Query 035711
Match_columns 82
No_of_seqs 18 out of 20
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 09:07:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035711.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035711hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3dtub2 f.17.2.1 (B:30-129) Ba 50.6 4.8 0.00035 23.5 2.3 25 9-33 35-59 (100)
2 d1kf6c_ f.21.2.2 (C:) Fumarate 38.9 9.6 0.0007 24.8 2.6 20 8-27 32-51 (130)
3 d1fftb2 f.17.2.1 (B:27-117) Cy 37.3 2.9 0.00021 24.4 -0.3 24 10-33 25-48 (91)
4 d2q7ra1 f.56.1.1 (A:1-139) Ara 36.9 1.6 0.00012 27.6 -1.6 26 18-44 23-48 (139)
5 d3cx5h1 f.23.13.1 (H:2-94) Ubi 26.1 6.8 0.00049 24.2 0.0 30 5-34 56-88 (93)
6 d2uuia1 f.56.1.1 (A:2-147) Leu 25.1 15 0.0011 22.9 1.7 22 22-44 22-43 (146)
7 d2nwwa1 f.49.1.1 (A:12-416) Pr 24.5 25 0.0018 24.1 2.8 23 9-31 141-163 (405)
8 d3ehbb2 f.17.2.1 (B:1-107) Bac 23.4 27 0.0019 20.4 2.5 23 11-33 43-65 (107)
9 d1eg1a_ b.29.1.10 (A:) Cellobi 18.7 16 0.0012 27.3 0.8 8 2-9 312-319 (371)
10 d1ojja_ b.29.1.10 (A:) Cellobi 18.1 17 0.0012 27.4 0.8 8 2-9 339-346 (399)
No 1
>d3dtub2 f.17.2.1 (B:30-129) Bacterial aa3 type cytochrome c oxidase subunit II {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=50.61 E-value=4.8 Score=23.48 Aligned_cols=25 Identities=8% Similarity=0.044 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHHHhhhhhccccccc
Q 035711 9 LPLILFSLLLGFGCYYLGRARGRQD 33 (82)
Q Consensus 9 LP~I~f~llLgfGcYflGr~rGR~E 33 (82)
+-.++++++.+.-+|++=|+|.|++
T Consensus 35 i~~~I~~~V~~~l~~~~~~~r~~~~ 59 (100)
T d3dtub2 35 IIAAITIFVTLLILYAVWRFHEKRN 59 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHBTTTC
T ss_pred HHHHHHHHHHHHHHHHhhhhhccCC
Confidence 3456788899999999999998875
No 2
>d1kf6c_ f.21.2.2 (C:) Fumarate reductase subunit FrdC {Escherichia coli [TaxId: 562]}
Probab=38.90 E-value=9.6 Score=24.83 Aligned_cols=20 Identities=35% Similarity=0.644 Sum_probs=17.7
Q ss_pred hhhHHHHHHHHHHHhhhhhc
Q 035711 8 SLPLILFSLLLGFGCYYLGR 27 (82)
Q Consensus 8 SLP~I~f~llLgfGcYflGr 27 (82)
|+|.++||++|-+|.+-|++
T Consensus 32 ~v~~~~f~lvLl~Gl~~L~~ 51 (130)
T d1kf6c_ 32 AVPAVWFSIELIFGLFALKN 51 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 78999999999999888765
No 3
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=37.26 E-value=2.9 Score=24.42 Aligned_cols=24 Identities=13% Similarity=0.076 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHhhhhhccccccc
Q 035711 10 PLILFSLLLGFGCYYLGRARGRQD 33 (82)
Q Consensus 10 P~I~f~llLgfGcYflGr~rGR~E 33 (82)
=.++|+++.++-+|++=|.|.|++
T Consensus 25 ~~iv~v~V~~~~~~~~~ryR~~~~ 48 (91)
T d1fftb2 25 MLIVVIPAILMAVGFAWKYRASNK 48 (91)
T ss_dssp TTTTTTHHHHHHHTTTTTTTTSTT
T ss_pred HHHHHHHHHHHHHhhheeeeccCC
Confidence 346677888999999999987754
No 4
>d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating protein, FLAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.92 E-value=1.6 Score=27.63 Aligned_cols=26 Identities=19% Similarity=0.027 Sum_probs=15.6
Q ss_pred HHHHhhhhhccccccccccCCccccCC
Q 035711 18 LGFGCYYLGRARGRQDIRTNPQVFGVP 44 (82)
Q Consensus 18 LgfGcYflGr~rGR~E~~t~~QvyG~P 44 (82)
..+-.+-.||.|.|..+ .-++.||+|
T Consensus 23 ~~~ls~~Vg~aR~k~~v-~~p~~~g~~ 48 (139)
T d2q7ra1 23 NGFFAHKVEHESRTQNG-RSFQRTGTL 48 (139)
T ss_dssp HHHHHHHHHHHHHHSCC-SSCCSCCCH
T ss_pred HHHHHHHHHHHHhCCCC-CCCCCCCCH
Confidence 33444557888888877 335555554
No 5
>d3cx5h1 f.23.13.1 (H:2-94) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.11 E-value=6.8 Score=24.25 Aligned_cols=30 Identities=17% Similarity=0.334 Sum_probs=19.8
Q ss_pred EEehhhHHHHHHHHHHHhh---hhhcccccccc
Q 035711 5 VVISLPLILFSLLLGFGCY---YLGRARGRQDI 34 (82)
Q Consensus 5 lVISLP~I~f~llLgfGcY---flGr~rGR~E~ 34 (82)
+++..|||++-++..-+-= ++-++.||+|.
T Consensus 56 lyv~PPfi~~Y~iy~Wa~~~ne~l~sK~Gr~e~ 88 (93)
T d3cx5h1 56 LYVLIPAGIYWYWWKNGNEYNEFLYSKAGREEL 88 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSGGGHHHH
T ss_pred eEEcchHHHHHHHHHHHHHHHHHHHcccCHHHH
Confidence 3456777766666544332 67788999995
No 6
>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.09 E-value=15 Score=22.93 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=14.9
Q ss_pred hhhhhccccccccccCCccccCC
Q 035711 22 CYYLGRARGRQDIRTNPQVFGVP 44 (82)
Q Consensus 22 cYflGr~rGR~E~~t~~QvyG~P 44 (82)
.+-.||.|.+.++ .-|+.||+|
T Consensus 22 s~~V~~~R~k~kv-~~p~~~g~~ 43 (146)
T d2uuia1 22 SLQVISARRAFRV-SPPLTTGPP 43 (146)
T ss_dssp HHHHHHHHHHTTC-CSSCCCCSH
T ss_pred HHHHHHHHHhcCC-CCCCCCCCH
Confidence 3457888888777 446677654
No 7
>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.49 E-value=25 Score=24.12 Aligned_cols=23 Identities=35% Similarity=0.725 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHHhhhhhccccc
Q 035711 9 LPLILFSLLLGFGCYYLGRARGR 31 (82)
Q Consensus 9 LP~I~f~llLgfGcYflGr~rGR 31 (82)
++.|+|++++|++.-.+.+..++
T Consensus 141 l~vi~fail~Gial~~~~~~~~~ 163 (405)
T d2nwwa1 141 LPTIFFAIILGIAITYLMNSENE 163 (405)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCT
T ss_pred cchhhHHHHHHHHHHHhcccchh
Confidence 68899999999998887766554
No 8
>d3ehbb2 f.17.2.1 (B:1-107) Bacterial aa3 type cytochrome c oxidase subunit II {Paracoccus denitrificans [TaxId: 266]}
Probab=23.45 E-value=27 Score=20.42 Aligned_cols=23 Identities=9% Similarity=-0.050 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhhhhhccccccc
Q 035711 11 LILFSLLLGFGCYYLGRARGRQD 33 (82)
Q Consensus 11 ~I~f~llLgfGcYflGr~rGR~E 33 (82)
.++++++.+.-+|++=|+|.|+.
T Consensus 43 ~~I~~~V~~~~~~~~~~~r~~~~ 65 (107)
T d3ehbb2 43 TAVTIFVCLLLLICIVRFNRRAN 65 (107)
T ss_dssp HHHHHHHHHHHHHHHHHSBTTTS
T ss_pred HHHHHHHHHHHHHHhhhhhccCC
Confidence 45677888888999998887754
No 9
>d1eg1a_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Trichoderma reesei, Endoglucanase I [TaxId: 51453]}
Probab=18.71 E-value=16 Score=27.29 Aligned_cols=8 Identities=63% Similarity=1.061 Sum_probs=7.2
Q ss_pred ceEEEehh
Q 035711 2 GMVVVISL 9 (82)
Q Consensus 2 G~vlVISL 9 (82)
|||||.||
T Consensus 312 GmVLv~Sl 319 (371)
T d1eg1a_ 312 GMVLVFSI 319 (371)
T ss_dssp CBEEEEEE
T ss_pred CeEEEEEE
Confidence 89999997
No 10
>d1ojja_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Humicola insolens, Cel7b [TaxId: 34413]}
Probab=18.09 E-value=17 Score=27.37 Aligned_cols=8 Identities=50% Similarity=0.987 Sum_probs=7.4
Q ss_pred ceEEEehh
Q 035711 2 GMVVVISL 9 (82)
Q Consensus 2 G~vlVISL 9 (82)
|||||.||
T Consensus 339 GmVLv~Si 346 (399)
T d1ojja_ 339 GMVLAMSI 346 (399)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 89999998
Done!