITHIVMDEIHER 308
Score = 197 (74.4 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 53/194 (27%), Positives = 99/194 (51%)
Query: 444 SVLIDLINYRPDLKLLISSATLDAE-NFSDYFGSAPIFKIPRRRYHVELFYTKAPE--AD 500
S L++ ++ +LK + T+ +D K+ R LFY + D
Sbjct: 570 STLLEK-KFKEELKTALPDRTVYYHPQMNDVVDKTDFSKL-RFGEKYNLFYGSSSNNSVD 627
Query: 501 YIEAAIVTALQIHVNEPI-GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYG 559
Y+ + +Q + P+ G ILVFL G + + + + L + +I+ P++
Sbjct: 628 YV--LLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSL-KNMKNVIVLPLHS 684
Query: 560 NLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESL 619
+ + IF+ P+ RK++LATNIAE S+TI+ + +V+D G K KS++ + + +L
Sbjct: 685 QMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTL 744
Query: 620 LVNPISKASANQRT 633
V PI++++A+QR+
Sbjct: 745 TVKPIARSNADQRS 758
Score = 84 (34.6 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 446 LIDLINYRPDLKLLISSATLDA--ENFSDYFG--SAPIFKIPRRRYHVELFY 493
L + + RPDLK+++ SAT++ + FS+YF S + +I R + V++FY
Sbjct: 319 LRECLKMRPDLKVILMSATIEGNMQLFSNYFENHSMDVIRIESRAFDVKVFY 370
Score = 49 (22.3 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 180 WKEEYDAIQRSRKD 193
WK+E +A++R KD
Sbjct: 399 WKDEIEAVEREEKD 412
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 6 NLKTWVSDKLISLLGYSQP 24
++K + D+++++ GY P
Sbjct: 365 DVKVFYLDQILAMTGYQPP 383
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 183 (69.5 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 44/119 (36%), Positives = 67/119 (56%)
Query: 514 VNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPT 573
+N P G +LVFL G + T ++ L+ G+ +++ P++ +P E Q K+F+P
Sbjct: 648 LNVP-GAVLVFLPGWNLIYTMQKHLEMNP-DFGSHRYQIL--PLHSQIPREEQRKVFDPV 703
Query: 574 PEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
P G KV+L+TNIAETS+TI+ + YVID KVK + M + SK + QR
Sbjct: 704 PAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQR 762
Score = 172 (65.6 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 46/141 (32%), Positives = 70/141 (49%)
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
L + +ER+ LP+ F E+L+A+S+ V++I G TG GKTTQ+PQ++ +
Sbjct: 379 LPAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAE 438
Query: 379 C----TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTV-LKYMTDGMLLRE 433
C TQ E G + G GYS+RFE + + T G+LLR+
Sbjct: 439 CNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRK 498
Query: 434 IVLEPSLESYS-VLIDLINYR 453
LE + S V++D I+ R
Sbjct: 499 --LEAGIRGISHVIVDEIHER 517
Score = 92 (37.4 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ P++++++ SAT+D F +YF + PI ++ R Y V+ ++
Sbjct: 527 VLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYF 575
Score = 43 (20.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 53 SSTTETRAFAQEIFARVPRKESESKTNTILDAAHYDADDDVIRIT-----ASTNKKRFRK 107
S+T +T F E F P E +T + + Y +D I++T KK+ ++
Sbjct: 544 SATIDTSMFC-EYFFNCPIIEVYGRTYPVQE---YFLED-CIQMTHFIPPPKDKKKKDKE 598
Query: 108 RIGSEDDD 115
G EDDD
Sbjct: 599 DDGGEDDD 606
>TIGR_CMR|CPS_4302 [details] [associations]
symbol:CPS_4302 "ATP-dependent helicase HrpB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 RefSeq:YP_270952.1
ProteinModelPortal:Q47W70 STRING:Q47W70 DNASU:3518946
GeneID:3518946 KEGG:cps:CPS_4302 PATRIC:21471457
BioCyc:CPSY167879:GI48-4312-MONOMER Uniprot:Q47W70
Length = 845
Score = 338 (124.0 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 107/327 (32%), Positives = 155/327 (47%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LPI +++ Q++ E L++ G+GK+T +P +L KI Q
Sbjct: 9 LPIEAIKQQFCQSLDEQNTLILSAPPGAGKSTCLPLWLLTLPSLANKKIYLLQPRRLAVK 68
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI- 447
++ K+G VGY +R + TS T L+ +T+G+L + I + L ++++
Sbjct: 69 NIATFLAAQLKEKVGETVGYRLRNDSKTSTSTRLEVITEGILTQIIQKDAELLGTALVVF 128
Query: 448 ----------DLI---------NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYH 488
DL R DLK+L+ SATLD E S A + R Y
Sbjct: 129 DEFHERSLQGDLAFALTREVQTELRDDLKILLMSATLDIEYLSQALPDAYLLNSEGRSYP 188
Query: 489 VELFYTKAPEAD--YIEAAIVTALQIHVNEPIGDILVFLTGQDQFE-TAEEILKQRTRGL 545
+E+ Y +AP A + E A+ N IG ILVFL G + ++ Q+ G+
Sbjct: 189 IEVSY-QAPRAHQRWREHALAVIKDKMYNH-IGSILVFLPGVADIRFLLDSLMAQKVEGV 246
Query: 546 GTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFA 605
ICP++G L + Q + P G RK+VLATNIAETSLTIDGI VID G
Sbjct: 247 K-------ICPLFGELSLKEQQQAIAPCLSGHRKIVLATNIAETSLTIDGIDLVIDCGLE 299
Query: 606 KVKSYNPKTGMESLLVNPISKASANQR 632
KV ++ + M L+ ISKASA QR
Sbjct: 300 KVAVFDSASLMNKLMQKQISKASAVQR 326
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 230 (86.0 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 54/152 (35%), Positives = 84/152 (55%)
Query: 484 RRRYHVELF-YTKAPEADYIEAAIVTALQIHV--NEPIGDILVFLTGQDQFETAEEILKQ 540
R+RY + + D ++ ++ AL H+ E G ILVFL G D T ++L
Sbjct: 565 RKRYSASTVDVMEMIDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMS 624
Query: 541 RTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVI 600
+ K +I P++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVI
Sbjct: 625 QVM---FKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVI 681
Query: 601 DPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
D G K ++ + + ++ +SKA+A QR
Sbjct: 682 DGGKIKETHFDTQNNISTMSAEWVSKANAKQR 713
Score = 165 (63.1 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQEE 325
+ Q++K + + + +Y D + +++ D + L D KS L ++ +
Sbjct: 256 ENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVALDQQLLEDLRKKKSDLRYIEMQ 315
Query: 326 --RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-----IG 378
R+ LP Y ++EL+ + + V VI GETG GKTTQ+ Q++ + Y ++GK I
Sbjct: 316 HFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSACRIV 374
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYMTDGMLLREIV 435
CTQ E G+ GY IR + K + Y T G++L+ +
Sbjct: 375 CTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQ 434
Query: 436 LEPSLESYS-VLIDLINYRPDLKLLISSATLDAENF 470
+ L S S +++D I+ R ++ + D NF
Sbjct: 435 SDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNF 470
Score = 135 (52.6 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 34/79 (43%), Positives = 54/79 (68%)
Query: 415 CTSDKTVLKYM-TDGML--LREIVL----EPSLES---YSVLIDLINYRPDLKLLISSAT 464
CT+ +L+++ +D L + IVL E +L+S +V+ DL+N+RPDLK+++ SAT
Sbjct: 424 CTTG-IILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSAT 482
Query: 465 LDAENFSDYFGSAPIFKIP 483
L+AE FS+YFG+ P+ IP
Sbjct: 483 LNAEKFSEYFGNCPMIHIP 501
Score = 41 (19.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 181 KEEYDAIQRSRKDDGIENLRE 201
KEE +AI + R D + LR+
Sbjct: 546 KEEKEAIYKERWPDYVRELRK 566
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 225 (84.3 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 54/152 (35%), Positives = 85/152 (55%)
Query: 484 RRRYHVELF-YTKAPEADYIEAAIVTAL--QIHVNEPIGDILVFLTGQDQFETAEEILKQ 540
R+RY + + + ++ ++ AL I + E G ILVFL G D T ++L
Sbjct: 453 RQRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMS 512
Query: 541 RTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVI 600
+ K + II P++ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVI
Sbjct: 513 QVM---FKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVI 569
Query: 601 DPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
D G K ++ + + ++ +SKA+A QR
Sbjct: 570 DGGKIKETHFDTQNNISTMSAEWVSKANAKQR 601
Score = 168 (64.2 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 59/209 (28%), Positives = 95/209 (45%)
Query: 269 QRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESV---ELPDKSAVKSALEMLQEE 325
+ K +K +K+ + + F I DK +D E + PD + + LE LQ++
Sbjct: 134 ENKPNSVKNVEHQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDATLDQQLLEDLQKK 193
Query: 326 ------------RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTK 373
R+ LP Y ++EL+ + + V VI GETG GKTTQ+ Q++ + Y +
Sbjct: 194 KTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-NYIE 252
Query: 374 QGK-----IGCTQLXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYM 425
+GK I CTQ E G+ GY IR + K + Y
Sbjct: 253 RGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYC 312
Query: 426 TDGMLLREIVLEPSLESYS-VLIDLINYR 453
T G++L+ + +P L S S +++D I+ R
Sbjct: 313 TTGIILQWLQSDPHLSSVSHIVLDEIHER 341
Score = 131 (51.2 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 29/58 (50%), Positives = 44/58 (75%)
Query: 429 MLLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIP 483
++L EI E +L+S +V+ DL++YRPDLK+++ SATL+AE FS+YFG+ P+ IP
Sbjct: 333 IVLDEIH-ERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIP 389
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 225 (84.3 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 51/135 (37%), Positives = 79/135 (58%)
Query: 500 DYIEAAIVTAL--QIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPI 557
D ++ ++ AL I + E G ILVFL G D T ++L + K + +I P+
Sbjct: 461 DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDKFLIIPL 517
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVID G K ++ + +
Sbjct: 518 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 577
Query: 618 SLLVNPISKASANQR 632
++ +SKA+A QR
Sbjct: 578 TMSAEWVSKANAKQR 592
Score = 166 (63.5 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 58/201 (28%), Positives = 93/201 (46%)
Query: 266 DKQQRK--KADLKYGSKNKKQQYD-DYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALEM 321
D Q++K + K K D D +Y+ + + + + +E L K +EM
Sbjct: 134 DNQEKKLLNQEKKTFRITDKSYIDRDSEYLLQENEPNLSLDQHLLEDLQRKKTDPRYIEM 193
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK----- 376
Q RK LP Y ++EL+ ++ + V VI GETG GKTTQ+ Q++ + Y ++GK
Sbjct: 194 -QRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACR 251
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYMTDGMLLRE 433
I CTQ E G+ GY IR + K + Y T G++L+
Sbjct: 252 IVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 311
Query: 434 IVLEPSLESYS-VLIDLINYR 453
+ + L S S +++D I+ R
Sbjct: 312 LQSDSRLSSVSHIVLDEIHER 332
Score = 123 (48.4 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 415 CTSDKTVLKYM-TDGML--LREIVL----EPSLES---YSVLIDLINYRPDLKLLISSAT 464
CT+ +L+++ +D L + IVL E +L+S +V+ DL+++R DLK+++ SAT
Sbjct: 303 CTTG-IILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSAT 361
Query: 465 LDAENFSDYFGSAPIFKIP 483
L+AE FS+YFG+ P+ IP
Sbjct: 362 LNAEKFSEYFGNCPMIHIP 380
Score = 53 (23.7 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 28/128 (21%), Positives = 52/128 (40%)
Query: 150 RDQRGKEELERRIRERDVAATRKLTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLP 209
R +R ++ R RE + K E + +D G EVS +K +
Sbjct: 72 RQERAVVHMDER-REEQIVQLLNSVQAKTDKDSEAQISWFAPEDHGYGT--EVSSEKKI- 127
Query: 210 KRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQ 269
++KKL+ + + ++E + ++T + D E + + + L H + Q
Sbjct: 128 -NSEKKLDNQEKKLLNQEK--KTFRITDKSYIDRDSEYLLQE--NEPNLSLDQHLLEDLQ 182
Query: 270 RKKADLKY 277
RKK D +Y
Sbjct: 183 RKKTDPRY 190
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 208 (78.3 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 51/135 (37%), Positives = 72/135 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTK-QG---KIGC 379
E RKTLP + +E LLQA++ V+V+ GETG GKTTQ+PQY+ E+ +G I C
Sbjct: 255 EFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIIC 314
Query: 380 TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPS 439
TQ E G LG VG+ +R E T L + T G+LLR ++ + +
Sbjct: 315 TQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRN 374
Query: 440 LESYS-VLIDLINYR 453
L + V +D I+ R
Sbjct: 375 LNGVTHVFVDEIHER 389
Score = 193 (73.0 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 51/136 (37%), Positives = 77/136 (56%)
Query: 500 DYIEAAIVTALQIHV--NEPIGDILVFLTGQDQFETAEEILKQRTR-GLGTKIAELIICP 556
D I ++ A+ H+ E G +LVFLTG D + + +K G ++ L++C
Sbjct: 519 DCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVL-LLMC- 576
Query: 557 IYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGM 616
+G++ T Q IFE P RK+VLATN+AE S+TI+ + +V+D G AK +Y+
Sbjct: 577 -HGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNT 635
Query: 617 ESLLVNPISKASANQR 632
LL + IS+ASA QR
Sbjct: 636 PCLLPSWISQASARQR 651
Score = 112 (44.5 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 32/108 (29%), Positives = 61/108 (56%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEADYIEA 504
VL +L+ RPDL+L++ SATL+AE FS+Y+G AP IP + V+ + + D +E
Sbjct: 399 VLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLE----DVLE- 453
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQ-FETAEEILKQRTRGLGTKIAE 551
+T ++ + D GQ++ ++T ++++ ++ + T + E
Sbjct: 454 --ITGYKLTSFNQVDDY-----GQEKTWKTQKQLMPRKRKNQITTLVE 494
Score = 43 (20.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 20/73 (27%), Positives = 29/73 (39%)
Query: 175 GPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFE--- 231
G + TWK + + R RK+ I L E + K E RT+D + +
Sbjct: 469 GQEKTWKTQKQLMPRKRKNQ-ITTLVEEALSK-------SNFESYNSRTRDSLSSWMPDC 520
Query: 232 -GQKLTGAELCEL 243
G L A LC +
Sbjct: 521 IGFNLIEAVLCHI 533
Score = 38 (18.4 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 22/99 (22%), Positives = 42/99 (42%)
Query: 173 LTGPKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEG 232
+ GP T + + SR DG+ L R++++ A E+ D + E FE
Sbjct: 33 IVGPVSTSSPAF--LISSRNGDGVTGLYYPIRRRFIGHTA----EQFSDDEYECE--FEE 84
Query: 233 QKLTGAELCELDYEKKILDLVGQEGLQRCSHESDKQQRK 271
K + + +++ K+ L+ + Q DK+ R+
Sbjct: 85 HKASSSVANVDEWKWKLGILLANDSEQEIVSR-DKRDRR 122
Score = 38 (18.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 447 IDLINYRPDL 456
+ L NYRPDL
Sbjct: 150 VPLPNYRPDL 159
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 224 (83.9 bits), Expect = 6.3e-27, Sum P(2) = 6.3e-27
Identities = 51/135 (37%), Positives = 78/135 (57%)
Query: 500 DYIEAAIVTAL--QIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPI 557
D ++ ++ AL I + E G ILVFL G D T ++L + K +I P+
Sbjct: 460 DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM---FKSDRFLIIPL 516
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
+ +PT Q ++F+ TP G RK+V+ATNIAETS+TID + YVID G K ++ + +
Sbjct: 517 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 576
Query: 618 SLLVNPISKASANQR 632
++ +SKA+A QR
Sbjct: 577 TMSAEWVSKANAKQR 591
Score = 165 (63.1 bits), Expect = 6.3e-27, Sum P(2) = 6.3e-27
Identities = 56/201 (27%), Positives = 95/201 (47%)
Query: 266 DKQQRKKADLK---YGSKNKKQQYDDYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALEM 321
D Q++K + + Y +K D +Y+ + + + ++ +E L K +EM
Sbjct: 133 DNQEKKLLNQEKKTYRITDKSYIDRDSEYLLQQNEPNLGLDQQLLEDLQKKKTDPRYIEM 192
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQG-----K 376
Q RK LP Y ++EL+ ++ + V VI GETG GKTTQ+ Q++ + Y ++G +
Sbjct: 193 -QRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGIGSACR 250
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYMTDGMLLRE 433
I CTQ E G+ GY IR + K + Y T G++L+
Sbjct: 251 IVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQW 310
Query: 434 IVLEPSLESYS-VLIDLINYR 453
+ + L S S +++D I+ R
Sbjct: 311 LQSDSRLSSVSHIVLDEIHER 331
Score = 123 (48.4 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 415 CTSDKTVLKYM-TDGML--LREIVL----EPSLES---YSVLIDLINYRPDLKLLISSAT 464
CT+ +L+++ +D L + IVL E +L+S +V+ DL+++R DLK+++ SAT
Sbjct: 302 CTTG-IILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSAT 360
Query: 465 LDAENFSDYFGSAPIFKIP 483
L+AE FS+YFG+ P+ IP
Sbjct: 361 LNAEKFSEYFGNCPMIHIP 379
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 212 (79.7 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 54/165 (32%), Positives = 95/165 (57%)
Query: 472 DYFGSAPIFKIPRRRY-HVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTG 527
+Y+ + K+ R R+ H E+ ++ + ++ ++T L + ++ EP G IL FL G
Sbjct: 664 EYYLEEILAKLGRHRHRHYEI--KQSDDECVLDLDLITDLVLQIDAHGEP-GGILCFLPG 720
Query: 528 QDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIA 587
+ + ++ L + LG++ + ++ P++ N+P Q IF+ P G RK+VLATNIA
Sbjct: 721 WQEIKGVQQRLLEM---LGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIA 777
Query: 588 ETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
ETS+TI+ I +V+D G K + Y+ KT + L +SK++ QR
Sbjct: 778 ETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQR 822
Score = 188 (71.2 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 48/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-----IG 378
+E LP+ P ++ +L A+ + PV+VI G+TG GKTT+IPQ L E Y +G+ +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ QE+G + VGY +R E + L + T G+LLR++
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 592 PSLEGVSHVVVDEVHER 608
Score = 103 (41.3 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 454 PDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
PDL+L++ SAT D + FS YFG P+ K+P Y V+ +Y
Sbjct: 627 PDLRLVLMSATGDNQRFSHYFGDCPVVKVPGFMYPVKEYY 666
Score = 38 (18.4 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 295 IEDKIVDFFRESVELPDKSAVKSALEMLQEERKTL 329
I D +++ +ES + D K+ + ML+ E L
Sbjct: 423 IADDMMNLSKESGAISDAITGKTYIPMLEAEEVRL 457
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 212 (79.7 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 54/165 (32%), Positives = 95/165 (57%)
Query: 472 DYFGSAPIFKIPRRRY-HVELFYTKAPEADYIEAAIVTALQIHVN---EPIGDILVFLTG 527
+Y+ + K+ R R+ H E+ ++ + ++ ++T L + ++ EP G IL FL G
Sbjct: 664 EYYLEEILAKLGRHRHRHYEI--KQSDDECVLDLDLITDLVLQIDAHGEP-GGILCFLPG 720
Query: 528 QDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGARKVVLATNIA 587
+ + ++ L + LG++ + ++ P++ N+P Q IF+ P G RK+VLATNIA
Sbjct: 721 WQEIKGVQQRLLEM---LGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIA 777
Query: 588 ETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
ETS+TI+ I +V+D G K + Y+ KT + L +SK++ QR
Sbjct: 778 ETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQR 822
Score = 188 (71.2 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 48/137 (35%), Positives = 73/137 (53%)
Query: 324 EERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK-----IG 378
+E LP+ P ++ +L A+ + PV+VI G+TG GKTT+IPQ L E Y +G+ +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKT-VLKYMTDGMLLREIVLE 437
TQ QE+G + VGY +R E + L + T G+LLR++
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 438 PSLESYS-VLIDLINYR 453
PSLE S V++D ++ R
Sbjct: 592 PSLEGVSHVVVDEVHER 608
Score = 103 (41.3 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 454 PDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
PDL+L++ SAT D + FS YFG P+ K+P Y V+ +Y
Sbjct: 627 PDLRLVLMSATGDNQRFSHYFGGCPVVKVPGFMYPVKEYY 666
Score = 38 (18.4 bits), Expect = 6.8e-27, Sum P(3) = 6.8e-27
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 295 IEDKIVDFFRESVELPDKSAVKSALEMLQEERKTL 329
I D +++ +ES + D K+ + ML+ E L
Sbjct: 423 IADDMMNLSKESGAISDAITGKTYIPMLEAEEVRL 457
>UNIPROTKB|Q8EJ41 [details] [associations]
symbol:hrpB "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 277 (102.6 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 71/185 (38%), Positives = 104/185 (56%)
Query: 453 RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEA----DYIEAAIV- 507
R DLK+L SATL S+ A + K R + VE+ Y D++ ++
Sbjct: 147 RDDLKILAMSATLSGLALSELMPYAALLKSEGRTFPVEIIYRAVAGQQHWLDHLSRTVLD 206
Query: 508 TALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQA 567
+A I + P DILVFL G+ + + L +R G +++A ICP+YG L + Q
Sbjct: 207 SAASITDSGP-QDILVFLPGKAEILRVAQYLAERLDG--SRVA---ICPLYGELSAQEQD 260
Query: 568 KIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKA 627
+ + G RK+VL+TN+AE+SLTI+GI VID G+ + S+NPKTG+ L + IS+A
Sbjct: 261 RAIKADASGRRKIVLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQA 320
Query: 628 SANQR 632
SA QR
Sbjct: 321 SATQR 325
Score = 105 (42.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LPI+ L A + + +++ TG+GK+T +P + + G+I +
Sbjct: 4 LPIHSLLPSLRDAFATHAQVILEAPTGAGKSTALPLAMLDWAEIS-GRILMLEPRRVAAR 62
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI- 447
+G EVG+ +R E S T L+ +T+G+L R I +P L ++I
Sbjct: 63 SVAQFIASCRQQAVGQEVGFRVRGEAKVSRDTRLEIVTEGILTRMIQQDPELTGIDMIIF 122
Query: 448 DLINYR 453
D I+ R
Sbjct: 123 DEIHER 128
>TIGR_CMR|SO_0632 [details] [associations]
symbol:SO_0632 "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 277 (102.6 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 71/185 (38%), Positives = 104/185 (56%)
Query: 453 RPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFYTKAPEA----DYIEAAIV- 507
R DLK+L SATL S+ A + K R + VE+ Y D++ ++
Sbjct: 147 RDDLKILAMSATLSGLALSELMPYAALLKSEGRTFPVEIIYRAVAGQQHWLDHLSRTVLD 206
Query: 508 TALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQA 567
+A I + P DILVFL G+ + + L +R G +++A ICP+YG L + Q
Sbjct: 207 SAASITDSGP-QDILVFLPGKAEILRVAQYLAERLDG--SRVA---ICPLYGELSAQEQD 260
Query: 568 KIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKA 627
+ + G RK+VL+TN+AE+SLTI+GI VID G+ + S+NPKTG+ L + IS+A
Sbjct: 261 RAIKADASGRRKIVLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQA 320
Query: 628 SANQR 632
SA QR
Sbjct: 321 SATQR 325
Score = 105 (42.0 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 329 LPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIGCTQLXXXXXX 388
LPI+ L A + + +++ TG+GK+T +P + + G+I +
Sbjct: 4 LPIHSLLPSLRDAFATHAQVILEAPTGAGKSTALPLAMLDWAEIS-GRILMLEPRRVAAR 62
Query: 389 XXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYSVLI- 447
+G EVG+ +R E S T L+ +T+G+L R I +P L ++I
Sbjct: 63 SVAQFIASCRQQAVGQEVGFRVRGEAKVSRDTRLEIVTEGILTRMIQQDPELTGIDMIIF 122
Query: 448 DLINYR 453
D I+ R
Sbjct: 123 DEIHER 128
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 200 (75.5 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 47/131 (35%), Positives = 71/131 (54%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYP--VLVIVGETGSGKTTQIPQYLYEAGYTK---QGK 376
L E+R+ LPI+ R L+ + P V+++ G+ GSGK+TQIPQ+ E + G+
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQTGQ 94
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL 436
+ TQ EM + LGHE+GYSI EDCT T+L++ D + L+E+
Sbjct: 95 VTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAS 154
Query: 437 EPSLESYSVLI 447
++SVLI
Sbjct: 155 TRGPGAWSVLI 165
Score = 182 (69.1 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 48/177 (27%), Positives = 85/177 (48%)
Query: 458 LLISSATLDAENFSDYFGSAPIFKIPRRRY-HVELFYTKAPEADYIEAAIVTALQI-HVN 515
++++ L+ + F ++G++PI ++PR L Y D +EAA L++
Sbjct: 198 VVVTDPALEPK-FQAFWGNSPIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELCQQE 256
Query: 516 EPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPE 575
E GD+LV+L +++ E L L + P++ +Q ++E T
Sbjct: 257 EAPGDVLVYLPSEEEISLCCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDV 315
Query: 576 GARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
RK+V+ +A+ S ++ I++VID G YNP+ ES ++ PISK A R
Sbjct: 316 SVRKIVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEAR 372
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 175 (66.7 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 47/142 (33%), Positives = 72/142 (50%)
Query: 319 LEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGKIG 378
L+ + ER LP+ F+E+++ + PV++I G TG GKTTQ+PQY+ + + K G+
Sbjct: 385 LQTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDE-FIKGGRAS 443
Query: 379 -C----TQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFED-CTSDKTVLKYMTDGMLLR 432
C TQ E G +G GYS+RFE + + T G+LLR
Sbjct: 444 DCNIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLR 503
Query: 433 EIVLEPSLESYS-VLIDLINYR 453
+ LE + S V++D I+ R
Sbjct: 504 K--LESGIRGISHVIVDEIHER 523
Score = 171 (65.3 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 42/121 (34%), Positives = 64/121 (52%)
Query: 512 IHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFE 571
I E G +LVFL G + ++ L+ G + I P++ +P E Q ++FE
Sbjct: 650 IETLEVPGAVLVFLPGWNLIYFMQKHLEMNPHFGGHQYR---ILPLHSQIPREEQRRVFE 706
Query: 572 PTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQ 631
P P+G KV+L+TNIAETS+TI+ + +V+D KVK + M + SK + Q
Sbjct: 707 PVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQ 766
Query: 632 R 632
R
Sbjct: 767 R 767
Score = 91 (37.1 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 15/49 (30%), Positives = 32/49 (65%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
VL D++ PD+++++ SAT+D F +YF + P+ ++ R + V+ ++
Sbjct: 533 VLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYF 581
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 194 (73.4 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 72/262 (27%), Positives = 117/262 (44%)
Query: 185 DAIQRSRKDDGIENLREVSRQKYLPKRAQKK-LEEIKDRTKDKENLFEGQKLTGAE---- 239
D +Q + + L + R ++ + AQ + L+ + ++ LF + + +
Sbjct: 75 DFLQSCEPEKQLPGLTKAQRS-HVHRLAQHRGLKTVSKGPEENRVLFISRPQSDGQQQYI 133
Query: 240 LC--ELDYEKKILDLVGQEGLQRCSHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIED 297
LC +LD +LD++GQ + + DLK KQQY D +
Sbjct: 134 LCNTKLDICPPLLDVLGQ----MAGNVERRLMNSVGDLKCN----KQQYKDIRLPSNFG- 184
Query: 298 KIVDFFRESVELPDKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSG 357
+V + + P + ++ +Q ER++LPIY RE +L + VL+I G TGSG
Sbjct: 185 -LVG--QRLIPPPQSNRNRN----IQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSG 237
Query: 358 KTTQIPQYLYE--AGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDC 415
K+TQ+PQY+ E A + +I +Q +E G G VGY+IR
Sbjct: 238 KSTQLPQYILEWAAEHRAPVRIVVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQ 297
Query: 416 TSDKTVLKYMTDGMLLREIVLE 437
S TVL T G LLR + ++
Sbjct: 298 CSSNTVLMLTTSGCLLRALAMD 319
Score = 152 (58.6 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 41/129 (31%), Positives = 70/129 (54%)
Query: 506 IVTALQIHVNE-PIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTE 564
IV+ L++ + + G ++V+L G + +L + L + +I+ ++ +
Sbjct: 447 IVSLLELLLRQGDAGAVIVYLPG---YSDMTSLLARLESSLPREQITIIL--LHSQVDNS 501
Query: 565 LQAKIFEPTPEGAR-KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNP 623
Q K+F P G R K++L+TNI +TS+TI + YVID G AK+K+Y+ L +
Sbjct: 502 EQRKVFRTYP-GVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTW 560
Query: 624 ISKASANQR 632
IS+A A QR
Sbjct: 561 ISQADAKQR 569
Score = 84 (34.6 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 454 PDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
P L+L++ SAT+D E S+YFG + + R + V +++
Sbjct: 357 PHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYH 396
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 192 (72.6 bits), Expect = 3.7e-26, Sum P(3) = 3.7e-26
Identities = 45/114 (39%), Positives = 69/114 (60%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G +LVFL G + T +E+L T T+ +L + P++ + +E QA++F P R
Sbjct: 392 GTVLVFLPGLAEINTLDELLAHET----TRY-KLWVLPLHSTITSEEQAQVFVPPRPHQR 446
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
KV+L+TNIAE+S+T+ IKYVID K +P+T +SL +N S+A+ QR
Sbjct: 447 KVILSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQR 500
Score = 187 (70.9 bits), Expect = 3.7e-26, Sum P(3) = 3.7e-26
Identities = 47/145 (32%), Positives = 78/145 (53%)
Query: 328 TLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQGK---IGCTQLXX 384
TLPI ++EE++ V V VI G+TGSGKTTQ+PQY+ + Y + + I TQ
Sbjct: 141 TLPITGYQEEIITTVESNSVTVIQGDTGSGKTTQVPQYILDH-YARANRWCNIVVTQPRR 199
Query: 385 XXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSLESYS 444
E G +LG VGY + + S+ T L ++T G+LL++++ ++ ++
Sbjct: 200 IAAISIARRVADERGWRLGGIVGYQVGMDKQQSEDTRLSFVTTGVLLQKLINTKNMNQFT 259
Query: 445 -VLIDLINYRP---DLKLLISSATL 465
V++D ++ R D LL++ L
Sbjct: 260 HVILDEVHERDQETDFALLVARKLL 284
Score = 56 (24.8 bits), Expect = 3.7e-26, Sum P(3) = 3.7e-26
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 456 LKLLISSATLDAENFSDYFG--------SAPIFKIPRRRYHVELFYTK 495
+K+++ SATLD+ F+ YF AP+ + R + V FY +
Sbjct: 291 VKVVLMSATLDSSMFAGYFSIPVRGELAPAPVVTVEGRLFPVTEFYVE 338
Score = 42 (19.8 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 22/80 (27%), Positives = 33/80 (41%)
Query: 20 GYSQPAVVQYVIGLSKQALSSADLETKLQEFEFSSTTETRAFAQEIFARVPRKESESKTN 79
G+ +V Y +G+ KQ S D T+L S T Q++ + K T+
Sbjct: 214 GWRLGGIVGYQVGMDKQ--QSED--TRL------SFVTTGVLLQKL---INTKNMNQFTH 260
Query: 80 TILDAAHY-DADDDVIRITA 98
ILD H D + D + A
Sbjct: 261 VILDEVHERDQETDFALLVA 280
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 198 (74.8 bits), Expect = 5.4e-26, Sum P(4) = 5.4e-26
Identities = 52/139 (37%), Positives = 77/139 (55%)
Query: 501 YIEAAIVT-----ALQIHVNEPI--GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELI 553
YI +A+V L H+++ G ILVFL G + L R G L+
Sbjct: 858 YIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLL 917
Query: 554 ICPIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPK 613
P++ ++ + Q K+F P+G RKV++ATNIAETS+TI+ + YVID G K YNP
Sbjct: 918 --PLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPH 975
Query: 614 TGMESLLVNPISKASANQR 632
+ S++ + +SKA+A QR
Sbjct: 976 KKLSSMVEDWVSKANARQR 994
Score = 193 (73.0 bits), Expect = 5.4e-26, Sum P(4) = 5.4e-26
Identities = 51/171 (29%), Positives = 93/171 (54%)
Query: 311 DKSAVKSALEMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE-- 368
+K ++ +ML+ R LPI ++++LQ + E VLV+ GETGSGKTTQ+PQ++ +
Sbjct: 580 NKKKMQKYKDMLKT-RAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDM 638
Query: 369 --AGYTKQGKIGCTQLXXXXXXXXXXXXXQEMGVKLGHEV-GYSIRFEDCTSDKTVLKYM 425
+G+ I CTQ E + V Y +R ++ SDKT L +
Sbjct: 639 IDSGHGGYCNIICTQPRAITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFC 698
Query: 426 TDGMLLREIVLEPSLESYS-VLIDLINYRP---DLKLLISSATLDAENFSD 472
T G+LLR++V + +L+ + +++D ++ R D L+I + ++ +++ +
Sbjct: 699 TTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDN 749
Score = 94 (38.1 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 48/157 (30%), Positives = 70/157 (44%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKI-----PRRRYHVELFY--TKAPEADYIE 503
N P LK+++ SAT+DA FS YFG PI P Y +E Y TK A
Sbjct: 749 NALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSP 808
Query: 504 AAIVTALQI-----HVNEPIGDILVFLTGQ-DQFETAEEILKQRTRGLGTKIAELIICPI 557
AA+ + I VN P G + L G D + +E+ L + IA ++
Sbjct: 809 AALSSDTSITDKLGSVNVPRGKKNLMLAGWGDSYLVSEDSLNTSYDSI-KYIASAVVD-- 865
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTID 594
Y +L EL I + EGA V L ++E ++ ++
Sbjct: 866 Y-DLLEELICHIDDTCEEGAILVFLP-GMSEINMLLN 900
Score = 48 (22.0 bits), Expect = 5.4e-26, Sum P(4) = 5.4e-26
Identities = 30/101 (29%), Positives = 42/101 (41%)
Query: 155 KEELERRIRERD-VAATRKLTG-PKLTWKEEYDAIQRSRKDDGIENLREVSRQKYLPKRA 212
+EELE ERD V+ R K E Y+AI+ RK D + Q L A
Sbjct: 202 EEELESSDDERDKVSGPRSFEVIAKEYCVERYNAIKAKRKGD-----KSGQSQAGL---A 253
Query: 213 QKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLV 253
KL+E + E + E + + CE EK++ V
Sbjct: 254 ICKLKEEMNALGPSEAILESEFQRDRQDCEGAREKEVASSV 294
Score = 37 (18.1 bits), Expect = 5.4e-26, Sum P(4) = 5.4e-26
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 261 CSHESDKQQRKKADLKY 277
CS KQ+ KK KY
Sbjct: 571 CSSLKQKQENKKKMQKY 587
Score = 37 (18.1 bits), Expect = 7.1e-25, Sum P(4) = 7.1e-25
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 187 IQRSRKD------DGIENLREVSRQKYLPKRAQKKLEEIKD 221
I +S+KD ++ ++EV + L + K+ EE +D
Sbjct: 140 ISKSKKDWNVSAESSVQEVKEVPESEVLVRVKSKRDEEEED 180
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 179 (68.1 bits), Expect = 9.1e-26, Sum P(5) = 9.1e-26
Identities = 47/122 (38%), Positives = 66/122 (54%)
Query: 511 QIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIF 570
++ + + G IL+FL G EI R G+ + L + P++ +L T+ Q K+F
Sbjct: 880 ELSLAQKSGGILIFLPG------VAEI--NRACGMLRSLNCLHVLPLHASLETKEQRKVF 931
Query: 571 EPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASAN 630
P P G RKVV+ATN+AETS+TID I V+D G K SY+ M L S A+
Sbjct: 932 VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACK 991
Query: 631 QR 632
QR
Sbjct: 992 QR 993
Score = 173 (66.0 bits), Expect = 9.1e-26, Sum P(5) = 9.1e-26
Identities = 42/114 (36%), Positives = 61/114 (53%)
Query: 325 ERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQY----LYEAGYTKQGKIGCT 380
+R+ LP + R+E+++ V+E+ V +I GETGSGK+TQ Q+ LY G I T
Sbjct: 629 QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVT 688
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREI 434
Q E ++G EVGY IR E T KT + ++T G+LLR +
Sbjct: 689 QPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRL 742
Score = 82 (33.9 bits), Expect = 9.1e-26, Sum P(5) = 9.1e-26
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 435 VLEPSLES---YSVLIDLINYRPDLKLLISSATLDAENFSDYF 474
V E SL++ S++ D++ R DLKL++ SATLD+ F+ YF
Sbjct: 767 VHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYF 809
Score = 43 (20.2 bits), Expect = 9.1e-26, Sum P(5) = 9.1e-26
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 180 WKEEYDAIQRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGA 238
W++E+ A+++ +G + E L +R + K + K R + + + L GA
Sbjct: 198 WRDEFQALKKEDVKEGKGWMYEADPFAALREREEAKAAKEKLRLQQQAVKEKAASLPGA 256
Score = 39 (18.8 bits), Expect = 9.1e-26, Sum P(5) = 9.1e-26
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 89 ADDDVIRITASTNKKRFRKRIGSEDDDDEGIAS 121
A+DD I T ST K+ KR G G AS
Sbjct: 41 AEDDFIVFTNST-KEGGGKRRGGGGGGGAGAAS 72
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 320 (117.7 bits), Expect = 9.3e-26, P = 9.3e-26
Identities = 71/191 (37%), Positives = 110/191 (57%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAPI--FKIPRRRYHVELFYTKAPEADYI 502
VL ++ R D +L++SSA++DA S +FG + I + + VE + + P +Y+
Sbjct: 161 VLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYV 220
Query: 503 EAAIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLP 562
++AI T + I+ P GDILVFL+G+ + E + ++ L+ P++ L
Sbjct: 221 DSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLT 280
Query: 563 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVN 622
+ Q ++F RKV+ +TNIAETS+TIDGI YV+D GF K + YNP T L+
Sbjct: 281 VDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINV 340
Query: 623 PISKASANQRT 633
PISK+SA QR+
Sbjct: 341 PISKSSAIQRS 351
Score = 292 (107.8 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 69/164 (42%), Positives = 94/164 (57%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQ-GKIGCT 380
L ++K LPI +R +LL AV + + +++G TG GKTTQIPQ+LYEAG+ Q G IGCT
Sbjct: 18 LNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCT 77
Query: 381 QLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVLEPSL 440
Q E+ G GYSI+F+ S+KT +KYMTDG+LL EI +P L
Sbjct: 78 QPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLL 137
Query: 441 ESYSVLI-DLINYRP---DLKLLISSATLDAEN-FSDYFGSAPI 479
E YS++I D ++ R DL L + L+ N F SA +
Sbjct: 138 ERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASV 181
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 205 (77.2 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 49/132 (37%), Positives = 73/132 (55%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYP--VLVIVGETGSGKTTQIPQYLYE----AGYTKQG 375
L ++R+ LPI+ R L+ + P V+++ GE GSGK+TQIPQ+ E G+ K G
Sbjct: 38 LLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQK-G 96
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIV 435
++ TQ EM + LGHEVGYSI EDCT T+L++ D +LL+E+
Sbjct: 97 QVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVA 156
Query: 436 LEPSLESYSVLI 447
++ VL+
Sbjct: 157 STRGTGAWGVLV 168
Score = 169 (64.5 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 50/180 (27%), Positives = 87/180 (48%)
Query: 455 DLKLLISSATLDAENFSDYFGSAPIFKIPRR--RYHVELFYTKAPEADYIEAAIVTALQI 512
DL++++ + ++G+ PI IPR +++ P D +EAA L++
Sbjct: 197 DLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLEL 255
Query: 513 HVNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEP 572
E GD+LVFL +++ E L + L + + P++ + +QA ++E
Sbjct: 256 CRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPRVLPLHPDCGRAVQA-VYED 314
Query: 573 TPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
ARKVV+ +A+ S ++ I++VID G YNP+ E ++ PISK A R
Sbjct: 315 MD--ARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEAR 372
Score = 38 (18.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 161 RIRERDVAATRKLTGPKLTWKEEY--DAIQRSRKDDGIENLREVSRQKYLP 209
R+ ++VA+TR TG W +A +RS D ++ L + +R + LP
Sbjct: 149 RLLLQEVASTRG-TG---AWGVLVLDEAQERSVASDSLQGLLQDARLEKLP 195
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 202 (76.2 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 47/131 (35%), Positives = 71/131 (54%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYP--VLVIVGETGSGKTTQIPQYLYEAGYTK---QGK 376
L E+R+ LPI+ R L+ + P V+++ GE GSGK+TQIPQ+ E + G+
Sbjct: 35 LLEQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQTGQ 94
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL 436
+ TQ EM + LGHE+GYSI EDCT T+L++ D + L+E+
Sbjct: 95 VTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAS 154
Query: 437 EPSLESYSVLI 447
++SVL+
Sbjct: 155 TRGPGAWSVLV 165
Score = 170 (64.9 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 458 LLISSATLDAENFSDYFGSAPIFKIPRRR-YHVELFYTKAPEADYIEAAIVTALQIHVNE 516
++++ + L+ + F ++G++P +PR + L Y AD +EAA L++ E
Sbjct: 198 VIVTDSALEPK-FQAFWGNSPTVHVPREPGENPTLTYKDTVPADLVEAACQAVLELCQRE 256
Query: 517 PI-GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPE 575
GD+LV+L +++ E L + L + P++ +Q ++E T
Sbjct: 257 EAPGDVLVYLPSEEEISLCCESLSREMGMLAVPGPLPRVLPLHPGCGQAIQT-VYEDTDV 315
Query: 576 GARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
RK+V+ +A+ S ++ I++VID G YNP+ ES ++ ISK A R
Sbjct: 316 SVRKIVVTHWLADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAEAR 372
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 200 (75.5 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 75/264 (28%), Positives = 124/264 (46%)
Query: 203 SRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCS 262
S + LP + E D K KE L K+ + +L + K+L+ + Q+ Q+
Sbjct: 450 SVHQLLPPTYRDVWLEWSDAEKKKEEL---NKMETNKPRDL-FIAKLLNKLKQQQQQQQQ 505
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALEM 321
H +K++ + D + +N +D+ + +K+ D E V L K +
Sbjct: 506 HSENKRENSE-DPEESWENLVSD-EDFSALSLESEKVEDL--EPVRNLFRKLQSTPKYQR 561
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEA------GYTKQG 375
L +ER+ LP++ R +++ + + V+V+ GETGSGK+TQ+P +L E G TK
Sbjct: 562 LLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCN 621
Query: 376 KIGCTQLXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSDKTVLKYMTDGML 430
I CTQ E+G + G GY IR E S+ T L Y T G+L
Sbjct: 622 -IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVL 680
Query: 431 LREIVLEPSLESYS-VLIDLINYR 453
LR++ + L + S V++D ++ R
Sbjct: 681 LRKLQEDGLLTNVSHVIVDEVHER 704
Score = 177 (67.4 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 43/114 (37%), Positives = 62/114 (54%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G +L+FL G + ++L R + + ++ L T+ QA F P+G R
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVR 921
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K+VLATNIAET +TI + +VID G K Y+ + M SL+ +SKASA QR
Sbjct: 922 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 975
Score = 130 (50.8 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 34/103 (33%), Positives = 56/103 (54%)
Query: 400 VKLGHEVGYSIRFEDCTSDKTVLKYMTDGML--LREIVL----EPSLESYSVLI---DLI 450
+++ S R CT+ + K DG+L + +++ E S++S +LI +++
Sbjct: 660 IRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEIL 719
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
R DL L++ SAT+D E FS YF PI +I R Y VE+F+
Sbjct: 720 QKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 52 (23.4 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 38/141 (26%), Positives = 62/141 (43%)
Query: 206 KYLPKRAQKKLE-EIKD---RTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRC 261
K +PK+ +KKLE +K+ R +++N + + E + D ++ L L + L
Sbjct: 213 KIMPKKDEKKLEVNMKEWILRYAEQQNEEKSETSKSLEEEKFDPNERYLHLAAKL-LDA- 270
Query: 262 SHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALE 320
K+Q L+ KNK+ Q E ++KI F R +E L D A++
Sbjct: 271 -----KEQAAAFKLE---KNKQGQK-------EAQEKIRKFQRVEMETLEDHPVFNPAIK 315
Query: 321 ML--QEERKTLPIYPFREELL 339
+ Q ERK P+ E L
Sbjct: 316 ISYQQNERKKPPVVTEGESAL 336
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 203 (76.5 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 48/131 (36%), Positives = 71/131 (54%)
Query: 322 LQEERKTLPIYPFREELLQAVSEYP--VLVIVGETGSGKTTQIPQYLYEAGYT---KQGK 376
L E+R+ LPI+ R L+ + P V+++ GE GSGK+TQIPQ+ E K+G+
Sbjct: 38 LLEQRRALPIWATRFIFLEQLESSPSGVVLVSGEPGSGKSTQIPQWCAEFALARGFKEGR 97
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL 436
+ TQ EM + LG EVGYSI EDCT T+L++ D +LL+E+
Sbjct: 98 VTVTQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVAS 157
Query: 437 EPSLESYSVLI 447
++ VL+
Sbjct: 158 TRGTGAWGVLV 168
Score = 166 (63.5 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 48/162 (29%), Positives = 79/162 (48%)
Query: 473 YFGSAPIFKIPRRRYHVEL-FYTKAPEADYIEAAIVTALQIHVNEPIGDILVFLTGQDQF 531
++G+ I +PR Y D +EAA L++ E GD+LV+L +++
Sbjct: 215 FWGNPTIVHVPRGPGACPTPVYRDIVPTDRVEAACQAVLELCAKEAPGDVLVYLPSEEEI 274
Query: 532 ETAEEILKQRTRGLGTKIAELIICPIY-GNLPTELQAKIFEPTPEGARKVVLATNIAETS 590
E L + L + + P++ G+ P +QA +E GARKVV+ +A+ S
Sbjct: 275 LQCCESLSREVEPLALRGPPPRVLPLHPGHGPA-VQAA-YEDIDLGARKVVVTHWLADFS 332
Query: 591 LTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
++ I++VID G YNP+ ES ++ PIS+ A R
Sbjct: 333 FSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEAR 374
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 197 (74.4 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 52/142 (36%), Positives = 75/142 (52%)
Query: 500 DYIEAAIVTALQIH--VNEPIGDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPI 557
D I+ + AL H VNE G ILVFL G D T ++L + II P+
Sbjct: 482 DNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRY-RFIIIPL 540
Query: 558 YGNLPTELQAKI-------FEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSY 610
+ +PT Q ++ F+ P G RK+V+ATNIAETS+TID + YVID G K +
Sbjct: 541 HSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF 600
Query: 611 NPKTGMESLLVNPISKASANQR 632
+ + + ++ +S A+A QR
Sbjct: 601 DTQNNIRTMTAEWVSIANAKQR 622
Score = 176 (67.0 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 58/199 (29%), Positives = 97/199 (48%)
Query: 266 DKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKI-VDFFRESVELPDKSAVKSA--LEML 322
+ + K+ D + K++ ++ + ++D + + F E ++ + +A +EML
Sbjct: 155 EPKDEKQEDAIKSRASLKEELNETNLEYLLQDVVQIPFLDEELKKDQQKKEDNAAYIEML 214
Query: 323 QEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTK-QG---KIG 378
+ RK LP Y REEL++ +S VLVI GETG GKTTQ+ Q++ + + QG ++
Sbjct: 215 KF-RKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRVV 273
Query: 379 CTQLXXXXXXXXXXXXXQEMGVKLGH--EVGYSIRFEDCTSDKT-VLKYMTDGMLLREIV 435
CTQ E +G GY IR + K L Y T G++L+ +
Sbjct: 274 CTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLH 333
Query: 436 LEPSLESYSVLI-DLINYR 453
+P L S + L+ D I+ R
Sbjct: 334 SDPYLSSITHLVLDEIHER 352
Score = 104 (41.7 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 430 LLREIVLEPSLES---YSVLIDLINYRPDLKLLISSATLDAENFSDYFGSAPIFKIP 483
L+ + + E S++S +++ DL+ R DLK+++ SATL+AE FS YF + P+ IP
Sbjct: 344 LVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIP 400
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 197 (74.4 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 44/114 (38%), Positives = 67/114 (58%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G IL+FL G + ++ + L + + I+ P++ L E QA +F+ P G R
Sbjct: 753 GTILIFLPGFGEIQSVHDSLLDNAL-FSPRAGKFILVPLHSALSGEDQALVFKKAPPGKR 811
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K+VL+TNIAETS+TID +V+D G K K ++ MESL + +S+A+A QR
Sbjct: 812 KIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQR 865
Score = 178 (67.7 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 51/150 (34%), Positives = 75/150 (50%)
Query: 326 RKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGY-------TKQG--- 375
RK LP + E +L + PV+VI GETG GK+TQ+PQ++ + + K+
Sbjct: 450 RKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPH 509
Query: 376 -KIGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREI 434
+I CTQ E ++G VGY IR E+ S T L + T G+LLR +
Sbjct: 510 VEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRL 569
Query: 435 VLEPSLESYS-VLIDLINYRP---DLKLLI 460
+P L S + V++D ++ R D LLI
Sbjct: 570 ASDPLLGSVTHVIVDEVHERSEESDFLLLI 599
Score = 138 (53.6 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 40/114 (35%), Positives = 67/114 (58%)
Query: 400 VKLGHEVGYSIRFEDCTSDKTVLKYMTDGML--LREIVL----EPSLES-YSVLI--DLI 450
++L ++V S R CT+ + + +D +L + +++ E S ES + +LI +L+
Sbjct: 545 IRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLL 604
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVE-LFYTKAPE-ADYI 502
R DLK+++ SATL+A FSDYFG AP+ IP R + V+ LF E +D++
Sbjct: 605 RERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFV 658
Score = 44 (20.5 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 148 RLRDQRGKEELERRIRERDVAAT-----RKLTGPKLTWKEEY 184
+L+ Q +E LER + DV A+ +K+ KLT E Y
Sbjct: 668 KLKKQE-QEILERELEYADVQASGEAPGKKIKDEKLTLAETY 708
Score = 39 (18.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 274 DLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEMLQ 323
D KY K KKQ+ Q + E E + D + S E P K L + +
Sbjct: 662 DTKYCRKLKKQE----QEILERELEYADV-QASGEAPGKKIKDEKLTLAE 706
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 180 (68.4 bits), Expect = 5.5e-25, Sum P(5) = 5.5e-25
Identities = 57/204 (27%), Positives = 101/204 (49%)
Query: 262 SHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDK--SAVKSAL 319
+++ KQQ + + N ++Y Y + +K + + + EL ++ +K
Sbjct: 559 NNKVQKQQNNNNNNNNNNNNNNNNNNNYNYKKVLNEK--EKLKINKELKNEYDRLIKVDK 616
Query: 320 EMLQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYEAGYTKQ-GK-- 376
++++ R++LP++ ++E L+ + E V+VI ETG GK+TQIPQY+ E+ +++ G
Sbjct: 617 GVIKK-RESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSEC 675
Query: 377 -IGCTQLXXXXXXXXXXXXXQEMGV-----KLGHEVGYSIRFEDCTSDKTVLKYMTDGML 430
I CTQ E +G VGY IR E S T L + T G+L
Sbjct: 676 NIVCTQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGIL 735
Query: 431 LREIVLEPSLESYS-VLIDLINYR 453
LR I+ ++ S ++ID ++ R
Sbjct: 736 LRRILDVSNISDLSHIIIDEVHER 759
Score = 168 (64.2 bits), Expect = 5.5e-25, Sum P(5) = 5.5e-25
Identities = 50/137 (36%), Positives = 72/137 (52%)
Query: 502 IEAAIVTALQIH-VNEPIG---DILVFLTG-QDQFETAEEILKQRTRGLGTKIAELIIC- 555
I +V +L +H VN + ILVF+ G D E + K + I + I C
Sbjct: 877 INLDVVESLILHLVNGVLKKDKSILVFVPGLSDILELCSRLGKPIST-FTEAICQRIWCV 935
Query: 556 PIYGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTG 615
P++ +L + Q K+FE P G KVV+ATNIAETS+TI+ ++ V+D G ++N TG
Sbjct: 936 PLHSSLSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITG 995
Query: 616 MESLLVNPISKASANQR 632
+ SKAS QR
Sbjct: 996 NSVMSEEWTSKASCRQR 1012
Score = 83 (34.3 bits), Expect = 5.5e-25, Sum P(5) = 5.5e-25
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 445 VLIDLINYRPDLKLLISSATLDAENFSDYFGSAP--IFKIPRRRYHVELFY 493
+L ++I+ R DLK+++ SATL+A+ ++YF IF IP + V+ Y
Sbjct: 769 ILREIISKRKDLKIILMSATLNAKQIANYFKCTDDSIFSIPGFTFPVKNIY 819
Score = 39 (18.8 bits), Expect = 5.5e-25, Sum P(5) = 5.5e-25
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 92 DVIRITASTNKKRFRKRIGSEDDDDE 117
D I++ N K I +DDDD+
Sbjct: 352 DTIKLI--NNTKSIYNDINDDDDDDD 375
Score = 39 (18.8 bits), Expect = 5.5e-25, Sum P(5) = 5.5e-25
Identities = 11/56 (19%), Positives = 26/56 (46%)
Query: 188 QRSRKDDGIENLREVSRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCEL 243
Q + DD E +E+ + L ++ EI+ + ++ ++ GQ + + C +
Sbjct: 405 QFTNDDDIKEQSKEIIENEILALQSIYMNNEIEFSSNNQHIIYNGQSPSSSFKCNI 460
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 196 (74.1 bits), Expect = 9.4e-25, Sum P(2) = 9.4e-25
Identities = 73/263 (27%), Positives = 122/263 (46%)
Query: 203 SRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCS 262
S + LP + E D K KE L K+ + +L + K+L+ + Q+ Q+
Sbjct: 450 SVHQLLPPTYRDVWLEWSDAEKKKEEL---NKMETNKPRDL-FIAKLLNKLKQQQQQQQQ 505
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALEM 321
H +K++ + D + +N +D+ + +K D E V L K +
Sbjct: 506 HSENKKENSE-DPEESWENLVSD-EDFSALSLESEKAEDL--EPVRNLFRKLQSTPKYQR 561
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE-----AGYTKQGK 376
L +ER+ LP++ R +++ + + V+V+ GETGSGK+TQ+P +L E T +
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSDKTVLKYMTDGMLL 431
I CTQ E+G + G GY IR E S+ T L Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 432 REIVLEPSLESYS-VLIDLINYR 453
R++ + L + S V++D ++ R
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHER 704
Score = 177 (67.4 bits), Expect = 9.4e-25, Sum P(2) = 9.4e-25
Identities = 43/114 (37%), Positives = 62/114 (54%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G +L+FL G + ++L R + + ++ L T+ QA F P+G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVR 924
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K+VLATNIAET +TI + +VID G K Y+ + M SL+ +SKASA QR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 978
Score = 131 (51.2 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 400 VKLGHEVGYSIRFEDCTSDKTVLKYMTDGML--LREIVL----EPSLESYSVLI---DLI 450
+++ S R CT+ + K DG+L + +++ E S++S +LI +++
Sbjct: 660 IRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEIL 719
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
R DL L++ SAT+D+E FS YF PI +I R Y VE+F+
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 196 (74.1 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 73/263 (27%), Positives = 122/263 (46%)
Query: 203 SRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCS 262
S + LP + E D K KE L K+ + +L + K+L+ + Q+ Q+
Sbjct: 450 SVHQLLPPTYRDVWLEWSDAEKKKEEL---NKMETNKPRDL-FIAKLLNKLKQQQQQQQQ 505
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALEM 321
H +K++ + D + +N +D+ + +K D E V L K +
Sbjct: 506 HSENKKENSE-DPEESWENLVSD-EDFSALSLESEKAEDL--EPVRNLFRKLQSTPKYQR 561
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE-----AGYTKQGK 376
L +ER+ LP++ R +++ + + V+V+ GETGSGK+TQ+P +L E T +
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSDKTVLKYMTDGMLL 431
I CTQ E+G + G GY IR E S+ T L Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 432 REIVLEPSLESYS-VLIDLINYR 453
R++ + L + S V++D ++ R
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHER 704
Score = 177 (67.4 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 43/114 (37%), Positives = 62/114 (54%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G +L+FL G + ++L R + + ++ L T+ QA F P+G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVR 924
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K+VLATNIAET +TI + +VID G K Y+ + M SL+ +SKASA QR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 978
Score = 131 (51.2 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 400 VKLGHEVGYSIRFEDCTSDKTVLKYMTDGML--LREIVL----EPSLESYSVLI---DLI 450
+++ S R CT+ + K DG+L + +++ E S++S +LI +++
Sbjct: 660 IRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEIL 719
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
R DL L++ SAT+D+E FS YF PI +I R Y VE+F+
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 196 (74.1 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 73/263 (27%), Positives = 122/263 (46%)
Query: 203 SRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCS 262
S + LP + E D K KE L K+ + +L + K+L+ + Q+ Q+
Sbjct: 450 SVHQLLPPTYRDVWLEWSDAEKKKEEL---NKMETNKPRDL-FIAKLLNKLKQQQQQQQQ 505
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALEM 321
H +K++ + D + +N +D+ + +K D E V L K +
Sbjct: 506 HSENKKENSE-DPEESWENLVSD-EDFSALSLESEKAEDL--EPVRNLFRKLQSTPKYQR 561
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE-----AGYTKQGK 376
L +ER+ LP++ R +++ + + V+V+ GETGSGK+TQ+P +L E T +
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSDKTVLKYMTDGMLL 431
I CTQ E+G + G GY IR E S+ T L Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 432 REIVLEPSLESYS-VLIDLINYR 453
R++ + L + S V++D ++ R
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHER 704
Score = 177 (67.4 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 43/114 (37%), Positives = 62/114 (54%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G +L+FL G + ++L R + + ++ L T+ QA F P+G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPQGVR 924
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K+VLATNIAET +TI + +VID G K Y+ + M SL+ +SKASA QR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 978
Score = 131 (51.2 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 400 VKLGHEVGYSIRFEDCTSDKTVLKYMTDGML--LREIVL----EPSLESYSVLI---DLI 450
+++ S R CT+ + K DG+L + +++ E S++S +LI +++
Sbjct: 660 IRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEIL 719
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
R DL L++ SAT+D+E FS YF PI +I R Y VE+F+
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 196 (74.1 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 73/263 (27%), Positives = 122/263 (46%)
Query: 203 SRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCS 262
S + LP + E D K KE L K+ + +L + K+L+ + Q+ Q+
Sbjct: 450 SVHQLLPPTYRDVWLEWSDAEKKKEEL---NKMETNKPRDL-FIAKLLNKLKQQQQQQQQ 505
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALEM 321
H +K++ + D + +N +D+ + +K D E V L K +
Sbjct: 506 HSENKRENSE-DPEESWENLVSD-EDFSALSLESEKAEDL--EPVRNLFRKLQSTPKYQR 561
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE-----AGYTKQGK 376
L +ER+ LP++ R +++ + + V+V+ GETGSGK+TQ+P +L E T +
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSDKTVLKYMTDGMLL 431
I CTQ E+G + G GY IR E S+ T L Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 432 REIVLEPSLESYS-VLIDLINYR 453
R++ + L + S V++D ++ R
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHER 704
Score = 174 (66.3 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 43/114 (37%), Positives = 61/114 (53%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G +L+FL G + ++L R + + ++ L T+ QA F P G R
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPPGVR 921
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K+VLATNIAET +TI + +VID G K Y+ + M SL+ +SKASA QR
Sbjct: 922 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 975
Score = 131 (51.2 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 400 VKLGHEVGYSIRFEDCTSDKTVLKYMTDGML--LREIVL----EPSLESYSVLI---DLI 450
+++ S R CT+ + K DG+L + +++ E S++S +LI +++
Sbjct: 660 IRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEIL 719
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
R DL L++ SAT+D+E FS YF PI +I R Y VE+F+
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 59 (25.8 bits), Expect = 7.7e-19, Sum P(3) = 7.7e-19
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 206 KYLPKRAQKKLE-EIKD---RTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRC 261
K PK+ +K LE +K+ R +++N E +K ++ L+ E+K D + L
Sbjct: 212 KIKPKKEEKNLEVNMKEWILRYAEQQN--EEEKSENSK--SLEEEEKF-D-PNERYLHLA 265
Query: 262 SHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEM 321
+ D +++ A K KNK+ Q E ++KI F RE L D A+++
Sbjct: 266 AKLLDAKEQA-ATFKL-EKNKQGQK-------EAQEKIRKFQREMETLEDHPVFNPAIKI 316
Query: 322 L--QEERKTLPIYPFREELL 339
Q ERK P+ E+ L
Sbjct: 317 SHQQNERKKPPVATEEEKAL 336
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 196 (74.1 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 73/263 (27%), Positives = 122/263 (46%)
Query: 203 SRQKYLPKRAQKKLEEIKDRTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRCS 262
S + LP + E D K KE L K+ + +L + K+L+ + Q+ Q+
Sbjct: 450 SVHQLLPPTYRDVWLEWSDAEKKKEEL---NKMETNKPRDL-FIAKLLNKLKQQQQQQQQ 505
Query: 263 HESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVE-LPDKSAVKSALEM 321
H +K++ + D + +N +D+ + +K D E V L K +
Sbjct: 506 HSENKRENSE-DPEESWENLVSD-EDFSALSLESEKAEDL--EPVRNLFRKLQSTPKYQR 561
Query: 322 LQEERKTLPIYPFREELLQAVSEYPVLVIVGETGSGKTTQIPQYLYE-----AGYTKQGK 376
L +ER+ LP++ R +++ + + V+V+ GETGSGK+TQ+P +L E T +
Sbjct: 562 LLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCN 621
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHE-----VGYSIRFEDCTSDKTVLKYMTDGMLL 431
I CTQ E+G + G GY IR E S+ T L Y T G+LL
Sbjct: 622 IVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 681
Query: 432 REIVLEPSLESYS-VLIDLINYR 453
R++ + L + S V++D ++ R
Sbjct: 682 RKLQEDGLLTNVSHVIVDEVHER 704
Score = 174 (66.3 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 43/114 (37%), Positives = 61/114 (53%)
Query: 519 GDILVFLTGQDQFETAEEILKQRTRGLGTKIAELIICPIYGNLPTELQAKIFEPTPEGAR 578
G +L+FL G + ++L R + + ++ L T+ QA F P G R
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK---VIALHSILSTQDQAAAFTLPPPGVR 924
Query: 579 KVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPISKASANQR 632
K+VLATNIAET +TI + +VID G K Y+ + M SL+ +SKASA QR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQR 978
Score = 131 (51.2 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 34/103 (33%), Positives = 57/103 (55%)
Query: 400 VKLGHEVGYSIRFEDCTSDKTVLKYMTDGML--LREIVL----EPSLESYSVLI---DLI 450
+++ S R CT+ + K DG+L + +++ E S++S +LI +++
Sbjct: 660 IRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEIL 719
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHVELFY 493
R DL L++ SAT+D+E FS YF PI +I R Y VE+F+
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 60 (26.2 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 206 KYLPKRAQKKLE-EIKD---RTKDKENLFEGQKLTGAELCELDYEKKILDLVGQEGLQRC 261
K PK+ +K LE +K+ R +++N E +K ++ L+ E+K D + L
Sbjct: 212 KIKPKKEEKNLEVNMKEWILRYAEQQN--EEEKSENSK--SLEEEEKF-D-PKERNLHLA 265
Query: 262 SHESDKQQRKKADLKYGSKNKKQQYDDYQYVFEIEDKIVDFFRESVELPDKSAVKSALEM 321
+ D +++ A K KNK+ Q E ++KI F RE L D A+++
Sbjct: 266 AKLLDAKEQA-ATFKL-EKNKQGQK-------EAQEKIRKFQREMETLEDHPVFNPAIKI 316
Query: 322 L--QEERKTLPIYPFREELL 339
Q ERK P+ E+ L
Sbjct: 317 SHQQNERKKPPVATEEEKAL 336
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 202 (76.2 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 61/186 (32%), Positives = 88/186 (47%)
Query: 451 NYRPDLKLLISSATLDAENFSDYFGSAPIFKIPRRRYHV-ELFYTKAPEAD-----YIEA 504
N + LK+++ SAT++ S +FG+ PIF IP R Y V E F D YI+A
Sbjct: 100 NRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQA 159
Query: 505 AIVTALQIHVNEPIGDILVFLTGQDQFETAEEILKQRTRGLG-------TKIAELIICPI 557
+ + IH+NE GDILVFLTGQ + E + E+L Q + T + L+I P
Sbjct: 160 IVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPC 219
Query: 558 YGNLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGME 617
YG++ T Q + T K + + T LTI GI V + + N K +
Sbjct: 220 YGSMTTVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGITGVSHHARPRNMTCNEKLNQQ 279
Query: 618 SLLVNP 623
+ P
Sbjct: 280 RRIFLP 285
Score = 192 (72.6 bits), Expect = 2.8e-23, Sum P(2) = 2.8e-23
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 566 QAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFAKVKSYNPKTGMESLLVNPIS 625
Q +IF P P G RK V++TNI+ TSLTIDGI+YV+D GF K ++NP+ G++ L V PIS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 626 KASANQRT 633
K+ A QR+
Sbjct: 339 KSEALQRS 346
Score = 160 (61.4 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 377 IGCTQLXXXXXXXXXXXXXQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREIVL 436
IG TQ +EM LG +VGY +RF+DC+S +T +KYMTDG LL+ I+
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 61
Query: 437 EPSLESYSVLI 447
+P+L +SV+I
Sbjct: 62 DPNLTKFSVII 72
Score = 39 (18.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 547 TKIAELIICPIYGNLPTELQAKIFE 571
TK+ I+CPI +L K+ E
Sbjct: 629 TKVYARIVCPIRYEWVRDLLPKLHE 653
WARNING: HSPs involving 58 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.133 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 633 594 0.00084 120 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 308
No. of states in DFA: 608 (65 KB)
Total size of DFA: 286 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.29u 0.09s 59.38t Elapsed: 00:00:06
Total cpu time: 59.35u 0.09s 59.44t Elapsed: 00:00:06
Start: Fri May 10 04:10:15 2013 End: Fri May 10 04:10:21 2013
WARNINGS ISSUED: 2