BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035703
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 97/159 (61%), Gaps = 31/159 (19%)
Query: 11 STAATTTTGVGLGYGIAIAVSILVLISTIMLASYACIRVKANANRGGGS----------- 59
S + +GVGLGYGIAIAVSILVLIS IMLASY CIR K+ S
Sbjct: 2 SPISPPASGVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAA 61
Query: 60 ----GGD----------YIGREYENARTNDYGPCSICLCDYKPKDSVRCIPDCHHCFHAD 105
G D +G R N+ GPCSICLCDY+ ++ VRCIP+C+HCFH D
Sbjct: 62 EVKLGLDRPVIESYPRIVLGDSRRLPRPNN-GPCSICLCDYEAREPVRCIPECNHCFHTD 120
Query: 106 CVDEWLRMSATCPLCRSSP-----ATPLAEVVPLASHAR 139
CVDEWLR SATCPLCR+SP ATPL+++VPLA R
Sbjct: 121 CVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLAFQIR 159
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 84/188 (44%), Gaps = 54/188 (28%)
Query: 2 STANPPVVASTAATTTTGVGLGYGIAIAVSILVLISTIMLASYACIRVKANANRG----- 56
+T PP T GL YGI +++ IL+LI+TI L SY C R +A+
Sbjct: 3 ATVVPPYSGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRT 62
Query: 57 -------------GGSGGDYIGRE-----------------------YENAR-------- 72
G D+ E YE AR
Sbjct: 63 RRRQRESNGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKE 122
Query: 73 TNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSP-----ATP 127
++ CSICL DYK D +R +PDC+H FH +CVD WLR+ TCP+CR+SP TP
Sbjct: 123 SSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTP 182
Query: 128 LAEVVPLA 135
+A+VVP +
Sbjct: 183 VADVVPFS 190
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 31/147 (21%)
Query: 21 GLGYGIAIAVSILVLISTIMLASYACIRVKANANRGG---------------------GS 59
G YGI +++ +L+LI+TI L SY C R + +++ G
Sbjct: 63 GFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHVIIDVVPGL 122
Query: 60 GGDYIGREYENARTNDYGP-----CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMS 114
D I + + GP C+ICL DYK K +R +PDC+H FH C+D WLR++
Sbjct: 123 DEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLN 182
Query: 115 ATCPLCRSSP-----ATPLAEVVPLAS 136
TCP+CR+SP +TPLAEVVPLAS
Sbjct: 183 PTCPVCRTSPLPTPLSTPLAEVVPLAS 209
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 9/69 (13%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSP---------ATPLA 129
CSICLC+Y ++ +R +P+C H FH C+D WL+++ +CP+CR+SP +TPL+
Sbjct: 136 CSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLS 195
Query: 130 EVVPLASHA 138
EVVPL+ +A
Sbjct: 196 EVVPLSQYA 204
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 15 TTTTGVGLGYGIAIAVSILVLISTIMLASYACIR 48
T T +GLGY IAIA+ LVLISTI+L+SY C R
Sbjct: 19 TYITSLGLGYSIAIALGFLVLISTIILSSYICCR 52
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 57/176 (32%)
Query: 18 TGVGLGYGIAIAVSILVLISTIMLASYACIR--------VKANANRGGG----------- 58
T +G GY IAIA+ LVL+ST++L+SY C R V++ +RGG
Sbjct: 31 TTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAE 90
Query: 59 ------SGGDYIGREYENARTNDY----------------------GPCSICLCDYKPKD 90
GD + + A N Y CSICLC+YK +
Sbjct: 91 EDNEDLEAGDVV-VGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAE 149
Query: 91 SVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSP---------ATPLAEVVPLASH 137
+R +P+C H FH C+D WL+++ +CP+CR+SP +TPL+EVVPL+ +
Sbjct: 150 MLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLSQY 205
>sp|P0CH01|AT21A_ARATH Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana
GN=ATL21A PE=3 SV=1
Length = 372
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%)
Query: 74 NDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPA 125
ND C ICL +Y K++VRCIP+C HCFH++C+D WL++ +CPLCR+SP+
Sbjct: 315 NDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNSPS 366
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 39/47 (82%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPA 125
C ICL +Y K++VRC+P+C HCFH +C+D WL++ ++CP+CRS+P+
Sbjct: 327 CPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNPS 373
>sp|Q9C7E9|ATL20_ARATH RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2
SV=2
Length = 299
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 37/45 (82%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS 123
C ICL +Y K++VRC+P+C HCFH C+DEWL++ ++CP+CR+S
Sbjct: 253 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCRNS 297
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 58 GSGGDYIGREYENARTNDYGP----CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRM 113
G GD + R R D P CS+CL D++ ++VR +P CHH FH C+D+WLR
Sbjct: 152 GLTGDSLNR-IPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRR 210
Query: 114 SATCPLCR 121
A+CPLCR
Sbjct: 211 HASCPLCR 218
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS 123
C +CLC+++ +D +R +P C H FH +C+D WL +TCPLCRS+
Sbjct: 126 CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSN 170
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
C++CLC+++ +D +R +P C H FH DC+D WL +TCPLCR
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPA 125
C ICL +Y K++VR IP+C HCFHA C+D WL++ +CPLCR+S A
Sbjct: 316 CPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNSRA 362
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS 123
C ICL +Y K++VR IP+C HCFH +C+D WL++ +CPLCR+S
Sbjct: 320 CPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSCPLCRNS 364
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRS--SPATPLAEVVPLAS 136
CS+CL +++ D R +P C H FH DC+D W R ++CPLCR+ PA P+ E P+A+
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAA 172
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPATP 127
C++CLC++ KD +R +P C H FH +C+D WL+ ++TCPLCR + +P
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSP 191
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 77 GPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRS 122
G C++CL ++P+D +R +P C H FHADC+D WL + TCPLCRS
Sbjct: 115 GDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRS 160
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPATPLAEVV 132
CS+CL +++ +D R +P C H FH DC+D W R +TCPLCR +P P +V+
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCR-APVQPPFQVI 160
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
C++CLC++ D +R +P+C H FH DC+D WL ++TCPLCR
Sbjct: 144 CAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 30/43 (69%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
CS+CL DY+P D ++ IP C H FH DC+D WL TCPLCR
Sbjct: 100 CSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCR 142
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 26 IAIAVSILVLISTIMLASYACIRVK------ANANRGGGSGGDYIG-------REYENAR 72
++I+ +L++IS L Y R + N R G + I R+ +
Sbjct: 211 VSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQVRTIRKGDKET 270
Query: 73 TNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
+D+ C++C+ YKP D VR +P C H FH CVD WL TCP+C+
Sbjct: 271 ESDFDNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCK 318
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS------PATPLAEVV 132
C++CL +++ D VR +P C H FH +C+DEWLR CPLCR++ TP++ V
Sbjct: 156 CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFV 215
Query: 133 PL 134
PL
Sbjct: 216 PL 217
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPATPLAEVVP 133
C+ICLC+++ ++ +R +P C H FHA+C+DEWL +TCP+CR++ + + P
Sbjct: 120 CAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSLKSGDSFP 174
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRS 122
CS+CL +++ ++ +R IP+C H FH DC+D WL+ +A CPLCR+
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRT 181
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 69 ENARTNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS 123
E ++ + CS+CL +++ + +R IP+C H FH DC+D WL+ +A CPLCR+S
Sbjct: 124 EEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTS 178
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 26 IAIAVSILVLISTIMLASYACIRVK------ANANRGGGSGGDYIGR-------EYENAR 72
++I+ +L++IS L Y R + N R G + I + + +
Sbjct: 212 VSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQIRTIKKGDKET 271
Query: 73 TNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
+D+ C++C+ YKP D VR +P C H FH CVD WL TCP+C+
Sbjct: 272 ESDFDNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCK 319
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPATPLA-EVVPLASH 137
CS+CL +++ +S+R +P C+H FH C+D WL+ + CPLCR+ T A E+V L +
Sbjct: 159 CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQ 218
Query: 138 A 138
Sbjct: 219 Q 219
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
CS+CL ++ + +R +P C H FH C+D+WL ATCPLCR
Sbjct: 123 CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 165
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 68 YENARTNDYGP----CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS 123
Y + +T G C+ICL +++ +++R +P C H FH C+D WL TCP+CR++
Sbjct: 113 YSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRAN 172
Query: 124 PATPLAE 130
A +AE
Sbjct: 173 LAEQVAE 179
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRS 122
C++CLC+++ +++R +P C H FHADCVD WL +TCPLCR+
Sbjct: 135 CAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRA 178
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 26 IAIAVSILVLISTIMLASYACIRVK------ANANRGGGSGGDYIG-------REYENAR 72
++I+ IL++IS L Y R + N R G + I R+ +
Sbjct: 201 VSISFIILMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISQLQVRTIRKGDQET 260
Query: 73 TNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
+D+ C++C+ YKP D VR +P C H FH CVD WL TCP+C+
Sbjct: 261 ESDFDNCAVCIEGYKPNDVVRILP-CRHLFHKCCVDPWLVDHRTCPMCK 308
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%)
Query: 68 YENARTNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS 123
Y A C ICL D++ ++V+ IP C H FH DCVD WL TCPLCRS+
Sbjct: 129 YTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSN 184
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 61 GDYIGREYENARTNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLC 120
G + ++++N + CSICL ++ +S+R +P C+H FH C+D WL+ + CPLC
Sbjct: 137 GFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLC 196
Query: 121 RSSPATPLAE 130
R+ P +
Sbjct: 197 RAKIIVPTTQ 206
>sp|Q9Y225|RNF24_HUMAN RING finger protein 24 OS=Homo sapiens GN=RNF24 PE=1 SV=1
Length = 148
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 24 YGIAIAVSILVLISTIMLASYACIRVKANANRGGGSGGDYIGREYENARTNDYGPCSICL 83
Y + +I V I +++ Y IR++ A++ + I +E + N + C++CL
Sbjct: 25 YIVVFGTAIFVFILSLLFCCYL-IRLRHQAHKEFYAYKQVILKE-KVKELNLHELCAVCL 82
Query: 84 CDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPATPLAEV 131
D+KP+D + P C H FH C+ +WL + CPLC + P LA++
Sbjct: 83 EDFKPRDELGICP-CKHAFHRKCLIKWLEVRKVCPLC-NMPVLQLAQL 128
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 75 DYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRS 122
D CS+CL +++ +S+R +P C+H FH C+D WL+ + CPLCR+
Sbjct: 138 DGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA 185
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
CS+CL D++ ++VR +P CHH FH C+D WL +CP+CR
Sbjct: 196 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCR 238
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 68 YENARTNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRS 122
+ + D C++CL +++ ++ R +P+C H FH DC+D W +TCPLCRS
Sbjct: 108 FSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162
>sp|Q8BGI1|RNF24_MOUSE RING finger protein 24 OS=Mus musculus GN=Rnf24 PE=2 SV=1
Length = 148
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 24 YGIAIAVSILVLISTIMLASYACIRVKANANRGGGSGGDYIGREYENARTNDYGPCSICL 83
Y + ++ V I +++ Y IR++ A++ + I +E + N + C++CL
Sbjct: 25 YIVVFGTAVFVFILSLLFCCYL-IRLRHQAHKEFYAYKQVILKE-KVKELNLHELCAVCL 82
Query: 84 CDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPATPLAEV 131
D+KP+D + P C H FH C+ +WL + CPLC + P LA++
Sbjct: 83 EDFKPRDELGICP-CKHAFHRKCLVKWLEVRKVCPLC-NMPVLQLAQL 128
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
CS+CL D++ ++VR +P CHH FH C+D WL +CP+CR
Sbjct: 191 CSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCR 233
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 74 NDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS 123
+D C++CL ++ +D +R +P C H FH +C+D WL ++TCPLCR +
Sbjct: 117 HDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDN 166
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 78 PCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRS 122
CS+CL ++ + +R +P C H FH C+D+WL ATCPLCR+
Sbjct: 123 ECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRN 167
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSPATPLAEVVP 133
C+ICL +++ ++++R +P C H FHA+C+D WL +TCP+CR++ + E P
Sbjct: 123 CAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESYP 177
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS 123
C +CL ++K +++R +P C H FHADCVD WL S+TCP+CR+
Sbjct: 85 CVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAK 129
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 24/132 (18%)
Query: 14 ATTTTGVGLGYGIAIAVSILVLISTIMLASYACIRVKANANRGGGSGGDYIG-------- 65
+ +T L + + V I V++ I+L +R +N N S G ++
Sbjct: 12 SNSTESQILKFTFIVCVPICVIL--IVLLVLYIMRRNSNTNVDWSSLGGFVPTNNNLSTA 69
Query: 66 --------RE------YENARTNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWL 111
RE Y+ + T + CS+CL DY+ ++ ++ +P C H FH +C+D WL
Sbjct: 70 ELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWL 129
Query: 112 RMSATCPLCRSS 123
TCPLCR S
Sbjct: 130 TSHTTCPLCRLS 141
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
C++CL ++P + +R +P C H FH +CVD WL +TCPLCR
Sbjct: 146 CAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 188
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 26 IAIAVSILVLISTIMLASYACIRVK------ANANRGGGSGGDYIGR-------EYENAR 72
++I+ +L++IS+ L Y +++ N R G + I + + +
Sbjct: 198 VSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKET 257
Query: 73 TNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
D+ C++C+ YK D VR +P C H FH CVD WL TCP+C+
Sbjct: 258 DPDFDHCAVCIESYKQNDVVRVLP-CKHVFHKSCVDPWLSEHCTCPMCK 305
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 26 IAIAVSILVLISTIMLASYACIRVK------ANANRGGGSGGDYIGR-------EYENAR 72
++I+ +L++IS+ L Y +++ N R G + I + + +
Sbjct: 198 VSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKET 257
Query: 73 TNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
D+ C++C+ YK D VR +P C H FH CVD WL TCP+C+
Sbjct: 258 DPDFDHCAVCIESYKQNDVVRVLP-CKHVFHKSCVDPWLSEHCTCPMCK 305
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRS 122
CS+CL +++ +++R IP C H FH C+D WLR TCPLCR+
Sbjct: 144 CSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRA 187
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 26 IAIAVSILVLISTIMLASYACIRVK------ANANRGGGSGGDYIGR-------EYENAR 72
++I+ +L++IS+ L Y +++ N R G + I + + +
Sbjct: 198 VSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKET 257
Query: 73 TNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
D+ C++C+ YK D VR +P C H FH CVD WL TCP+C+
Sbjct: 258 DPDFDHCAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCK 305
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 79 CSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSS 123
C+ICL + + ++VR +P C+H FH DC+D WL ATCP+CRS+
Sbjct: 124 CAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSN 168
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 67 EYENARTNDYGPCSICLCDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCR 121
++ + + D C+IC+ YKP D++R +P C H FH +C+D WL TCP+C+
Sbjct: 291 KFSDEKDLDSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLIEHRTCPMCK 344
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,719,258
Number of Sequences: 539616
Number of extensions: 2061165
Number of successful extensions: 6364
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 5884
Number of HSP's gapped (non-prelim): 555
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)