BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035712
(563 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y222|DMTF1_HUMAN Cyclin-D-binding Myb-like transcription factor 1 OS=Homo sapiens
GN=DMTF1 PE=1 SV=1
Length = 760
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 99/186 (53%), Gaps = 14/186 (7%)
Query: 376 FSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCRSHPEVKHCWKEIGSALPWRPYDSIYY 435
+SKEE +++ + Y++ G+ + ++ S E K ++ I L RP ++Y
Sbjct: 156 WSKEEIDILMNNIERYLKARGIKDA--TEIIFEMSKDERKDFYRTIAWGLN-RPLFAVYR 212
Query: 436 RAHIIFQ-RDENRKWTPEELELVRKFHEKHGSNWKMLANALGKHRFHVKDAWRRVRLPNQ 494
R ++ R+ K+TPEE+E +++ KHG++W + ALG+ VKD R ++
Sbjct: 213 RVLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMK-DTC 271
Query: 495 KKGQWSQEEYQKLFDLVNMDLRMRALEEKKTKHG-MLRDNISWEAISDKLATRSNAICCM 553
G+W++EE ++L ++V+ E T+ G ++ +SW A+++++ TRS C
Sbjct: 272 NTGKWTEEEEKRLAEVVH--------ELTSTEPGDIVTQGVSWAAVAERVGTRSEKQCRS 323
Query: 554 KWYDQL 559
KW + L
Sbjct: 324 KWLNYL 329
>sp|Q8CE22|DMTF1_MOUSE Cyclin-D-binding Myb-like transcription factor 1 OS=Mus musculus
GN=Dmtf1 PE=1 SV=2
Length = 761
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 99/186 (53%), Gaps = 14/186 (7%)
Query: 376 FSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCRSHPEVKHCWKEIGSALPWRPYDSIYY 435
+SKEE +++ + Y++ G+ + ++ S E K ++ I L RP ++Y
Sbjct: 156 WSKEEIDILMNNIERYLKARGIKDA--TEIIFEMSKDERKDFYRTIAWGLN-RPLFAVYR 212
Query: 436 RAHIIFQ-RDENRKWTPEELELVRKFHEKHGSNWKMLANALGKHRFHVKDAWRRVRLPNQ 494
R ++ R+ K+TPEE+E +++ KHG++W + ALG+ VKD R ++
Sbjct: 213 RVLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMK-DTC 271
Query: 495 KKGQWSQEEYQKLFDLVNMDLRMRALEEKKTKHG-MLRDNISWEAISDKLATRSNAICCM 553
G+W++EE ++L ++V+ E T+ G ++ +SW A+++++ TRS C
Sbjct: 272 NTGKWTEEEEKRLAEVVH--------ELTSTEPGDIVTQGVSWAAVAERVGTRSEKQCRS 323
Query: 554 KWYDQL 559
KW + L
Sbjct: 324 KWLNYL 329
>sp|Q66HG1|DMTF1_RAT Cyclin-D-binding Myb-like transcription factor 1 OS=Rattus
norvegicus GN=Dmtf1 PE=2 SV=2
Length = 760
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 99/186 (53%), Gaps = 14/186 (7%)
Query: 376 FSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCRSHPEVKHCWKEIGSALPWRPYDSIYY 435
+SKEE +++ + Y++ G+ + ++ S E K ++ I L RP ++Y
Sbjct: 156 WSKEEIDILMNNIERYLKARGIKDA--TEIIFEMSKDERKDFYRTIAWGLN-RPLFAVYR 212
Query: 436 RAHIIFQ-RDENRKWTPEELELVRKFHEKHGSNWKMLANALGKHRFHVKDAWRRVRLPNQ 494
R ++ R+ K+TPEE+E +++ KHG++W + ALG+ VKD R ++
Sbjct: 213 RVLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMK-DTC 271
Query: 495 KKGQWSQEEYQKLFDLVNMDLRMRALEEKKTKHG-MLRDNISWEAISDKLATRSNAICCM 553
G+W++EE ++L ++V+ E T+ G ++ +SW A+++++ TRS C
Sbjct: 272 NTGKWTEEEEKRLAEVVH--------ELTSTEPGDIVTQGVSWAAVAERVGTRSEKQCRS 323
Query: 554 KWYDQL 559
KW + L
Sbjct: 324 KWLNYL 329
>sp|Q12457|YD026_YEAST Myb domain-containing protein YDR026C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YDR026C PE=1 SV=1
Length = 570
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 102/239 (42%), Gaps = 40/239 (16%)
Query: 353 DVQVFPSSDAKNGKDDGFVR---GKRFSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCR 409
D + S K DG + GK+F+ E+ + + + Y++ GL + +
Sbjct: 248 DTALLRSDIVKASVIDGAITKSIGKKFTPSEENALDQFIEEYMKIRGLDRRQMCERIWST 307
Query: 410 SHPEVKHCWKEIGSALPWRPYDSIY----YRAHIIFQRDENRKWTPEE-LELVRKFHEKH 464
W I LP+R SIY + HI QR KWTPEE EL R EK
Sbjct: 308 DGVIRDGFWANISKVLPYRTRSSIYKHIRRKYHIFEQRG---KWTPEEDQELARLCLEKE 364
Query: 465 GSNWKMLANALGKHRFHVKDAWRRVRLPNQKKG--QWSQEEYQKLFDLVNMDL------- 515
G +W + LG+ +D WR K+G +WS+EE + L +VN +
Sbjct: 365 G-HWTEVGKLLGRMPEDCRDRWRNYMKCGSKRGSKRWSKEEEELLTTVVNEMIEEAHQYQ 423
Query: 516 RMRALE------------------EKKTKHGMLRDNISWEAISDKLA-TRSNAICCMKW 555
RM+ALE ++ + + +D I+W +S++++ TRS C KW
Sbjct: 424 RMKALEAANKNDRYNQMYSRGPKGKRISDNPTFKDMINWTVVSERMSGTRSRIQCRYKW 482
>sp|Q6DG03|DMTF1_DANRE Cyclin-D-binding Myb-like transcription factor 1 OS=Danio rerio
GN=dmtf1 PE=2 SV=1
Length = 645
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 376 FSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCRSHPEVKHCWKEIGSALPWRPYDSIYY 435
+SKEE +++ + Y++ G+ + ++ S E K ++ I L RP ++Y
Sbjct: 150 WSKEEIDLLMTNIELYLKNRGIQDPA--EIIFEMSKEERKDFYRSIACGLN-RPLFAVYR 206
Query: 436 RAHIIF-QRDENRKWTPEELELVRKFHEKHGSNWKMLANALGKHRFHVKDAWRRVRLPNQ 494
R ++ R+ K+T EE+ +++ +KHG++W + +ALG+ VKD R RL
Sbjct: 207 RVLRMYDNRNHVGKYTDEEINKLKELRQKHGNDWATIGSALGRSASSVKD---RCRLMKD 263
Query: 495 K--KGQWSQEEYQKLFDLVNMDLRMRALEEKKTKHG-MLRDNISWEAISDKLATRSNAIC 551
G+W++EE ++L ++V+ E T+ G ++ +SW ++++ + TRS C
Sbjct: 264 TCNTGKWTEEEERRLAEVVH--------ELTGTEAGDVVTQGVSWASVAELVGTRSEKQC 315
Query: 552 CMKWYDQL 559
KW + L
Sbjct: 316 RSKWLNYL 323
>sp|Q62187|TTF1_MOUSE Transcription termination factor 1 OS=Mus musculus GN=Ttf1 PE=1
SV=2
Length = 859
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 371 VRGKRFSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCRSHPE---------VKHCWK-E 420
+R +FS +E++ I++ V +++ G+ E + +L+ +PE KH ++
Sbjct: 507 IRFGKFSAKENKQIEKNVQDFLSLTGI--ESADKLLYTDRYPEEKTLITNLKRKHAFRLH 564
Query: 421 IGSALPWRPYDSIYYRAHIIFQRDENR-KWTPEELELVRKFHEKHGSNWKMLANALGKHR 479
IG + RP+ +YYRA IF + + ++ E+ + ++ +H HG++WK + + +
Sbjct: 565 IGKGIA-RPWKLVYYRAKKIFDVNNYKGRYNEEDTKKLKAYHSLHGNDWKKIGAMVARSS 623
Query: 480 FHVKDAWRRVRLPNQKKGQWSQEEYQKLFDLVN------------MDLRMRALEEKKTKH 527
V + ++ + +G WS+ E Q+L V +L + E+ + +
Sbjct: 624 LSVALKFSQIG-GTRNQGAWSKAETQRLIKAVEDVILKKMSPQELRELDSKLQEDPEGRL 682
Query: 528 GMLRD----NISWEAISDKLATRSNAICCMKWYDQLTSPM 563
++R+ ISW + ++ TR+ C KW + LT M
Sbjct: 683 SIVREKLYKGISWVEVEARVETRNWMQCKSKWTEILTKRM 722
>sp|O14108|ETA2_SCHPO DNA-binding protein eta2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=eta2 PE=1 SV=1
Length = 569
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 33/205 (16%)
Query: 376 FSKEEDEMIKRAVMNYIETHG--LGEEGLNMVLHCRSHPEVKHCWKEIGSALPWRPYDSI 433
FS E+ ++I++ V++Y G L E G M H + + E+ LP SI
Sbjct: 251 FSLEDAQVIQKVVLSYCNNEGVDLQEFGFRMSSSSLRHTNINFLYNELRELLP----TSI 306
Query: 434 YYRAHIIFQRD--------ENRKWTPEELELVRKFHEKHGSNWKMLANALGKHRFHVKDA 485
+ I + ++ + W EL+ + E+ G+ W +AN LG
Sbjct: 307 SRKGIIRYLKEIYKPLDPKDRNAWEESELKKLYTLVEQEGTRWNSIANKLGTSPAACMSQ 366
Query: 486 WRRVRLPNQ-----KKGQWSQEEYQKLFDLVNMDLR-------MRAL--EEKKTKHGMLR 531
WR V + ++ W+ EE KL DLV R M +L T + R
Sbjct: 367 WRFVVGTSTQETIDRRKLWTNEEEAKLLDLVKSSYRSSFHTKKMTSLFTHNNHTTSNIQR 426
Query: 532 -----DNISWEAISDKLATRSNAIC 551
D+I+W +IS KL T+S C
Sbjct: 427 EIPASDSIAWHSISKKLGTKSPESC 451
>sp|Q05950|REB1_KLULA DNA-binding protein REB1 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=REB1 PE=3 SV=2
Length = 595
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 373 GKRFSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCRSHPEVKHCWKEIGSALPWRPYDS 432
GK F + E+E +++ + Y + GL + + + W I LP+R S
Sbjct: 265 GKSFDESEEEALEQFIKEYQKIRGLSRRQICERIWSNERRK-DDFWTNICRVLPYRTRSS 323
Query: 433 IY----YRAHIIFQRDENRKWTPEE-LELVRKFHEKHGSNWKMLANALGKHRFHVKDAWR 487
IY + HI QR KWTPEE EL R EK G W + LG+ +D WR
Sbjct: 324 IYKHVRRKYHIFEQRG---KWTPEEDAELARWCAEKEG-QWSNIGKVLGRMPEDCRDRWR 379
Query: 488 R-VRL-PNQKKGQWSQEEYQKLFDLVNMDL 515
V+ PN+ +WS EE +KL ++++ L
Sbjct: 380 NYVKCGPNRAANKWSVEEEEKLKNVIHQML 409
>sp|Q15361|TTF1_HUMAN Transcription termination factor 1 OS=Homo sapiens GN=TTF1 PE=1
SV=3
Length = 905
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 371 VRGKRFSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCRSHPEVKHCWKEIGSALPWR-- 428
++ +FS +E++ +++ V +++ G+ E + +L+ +PE K + +R
Sbjct: 534 IKFGKFSVKENKQLEKNVEDFLALTGI--ESADKLLYTDRYPEEKSVITNLKRRYSFRLH 591
Query: 429 -------PYDSIYYRAHIIFQRDENR-KWTPEELELVRKFHEKHGSNWKMLANALGKHRF 480
P+ IYYRA +F + + +++ + E ++ +H G++WK + + +
Sbjct: 592 IGRNIARPWKLIYYRAKKMFDVNNYKGRYSEGDTEKLKMYHSLLGNDWKTIGEMVARSSL 651
Query: 481 HVKDAWRRVRLPNQK-KGQWSQEEYQKLFDLVN-MDLRMRALEEKKTKHGMLRDN----- 533
V A + ++ +Q+ +G WS+ E +KL V + L+ + +E K L++N
Sbjct: 652 SV--ALKFSQISSQRNRGAWSKSETRKLIKAVEEVILKKMSPQELKEVDSKLQENPESCL 709
Query: 534 ----------ISWEAISDKLATRSNAICCMKWYDQLTSPM 563
ISW + K+ TR+ C KW + LT M
Sbjct: 710 SIVREKLYKGISWVEVEAKVQTRNWMQCKSKWTEILTKRM 749
>sp|P52551|MYBB_XENLA Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2
Length = 743
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 22/120 (18%)
Query: 445 ENR---KWTPEELELVRKFHEKHGSN-WKMLANALG-KHRFHVKDAWRRVRLPNQKKGQW 499
ENR KWTPEE E ++ +KHG WK +A+ L + + W RV P+ KG W
Sbjct: 27 ENRVKVKWTPEEDETLKALVKKHGQGEWKTIASNLNNRTEQQCQHRWLRVLHPDLVKGPW 86
Query: 500 SQEEYQKLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++EE +K+ +LV ++ TKH W I+ +L R C +W++ L
Sbjct: 87 TKEEDEKVIELV---------KKYGTKH--------WTLIAKQLRGRMGKQCRERWHNHL 129
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 31/135 (22%)
Query: 375 RFSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCRSHPEVKHCWKEIGSALPWRPYDSIY 434
+++ EEDE +K V + HG GE WK I S L R
Sbjct: 33 KWTPEEDETLKALV----KKHGQGE------------------WKTIASNLNNRTEQQCQ 70
Query: 435 YRAHIIFQRDENR-KWTPEE----LELVRKFHEKHGSNWKMLANAL-GKHRFHVKDAWRR 488
+R + D + WT EE +ELV+K+ KH W ++A L G+ ++ W
Sbjct: 71 HRWLRVLHPDLVKGPWTKEEDEKVIELVKKYGTKH---WTLIAKQLRGRMGKQCRERWHN 127
Query: 489 VRLPNQKKGQWSQEE 503
P KK W++EE
Sbjct: 128 HLNPEVKKSSWTEEE 142
>sp|Q54TN2|MYBC_DICDI Myb-like protein C OS=Dictyostelium discoideum GN=mybC PE=1 SV=1
Length = 580
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 21/122 (17%)
Query: 443 RDENRKWTPEELE-LVRKFHEKHGSNWKMLANALGKHRFHVKDA--WRRVRLPNQKKGQW 499
R+ KW EE + L++ HE WK +A+ +G + + A W+RV P +KG W
Sbjct: 376 RNPPNKWAKEESQKLIQLVHEHGDKQWKKIAHQIGGGKTGAQCAQHWKRVLCPAIRKGSW 435
Query: 500 SQEEYQKLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++E KLF+LV KHG SW+ ++ ++ TR++ C +++
Sbjct: 436 DEDEESKLFNLVE-------------KHGQ-----SWKNVASEIRTRTDIQCRYQYFKSC 477
Query: 560 TS 561
S
Sbjct: 478 MS 479
>sp|Q9P6H9|REB1_SCHPO DNA-binding protein reb1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=reb1 PE=3 SV=1
Length = 504
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 376 FSKEEDEMIKRAVMNYIETHGLGE-EGLNMVLHCRSHPEVKHCWKEIGSALPWRPYDSIY 434
F +E +I + V N+I G E + N + + ++ + + L R SIY
Sbjct: 241 FGVQETAIISQEVHNFIMDQGWSEYQFCNQIWAGKCPKTIRMFYSNLYKKLSHRDAKSIY 300
Query: 435 YRAHIIFQRDENR-KWTPEELELVRKFHEKHGSNWKMLANALGKHRFHVKDAWR-RVRLP 492
+ + E+R W+ EE E +RK +HG W + + + +D WR VR
Sbjct: 301 HHVRRAYNPFEDRCVWSKEEDEELRKNVVEHGKCWTKIGRKMARMPNDCRDRWRDVVRFG 360
Query: 493 NQ-KKGQWSQEEYQKLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAIC 551
++ K+ WS EE +L +V +LR R E+ L +I+W ++ L TR+ C
Sbjct: 361 DKLKRNAWSLEEETQLLQIV-AELRNR--ED-------LSSDINWTLVAQMLGTRTRLQC 410
Query: 552 CMKWYDQLT 560
K + QLT
Sbjct: 411 RYK-FQQLT 418
>sp|Q54CT1|MYBN_DICDI Myb-like protein N OS=Dictyostelium discoideum GN=mybN PE=3 SV=1
Length = 577
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 443 RDENRKWTPEEL-ELVRKFHEKHGSNWKMLANALGKHRFHVKDA--WRRVRLPNQKKGQW 499
R+ KWT EE +L+ HE WK +A +G + + A W+RV P +KG W
Sbjct: 411 RNPPNKWTKEESSKLITLVHENGDKQWKKIALQIGGGKTGAQCAQHWKRVLCPAIRKGSW 470
Query: 500 SQEEYQKLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWY 556
+EE KLF LV KHG SW+ ++ ++ TR++ C +++
Sbjct: 471 DEEEEAKLFLLVE-------------KHGQ-----SWKNVASEIRTRTDIQCRYQYF 509
>sp|P51960|MYBA_MOUSE Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2
Length = 751
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 448 KWTPEELELVRKFHEKHGSN-WKMLANAL-GKHRFHVKDAWRRVRLPNQKKGQWSQEEYQ 505
KWT +E + ++K E+HG++ W ++A+ L + F + W++V P KG W++EE Q
Sbjct: 37 KWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQKVLNPELIKGPWTKEEDQ 96
Query: 506 KLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++ +LV K+G R W I+ L R C +W++ L
Sbjct: 97 RVIELVQ-------------KYGPKR----WSLIAKHLKGRIGKQCRERWHNHL 133
>sp|P10243|MYBA_HUMAN Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2
Length = 752
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 448 KWTPEELELVRKFHEKHGSN-WKMLANAL-GKHRFHVKDAWRRVRLPNQKKGQWSQEEYQ 505
KWT +E + ++K E+HG++ W ++A+ L + F + W++V P KG W++EE Q
Sbjct: 37 KWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQKVLNPELIKGPWTKEEDQ 96
Query: 506 KLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++ +LV K+G R W I+ L R C +W++ L
Sbjct: 97 RVIELVQ-------------KYGPKR----WSLIAKHLKGRIGKQCRERWHNHL 133
>sp|O15816|MYBB_DICDI Myb-like protein B OS=Dictyostelium discoideum GN=mybB PE=2 SV=2
Length = 711
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 443 RDENRKWTPEELE-LVRKFHEKHGSNWKMLANALGKHRFHVKDA--WRRVRLPNQKKGQW 499
R KWT EE + L++ E WK +A LG + + A W+RV P KKG W
Sbjct: 436 RSPPNKWTKEESQNLIKLVTENGDKQWKKIATKLGGGKTGAQCAQHWKRVLSPEIKKGSW 495
Query: 500 SQEEYQKLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
+ E + LF LV+ KHG SW+ ++ ++ TR++ C +++ +
Sbjct: 496 DEAEEELLFQLVD-------------KHGQ-----SWKNVAIEIKTRTDIQCRYQYFKAI 537
Query: 560 TS 561
S
Sbjct: 538 MS 539
>sp|Q9S7G7|MB3R1_ARATH Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2
SV=1
Length = 776
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 442 QRDENRKWTPEELELVRKFHEK-HGSNWKMLANALGKHRFHVKDA--WRRVRLPNQKKGQ 498
+R +WTPEE E++ K E+ G NWK +A K R V+ W++V P KG
Sbjct: 31 RRSTKGQWTPEEDEVLCKAVERFQGKNWKKIAECF-KDRTDVQCLHRWQKVLNPELVKGP 89
Query: 499 WSQEEYQKLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQ 558
WS+EE + DLV K+G + W IS L R C +W++
Sbjct: 90 WSKEEDNTIIDLVE-------------KYGPKK----WSTISQHLPGRIGKQCRERWHNH 132
Query: 559 L 559
L
Sbjct: 133 L 133
>sp|P21538|REB1_YEAST DNA-binding protein REB1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=REB1 PE=1 SV=2
Length = 810
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 373 GKRFSKEEDEMIKRAVMNYIETHGLGEEGLNMVLHCRSHPEVKHCWKEIGSALPWRPYDS 432
K F K ED ++R + Y L + + + P+ + W I LP+R S
Sbjct: 402 SKAFDKAEDAALERFINEYEAIERLTRQQVCERIWSSDRPK-DNFWNNIYKVLPYRSSSS 460
Query: 433 IY----YRAHIIFQRDENRKWTP-EELELVRKFHEKHGSNWKMLANALGKHRFHVKDAWR 487
IY + HI QR KWT EE EL + EK G W + LG+ +D WR
Sbjct: 461 IYKHMRRKYHIFEQRG---KWTAEEEQELAKLCAEKEGQ-WAEIGKTLGRMPEDCRDRWR 516
Query: 488 R-VRL-PNQKKGQWSQEEYQKLFDLVNMDLRMRALEEKKTKHGMLRDNI 534
V+ N+ +WS EE ++L V D+ LEE + + L N+
Sbjct: 517 NYVKCGTNRASNRWSVEE-EELLKKVISDM----LEEAQQQQSQLHPNL 560
>sp|Q05935|MYBA_XENLA Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1
Length = 728
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 18/113 (15%)
Query: 448 KWTPEELELVRKFHEKHGSNWKMLA-NALGKHRFHVKDAWRRVRLPNQKKGQWSQEEYQK 506
+WT +E + V+K EKHG +W ++A + + + + W +V P KG W++EE Q+
Sbjct: 37 RWTKDEDDKVKKLVEKHGEDWGVVARHFINRSEVQCQHRWHKVLSPELVKGPWTKEEDQR 96
Query: 507 LFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
+ +LV+ K+G + W I+ L R C +W++ L
Sbjct: 97 VIELVH-------------KYGPKK----WSIIAKHLKGRIGKQCRERWHNHL 132
>sp|P06876|MYB_MOUSE Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2
Length = 636
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 448 KWTPEELELVRKFHEKHGSN-WKMLANAL-GKHRFHVKDAWRRVRLPNQKKGQWSQEEYQ 505
+WT EE E ++K E++G++ WK++AN L + + W++V P KG W++EE Q
Sbjct: 42 RWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQ 101
Query: 506 KLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++ +LV K+G R W I+ L R C +W++ L
Sbjct: 102 RVIELVQ-------------KYGPKR----WSVIAKHLKGRIGKQCRERWHNHL 138
>sp|P46200|MYB_BOVIN Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1
Length = 640
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 448 KWTPEELELVRKFHEKHGSN-WKMLANAL-GKHRFHVKDAWRRVRLPNQKKGQWSQEEYQ 505
+WT EE E ++K E++G++ WK++AN L + + W++V P KG W++EE Q
Sbjct: 42 RWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQ 101
Query: 506 KLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++ +LV K+G R W I+ L R C +W++ L
Sbjct: 102 RVIELVQ-------------KYGPKR----WSVIAKHLKGRIGKQCRERWHNHL 138
>sp|P10242|MYB_HUMAN Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2
Length = 640
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 448 KWTPEELELVRKFHEKHGSN-WKMLANAL-GKHRFHVKDAWRRVRLPNQKKGQWSQEEYQ 505
+WT EE E ++K E++G++ WK++AN L + + W++V P KG W++EE Q
Sbjct: 42 RWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQ 101
Query: 506 KLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++ +LV K+G R W I+ L R C +W++ L
Sbjct: 102 RVIELVQ-------------KYGPKR----WSVIAKHLKGRIGKQCRERWHNHL 138
>sp|P52550|MYBA_CHICK Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1
Length = 757
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 19/114 (16%)
Query: 448 KWTPEELELVRKFHEKHGSN-WKMLANAL-GKHRFHVKDAWRRVRLPNQKKGQWSQEEYQ 505
KWT +E E ++K E++G++ W +A+ L + F + W++V P KG W++EE Q
Sbjct: 37 KWTRDEDEKLKKLVEQNGTDDWAFIASHLQNRSDFQCQHRWQKVLNPELIKGPWTKEEDQ 96
Query: 506 KLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++ +LV K+G R W I+ L R C +W++ L
Sbjct: 97 RVIELVQ-------------KYGPKR----WSLIAKHLKGRIGKQCRERWHNHL 133
>sp|P01103|MYB_CHICK Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=2 SV=1
Length = 641
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 448 KWTPEELELVRKFHEKHGS-NWKMLANAL-GKHRFHVKDAWRRVRLPNQKKGQWSQEEYQ 505
+WT EE E ++K E++G+ +WK++A+ L + + W++V P KG W++EE Q
Sbjct: 42 RWTREEDEKLKKLVEQNGTEDWKVIASFLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQ 101
Query: 506 KLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++ +LV K+G R W I+ L R C +W++ L
Sbjct: 102 RVIELVQ-------------KYGPKR----WSVIAKHLKGRIGKQCRERWHNHL 138
>sp|Q9UUI6|RTF_SCHPO Replication termination factor 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rtf1 PE=1 SV=2
Length = 466
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 448 KWTPEELELVRKFHEKHGSNWKMLANALGKHRFHVKDAWRRVRLPNQ-KKGQWSQEEYQK 506
KWT E+ ++K EKHG++W ++ + H +D WR P + + W+ +E +K
Sbjct: 258 KWTIEDEAELKKLVEKHGTSWSLIGKLSNRLPMHCRDHWRDYIQPGEINRSPWTIQEKEK 317
Query: 507 LFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQLT 560
L VN L+ I W IS + R C K+Y ++
Sbjct: 318 LIKTVNQYLQSNP-----------SSPIQWSLISKNMRNRHRHHCRWKYYTLIS 360
>sp|Q08759|MYB_XENLA Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1
Length = 624
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 448 KWTPEELELVRKFHEKHGSN-WKMLANAL-GKHRFHVKDAWRRVRLPNQKKGQWSQEEYQ 505
+WT EE E ++K E++G+ WK++A+ L + + W++V P KG W++EE Q
Sbjct: 39 RWTREEDEKLKKLVEQNGTEEWKVIASFLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQ 98
Query: 506 KLFDLVNMDLRMRALEEKKTKHGMLRDNISWEAISDKLATRSNAICCMKWYDQL 559
++ +LV+ K+G R W I+ L R C +W++ L
Sbjct: 99 RVIELVH-------------KYGPKR----WSVIAKHLKGRIGKQCRERWHNHL 135
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 225,110,861
Number of Sequences: 539616
Number of extensions: 10740622
Number of successful extensions: 58790
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 2488
Number of HSP's that attempted gapping in prelim test: 43342
Number of HSP's gapped (non-prelim): 10900
length of query: 563
length of database: 191,569,459
effective HSP length: 123
effective length of query: 440
effective length of database: 125,196,691
effective search space: 55086544040
effective search space used: 55086544040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)