Query 035709
Match_columns 75
No_of_seqs 101 out of 297
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 09:05:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035709.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035709hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gm6_A PFKB family carbohydrat 96.8 0.00033 1.1E-08 49.4 1.3 31 39-70 25-55 (351)
2 3pl2_A Sugar kinase, ribokinas 95.1 0.0086 2.9E-07 41.5 1.9 31 37-67 7-37 (319)
3 3hj6_A Fructokinase, FRK; fruc 94.2 0.015 5.3E-07 40.7 1.4 31 36-66 19-49 (327)
4 4du5_A PFKB; structural genomi 93.9 0.015 5.1E-07 41.1 0.9 37 16-57 9-45 (336)
5 3ktn_A Carbohydrate kinase, PF 93.8 0.02 6.7E-07 40.2 1.3 19 39-57 3-21 (346)
6 3ewm_A Uncharacterized sugar k 93.0 0.025 8.5E-07 39.2 0.8 19 39-57 2-20 (313)
7 3ljs_A Fructokinase; fructokia 91.6 0.057 1.9E-06 37.8 1.2 21 37-57 3-23 (338)
8 2qcv_A Putative 5-dehydro-2-de 91.5 0.074 2.5E-06 36.9 1.6 21 37-57 10-30 (332)
9 2qhp_A Fructokinase; NP_810670 90.2 0.078 2.7E-06 36.1 0.8 18 37-54 2-19 (296)
10 1v1a_A 2-keto-3-deoxygluconate 88.8 0.13 4.6E-06 35.4 1.1 18 40-57 3-20 (309)
11 2v78_A Fructokinase; transfera 88.7 0.13 4.5E-06 35.5 1.0 18 40-57 3-20 (313)
12 3kd6_A Carbohydrate kinase, PF 88.3 0.15 5.1E-06 35.5 1.1 18 38-55 2-19 (313)
13 3lhx_A Ketodeoxygluconokinase; 87.8 0.13 4.6E-06 35.6 0.6 18 38-55 4-21 (319)
14 3h49_A Ribokinase; transferase 87.7 0.16 5.5E-06 35.4 1.0 17 38-54 5-21 (325)
15 2dcn_A Hypothetical fructokina 87.6 0.17 5.6E-06 34.8 1.0 19 39-57 2-20 (311)
16 3iq0_A Putative ribokinase II; 87.5 0.14 4.8E-06 35.8 0.6 17 39-55 4-20 (330)
17 4e69_A 2-dehydro-3-deoxyglucon 85.9 0.21 7.2E-06 35.1 0.8 18 37-54 22-39 (328)
18 2hlz_A Ketohexokinase; non-pro 81.5 0.41 1.4E-05 33.2 0.7 21 33-53 12-32 (312)
19 3go6_A Ribokinase RBSK; phosph 81.3 0.42 1.4E-05 33.5 0.7 19 36-54 17-35 (310)
20 2abs_A Adenosine kinase, AK; r 78.7 0.65 2.2E-05 33.3 1.0 19 36-54 30-48 (383)
21 2afb_A 2-keto-3-deoxygluconate 78.1 0.8 2.7E-05 32.1 1.3 20 36-55 10-29 (351)
22 1rkd_A Ribokinase; carbohydrat 76.5 0.71 2.4E-05 31.6 0.7 16 39-54 5-20 (309)
23 3kzh_A Probable sugar kinase; 75.8 0.9 3.1E-05 31.6 1.1 19 37-55 5-23 (328)
24 2fv7_A Ribokinase; structural 75.2 0.81 2.8E-05 32.0 0.7 16 39-54 25-40 (331)
25 2nwh_A AGR_C_3442P, carbohydra 75.1 0.76 2.6E-05 31.8 0.6 16 39-54 4-19 (317)
26 1tyy_A Putative sugar kinase; 73.6 0.9 3.1E-05 32.1 0.6 16 39-54 25-40 (339)
27 3ikh_A Carbohydrate kinase; tr 67.8 1.6 5.3E-05 30.1 0.8 17 38-54 2-18 (299)
28 2rbc_A Sugar kinase, AGR_C_456 67.1 1.7 5.8E-05 30.9 0.9 15 39-53 30-44 (343)
29 3ry7_A Ribokinase; transferase 66.3 1.6 5.5E-05 29.6 0.6 15 39-53 3-17 (304)
30 3bf5_A Ribokinase related prot 64.5 1.8 6.2E-05 30.1 0.6 18 37-54 19-36 (306)
31 2c4e_A Sugar kinase MJ0406; tr 61.5 2.1 7.1E-05 29.3 0.5 15 40-54 7-21 (302)
32 2pkf_A Adenosine kinase; trans 60.9 2.8 9.5E-05 29.4 1.0 16 39-54 11-26 (334)
33 1bx4_A Protein (adenosine kina 58.5 3.1 0.00011 28.9 0.9 18 37-54 5-22 (345)
34 4e3a_A Sugar kinase protein; s 58.2 2.8 9.6E-05 29.8 0.7 18 37-54 24-41 (352)
35 4e84_A D-beta-D-heptose 7-phos 54.2 3.6 0.00012 29.4 0.7 18 36-53 51-68 (352)
36 2hsj_A Putative platelet activ 46.0 12 0.00041 23.3 2.1 32 11-50 15-46 (214)
37 3b1n_A Ribokinase, putative; r 44.8 5.9 0.0002 27.6 0.6 15 40-54 2-16 (326)
38 3otx_A Adenosine kinase, putat 42.2 8.1 0.00028 26.9 0.9 19 37-55 6-24 (347)
39 3uq6_A Adenosine kinase, putat 39.3 10 0.00035 27.0 1.1 16 39-54 27-42 (372)
40 3vas_A Putative adenosine kina 33.0 13 0.00045 26.5 0.8 18 38-55 24-41 (370)
41 3loo_A Anopheles gambiae adeno 30.5 17 0.00058 25.7 1.1 20 36-55 21-40 (365)
42 3rcm_A TATD family hydrolase; 27.5 18 0.00063 25.8 0.8 17 38-54 89-105 (287)
43 4hf7_A Putative acylhydrolase; 25.2 5.8 0.0002 25.5 -2.0 15 37-51 25-39 (209)
44 1vm7_A Ribokinase; TM0960, str 24.2 22 0.00075 24.5 0.7 18 37-54 13-30 (311)
45 2v5b_A Triosephosphate isomera 22.8 27 0.00093 25.2 1.0 34 10-50 89-127 (244)
46 4g1k_A Triosephosphate isomera 22.0 29 0.00098 25.6 1.0 11 40-50 148-158 (272)
47 3kxq_A Triosephosphate isomera 21.4 30 0.001 25.6 1.0 10 40-49 148-157 (275)
48 3ta6_A Triosephosphate isomera 20.2 33 0.0011 25.2 1.0 11 40-50 128-138 (267)
49 3m9y_A Triosephosphate isomera 20.2 33 0.0011 24.9 1.0 10 40-49 126-135 (254)
No 1
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=96.81 E-value=0.00033 Score=49.36 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=25.0
Q ss_pred ccEEEecchhhhhccCCCCCCccchhhhhhcc
Q 035709 39 ALVVCFGELLIDFLPTESGVSLAKASAFRKER 70 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~~~G~sL~~v~sFek~P 70 (75)
.+|+||||+||||.|... .++..+..|+.++
T Consensus 25 ~kv~~~GE~m~~l~p~~~-~~~~~~~~~~~~~ 55 (351)
T 4gm6_A 25 KQVVTIGELLMRLSTQQG-IPFSQTTALDIHI 55 (351)
T ss_dssp CEEEEECCCEEEEECCTT-CCGGGCSEEEEEE
T ss_pred CCEEEEcceeEEecCCCC-CCccccCeEEEec
Confidence 589999999999999764 4688888887653
No 2
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=95.13 E-value=0.0086 Score=41.46 Aligned_cols=31 Identities=35% Similarity=0.577 Sum_probs=22.8
Q ss_pred CCccEEEecchhhhhccCCCCCCccchhhhh
Q 035709 37 KKALVVCFGELLIDFLPTESGVSLAKASAFR 67 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~~~G~sL~~v~sFe 67 (75)
+.++|++|||++||+++...+.++..+..|.
T Consensus 7 ~~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~ 37 (319)
T 3pl2_A 7 STHEVLAIGRLGVDIYPLQSGVGLADVQSFG 37 (319)
T ss_dssp CCCSEEEESCCEEEECBSSSSCCGGGCCCBC
T ss_pred cCCCEEEEChhheeeecccCCCCccccceee
Confidence 4578999999999999976554454444444
No 3
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=94.24 E-value=0.015 Score=40.66 Aligned_cols=31 Identities=32% Similarity=0.525 Sum_probs=20.5
Q ss_pred CCCccEEEecchhhhhccCCCCCCccchhhh
Q 035709 36 DKKALVVCFGELLIDFLPTESGVSLAKASAF 66 (75)
Q Consensus 36 ~~~~dVlcIGEaLIDFIP~~~G~sL~~v~sF 66 (75)
.+.++|++|||++||+++.....+...+..|
T Consensus 19 ~~~~~v~viG~~~~D~~~~~~~~p~~~~~~~ 49 (327)
T 3hj6_A 19 KGDLDVVSLGEILVDMISTEEVNSLSQSREY 49 (327)
T ss_dssp ---CCEEEESCCEEEEECCCCCSSGGGCCEE
T ss_pred cCCCCEEEEccceEEEeccCCCCCcccccee
Confidence 4567899999999999987654344443333
No 4
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=93.91 E-value=0.015 Score=41.11 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=17.7
Q ss_pred hHHHHHHhcCCCCCCCCCCCCCCccEEEecchhhhhccCCCC
Q 035709 16 DAQTYKKFNKLPADEEGQTPDKKALVVCFGELLIDFLPTESG 57 (75)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~dVlcIGEaLIDFIP~~~G 57 (75)
|-...++||-... ...+.++|+||||++||+++...|
T Consensus 9 ~~~~~~~~~~~~~-----~m~~~~~vlviG~~~iD~~~~~~g 45 (336)
T 4du5_A 9 SGVDLGTENLYFQ-----SMTSALDVITFGEAMMLLVADRPG 45 (336)
T ss_dssp ----------------------CEEEEEECCCEEEEEESSSS
T ss_pred ccccccchheeee-----ccCCCCCEEEEChhhhhccCCCCC
Confidence 3444677774422 234567999999999999998655
No 5
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=93.79 E-value=0.02 Score=40.20 Aligned_cols=19 Identities=32% Similarity=0.621 Sum_probs=16.1
Q ss_pred ccEEEecchhhhhccCCCC
Q 035709 39 ALVVCFGELLIDFLPTESG 57 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~~~G 57 (75)
.+|++|||++||++|...+
T Consensus 3 ~~v~viG~~~~D~~~~~~~ 21 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTPPEYL 21 (346)
T ss_dssp CEEEEECCCEEEEECSTTC
T ss_pred CcEEEeChhhhhhcCCCCC
Confidence 5799999999999986544
No 6
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=93.00 E-value=0.025 Score=39.24 Aligned_cols=19 Identities=47% Similarity=0.910 Sum_probs=16.5
Q ss_pred ccEEEecchhhhhccCCCC
Q 035709 39 ALVVCFGELLIDFLPTESG 57 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~~~G 57 (75)
.+|++|||++||+++...+
T Consensus 2 ~~v~viG~~~iD~~~~~~g 20 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEEG 20 (313)
T ss_dssp CEEEEESCCEEEEEESSSS
T ss_pred CcEEEECceeeeeecCCCC
Confidence 3799999999999997655
No 7
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=91.57 E-value=0.057 Score=37.81 Aligned_cols=21 Identities=43% Similarity=0.706 Sum_probs=17.0
Q ss_pred CCccEEEecchhhhhccCCCC
Q 035709 37 KKALVVCFGELLIDFLPTESG 57 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~~~G 57 (75)
+.++|+||||++||+++...+
T Consensus 3 ~~~~v~viG~~~iD~~~~~~~ 23 (338)
T 3ljs_A 3 LKKTILCFGEALIDMLAQPLV 23 (338)
T ss_dssp -CCEEEEESCCEEEEEECCCS
T ss_pred CCCCEEEEChhhhheeccCCC
Confidence 456899999999999987543
No 8
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=91.47 E-value=0.074 Score=36.91 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=17.2
Q ss_pred CCccEEEecchhhhhccCCCC
Q 035709 37 KKALVVCFGELLIDFLPTESG 57 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~~~G 57 (75)
+..+|+++|+++||+++...+
T Consensus 10 ~~~~i~viG~~~~D~~~~~~~ 30 (332)
T 2qcv_A 10 REFDLIAIGRACIDLNAVEYN 30 (332)
T ss_dssp CSEEEEEESCCEEEEEESSCS
T ss_pred cCCcEEEECcceEEEecCCCC
Confidence 346899999999999986543
No 9
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.22 E-value=0.078 Score=36.09 Aligned_cols=18 Identities=39% Similarity=0.658 Sum_probs=15.2
Q ss_pred CCccEEEecchhhhhccC
Q 035709 37 KKALVVCFGELLIDFLPT 54 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~ 54 (75)
+..+|++|||++||++|.
T Consensus 2 m~~~v~viG~~~~D~~p~ 19 (296)
T 2qhp_A 2 MNNIIVGMGEALWDVLPE 19 (296)
T ss_dssp -CCEEEEESCCEEEEETT
T ss_pred CcceEEEEchhheEecCC
Confidence 345899999999999985
No 10
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=88.82 E-value=0.13 Score=35.35 Aligned_cols=18 Identities=44% Similarity=0.702 Sum_probs=15.3
Q ss_pred cEEEecchhhhhccCCCC
Q 035709 40 LVVCFGELLIDFLPTESG 57 (75)
Q Consensus 40 dVlcIGEaLIDFIP~~~G 57 (75)
+|++|||++||+++...+
T Consensus 3 ~i~viG~~~~D~~~~~~~ 20 (309)
T 1v1a_A 3 EVVTAGEPLVALVPQEPG 20 (309)
T ss_dssp SEEEESCCEEEEECSSSS
T ss_pred cEEEEccceEEEecCCCC
Confidence 799999999999985443
No 11
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=88.67 E-value=0.13 Score=35.47 Aligned_cols=18 Identities=39% Similarity=0.591 Sum_probs=15.2
Q ss_pred cEEEecchhhhhccCCCC
Q 035709 40 LVVCFGELLIDFLPTESG 57 (75)
Q Consensus 40 dVlcIGEaLIDFIP~~~G 57 (75)
+|++||+++||+++...+
T Consensus 3 ~v~viG~~~~D~~~~~~~ 20 (313)
T 2v78_A 3 DVIALGEPLIQFNSFNPG 20 (313)
T ss_dssp CEEEECCCEEEEEESSSS
T ss_pred eEEEECcceEEEecCCCC
Confidence 699999999999985443
No 12
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=88.30 E-value=0.15 Score=35.49 Aligned_cols=18 Identities=22% Similarity=0.307 Sum_probs=15.0
Q ss_pred CccEEEecchhhhhccCC
Q 035709 38 KALVVCFGELLIDFLPTE 55 (75)
Q Consensus 38 ~~dVlcIGEaLIDFIP~~ 55 (75)
+.+|++|||++||++...
T Consensus 2 ~~~ilviG~~~iD~~~~~ 19 (313)
T 3kd6_A 2 SLSLLVIGSLAFDDIETP 19 (313)
T ss_dssp -CCEEEESCCEEEEEECS
T ss_pred CccEEEEeEEEEeeecCC
Confidence 457999999999999754
No 13
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=87.76 E-value=0.13 Score=35.62 Aligned_cols=18 Identities=17% Similarity=0.348 Sum_probs=14.5
Q ss_pred CccEEEecchhhhhccCC
Q 035709 38 KALVVCFGELLIDFLPTE 55 (75)
Q Consensus 38 ~~dVlcIGEaLIDFIP~~ 55 (75)
+++|++|||++||+++..
T Consensus 4 ~~~i~viG~~~~D~~~~~ 21 (319)
T 3lhx_A 4 SKKIAVIGECMIELSEKG 21 (319)
T ss_dssp CEEEEEESCCEEEEEC--
T ss_pred cCceeeechhhhhhccCC
Confidence 458999999999999853
No 14
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=87.72 E-value=0.16 Score=35.41 Aligned_cols=17 Identities=24% Similarity=0.530 Sum_probs=14.5
Q ss_pred CccEEEecchhhhhccC
Q 035709 38 KALVVCFGELLIDFLPT 54 (75)
Q Consensus 38 ~~dVlcIGEaLIDFIP~ 54 (75)
.++|+||||++||++..
T Consensus 5 ~~~v~~iG~~~~D~~~~ 21 (325)
T 3h49_A 5 NLDVICIGAAIVDIPLQ 21 (325)
T ss_dssp CEEEEEESCCEEEEEEC
T ss_pred CCeEEEEChhhheeecc
Confidence 47899999999999643
No 15
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=87.58 E-value=0.17 Score=34.82 Aligned_cols=19 Identities=37% Similarity=0.712 Sum_probs=15.6
Q ss_pred ccEEEecchhhhhccCCCC
Q 035709 39 ALVVCFGELLIDFLPTESG 57 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~~~G 57 (75)
.+|++||+++||+++...+
T Consensus 2 ~~v~viG~~~~D~~~~~~~ 20 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPG 20 (311)
T ss_dssp CEEEEESCCEEEEEESSSS
T ss_pred CCEEEECCceEEEecCCCC
Confidence 3799999999999985443
No 16
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=87.46 E-value=0.14 Score=35.78 Aligned_cols=17 Identities=24% Similarity=0.640 Sum_probs=14.8
Q ss_pred ccEEEecchhhhhccCC
Q 035709 39 ALVVCFGELLIDFLPTE 55 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~~ 55 (75)
++|++|||++||+++..
T Consensus 4 ~~i~viG~~~~D~~~~~ 20 (330)
T 3iq0_A 4 SKVFTIGEILVEIMASK 20 (330)
T ss_dssp CEEEEESCCEEEEEEEE
T ss_pred CCEEEEcceeEEEeccC
Confidence 47999999999999753
No 17
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=85.93 E-value=0.21 Score=35.15 Aligned_cols=18 Identities=17% Similarity=0.455 Sum_probs=15.9
Q ss_pred CCccEEEecchhhhhccC
Q 035709 37 KKALVVCFGELLIDFLPT 54 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~ 54 (75)
+.++|++|||++||+++.
T Consensus 22 ~m~~i~viG~~~iD~~~~ 39 (328)
T 4e69_A 22 SMMHILSIGECMAELAPA 39 (328)
T ss_dssp SSCEEEEESCCEEEEEEC
T ss_pred cCCcEEEecCcEEEEecC
Confidence 446899999999999996
No 18
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=81.48 E-value=0.41 Score=33.24 Aligned_cols=21 Identities=14% Similarity=0.493 Sum_probs=14.6
Q ss_pred CCCCCCccEEEecchhhhhcc
Q 035709 33 QTPDKKALVVCFGELLIDFLP 53 (75)
Q Consensus 33 ~~~~~~~dVlcIGEaLIDFIP 53 (75)
+-|.+..+|++|||++||++.
T Consensus 12 ~~~~~~~~i~viG~~~iD~~~ 32 (312)
T 2hlz_A 12 GLVPRGSQILCVGLVVLDVIS 32 (312)
T ss_dssp -----CCEEEEESCCEEEEEE
T ss_pred CCCCCCCcEEEECcceEEEee
Confidence 345556789999999999985
No 19
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=81.32 E-value=0.42 Score=33.47 Aligned_cols=19 Identities=16% Similarity=0.156 Sum_probs=15.0
Q ss_pred CCCccEEEecchhhhhccC
Q 035709 36 DKKALVVCFGELLIDFLPT 54 (75)
Q Consensus 36 ~~~~dVlcIGEaLIDFIP~ 54 (75)
-+.++|++||+++||++..
T Consensus 17 ~mm~~i~viG~~~iD~~~~ 35 (310)
T 3go6_A 17 PMAPRVCVVGSVNMDLTFV 35 (310)
T ss_dssp --CCEEEEECCCEEEEEEE
T ss_pred cccCCEEEECCceEEEEEe
Confidence 4567899999999999853
No 20
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=78.69 E-value=0.65 Score=33.25 Aligned_cols=19 Identities=16% Similarity=0.350 Sum_probs=16.1
Q ss_pred CCCccEEEecchhhhhccC
Q 035709 36 DKKALVVCFGELLIDFLPT 54 (75)
Q Consensus 36 ~~~~dVlcIGEaLIDFIP~ 54 (75)
.+..+|+|+|+++||++..
T Consensus 30 ~~~~~vlviG~~~lD~~~~ 48 (383)
T 2abs_A 30 TGPMRVFAIGNPILDLVAE 48 (383)
T ss_dssp CCCCCEEEECCCEEEEEEE
T ss_pred CCCceEEEECcchheeEec
Confidence 4457899999999999875
No 21
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=78.12 E-value=0.8 Score=32.10 Aligned_cols=20 Identities=30% Similarity=0.679 Sum_probs=16.5
Q ss_pred CCCccEEEecchhhhhccCC
Q 035709 36 DKKALVVCFGELLIDFLPTE 55 (75)
Q Consensus 36 ~~~~dVlcIGEaLIDFIP~~ 55 (75)
..+.+|++|||+|++|.+..
T Consensus 10 ~~~~~~~~~ge~l~~~~~~~ 29 (351)
T 2afb_A 10 HHHMKVVTFGEIMLRLSPPD 29 (351)
T ss_dssp CCCCEEEEESCCEEEEECST
T ss_pred cccceEEEechhhheecCCC
Confidence 34689999999999988743
No 22
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=76.47 E-value=0.71 Score=31.59 Aligned_cols=16 Identities=19% Similarity=0.355 Sum_probs=14.2
Q ss_pred ccEEEecchhhhhccC
Q 035709 39 ALVVCFGELLIDFLPT 54 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~ 54 (75)
.+|+++||++||++..
T Consensus 5 ~~v~viG~~~iD~~~~ 20 (309)
T 1rkd_A 5 GSLVVLGSINADHILN 20 (309)
T ss_dssp CEEEEECCCEEEEEEE
T ss_pred CeEEEECcceEeEEEe
Confidence 4799999999999864
No 23
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=75.78 E-value=0.9 Score=31.61 Aligned_cols=19 Identities=21% Similarity=0.490 Sum_probs=16.1
Q ss_pred CCccEEEecchhhhhccCC
Q 035709 37 KKALVVCFGELLIDFLPTE 55 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~~ 55 (75)
+..+|++||+++||++...
T Consensus 5 ~~~~v~viG~~~vD~~~~~ 23 (328)
T 3kzh_A 5 KEPYLLVFGASVVDVFGFS 23 (328)
T ss_dssp CCCCEEEECCCEEEEEEEE
T ss_pred CCCcEEEECcEEeeeeecc
Confidence 4578999999999999754
No 24
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=75.25 E-value=0.81 Score=31.99 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.1
Q ss_pred ccEEEecchhhhhccC
Q 035709 39 ALVVCFGELLIDFLPT 54 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~ 54 (75)
.+|++|||++||++..
T Consensus 25 ~~vlviG~~~iD~~~~ 40 (331)
T 2fv7_A 25 AAVVVVGSCMTDLVSL 40 (331)
T ss_dssp CSEEEECCCEEEEEEE
T ss_pred CCEEEECcccEEEEEe
Confidence 4799999999999864
No 25
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=75.14 E-value=0.76 Score=31.84 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=14.1
Q ss_pred ccEEEecchhhhhccC
Q 035709 39 ALVVCFGELLIDFLPT 54 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~ 54 (75)
.+|++|||++||++..
T Consensus 4 ~~i~viG~~~~D~~~~ 19 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGM 19 (317)
T ss_dssp CEEEEESCCEEEEEEE
T ss_pred CeEEEECchheEEeec
Confidence 4799999999999864
No 26
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=73.57 E-value=0.9 Score=32.05 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=14.5
Q ss_pred ccEEEecchhhhhccC
Q 035709 39 ALVVCFGELLIDFLPT 54 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~ 54 (75)
.+|++||+++||+++.
T Consensus 25 ~~ilviG~~~~D~~~~ 40 (339)
T 1tyy_A 25 NKVWVIGDASVDLVPE 40 (339)
T ss_dssp CCEEEESCCEEEEEEC
T ss_pred CCEEEECcceeEEecc
Confidence 3799999999999985
No 27
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=67.80 E-value=1.6 Score=30.09 Aligned_cols=17 Identities=18% Similarity=0.098 Sum_probs=14.7
Q ss_pred CccEEEecchhhhhccC
Q 035709 38 KALVVCFGELLIDFLPT 54 (75)
Q Consensus 38 ~~dVlcIGEaLIDFIP~ 54 (75)
+.+|+++|+++||++..
T Consensus 2 ~~~i~viG~~~iD~~~~ 18 (299)
T 3ikh_A 2 SLRVYVTGNITVDETWS 18 (299)
T ss_dssp CCCEEEECCCEEEEEEE
T ss_pred CceEEEECceEEEEEEe
Confidence 46899999999999853
No 28
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=67.14 E-value=1.7 Score=30.85 Aligned_cols=15 Identities=33% Similarity=0.605 Sum_probs=13.5
Q ss_pred ccEEEecchhhhhcc
Q 035709 39 ALVVCFGELLIDFLP 53 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP 53 (75)
.+|++||+++||++.
T Consensus 30 ~~i~viG~~~iD~~~ 44 (343)
T 2rbc_A 30 KHVLCVGAAVLDTLF 44 (343)
T ss_dssp CEEEEESCCEEEEEE
T ss_pred CeEEEECcceEEEEe
Confidence 579999999999984
No 29
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=66.28 E-value=1.6 Score=29.62 Aligned_cols=15 Identities=27% Similarity=0.284 Sum_probs=13.6
Q ss_pred ccEEEecchhhhhcc
Q 035709 39 ALVVCFGELLIDFLP 53 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP 53 (75)
.+|++||+++||++.
T Consensus 3 ~~v~viG~~~~D~~~ 17 (304)
T 3ry7_A 3 NKVVILGSTNVDQFL 17 (304)
T ss_dssp CEEEEECCCEEEEEE
T ss_pred CcEEEEccceeEEEE
Confidence 579999999999985
No 30
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=64.48 E-value=1.8 Score=30.12 Aligned_cols=18 Identities=33% Similarity=0.501 Sum_probs=15.2
Q ss_pred CCccEEEecchhhhhccC
Q 035709 37 KKALVVCFGELLIDFLPT 54 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~ 54 (75)
...+|+++|+++||++..
T Consensus 19 ~~~~v~viG~~~iD~~~~ 36 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLIS 36 (306)
T ss_dssp CCEEEEEECCCEEEEEEE
T ss_pred CCCcEEEECCceEEEEEe
Confidence 346899999999999864
No 31
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=61.53 E-value=2.1 Score=29.31 Aligned_cols=15 Identities=20% Similarity=0.649 Sum_probs=13.5
Q ss_pred cEEEecchhhhhccC
Q 035709 40 LVVCFGELLIDFLPT 54 (75)
Q Consensus 40 dVlcIGEaLIDFIP~ 54 (75)
+|+++|+++||++..
T Consensus 7 ~i~viG~~~iD~~~~ 21 (302)
T 2c4e_A 7 KITCVGHTALDYIFN 21 (302)
T ss_dssp EEEEESCCEEEEEEE
T ss_pred cEEEECceeEEEEec
Confidence 799999999999863
No 32
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=60.90 E-value=2.8 Score=29.37 Aligned_cols=16 Identities=19% Similarity=0.268 Sum_probs=14.3
Q ss_pred ccEEEecchhhhhccC
Q 035709 39 ALVVCFGELLIDFLPT 54 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~ 54 (75)
.+|+++|+++||++..
T Consensus 11 m~i~v~G~~~~D~~~~ 26 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMR 26 (334)
T ss_dssp SEEEEESCCEEEEEEE
T ss_pred CeEEEECChhheEEEe
Confidence 5899999999999864
No 33
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=58.46 E-value=3.1 Score=28.89 Aligned_cols=18 Identities=17% Similarity=0.442 Sum_probs=15.6
Q ss_pred CCccEEEecchhhhhccC
Q 035709 37 KKALVVCFGELLIDFLPT 54 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~ 54 (75)
+..+|+++|+++||++..
T Consensus 5 ~~~~v~viG~~~~D~~~~ 22 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAV 22 (345)
T ss_dssp CTTCEEEECCCEEEEEEE
T ss_pred ccccEEEECCcceeEEEe
Confidence 456899999999999875
No 34
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=58.18 E-value=2.8 Score=29.80 Aligned_cols=18 Identities=17% Similarity=0.412 Sum_probs=15.5
Q ss_pred CCccEEEecchhhhhccC
Q 035709 37 KKALVVCFGELLIDFLPT 54 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~ 54 (75)
+.++|++||.+++|.+..
T Consensus 24 ~~~~v~~iG~~~vD~~~~ 41 (352)
T 4e3a_A 24 TRFDVLTVGNAIVDIISR 41 (352)
T ss_dssp CSEEEEEECCCEEEEEEE
T ss_pred CcccEEEECCceeeEEEe
Confidence 358999999999999764
No 35
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=54.24 E-value=3.6 Score=29.41 Aligned_cols=18 Identities=17% Similarity=0.292 Sum_probs=14.9
Q ss_pred CCCccEEEecchhhhhcc
Q 035709 36 DKKALVVCFGELLIDFLP 53 (75)
Q Consensus 36 ~~~~dVlcIGEaLIDFIP 53 (75)
-+..+|++||++.||.+.
T Consensus 51 ~~~~~ilvvG~~~~D~~~ 68 (352)
T 4e84_A 51 LARSRVLVVGDVMLDRYW 68 (352)
T ss_dssp HTTCEEEEEECEEEEEEE
T ss_pred cCCCcEEEECccceEEEE
Confidence 345789999999999864
No 36
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=45.99 E-value=12 Score=23.30 Aligned_cols=32 Identities=16% Similarity=0.424 Sum_probs=23.7
Q ss_pred HHHhhhHHHHHHhcCCCCCCCCCCCCCCccEEEecchhhh
Q 035709 11 AEQRRDAQTYKKFNKLPADEEGQTPDKKALVVCFGELLID 50 (75)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVlcIGEaLID 50 (75)
.++.+-.+.|.+||+.| ....+|+++|..+..
T Consensus 15 ~~~~~~~~~~~~~~~~~--------~~~~~i~~~GDSit~ 46 (214)
T 2hsj_A 15 KEQEKIQTKYRHLNHIS--------VVEPNILFIGDSIVE 46 (214)
T ss_dssp HHHHHHHHHHHHHHHHC--------SSCCSEEEEESHHHH
T ss_pred HHHHHHHHHHHHhhhcc--------cccCCEEEEecchhc
Confidence 34566667788888874 455789999998865
No 37
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=44.77 E-value=5.9 Score=27.65 Aligned_cols=15 Identities=20% Similarity=0.244 Sum_probs=13.5
Q ss_pred cEEEecchhhhhccC
Q 035709 40 LVVCFGELLIDFLPT 54 (75)
Q Consensus 40 dVlcIGEaLIDFIP~ 54 (75)
+|+++|+++||++..
T Consensus 2 ~i~v~G~~~iD~~~~ 16 (326)
T 3b1n_A 2 ATLICGSIAYDNIMT 16 (326)
T ss_dssp CEEEESCCEEEEEEE
T ss_pred cEEEECcceEEEEEe
Confidence 699999999999964
No 38
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=42.22 E-value=8.1 Score=26.87 Aligned_cols=19 Identities=16% Similarity=-0.006 Sum_probs=16.3
Q ss_pred CCccEEEecchhhhhccCC
Q 035709 37 KKALVVCFGELLIDFLPTE 55 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~~ 55 (75)
+.++|+++|-+++|.+..-
T Consensus 6 ~~~~v~~iG~~~lD~~~~v 24 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHV 24 (347)
T ss_dssp CCCCEEEECCCEEEEEEEC
T ss_pred CCCcEEEECCceeeEEEec
Confidence 5678999999999998753
No 39
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=39.33 E-value=10 Score=27.04 Aligned_cols=16 Identities=25% Similarity=0.466 Sum_probs=14.0
Q ss_pred ccEEEecchhhhhccC
Q 035709 39 ALVVCFGELLIDFLPT 54 (75)
Q Consensus 39 ~dVlcIGEaLIDFIP~ 54 (75)
..|++||-+|+|.+..
T Consensus 27 ~~v~giGnalvDi~~~ 42 (372)
T 3uq6_A 27 GYVFGMGNPLLDIIVD 42 (372)
T ss_dssp TCEEEEECCEEEEEEE
T ss_pred CeEEEECCceeeEEEE
Confidence 4699999999999874
No 40
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=32.96 E-value=13 Score=26.49 Aligned_cols=18 Identities=22% Similarity=0.436 Sum_probs=15.7
Q ss_pred CccEEEecchhhhhccCC
Q 035709 38 KALVVCFGELLIDFLPTE 55 (75)
Q Consensus 38 ~~dVlcIGEaLIDFIP~~ 55 (75)
..+|++||-++||.+..-
T Consensus 24 ~~~v~~iG~~~vD~~~~v 41 (370)
T 3vas_A 24 EGYVFGMGNPLLDIIVDA 41 (370)
T ss_dssp TTCEEEEECCEEEEEEEC
T ss_pred CccEEEECCcceeEEEec
Confidence 578999999999998753
No 41
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=30.52 E-value=17 Score=25.70 Aligned_cols=20 Identities=20% Similarity=0.363 Sum_probs=16.3
Q ss_pred CCCccEEEecchhhhhccCC
Q 035709 36 DKKALVVCFGELLIDFLPTE 55 (75)
Q Consensus 36 ~~~~dVlcIGEaLIDFIP~~ 55 (75)
-..++|+++|-+++|.+..-
T Consensus 21 ~~~~~v~~iG~~~vD~~~~v 40 (365)
T 3loo_A 21 LRDGMLVGLGNPLLDISAVV 40 (365)
T ss_dssp CCTTSEEEECCCEEEEEEEC
T ss_pred CCCccEEEECCCeEeEEEec
Confidence 34568999999999998753
No 42
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=27.52 E-value=18 Score=25.76 Aligned_cols=17 Identities=29% Similarity=0.319 Sum_probs=14.4
Q ss_pred CccEEEecchhhhhccC
Q 035709 38 KALVVCFGELLIDFLPT 54 (75)
Q Consensus 38 ~~dVlcIGEaLIDFIP~ 54 (75)
++.|++|||+=+|+...
T Consensus 89 ~~~vvaIGEiGLD~~~~ 105 (287)
T 3rcm_A 89 EPRVRAVGECGLDFNRD 105 (287)
T ss_dssp STTEEEEEEEEEETTTC
T ss_pred CCCeEEEEEeeeCCCcc
Confidence 35799999999999764
No 43
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=25.19 E-value=5.8 Score=25.47 Aligned_cols=15 Identities=27% Similarity=0.361 Sum_probs=11.9
Q ss_pred CCccEEEecchhhhh
Q 035709 37 KKALVVCFGELLIDF 51 (75)
Q Consensus 37 ~~~dVlcIGEaLIDF 51 (75)
+..+|+++|..+++.
T Consensus 25 ~~~~Iv~~GDSit~g 39 (209)
T 4hf7_A 25 KEKRVVFMGNXITEG 39 (209)
T ss_dssp GGCCEEEEESHHHHH
T ss_pred CCCeEEEECcHHHhC
Confidence 345799999998864
No 44
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=24.17 E-value=22 Score=24.47 Aligned_cols=18 Identities=17% Similarity=0.170 Sum_probs=14.8
Q ss_pred CCccEEEecchhhhhccC
Q 035709 37 KKALVVCFGELLIDFLPT 54 (75)
Q Consensus 37 ~~~dVlcIGEaLIDFIP~ 54 (75)
.-.+|+++|.+.||++-.
T Consensus 13 ~~~~v~vvG~~~iD~~~~ 30 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLK 30 (311)
T ss_dssp CCCCEEEECCCEEEEEEE
T ss_pred ccCCEEEECcceeeEEEe
Confidence 346899999999998754
No 45
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=22.83 E-value=27 Score=25.17 Aligned_cols=34 Identities=29% Similarity=0.464 Sum_probs=19.5
Q ss_pred hHHHhh-----hHHHHHHhcCCCCCCCCCCCCCCccEEEecchhhh
Q 035709 10 HAEQRR-----DAQTYKKFNKLPADEEGQTPDKKALVVCFGELLID 50 (75)
Q Consensus 10 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dVlcIGEaLID 50 (75)
|.|.|+ |...-+|+.. |-+.|-+ -|+|+||.|=.
T Consensus 89 HSERR~~f~Etd~~v~~Kv~~--Al~~GL~-----pI~CvGEtlee 127 (244)
T 2v5b_A 89 HSERRLYYGETNEIVAEKVAQ--ACAAGFH-----VIVCVGETNEE 127 (244)
T ss_dssp CHHHHHHSCCCHHHHHHHHHH--HHHTTCE-----EEEEECCCHHH
T ss_pred chhhhhccCCCHHHHHHHHHH--HHHCCCe-----EEEEcCCcHHH
Confidence 677775 3444444443 1223333 49999999854
No 46
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=22.04 E-value=29 Score=25.63 Aligned_cols=11 Identities=45% Similarity=0.927 Sum_probs=8.9
Q ss_pred cEEEecchhhh
Q 035709 40 LVVCFGELLID 50 (75)
Q Consensus 40 dVlcIGEaLID 50 (75)
-|+|+||.|=+
T Consensus 148 pIlCVGEtlee 158 (272)
T 4g1k_A 148 PIVCVGETLAE 158 (272)
T ss_dssp EEEEECCCHHH
T ss_pred EEEEeCCCHHH
Confidence 49999999843
No 47
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=21.44 E-value=30 Score=25.61 Aligned_cols=10 Identities=40% Similarity=0.850 Sum_probs=8.5
Q ss_pred cEEEecchhh
Q 035709 40 LVVCFGELLI 49 (75)
Q Consensus 40 dVlcIGEaLI 49 (75)
-|+|+||.|=
T Consensus 148 pIlCVGEtle 157 (275)
T 3kxq_A 148 ALICVGETLE 157 (275)
T ss_dssp EEEEECCCHH
T ss_pred EEEEeCCCHH
Confidence 4999999974
No 48
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=20.24 E-value=33 Score=25.19 Aligned_cols=11 Identities=45% Similarity=0.676 Sum_probs=9.1
Q ss_pred cEEEecchhhh
Q 035709 40 LVVCFGELLID 50 (75)
Q Consensus 40 dVlcIGEaLID 50 (75)
-|+|+||.|-+
T Consensus 128 pIlCvGEtlee 138 (267)
T 3ta6_A 128 PIVCIGEHLDV 138 (267)
T ss_dssp EEEEECCCHHH
T ss_pred EEEEeCCCHHH
Confidence 49999999844
No 49
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=20.16 E-value=33 Score=24.90 Aligned_cols=10 Identities=30% Similarity=0.590 Sum_probs=8.5
Q ss_pred cEEEecchhh
Q 035709 40 LVVCFGELLI 49 (75)
Q Consensus 40 dVlcIGEaLI 49 (75)
-|+|+||.|=
T Consensus 126 pIlCvGEtle 135 (254)
T 3m9y_A 126 PIICVGETDE 135 (254)
T ss_dssp EEEEECCCHH
T ss_pred EEEEcCCcHH
Confidence 4999999974
Done!